Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,173,376	A→G	noncoding (44/76 nt)	thrT →	tRNA‑Thr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,173,376	0	A	G	99.7%	1068.6 / NA	345	noncoding (44/76 nt)	thrT	tRNA‑Thr
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (160/184); total (160/185)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 355 total aligned reads displayed.

CCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT  >  NC_000913/4173286‑4173465

 cAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGt                                                                                        <  1:1132428/93‑1 (MQ=255)

 cAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGt                                                                                        >  1:3739376/1‑93 (MQ=255)

 cAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGt                                                                                        >  1:1839913/1‑93 (MQ=255)

    gCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCgg                                                                                     <  2:4142535/93‑1 (MQ=255)

     cTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGc                                                                                    >  2:484391/1‑93 (MQ=255)

     cTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGc                                                                                    <  1:2207294/93‑1 (MQ=255)

      tgatgaTGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCa                                                                                   <  1:5523438/93‑1 (MQ=255)

       gatgatGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAg                                                                                  >  2:7702514/1‑93 (MQ=255)

         tgatgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGtt                                                                                >  1:3374969/1‑93 (MQ=255)

         tgatgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGtt                                                                                >  2:4254835/1‑93 (MQ=255)

         tgatgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGtt                                                                                >  1:134157/1‑93 (MQ=255)

           atgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCg                                                                              >  1:2484855/1‑93 (MQ=255)

           atgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCg                                                                              >  2:6352627/1‑93 (MQ=255)

            tgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGTTCGGCAGTTCGa                                                                             >  2:3397685/1‑93 (MQ=255)

            tgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGa                                                                             >  2:4566401/1‑93 (MQ=255)

            tgCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGa                                                                             >  1:6141653/1‑93 (MQ=255)

             gCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGaa                                                                            <  2:894967/93‑1 (MQ=255)

              cGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAt                                                                           <  2:7227576/93‑1 (MQ=255)

               gggTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATc                                                                          <  1:3027738/93‑1 (MQ=255)

               ggcttCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATc                                                                          <  2:2878676/90‑1 (MQ=255)

                ggTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCt                                                                         >  1:4166719/1‑93 (MQ=255)

                ggTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCt                                                                         >  1:7914199/1‑93 (MQ=255)

                 gTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTg                                                                        <  1:6968150/93‑1 (MQ=255)

                       ttCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATc                                                                  <  1:2281353/93‑1 (MQ=255)

                         cccGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAg                                                                <  1:3458827/93‑1 (MQ=255)

                          ccGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGc                                                               >  1:6822453/1‑93 (MQ=255)

                             cTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcacc                                                            >  1:3898384/1‑93 (MQ=255)

                              tGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcacca                                                           >  2:1108832/1‑93 (MQ=255)

                               gCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcaccac                                                          <  2:5413173/93‑1 (MQ=255)

                               gCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcaccac                                                          >  2:3579513/1‑93 (MQ=255)

                               gCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGcaccac                                                          <  2:7850421/93‑1 (MQ=255)

                                 ccGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActt                                                        <  2:6068199/93‑1 (MQ=255)

                                 ccGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActt                                                        <  2:1676211/93‑1 (MQ=255)

                                 ccGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGCGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActt                                                        >  2:2565249/1‑93 (MQ=255)

                                   gCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtct                                                      <  1:995758/93‑1 (MQ=255)

                                   gCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtct                                                      <  1:2719540/93‑1 (MQ=255)

                                    cactaaGATTTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGTTGGGGTGGGCAGTTCGAATCTGCCTATCAGCACCActtctt                                                     <  1:7414007/89‑1 (MQ=18)

                                    cTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCActtctt                                                     <  1:633673/93‑1 (MQ=255)

                                     tCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCttt                                                    >  2:6892976/1‑93 (MQ=255)

                                      ccAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCtttt                                                   >  2:7898074/1‑93 (MQ=255)

                                      ccAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCtttt                                                   >  1:3990176/1‑93 (MQ=255)

