Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,236,786 A→G Y525C (TAC→TGC)  yjbH → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,236,7860AG99.2% 1113.6 / ‑2.4 355Y525C (TAC→TGC) yjbHhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/3);  new base G (190/162);  total (190/165)
Fisher's exact test for biased strand distribution p-value = 9.94e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01

Only 100 of 370 total aligned reads displayed.

TGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG  >  NC_000913/4236696‑4236875
                                                                                          |                                                                                         
 gcgcGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCgg                                                                                        <  1:5166285/93‑1 (MQ=255)
   gcgAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCggtg                                                                                      >  1:7419365/1‑93 (MQ=255)
    cgAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCCACGGCTTCTACGGTCAGGACTGCggtgg                                                                                     >  2:1989152/1‑93 (MQ=255)
    cgAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCggtgg                                                                                     <  1:4421085/93‑1 (MQ=255)
     gAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCggtggt                                                                                    <  2:3424174/93‑1 (MQ=255)
       gTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTa                                                                                  >  1:5943/1‑93 (MQ=255)
        tATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAt                                                                                 >  2:3825966/1‑93 (MQ=255)
         aTGTGCAGACCGATGTCTATGTGAATACCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAtc                                                                                <  1:4696765/93‑1 (MQ=255)
           gtgCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAtctc                                                                              >  1:4480440/1‑93 (MQ=255)
           gtgCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAtctc                                                                              <  1:667637/93‑1 (MQ=255)
             gCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGa                                                                            >  1:6883949/1‑93 (MQ=255)
             gCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGa                                                                            <  2:5123301/93‑1 (MQ=255)
              cAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGaa                                                                           >  1:675261/1‑93 (MQ=255)
                gAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAAc                                                                         <  1:3701736/93‑1 (MQ=255)
                  aCGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCa                                                                       >  1:4627103/1‑93 (MQ=255)
                    gATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATg                                                                     <  2:233312/93‑1 (MQ=255)
                      tGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGtt                                                                   <  1:4967769/93‑1 (MQ=255)
                       gTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGttt                                                                  <  2:2255399/93‑1 (MQ=255)
                        tCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTg                                                                 >  2:3473086/1‑93 (MQ=255)
                          tATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGc                                                               >  2:4263121/1‑93 (MQ=255)
                          tATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGc                                                               <  1:6594027/93‑1 (MQ=255)
                            tgtgAATACCCGGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCgg                                                             <  2:4130641/93‑1 (MQ=255)
                            tgtgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCgg                                                             >  2:7633716/1‑93 (MQ=255)
                            tgtgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCgg                                                             >  2:176412/1‑93 (MQ=255)
                            tgtgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGGCTGCGGCGGATATCTCGAAACCATGTTTGGCgg                                                             >  2:6919437/1‑93 (MQ=255)
                             gtgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGt                                                            >  2:5973212/1‑93 (MQ=255)
                              tgAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTg                                                           <  2:6716545/93‑1 (MQ=255)
                               gAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGc                                                          >  2:3561889/1‑93 (MQ=255)
                               gAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGc                                                          >  2:2368772/1‑93 (MQ=255)
                                 aTAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCgg                                                        >  1:1800645/1‑93 (MQ=255)
                                 aTAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCgg                                                        <  2:2899937/93‑1 (MQ=255)
                                  tAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGTTTATCTCCAAACCATGTTTGGCGGTGCggg                                                       <  2:3984043/93‑1 (MQ=255)
                                  tAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCggg                                                       <  1:5045430/93‑1 (MQ=255)
                                  tAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATATCGAAACCATGTTTGGCGGTGCggg                                                       >  2:3779867/1‑93 (MQ=255)
                                   aaCCTGCAAGCCAACTACTTCCATCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCgggg                                                      <  2:5655524/93‑1 (MQ=255)
                                    aCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCggggg                                                     >  2:3291275/1‑93 (MQ=255)
                                    aCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCggggg                                                     <  1:6412206/93‑1 (MQ=255)
                                    aCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCggggg                                                     >  1:7050288/1‑93 (MQ=255)
                                     ccTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGc                                                    >  1:7903048/1‑93 (MQ=255)
                                      cTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCa                                                   <  1:5693754/93‑1 (MQ=255)
                                       ttcAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGGTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAg                                                  >  2:6995102/3‑93 (MQ=255)
                                       tGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAg                                                  >  2:5942842/1‑93 (MQ=255)
                                        gCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGa                                                 >  1:3791328/1‑93 (MQ=255)
