Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,085,695	T→C	K581R (AAG→AGG)	frvR ←	putative frv operon regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,085,695	0	T	C	99.7%	1169.7 / ‑7.1	369	K581R (AAG→AGG)	frvR	putative frv operon regulatory protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (202/166); total (203/166)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 375 total aligned reads displayed.

GAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTA  >  NC_000913/4085605‑4085784

 aaaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCtgtg                                                                                       >  1:7183594/1‑93 (MQ=255)

 aaaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCtgtg                                                                                       >  2:7780964/1‑93 (MQ=255)

  aaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGa                                                                                      >  2:4142511/1‑93 (MQ=255)

  aaTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGa                                                                                      <  2:6888217/93‑1 (MQ=255)

   aTGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCCCCCCCTGTGaa                                                                                     <  2:7480868/93‑1 (MQ=255)

     ggTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGt                                                                                   >  2:2779587/1‑93 (MQ=255)

     ggTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGt                                                                                   <  2:5041260/93‑1 (MQ=255)

      gTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTa                                                                                  >  1:3694171/1‑93 (MQ=255)

       ttGATGACTATAATAGCCTGCTTTAAACTTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTaa                                                                                 <  2:3014603/93‑1 (MQ=255)

           tgaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTcc                                                                             >  1:2997240/1‑93 (MQ=255)

            gaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCa                                                                            <  1:6548455/93‑1 (MQ=255)

            gaCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCa                                                                            >  2:7252473/1‑93 (MQ=255)

             aCTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCAt                                                                           <  1:2804600/93‑1 (MQ=255)

              cTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTTACCCCCTGTGAAGTAACTCCATa                                                                          >  2:5371022/1‑93 (MQ=255)

              cTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATa                                                                          >  1:873788/1‑93 (MQ=255)

              cTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATa                                                                          >  1:7569753/1‑93 (MQ=255)

              cTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATa                                                                          >  1:1439190/1‑93 (MQ=255)

                ataataTCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGAGGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATaaa                                                                        <  2:4738824/93‑1 (MQ=255)

                ataataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATaaa                                                                        >  1:251558/1‑93 (MQ=255)

                ataataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGG‑GCAATCCGCCACAGTTCACCCCCTGTGAAGTAACTCCATaaa                                                                        <  2:2087844/93‑1 (MQ=255)

                 taataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAAt                                                                       <  1:4801426/93‑1 (MQ=255)

                 taataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAAt                                                                       <  2:5861394/93‑1 (MQ=255)

                 taataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGCAACTCCATaaaa                                                                       >  2:6033185/1‑92 (MQ=255)

                  aataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATg                                                                      >  1:2479521/1‑93 (MQ=255)

                   ataGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGc                                                                     >  1:1978396/1‑93 (MQ=255)

                      gCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTc                                                                  >  1:2609151/1‑93 (MQ=255)

                       ccTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCa                                                                 >  2:4517311/1‑93 (MQ=255)

                         tGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCata                                                               <  2:7897143/93‑1 (MQ=255)

                           cGTTAACCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATc                                                             <  1:2188137/93‑1 (MQ=255)

                           cGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATc                                                             >  1:5799757/1‑93 (MQ=255)

                            gTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATcc                                                            >  1:1256700/1‑93 (MQ=255)

                            gTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATcc                                                            >  2:104625/1‑93 (MQ=255)

                                aaCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt                                                        >  1:434213/1‑93 (MQ=255)

                                aaCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt                                                        >  2:1355567/1‑93 (MQ=255)

                                aaCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGtt                                                        >  2:1895774/1‑93 (MQ=255)

                                 aCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTa                                                       >  2:67390/1‑93 (MQ=255)

                                   gTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAc                                                     >  1:6869858/1‑93 (MQ=255)

                                   gTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAc                                                     >  2:3661244/1‑93 (MQ=255)

                                     ttttGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAccc                                                   >  1:3162692/1‑93 (MQ=255)

                                          atgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaa                                              <  1:2373715/93‑1 (MQ=255)

                                           tgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaat                                             >  1:5998352/1‑93 (MQ=255)

                                           tgatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaat                                             >  2:1538536/1‑93 (MQ=255)

                                            gatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaata                                            >  1:1780673/1‑93 (MQ=255)