                                      ccAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCtttt                                                   >  1:7624404/1‑93 (MQ=255)

                                       cAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTtc                                                  >  2:6173854/1‑93 (MQ=255)

                                       cAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTtc                                                  <  2:7755362/93‑1 (MQ=255)

                                        aaGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTtct                                                 >  2:214937/1‑93 (MQ=255)

                                          gATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTctcc                                               <  2:1359262/93‑1 (MQ=255)

                                          gATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTctcc                                               <  1:4584971/93‑1 (MQ=255)

                                            tgtgCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTctcctc                                             >  1:4776623/1‑93 (MQ=255)

                                            agtgCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTctcctc                                             <  1:2384689/92‑1 (MQ=255)

                                              tgCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTccc                                           >  2:3719206/1‑93 (MQ=255)

                                               gCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCt                                          <  1:7779425/93‑1 (MQ=255)

                                               gCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCt                                          <  1:5096528/93‑1 (MQ=255)

                                               gCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTCTCTCCTCCCt                                          <  1:2805140/93‑1 (MQ=255)

                                                 tGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGt                                        >  2:1414610/1‑93 (MQ=255)

                                                 tGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGt                                        >  1:181243/1‑93 (MQ=255)

                                                 tGATATAGCTCAGATGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGt                                        >  1:5228320/1‑93 (MQ=255)

                                                  gATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtt                                       >  2:7124890/1‑93 (MQ=255)

                                                   atatAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGttt                                      >  2:3819880/1‑93 (MQ=255)

                                                    tataGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtttt                                     >  2:1981489/1‑93 (MQ=255)

                                                      taGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtttttt                                   >  2:3216498/1‑93 (MQ=255)

                                                      taGCTCAGTTGGTAGAGCGCACCCTTGGGAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGtttttt                                   >  1:4246817/1‑93 (MQ=255)

                                                       aGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCCCCCTGTTTTTTc                                  <  1:2982091/93‑1 (MQ=255)

                                                        gCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTcc                                 <  1:1471949/93‑1 (MQ=255)

                                                        gCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTcc                                 <  1:6569380/93‑1 (MQ=255)

                                                        gCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTcc                                 >  1:4847489/1‑93 (MQ=255)

                                                        gCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTcc                                 <  2:7381997/93‑1 (MQ=255)

                                                          tCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCtt                               >  1:5686302/1‑93 (MQ=255)

                                                           cAGTTGGTAGAGCGCGCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  1:428939/93‑1 (MQ=255)

                                                           cAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  2:3269620/93‑1 (MQ=255)

                                                           cAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  1:6430233/93‑1 (MQ=255)

                                                           cAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  2:6646952/93‑1 (MQ=255)

                                                           cAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  2:6522307/93‑1 (MQ=255)

                                                           cAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTc                              <  2:2971611/93‑1 (MQ=255)

                                                            aGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCt                             >  1:1961098/1‑93 (MQ=255)

                                                             gTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTg                            <  1:4450640/93‑1 (MQ=255)

                                                              ttGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGt                           <  2:678161/93‑1 (MQ=255)

                                                               tGGTAGAGCGCCCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTACTCCTCCCAGTTTTTTCCTTCTGtt                          <  2:7046177/93‑1 (MQ=25)

                                                                ggTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCACCCCCCTGTTTTTTCCTTCTGttt                         >  1:1642017/1‑93 (MQ=255)

                                                                 gTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTa                        <  2:1839913/93‑1 (MQ=255)

                                                                    gagCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTg                     <  1:1033319/93‑1 (MQ=255)

                                                                     agCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGc                    <  1:7173475/93‑1 (MQ=255)

                                                                      gcgcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCa                   <  2:5968836/93‑1 (MQ=255)

                                                                        gcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAtt                 >  2:5764857/1‑93 (MQ=255)

                                                                        gcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAtt                 >  2:5320197/1‑93 (MQ=255)