                                        gCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGa                                                 >  1:3383425/1‑93 (MQ=255)
                                         cAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGaa                                                <  1:2363842/93‑1 (MQ=255)
                                         cAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGaa                                                <  2:6579013/93‑1 (MQ=255)
                                           aGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAgt                                              <  1:5385458/93‑1 (MQ=255)
                                             ccAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCGGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAgtgt                                            >  2:4322424/1‑93 (MQ=255)
                                             ccAACTACTTCCAGCATCTGGGCAACGGCTGCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAgtgt                                            <  1:1596608/93‑1 (MQ=255)
                                              cAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGtgtt                                           >  1:954211/1‑93 (MQ=255)
                                              cAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGtgtt                                           <  1:2720360/93‑1 (MQ=255)
                                               aaCTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGtgttg                                          >  1:1060531/1‑93 (MQ=255)
                                               aaCTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGtgttg                                          >  2:1597535/1‑93 (MQ=255)
                                                 ctactTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTa                                        <  1:3295874/93‑1 (MQ=255)
                                                  tactTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTAt                                       >  1:4231575/1‑93 (MQ=255)
                                                  tactTCCAGCATCTGGGCAACGGCTTCGACGGTCCGGTCTGCGGTGGTTATCTCGCGACCATGGTTGGCGATGCGGGGGTCGAAGTGTTGTAt                                       >  1:1266084/1‑93 (MQ=255)
                                                    ctTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCg                                     >  1:7168523/1‑93 (MQ=255)
                                                     ttCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGc                                    >  2:4406847/1‑93 (MQ=255)
                                                      tCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGcc                                   <  1:7728229/93‑1 (MQ=255)
                                                      tCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGcc                                   >  1:7621934/1‑93 (MQ=255)
                                                      tCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGcc                                   <  1:3893751/93‑1 (MQ=255)
                                                         aGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGc                                >  1:2881894/1‑93 (MQ=255)
                                                           cATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTg                              <  2:6850676/93‑1 (MQ=255)
                                                            aTCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTgg                             >  1:201716/1‑93 (MQ=255)
                                                            aTCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTgg                             >  2:319165/1‑93 (MQ=255)
                                                            aTCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTgg                             >  2:7268458/1‑93 (MQ=255)
                                                            aTCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTgg                             <  2:521134/93‑1 (MQ=255)
                                                             tCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGa                            <  2:4783003/93‑1 (MQ=255)
                                                              cTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGAc                           <  1:2999117/93‑1 (MQ=255)
                                                               tGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACa                          >  1:2524770/1‑93 (MQ=255)
                                                                gggCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAg                         <  1:5444118/93‑1 (MQ=255)
                                                                 ggCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGc                        <  2:6329032/93‑1 (MQ=255)
                                                                   cAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCaa                      <  2:1223690/93‑1 (MQ=255)
                                                                     aCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACt                    >  1:4567035/1‑93 (MQ=255)
                                                                     aCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACt                    <  1:1222057/93‑1 (MQ=255)
                                                                     aCGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACt                    <  2:5338411/93‑1 (MQ=255)
                                                                      cGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTg                   <  1:5540497/93‑1 (MQ=255)
                                                                      cGGCCTCTACGGTCAGGCCTGCGGTGGTTATCTAGAAACAATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTg                   <  2:3102826/93‑1 (MQ=255)
                                                                       ggCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTgg                  >  2:4083353/1‑93 (MQ=255)
                                                                       ggCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGAGCGGGGGCAGAAGAGTTGTATCGCCCGCTGGACAGCAACTgg                  >  1:4094313/1‑93 (MQ=255)
                                                                        gCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTggg                 >  1:3168941/1‑93 (MQ=255)
                                                                        gCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTggg                 >  1:711550/1‑93 (MQ=255)
                                                                        gCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTggg                 <  2:2632850/93‑1 (MQ=255)
                                                                        gCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTggg                 >  2:6736015/1‑93 (MQ=255)
                                                                          ttCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCg               >  2:1346597/1‑93 (MQ=255)
                                                                            cTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGtt             >  2:6086717/1‑93 (MQ=255)
                                                                             tACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGttt            <  2:1864252/93‑1 (MQ=255)
                                                                                 gTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTc        >  2:4648465/1‑93 (MQ=255)
                                                                                 gTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTc        <  1:7327258/93‑1 (MQ=255)
                                                                                 gTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTc        <  2:6448121/93‑1 (MQ=255)
                                                                                   cAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTg      >  2:3595372/1‑93 (MQ=255)