                                            gatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaata                                            <  1:2134724/93‑1 (MQ=255)

                                            gatAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaata                                            <  1:7289406/93‑1 (MQ=255)

                                             atAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa                                           >  2:854611/1‑93 (MQ=255)

                                             atAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCaataa                                           <  1:3450280/93‑1 (MQ=255)

                                                aaTGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtct                                        >  1:5116211/1‑93 (MQ=255)

                                                aaTGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtct                                        >  2:1644429/1‑93 (MQ=255)

                                                 aTGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtctc                                       >  1:7730473/1‑93 (MQ=255)

                                                 aTGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtctc                                       >  1:633725/1‑93 (MQ=255)

                                                 aTGCAGTGTCGGATGCGGCGC‑ATCCGACACAGCTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAtctc                                       >  1:1112051/1‑93 (MQ=255)

                                                  tGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTcc                                      <  2:594295/93‑1 (MQ=255)

                                                  tGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTcc                                      >  2:145436/1‑93 (MQ=255)

                                                   gCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccg                                     >  2:3511701/1‑93 (MQ=255)

                                                      gtgtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTccgccg                                  <  1:7682289/93‑1 (MQ=255)

                                                       tgtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCgg                                 >  1:3822249/1‑93 (MQ=255)

                                                       tgtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCgg                                 >  2:4613855/1‑93 (MQ=255)

                                                        ttCGGATGCGCCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa                                <  1:3315676/92‑1 (MQ=255)

                                                        gtCGGGTGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa                                >  2:7692043/1‑93 (MQ=255)

                                                        gtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa                                <  1:6700954/93‑1 (MQ=255)

                                                        gtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa                                >  2:6400392/1‑93 (MQ=255)

                                                        gtCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGa                                >  1:4726912/1‑93 (MQ=255)

                                                          cGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATg                              >  1:3584847/1‑93 (MQ=255)

                                                           ggATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGc                             >  2:3989837/1‑93 (MQ=255)

                                                           ggATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGc                             <  1:4881549/93‑1 (MQ=255)

                                                            gATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCt                            >  2:6357723/1‑93 (MQ=255)

                                                               gcggcgC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGac                         <  1:6229930/93‑1 (MQ=255)

                                                               gcggcgC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGac                         >  2:509279/1‑93 (MQ=255)

                                                                cggcgC‑ATCCCACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGaca                        <  2:2535473/93‑1 (MQ=255)

                                                                   gcgcaTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGAcaca                      >  2:231442/5‑93 (MQ=255)

                                                                     gcaTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAat                    >  1:3974607/3‑93 (MQ=255)

                                                                     gcaTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAat                    >  2:1118738/3‑93 (MQ=255)

                                                                     gcaTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAat                    >  1:7415394/3‑93 (MQ=255)

                                                                      caTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAata                   >  2:4885382/2‑93 (MQ=255)

                                                                      caTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAata                   <  2:575448/92‑1 (MQ=255)

                                                                       aTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAatat                  >  2:4378254/1‑93 (MQ=255)

                                                                       aTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAatat                  <  1:5254130/93‑1 (MQ=255)

                                                                       aTCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAatat                  >  2:2829351/1‑93 (MQ=255)

                                                                        tCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATg                 >  1:5451340/1‑93 (MQ=255)

                                                                        tCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATg                 >  2:5587093/1‑93 (MQ=255)

                                                                        tCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATg                 >  1:4190319/1‑93 (MQ=255)

                                                                          cgcaacaGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCt               <  1:1823673/89‑1 (MQ=255)

                                                                          cGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCt               <  2:7310503/93‑1 (MQ=255)

                                                                          cGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCt               >  1:1079055/1‑93 (MQ=255)

                                                                          cGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCt               <  1:449218/93‑1 (MQ=255)

                                                                           gACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCtt              <  2:6532640/93‑1 (MQ=255)

                                                                              acaGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGcc           >  2:6131159/1‑93 (MQ=255)

                                                                              acaGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGcc           >  2:3761331/1‑93 (MQ=255)

                                                                                aGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAg         >  2:4222001/1‑93 (MQ=255)

                                                                                 gTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGa        <  2:5993022/93‑1 (MQ=255)

                                                                                 gTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGa        <  1:4546166/93‑1 (MQ=255)