                                                                        gcACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAtt                 <  1:4919509/93‑1 (MQ=255)

                                                                           cccTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaa              <  1:6021129/93‑1 (MQ=255)

                                                                           cccTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaa              <  2:2484854/93‑1 (MQ=255)

                                                                           cccTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaa              >  2:2400080/1‑93 (MQ=255)

                                                                              ttGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaacag           >  2:6270659/1‑92 (MQ=255)

                                                                              ttGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaacag           >  2:394693/1‑92 (MQ=255)

                                                                              ttGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaacaa           <  2:450288/93‑1 (MQ=255)

                                                                              ttGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTcaacaa           <  1:7708357/93‑1 (MQ=255)

                                                                                 gTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTc        <  2:5909186/93‑1 (MQ=255)

                                                                                  tAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCg       >  2:1268007/1‑93 (MQ=255)

                                                                                  tAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCg       <  2:4058006/93‑1 (MQ=255)

                                                                                   aaGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCgg      >  2:5163386/1‑93 (MQ=255)

                                                                                    aGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCggg     <  2:3166826/93‑1 (MQ=255)

                                                                                     gggTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAGGTCGGGc    >  2:4837710/1‑93 (MQ=255)

                                                                                      ggTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCa   <  1:878976/93‑1 (MQ=255)

                                                                                      ggTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCa   <  1:1411049/93‑1 (MQ=255)

CCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT  >  NC_000913/4173286‑4173465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTTG  >  NC_000913/4173283‑4173469

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302543.6641878/1‑94 (MQ=60)

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               <  SRR4302543.647311/94‑1 (MQ=60)

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302543.5763533/1‑94 (MQ=60)

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302543.553223/1‑94 (MQ=60)

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302543.3139223/1‑94 (MQ=60)

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGG                                                                                               >  SRR4302543.2220178/1‑94 (MQ=60)

 TTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGG                                                                                              <  SRR4302543.7307867/94‑1 (MQ=60)

 TTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGG                                                                                              >  SRR4302543.4093272/1‑94 (MQ=60)

 TTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGG                                                                                              <  SRR4302543.2050172/94‑1 (MQ=60)

 TTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAACTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGG                                                                                              >  SRR4302543.3757006/1‑94 (MQ=60)

  TCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGG                                                                                             >  SRR4302543.5240357/1‑94 (MQ=60)

   CCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGT                                                                                            >  SRR4302543.3772270/1‑94 (MQ=60)

   CCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGT                                                                                            >  SRR4302543.1856465/1‑94 (MQ=60)

   CCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGT                                                                                            >  SRR4302543.1170242/1‑94 (MQ=60)

    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTC                                                                                           >  SRR4302543.4762279/1‑94 (MQ=60)

    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTC                                                                                           >  SRR4302543.5687610/1‑94 (MQ=60)

    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTC                                                                                           >  SRR4302543.5108925/1‑94 (MQ=60)

    CAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTC                                                                                           <  SRR4302543.1142711/94‑1 (MQ=60)

     AAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCG                                                                                          >  SRR4302543.2724483/1‑94 (MQ=60)

        CTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATCTAGCTCAGTTGGTAGCGCGCACCCTTGGTAAGGGTGGGGTCGGCA                                                                                       >  SRR4302543.3857138/1‑94 (MQ=60)

        CTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCA                                                                                       <  SRR4302543.2227177/94‑1 (MQ=60)

         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      >  SRR4302543.6026301/1‑94 (MQ=60)

         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      >  SRR4302543.1079547/1‑94 (MQ=60)

         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      >  SRR4302543.3378604/1‑94 (MQ=60)

         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      >  SRR4302543.915379/1‑94 (MQ=60)

         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAG                                                                                      <  SRR4302543.5573611/94‑1 (MQ=60)

         TGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGGCGGCAG                                                                                      >  SRR4302543.4885205/1‑94 (MQ=60)

          GATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTGAGGGTGGGGTCGGCAGT                                                                                     <  SRR4302543.262713/94‑1 (MQ=60)

          GATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGT                                                                                     <  SRR4302543.4000981/94‑1 (MQ=60)

          GATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGT                                                                                     >  SRR4302543.549254/1‑94 (MQ=60)

          GATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGCGGGGTCGGCAGT                                                                                     >  SRR4302543.6851020/1‑94 (MQ=60)

           ATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTT                                                                                    >  SRR4302543.3405268/1‑94 (MQ=60)

           ATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTT                                                                                    >  SRR4302543.135347/1‑94 (MQ=60)

            TGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTC                                                                                   >  SRR4302543.2316534/1‑94 (MQ=60)

             GATGGGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCG                                                                                  <  SRR4302543.4172199/94‑1 (MQ=60)

             GATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCG                                                                                  >  SRR4302543.2507360/1‑94 (MQ=60)

              ATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGA                                                                                 >  SRR4302543.6199824/1‑94 (MQ=60)

                GCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAT                                                                               <  SRR4302543.5587677/94‑1 (MQ=60)

                GCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAT                                                                               <  SRR4302543.3259604/94‑1 (MQ=60)

                GCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAAT                                                                               <  SRR4302543.6148986/94‑1 (MQ=60)

                 CGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATC                                                                              <  SRR4302543.2999446/94‑1 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGTTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302543.7706310/94‑1 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302543.818136/94‑1 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302543.3055093/94‑1 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302543.1165016/94‑1 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302543.7060554/94‑1 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             >  SRR4302543.7988547/1‑94 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             <  SRR4302543.1715885/94‑1 (MQ=60)

                  GGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCT                                                                             >  SRR4302543.4204445/1‑94 (MQ=60)

                   GGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTG                                                                            >  SRR4302543.5213289/1‑94 (MQ=60)

                    GTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGC                                                                           <  SRR4302543.7033722/94‑1 (MQ=60)

                     TTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCC                                                                          >  SRR4302543.2280245/1‑94 (MQ=60)

                     TTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCC                                                                          >  SRR4302543.2280243/1‑94 (MQ=60)

                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         <  SRR4302543.6137959/94‑1 (MQ=60)

                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         <  SRR4302543.1774154/94‑1 (MQ=60)

                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         <  SRR4302543.1880356/94‑1 (MQ=60)

                      TCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCT                                                                         <  SRR4302543.4436005/94‑1 (MQ=60)

                       CGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTA                                                                        >  SRR4302543.691356/1‑94 (MQ=60)

                        GATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTAT                                                                       <  SRR4302543.4985959/94‑1 (MQ=60)

                         ATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATC                                                                      >  SRR4302543.7813640/1‑94 (MQ=60)

                          TTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCA                                                                     <  SRR4302543.7369206/94‑1 (MQ=60)

                          TTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCA                                                                     <  SRR4302543.2302203/94‑1 (MQ=60)

                           TCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAG                                                                    <  SRR4302543.5093967/94‑1 (MQ=60)

                            CCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGC                                                                   >  SRR4302543.1526156/1‑94 (MQ=60)

                            CCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGC                                                                   <  SRR4302543.3489812/94‑1 (MQ=60)

                            CCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGC                                                                   >  SRR4302543.6886860/1‑94 (MQ=60)

                             CCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCA                                                                  <  SRR4302543.6609592/94‑1 (MQ=60)

                              CGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCAC                                                                 >  SRR4302543.3167712/1‑94 (MQ=60)

                              CGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCAC                                                                 <  SRR4302543.966845/94‑1 (MQ=60)

                               GCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACC                                                                >  SRR4302543.3932810/1‑94 (MQ=60)

                               GCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACC                                                                <  SRR4302543.2338921/94‑1 (MQ=60)

                                 TGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCAC                                                              >  SRR4302543.2278500/1‑94 (MQ=60)

                                 TGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCAC                                                              <  SRR4302543.3785962/94‑1 (MQ=60)

                                  GCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACT                                                             >  SRR4302543.4147227/1‑94 (MQ=60)