                                                                                 gTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGa        <  1:763399/93‑1 (MQ=255)

                                                                                   tCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATa      <  2:243057/93‑1 (MQ=255)

                                                                                   tCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATa      <  2:1957114/93‑1 (MQ=255)

                                                                                   tCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATa      >  1:190929/1‑93 (MQ=255)

                                                                                    cACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAg     <  1:4381562/93‑1 (MQ=255)

                                                                                     cccccCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGc    <  1:6593826/92‑1 (MQ=255)

                                                                                     cccccCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGc    <  1:2549244/92‑1 (MQ=255)

                                                                                       ccccTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTa  >  1:787525/1‑93 (MQ=255)

GAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTA  >  NC_000913/4085605‑4085784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 208 total aligned reads displayed.

ACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAATA  >  NC_000913/4085603‑4085788

ACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGTGGCGC‑ATCCGACACAGTTCACCCCCTG                                                                                             <  SRR4302543.1040136/94‑1 (MQ=60)

ACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTG                                                                                             <  SRR4302543.4140189/94‑1 (MQ=60)

  GAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTG                                                                                           >  SRR4302543.1096799/1‑94 (MQ=60)

  GAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTG                                                                                           <  SRR4302543.492132/94‑1 (MQ=60)

  GAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTG                                                                                           >  SRR4302543.7253300/1‑94 (MQ=60)

   AAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGA                                                                                          >  SRR4302543.6307106/1‑94 (MQ=60)

   AAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGA                                                                                          >  SRR4302543.2461030/1‑94 (MQ=60)

   AAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGA                                                                                          <  SRR4302543.2630265/94‑1 (MQ=60)

       GGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTA                                                                                      >  SRR4302543.7613641/1‑94 (MQ=60)

       GGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTA                                                                                      >  SRR4302543.3726653/1‑94 (MQ=60)

       GGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTA                                                                                      >  SRR4302543.3747535/1‑94 (MQ=60)

        GTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAA                                                                                     >  SRR4302543.409023/1‑94 (MQ=60)

        GTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGACAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAA                                                                                     >  SRR4302543.2837550/1‑94 (MQ=60)

         TTGATGACTATAATAGCCTGCGTTAAACTTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAAC                                                                                    <  SRR4302543.15624/94‑1 (MQ=60)

         TTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAAC                                                                                    >  SRR4302543.7925265/1‑94 (MQ=60)

          TGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACT                                                                                   >  SRR4302543.3801195/1‑94 (MQ=60)

          TGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACT                                                                                   >  SRR4302543.7448222/1‑94 (MQ=60)

          TGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACT                                                                                   >  SRR4302543.5031037/1‑94 (MQ=60)

           GATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTC                                                                                  <  SRR4302543.2521239/94‑1 (MQ=60)

           GATGACTATAATAGCCTGCGTTAAACGCTTTTGATGATAAATGCAGTGTCGGATTCGGCGC‑ATCCGACACAGTTCACCTCCTGTGAAGCAACTC                                                                                  >  SRR4302543.8004977/1‑94 (MQ=60)

            ATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCC                                                                                 >  SRR4302543.3024428/1‑94 (MQ=60)

            ATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCC                                                                                 >  SRR4302543.3944582/1‑94 (MQ=60)

             TGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCA                                                                                >  SRR4302543.1853190/1‑94 (MQ=60)

              GACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCAT                                                                               >  SRR4302543.2323827/1‑94 (MQ=60)

              GACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCAT                                                                               <  SRR4302543.6610096/94‑1 (MQ=60)

              GACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCAT                                                                               <  SRR4302543.6610095/94‑1 (MQ=60)

               ACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATA                                                                              <  SRR4302543.2830256/94‑1 (MQ=60)

               ACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATA                                                                              >  SRR4302543.7641772/1‑94 (MQ=60)

               ACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATA                                                                              >  SRR4302543.1452195/1‑94 (MQ=60)

               ACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATA                                                                              <  SRR4302543.867124/94‑1 (MQ=60)

               ACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATA                                                                              >  SRR4302543.881569/1‑94 (MQ=60)

                CTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAA                                                                             <  SRR4302543.2756013/94‑1 (MQ=60)

                CTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAA                                                                             >  SRR4302543.911067/1‑94 (MQ=60)