                                  GCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACT                                                             >  SRR4302543.7590928/1‑94 (MQ=60)

                                   CCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTT                                                            <  SRR4302543.7719408/94‑1 (MQ=60)

                                   CCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTT                                                            >  SRR4302543.78504/1‑94 (MQ=60)

                                   CCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTT                                                            >  SRR4302543.6811554/1‑94 (MQ=60)

                                   CCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGGCGGCAGTTCGAATCTGCTTATCAGCACacctt                                                            >  SRR4302543.78503/1‑89 (MQ=60)

                                    CCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTC                                                           >  SRR4302543.4867245/1‑94 (MQ=60)

                                     CGCTCCAGTATGTGCTGAGTTAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCT                                                          <  SRR4302543.6906243/94‑1 (MQ=60)

                                     CGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCT                                                          <  SRR4302543.5466048/94‑1 (MQ=60)

                                     CGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCT                                                          >  SRR4302543.6524/1‑94 (MQ=60)

                                     CGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCT                                                          >  SRR4302543.1638955/1‑94 (MQ=60)

                                      GCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTT                                                         <  SRR4302543.1004556/94‑1 (MQ=60)

                                      GCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTT                                                         <  SRR4302543.2744260/94‑1 (MQ=60)

                                       cactAAGATTTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGTTGGGGTGGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTT                                                        <  SRR4302543.7485136/90‑1 (MQ=60)

                                       CTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTT                                                        <  SRR4302543.7510797/94‑1 (MQ=60)

                                       CTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTT                                                        <  SRR4302543.639464/94‑1 (MQ=60)

                                        TCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTT                                                       >  SRR4302543.4025656/1‑94 (MQ=60)

                                        TCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTT                                                       >  SRR4302543.7696758/1‑94 (MQ=60)

                                        TCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGCGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTT                                                       >  SRR4302543.1115587/1‑94 (MQ=60)

                                         CCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTC                                                      <  SRR4302543.1919928/94‑1 (MQ=60)

                                         CCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTC                                                      >  SRR4302543.1414987/1‑94 (MQ=60)

                                          CAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCT                                                     <  SRR4302543.2807234/94‑1 (MQ=60)

                                          CAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCT                                                     >  SRR4302543.2959588/1‑94 (MQ=60)

                                           AAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTC                                                    <  SRR4302543.1371035/94‑1 (MQ=60)

                                             GATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCT                                                  <  SRR4302543.4626625/94‑1 (MQ=60)

                                             GATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCT                                                  <  SRR4302543.4948733/94‑1 (MQ=60)

                                              ATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGTGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 <  SRR4302543.6445223/94‑1 (MQ=60)

                                              ATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 >  SRR4302543.3555584/1‑94 (MQ=60)

                                              ATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTC                                                 >  SRR4302543.4820279/1‑94 (MQ=60)

                                               AGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCC                                                <  SRR4302543.2406281/94‑1 (MQ=60)

                                                 TGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCT                                              <  SRR4302543.5940775/94‑1 (MQ=60)

                                                 TGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCT                                              >  SRR4302543.2772054/1‑94 (MQ=60)

                                                  GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTG                                             <  SRR4302543.7852785/94‑1 (MQ=60)

                                                  GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTG                                             <  SRR4302543.5142682/94‑1 (MQ=60)

                                                  GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTCTCTCCTCCCTG                                             <  SRR4302543.2830806/94‑1 (MQ=60)

                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            >  SRR4302543.856235/1‑94 (MQ=60)

                                                   CTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            >  SRR4302543.182785/1‑94 (MQ=60)

                                                   CTGATATAGCTCAGATGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGT                                            >  SRR4302543.5275402/1‑94 (MQ=60)

                                                     GATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTT                                          >  SRR4302543.7752913/1‑94 (MQ=60)

                                                      ATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTT                                         <  SRR4302543.4501008/94‑1 (MQ=60)

                                                      ATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTT                                         <  SRR4302543.7115213/94‑1 (MQ=60)

                                                      ATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGCCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGGTTT                                         >  SRR4302543.4955784/1‑94 (MQ=60)

                                                       TATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTT                                        >  SRR4302543.7396775/1‑94 (MQ=60)

                                                        ATAGCTCAGTTGGTAGAGCGCACCCTTGGGAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTT                                       >  SRR4302543.4285352/1‑94 (MQ=60)

                                                          AGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCC                                     >  SRR4302543.4891694/1‑94 (MQ=60)

                                                          AGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCCCCCTGTTTTTTCC                                     <  SRR4302543.3009168/94‑1 (MQ=60)

                                                          AGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCCCCCTGTTTTTTCC                                     <  SRR4302543.3009406/94‑1 (MQ=60)

                                                           GCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCT                                    <  SRR4302543.6631225/94‑1 (MQ=60)

                                                           GCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCT                                    <  SRR4302543.1485207/94‑1 (MQ=60)

                                                           GCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCT                                    >  SRR4302543.6379639/1‑94 (MQ=60)

                                                            CTCAGTTGGTAGCGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTCCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   >  SRR4302543.4311311/1‑94 (MQ=60)

                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCGGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   <  SRR4302543.7914081/94‑1 (MQ=60)

                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   >  SRR4302543.6768324/1‑94 (MQ=60)

                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   >  SRR4302543.6992604/1‑94 (MQ=60)

                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   >  SRR4302543.5697468/1‑94 (MQ=60)

                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTT                                   >  SRR4302543.5738199/1‑94 (MQ=60)

                                                            CTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGGCGGCAGTTCGAATCTGCCTGTCAGCACCACTTCATTTCTCCTCCCCCTTTTTTCCTT                                   >  SRR4302543.4311312/1‑94 (MQ=60)

                                                             TCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGGCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTC                                  >  SRR4302543.3619919/1‑94 (MQ=60)

                                                              CAGTTGGTAGAGCGCGCCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 <  SRR4302543.432957/94‑1 (MQ=60)

                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 >  SRR4302543.1978689/1‑94 (MQ=60)

                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 <  SRR4302543.2037620/94‑1 (MQ=60)

                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 <  SRR4302543.93186/94‑1 (MQ=60)

                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 <  SRR4302543.3022535/94‑1 (MQ=60)

                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 >  SRR4302543.2180472/1‑94 (MQ=60)

                                                              CAGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCT                                 <  SRR4302543.6490819/94‑1 (MQ=60)

                                                               AGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTG                                >  SRR4302543.4217248/1‑94 (MQ=60)

                                                               AGTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTG                                <  SRR4302543.2960714/94‑1 (MQ=60)

                                                                GTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGT                               >  SRR4302543.3867742/1‑94 (MQ=60)

                                                                GTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGT                               <  SRR4302543.6463965/94‑1 (MQ=60)

                                                                GTTGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGT                               <  SRR4302543.4490947/94‑1 (MQ=60)

                                                                GTTGGGAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGT                               <  SRR4302543.6405820/94‑1 (MQ=60)

                                                                  TTGTAGAGCGCCCCCTTGGTAAGGGTGGTGTCCGCAGTTCGAATCTGCCTATCAGCTCCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTT                             <  SRR4302543.2490574/94‑1 (MQ=60)

                                                                  TGGTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCACCCCCCTGTTTTTTCCTTCTGTTT                             >  SRR4302543.1656671/1‑94 (MQ=60)

                                                                    GTAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTAT                           <  SRR4302543.4306052/94‑1 (MQ=60)

                                                                     TAGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATT                          >  SRR4302543.477854/1‑94 (MQ=60)

                                                                      AGAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTG                         <  SRR4302543.1759782/94‑1 (MQ=60)

                                                                       GAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGC                        <  SRR4302543.1042495/94‑1 (MQ=60)

                                                                       GAGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGC                        <  SRR4302543.7914001/94‑1 (MQ=60)

                                                                        AGCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCA                       <  SRR4302543.7243120/94‑1 (MQ=60)

                                                                         GCGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCAT                      <  SRR4302543.6282611/94‑1 (MQ=60)