                 TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAA                                                                            >  SRR4302543.2380837/1‑94 (MQ=60)

                 TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAA                                                                            >  SRR4302543.620282/1‑94 (MQ=60)

                 TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAA                                                                            >  SRR4302543.253748/1‑94 (MQ=60)

                 TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAA                                                                            >  SRR4302543.4855856/1‑94 (MQ=60)

                 TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAA                                                                            >  SRR4302543.3995899/1‑94 (MQ=60)

                 TATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ACCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAA                                                                            <  SRR4302543.3259043/94‑1 (MQ=60)

                  ATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAAT                                                                           <  SRR4302543.3672253/94‑1 (MQ=60)

                  ATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAAT                                                                           >  SRR4302543.7698471/1‑94 (MQ=60)

                  ATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAAT                                                                           <  SRR4302543.7571904/94‑1 (MQ=60)

                  ATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAAT                                                                           <  SRR4302543.5534309/94‑1 (MQ=60)

                   TAATAGCCTGCGTTAAACGTTTTTGATGATACATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCCCCCCCTGTGAAGTAACTCCATAAATG                                                                          <  SRR4302543.6568295/94‑1 (MQ=60)

                   TAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATG                                                                          <  SRR4302543.4845308/94‑1 (MQ=60)

                   TAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATG                                                                          >  SRR4302543.2501953/1‑94 (MQ=60)

                    AATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGC                                                                         >  SRR4302543.1996130/1‑94 (MQ=60)

                    AATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGC                                                                         >  SRR4302543.3068737/1‑94 (MQ=60)

                    AATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGC                                                                         >  SRR4302543.2810417/1‑94 (MQ=60)

                    AATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATCC                                                                         >  SRR4302543.272842/1‑94 (MQ=60)

                     ATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCC                                                                        >  SRR4302543.591178/1‑94 (MQ=60)

                      TAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCT                                                                       <  SRR4302543.2630662/94‑1 (MQ=60)

                       tacctggcgttaatcttttttgattaaaaatgcagtttcggaggcgccgccccggcCACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCT                                                                       <  SRR4302543.1577382/38‑1 (MQ=60)

                       AGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTC                                                                      >  SRR4302543.2632844/1‑94 (MQ=60)

                       AGCCTGCGTTAAACGTTTTTAATGATAAATGCTGTGTAGGAT‑CGGGCCCATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTC                                                                      <  SRR4302543.6007543/94‑1 (MQ=59)

                        GCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCA                                                                     <  SRR4302543.6392401/94‑1 (MQ=60)

                         CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCAT                                                                    <  SRR4302543.5070420/94‑1 (MQ=60)

                         CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCAT                                                                    >  SRR4302543.3922805/1‑94 (MQ=60)

                         CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCAT                                                                    <  SRR4302543.482853/94‑1 (MQ=60)

                         CCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCAT                                                                    >  SRR4302543.2341612/1‑94 (MQ=60)

                          CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAACTGCCTCATA                                                                   >  SRR4302543.1377935/1‑94 (MQ=60)

                          CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATA                                                                   >  SRR4302543.1842647/1‑94 (MQ=60)

                          CTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCATCATA                                                                   >  SRR4302543.1406816/1‑94 (MQ=60)

                           TGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATAT                                                                  <  SRR4302543.1305196/94‑1 (MQ=60)

                           TGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATAT                                                                  >  SRR4302543.2036841/1‑94 (MQ=60)

                            GCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATC                                                                 >  SRR4302543.5852513/1‑94 (MQ=60)

                            GCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATC                                                                 <  SRR4302543.2531712/94‑1 (MQ=60)

                             CGTTAACCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                <  SRR4302543.2207771/94‑1 (MQ=60)

                             CGTTAACCGTTTTTGATGATAAATGCAGTGTCGGAGGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                <  SRR4302543.4274034/94‑1 (MQ=60)

                             CGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                >  SRR4302543.2975849/1‑94 (MQ=60)

                             CGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                >  SRR4302543.1267953/1‑94 (MQ=60)

                             CGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                >  SRR4302543.7696311/1‑94 (MQ=60)

                             CGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                <  SRR4302543.2490078/94‑1 (MQ=60)

                             CGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                <  SRR4302543.2207770/94‑1 (MQ=60)

                             CGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCC                                                                >  SRR4302543.7168536/1‑94 (MQ=60)