                                                                          CGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATT                     >  SRR4302543.1292759/1‑94 (MQ=60)

                                                                          CGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATT                     >  SRR4302543.3950940/1‑94 (MQ=60)

                                                                          CGCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGCTTATTGCATT                     <  SRR4302543.1470643/94‑1 (MQ=60)

                                                                           GCACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTC                    <  SRR4302543.4964333/94‑1 (MQ=60)

                                                                           GCACCCCTGGGAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTC                    <  SRR4302543.2437351/94‑1 (MQ=60)

                                                                            CACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCA                   >  SRR4302543.2608845/1‑94 (MQ=60)

                                                                             ACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAA                  >  SRR4302543.726829/1‑94 (MQ=60)

                                                                             ACCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAA                  >  SRR4302543.3446111/1‑94 (MQ=60)

                                                                              CCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAAC                 <  SRR4302543.1456391/94‑1 (MQ=60)

                                                                              CCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAAC                 <  SRR4302543.6076986/94‑1 (MQ=60)

                                                                              CCCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAAC                 <  SRR4302543.6167815/94‑1 (MQ=60)

                                                                               CCTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACA                >  SRR4302543.1839669/1‑94 (MQ=60)

                                                                                CTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAG               <  SRR4302543.4882056/94‑1 (MQ=60)

                                                                                CTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAG               <  SRR4302543.1924082/94‑1 (MQ=60)

                                                                                CTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAG               <  SRR4302543.3425995/94‑1 (MQ=60)

                                                                                CTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCCCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAG               >  SRR4302543.4544257/1‑94 (MQ=60)

                                                                                CTTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCCCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAG               >  SRR4302543.4522930/1‑94 (MQ=60)

                                                                                 TTGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAG              <  SRR4302543.7781278/94‑1 (MQ=60)

                                                                                  TGGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGT             >  SRR4302543.1460920/1‑94 (MQ=60)

                                                                                   GGTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTC            <  SRR4302543.4390643/94‑1 (MQ=60)

                                                                                    GTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCGCCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCG           <  SRR4302543.2339079/94‑1 (MQ=60)

                                                                                    GTAAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAGGTCG           <  SRR4302543.787083/94‑1 (MQ=60)

                                                                                      AAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGG         <  SRR4302543.1843058/94‑1 (MQ=60)

                                                                                      AAGGGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGG         <  SRR4302543.425431/94‑1 (MQ=60)

                                                                                      AAGGGTGGGGTCGGCAGGTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAGGGCGGG         >  SRR4302543.4107889/1‑94 (MQ=60)

                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302543.886783/94‑1 (MQ=60)

                                                                                         GGTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302543.5191329/94‑1 (MQ=60)

                                                                                         GGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCAT      <  SRR4302543.1423803/94‑1 (MQ=60)

                                                                                          GTGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATG     <  SRR4302543.3685277/94‑1 (MQ=60)

                                                                                           TGGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGT    <  SRR4302543.1487563/94‑1 (MQ=60)

                                                                                            GGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAGGTCGGGCATGTT   <  SRR4302543.2102492/94‑1 (MQ=60)

                                                                                            GGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTT   <  SRR4302543.1770288/94‑1 (MQ=60)

                                                                                            GGGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTT   <  SRR4302543.7585590/94‑1 (MQ=60)

                                                                                             GGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAGGTCGGGCATGTTG  <  SRR4302543.4850455/94‑1 (MQ=60)

                                                                                             GGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAGGTCGGGCATGTTG  <  SRR4302543.4850457/94‑1 (MQ=60)

                                                                                             GGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTTG  >  SRR4302543.6745560/1‑94 (MQ=60)

                                                                                             GGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTAGGGCATGTTG  <  SRR4302543.5379026/94‑1 (MQ=60)

CTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTTCTTTTCTCCTCCCTGTTTTTTCCTTCTGTTTATTGCATTCAACAAGTCGGGCATGTTG  >  NC_000913/4173283‑4173469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`