                              GTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCT                                                               <  SRR4302543.6934380/94‑1 (MQ=60)

                              GTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCT                                                               >  SRR4302543.7722145/1‑94 (MQ=60)

                               TTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGTCACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTG                                                              <  SRR4302543.6365480/94‑1 (MQ=60)

                               TTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCGCCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTG                                                              >  SRR4302543.4488696/1‑94 (MQ=60)

                               TTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTG                                                              >  SRR4302543.7781559/1‑94 (MQ=60)

                               TTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTG                                                              >  SRR4302543.7781560/1‑94 (MQ=60)

                               TTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTG                                                              <  SRR4302543.5804098/94‑1 (MQ=60)

                               TTAAACGGTTTTGATGATAAATGCAGTGTCGGATTCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGGAACTCCATAAATGCCTCATATCCTG                                                              >  SRR4302543.4807635/1‑94 (MQ=60)

                                TAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGT                                                             <  SRR4302543.7646060/94‑1 (MQ=60)

                                TAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGT                                                             >  SRR4302543.6223043/1‑94 (MQ=60)

                                TAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGT                                                             >  SRR4302543.4551828/1‑94 (MQ=60)

                                 AACCGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTT                                                            <  SRR4302543.7260268/94‑1 (MQ=60)

                                 AAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTT                                                            >  SRR4302543.438284/1‑94 (MQ=60)

                                 AAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTT                                                            >  SRR4302543.438283/1‑94 (MQ=60)

                                   ACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCTCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAA                                                          >  SRR4302543.3236007/1‑94 (MQ=60)

                                   ACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAA                                                          <  SRR4302543.6615180/94‑1 (MQ=60)

                                    CGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAAC                                                         >  SRR4302543.6934561/1‑94 (MQ=60)

                                     GTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATCTCCTGTTAACC                                                        >  SRR4302543.6837666/1‑94 (MQ=60)

                                     GTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACC                                                        <  SRR4302543.5553853/94‑1 (MQ=60)

                                     GTTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACC                                                        <  SRR4302543.6839736/94‑1 (MQ=60)

                                      TTTTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCC                                                       >  SRR4302543.3191167/1‑94 (MQ=60)

                                        TTTGATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGG                                                     >  SRR4302543.2570302/1‑94 (MQ=60)

                                          TAATGATAAATGCGGTGTCGGAGGCGGCGC‑ATCGGACACAGTTCCCCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCA                                                   <  SRR4302543.4415107/94‑1 (MQ=60)

                                           GATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAA                                                  <  SRR4302543.5332743/94‑1 (MQ=60)

                                            ATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATACATGCCTCATATCCTGTTAACCCGGCAga                                                 >  SRR4302543.2506858/1‑92 (MQ=60)

                                            ATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAAT                                                 <  SRR4302543.2395224/94‑1 (MQ=60)

                                            ATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAAT                                                 <  SRR4302543.259658/94‑1 (MQ=60)

                                            ATGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAAT                                                 >  SRR4302543.6053414/1‑94 (MQ=60)

                                             TGATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATA                                                >  SRR4302543.1796593/1‑94 (MQ=60)

                                              agataagtgcgggctgggatgggccgcATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATA                                                <  SRR4302543.5779873/67‑1 (MQ=60)

                                              TATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAA                                               <  SRR4302543.2153826/94‑1 (MQ=60)

                                              GATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAA                                               <  SRR4302543.7359767/94‑1 (MQ=60)

                                              GATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAA                                               >  SRR4302543.1895221/1‑94 (MQ=60)

                                              GATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAA                                               <  SRR4302543.2128576/94‑1 (MQ=60)

                                              GATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAA                                               >  SRR4302543.6588169/1‑94 (MQ=60)

                                              GATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAA                                               <  SRR4302543.2153827/94‑1 (MQ=60)

                                               ATAAATGCAGTGTCGGATGCGGCGC‑ATTCGTCTCAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                                              <  SRR4302543.662857/94‑1 (MQ=60)

                                               ATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                                              >  SRR4302543.2187101/1‑94 (MQ=60)

                                               ATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                                              >  SRR4302543.4042312/1‑94 (MQ=60)

                                               ATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                                              <  SRR4302543.7968937/94‑1 (MQ=60)

                                               ATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                                              <  SRR4302543.1251417/94‑1 (MQ=60)

                                               ATAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAAT                                              <  SRR4302543.3481175/94‑1 (MQ=60)

                                                TAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATC                                             >  SRR4302543.3542543/1‑94 (MQ=60)

                                                TAAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATC                                             <  SRR4302543.2560653/94‑1 (MQ=60)

                                                 AAATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCT                                            >  SRR4302543.5162492/1‑94 (MQ=60)

                                                  AATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTC                                           >  SRR4302543.7803535/1‑94 (MQ=60)

                                                  AATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTC                                           >  SRR4302543.7276926/1‑94 (MQ=60)

                                                  AATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTC                                           >  SRR4302543.639516/1‑94 (MQ=60)

                                                  AATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGCTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTC                                           >  SRR4302543.1122099/1‑94 (MQ=60)

                                                   ATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCC                                          >  SRR4302543.7169223/1‑94 (MQ=60)

                                                   ATGCAGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCC                                          <  SRR4302543.5115871/94‑1 (MQ=60)

                                                    AGCAGTGTCGGATGCGGC‑CCATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCG                                         <  SRR4302543.1952861/94‑1 (MQ=60)

                                                       AGTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCG                                      <  SRR4302543.784334/94‑1 (MQ=60)

                                                        GTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGG                                     <  SRR4302543.7755063/94‑1 (MQ=60)

                                                        GTGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGG                                     >  SRR4302543.3855960/1‑94 (MQ=60)

                                                         TGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGA                                    >  SRR4302543.4770100/1‑94 (MQ=60)

                                                         TGTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGA                                    >  SRR4302543.4127008/1‑94 (MQ=60)

                                                          TTCGGATGCGCCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   <  SRR4302543.3345596/94‑1 (MQ=60)

                                                          GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   <  SRR4302543.4862737/94‑1 (MQ=60)

                                                          GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   <  SRR4302543.4836911/94‑1 (MQ=60)

                                                          GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   >  SRR4302543.4597486/1‑94 (MQ=60)

                                                          GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   >  SRR4302543.4552610/1‑94 (MQ=60)

                                                          GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   <  SRR4302543.3345597/94‑1 (MQ=60)

                                                          GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   <  SRR4302543.6764191/94‑1 (MQ=60)

                                                          GTCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGAT                                   <  SRR4302543.2409846/94‑1 (MQ=60)

                                                           TCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATG                                  >  SRR4302543.3616506/1‑94 (MQ=60)

                                                           TCGGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATG                                  <  SRR4302543.3406829/94‑1 (MQ=60)

                                                             GGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCT                                >  SRR4302543.5355548/1‑94 (MQ=60)

                                                             GGATGCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCT                                <  SRR4302543.4926037/94‑1 (MQ=60)

                                                                 tcggccgcATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGAC                             <  SRR4302543.5808269/86‑1 (MQ=60)

                                                                 GCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACA                            <  SRR4302543.6288732/94‑1 (MQ=60)

                                                                 GCGGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACA                            <  SRR4302543.4298172/94‑1 (MQ=60)

                                                                   GGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACA                          >  SRR4302543.7386314/1‑94 (MQ=60)

                                                                   GGCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACA                          >  SRR4302543.7504079/1‑94 (MQ=60)

                                                                    GCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAA                         >  SRR4302543.1238257/1‑94 (MQ=60)

                                                                    GCGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAA                         <  SRR4302543.3280305/94‑1 (MQ=60)

                                                                     CGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAAT                        <  SRR4302543.4709013/94‑1 (MQ=60)

                                                                     CGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAAT                        >  SRR4302543.4009840/1‑94 (MQ=60)

                                                                     CGC‑ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAAT                        >  SRR4302543.4563658/1‑94 (MQ=60)

                                                                       gcATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATA                       <  SRR4302543.1101476/92‑1 (MQ=60)

                                                                        CATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT                      >  SRR4302543.3177158/1‑94 (MQ=60)

                                                                        CATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT                      >  SRR4302543.2998550/1‑94 (MQ=60)

                                                                        CATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATAT                      <  SRR4302543.121627/94‑1 (MQ=60)

                                                                         ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATG                     >  SRR4302543.5207478/1‑94 (MQ=60)

                                                                         ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATG                     <  SRR4302543.5301514/94‑1 (MQ=60)

                                                                         ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATG                     >  SRR4302543.4228311/1‑94 (MQ=60)

                                                                         ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATG                     <  SRR4302543.5301515/94‑1 (MQ=60)

                                                                         ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATG                     >  SRR4302543.5500781/1‑94 (MQ=60)

                                                                         ATCCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATG                     >  SRR4302543.6971715/1‑94 (MQ=60)

                                                                           CCGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCT                   >  SRR4302543.1088756/1‑94 (MQ=60)

                                                                            cgcaACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTT                  <  SRR4302543.1840047/90‑1 (MQ=60)

                                                                            CGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTT                  <  SRR4302543.453412/94‑1 (MQ=60)

                                                                            CGACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTT                  <  SRR4302543.3804567/94‑1 (MQ=60)

                                                                              ACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGC                <  SRR4302543.7750688/94‑1 (MQ=60)

                                                                              ACACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGC                <  SRR4302543.7750689/94‑1 (MQ=60)

                                                                               CACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCC               >  SRR4302543.1757186/1‑94 (MQ=60)

                                                                               CACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCC               >  SRR4302543.6680699/1‑94 (MQ=60)

                                                                                ACAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCA              >  SRR4302543.6660809/1‑94 (MQ=60)

                                                                                AAAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCA              <  SRR4302543.3467786/94‑1 (MQ=60)

                                                                                 CAGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAG             <  SRR4302543.7856925/94‑1 (MQ=60)

                                                                                  AGTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGA            <  SRR4302543.1820465/94‑1 (MQ=60)

                                                                                   GTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGAT           <  SRR4302543.1829309/94‑1 (MQ=60)

                                                                                   GTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGAT           <  SRR4302543.4587566/94‑1 (MQ=60)

                                                                                   GTTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGAT           <  SRR4302543.770126/94‑1 (MQ=60)

                                                                                    TTCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATA          >  SRR4302543.192545/1‑94 (MQ=60)

                                                                                     TCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAG         <  SRR4302543.4517253/94‑1 (MQ=60)

                                                                                     TCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAG         <  SRR4302543.3605500/94‑1 (MQ=60)

                                                                                     TCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAG         <  SRR4302543.1952737/94‑1 (MQ=60)

                                                                                     TCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAG         <  SRR4302543.7262193/94‑1 (MQ=60)

                                                                                     TCACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAG         <  SRR4302543.1759320/94‑1 (MQ=60)

                                                                                      CACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTATCCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTCCCAGATAGC        <  SRR4302543.5930523/94‑1 (MQ=60)

                                                                                      CACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGC        >  SRR4302543.3660522/1‑94 (MQ=60)

                                                                                      CACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGC        <  SRR4302543.4421282/94‑1 (MQ=60)

                                                                                       CCCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCT       <  SRR4302543.6655956/94‑1 (MQ=60)

                                                                                       ACCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCT       >  SRR4302543.4498677/1‑94 (MQ=60)

                                                                                        CCCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTA      >  SRR4302543.794453/1‑94 (MQ=60)

                                                                                         CCCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAA     >  SRR4302543.1967589/1‑94 (MQ=60)

                                                                                          CCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAA    <  SRR4302543.6260749/94‑1 (MQ=60)

                                                                                          CCCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAA    >  SRR4302543.3870645/1‑94 (MQ=60)

                                                                                           CCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAAT   <  SRR4302543.7630478/94‑1 (MQ=60)

                                                                                           CCTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAAT   <  SRR4302543.5789118/94‑1 (MQ=60)

                                                                                            CTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAATA  <  SRR4302543.4635115/94‑1 (MQ=60)

                                                                                            CTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAATA  <  SRR4302543.5162131/94‑1 (MQ=60)

                                                                                            CTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAATA  >  SRR4302543.7170860/1‑94 (MQ=60)

                                                                                            CTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAATA  <  SRR4302543.2842999/94‑1 (MQ=60)

ACGAAATGGTTGATGACTATAATAGCCTGCGTTAAACGTTTTTGATGATAAATGCAGTGTCGGATGCGGCGCGATCCGACACAGTTCACCCCTTGTGAAGTAACTCCATAAATGCCTCATATCCTGTTAACCCGGCAATAATCTCCGCCGGATGCTGACACAATATGCTTGCCAGATAGCTAAATA  >  NC_000913/4085603‑4085788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`