                                                                                    cggTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTgg     <  1:11715/92‑1 (MQ=255)
                                                                                     ggTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGa    >  2:5530731/1‑93 (MQ=255)
                                                                                     ggTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGa    <  2:2071520/93‑1 (MQ=255)
                                                                                     ggTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGa    >  2:1487747/1‑93 (MQ=255)
                                                                                     ggTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGa    <  1:140185/93‑1 (MQ=255)
                                                                                     ggTCTGCGGTGATTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGa    <  2:7874344/93‑1 (MQ=255)
                                                                                      gTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAt   >  2:251153/1‑93 (MQ=255)
                                                                                      gTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAt   <  2:7195885/93‑1 (MQ=255)
                                                                                      gTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAt   <  1:6838699/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG  >  NC_000913/4236696‑4236875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCAA  >  NC_000913/4236693‑4236879
                                                                                             |                                                                                             
ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTG                                                                                               >  SRR4302543.7845695/1‑94 (MQ=60)
ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTG                                                                                               >  SRR4302543.2741926/1‑94 (MQ=60)
ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTG                                                                                               >  SRR4302543.1938595/1‑94 (MQ=60)
 TGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGC                                                                                              >  SRR4302543.4302218/1‑94 (MQ=60)
 TGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGC                                                                                              <  SRR4302543.3305334/94‑1 (MQ=60)
  GTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCG                                                                                             <  SRR4302543.3472621/94‑1 (MQ=60)
  GTGCGCGAGTATGTGCAGAACGATGTCTATGTGAACAACCTGCAAGCCAACTACTTCCCGCATCTGGGCAACGACTTCTACGGTCAGGTCTGCG                                                                                             >  SRR4302543.1186067/1‑94 (MQ=60)
    GCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGT                                                                                           <  SRR4302543.5212963/94‑1 (MQ=60)
     CGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTG                                                                                          >  SRR4302543.4488068/1‑94 (MQ=60)
     CGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTG                                                                                          >  SRR4302543.7490532/1‑94 (MQ=60)
     CGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTG                                                                                          <  SRR4302543.3727321/94‑1 (MQ=60)
      GCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGG                                                                                         <  SRR4302543.7440555/94‑1 (MQ=60)
      GCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGG                                                                                         <  SRR4302543.7368658/94‑1 (MQ=60)
      GCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGG                                                                                         >  SRR4302543.222589/1‑94 (MQ=60)
       CGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGT                                                                                        <  SRR4302543.4461154/94‑1 (MQ=60)
       CGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGT                                                                                        >  SRR4302543.2929204/1‑94 (MQ=60)
        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                       <  SRR4302543.6909754/94‑1 (MQ=60)
        GAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTT                                                                                       >  SRR4302543.5544327/1‑94 (MQ=60)
         AGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTA                                                                                      >  SRR4302543.5995/1‑94 (MQ=60)
          GTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAT                                                                                     >  SRR4302543.4185607/1‑94 (MQ=60)
          GTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAT                                                                                     >  SRR4302543.1368751/1‑94 (MQ=60)
          GTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTAT                                                                                     <  SRR4302543.4128149/94‑1 (MQ=60)
           TATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATC                                                                                    >  SRR4302543.7021789/1‑94 (MQ=60)
           TATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATC                                                                                    >  SRR4302543.5447054/1‑94 (MQ=60)
           TATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATC                                                                                    <  SRR4302543.1962213/94‑1 (MQ=60)
           TATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATC                                                                                    >  SRR4302543.1164294/1‑94 (MQ=60)
            ATGTGCAGACCGATGTCTATGTGAATACCCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCT                                                                                   <  SRR4302543.4739657/94‑1 (MQ=60)
             TGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTC                                                                                  >  SRR4302543.4521125/1‑94 (MQ=60)
              GTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCG                                                                                 <  SRR4302543.673781/94‑1 (MQ=60)
               TGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGA                                                                                >  SRR4302543.6948710/1‑94 (MQ=60)
               TGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGA                                                                                >  SRR4302543.7825250/1‑94 (MQ=60)
                GCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAA                                                                               >  SRR4302543.681473/1‑94 (MQ=60)
                  AGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAAC                                                                             >  SRR4302543.5821513/1‑94 (MQ=60)
                  AGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATATCGAAAC                                                                             >  SRR4302543.2668063/1‑94 (MQ=60)
                   GAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACC                                                                            <  SRR4302543.5162877/94‑1 (MQ=60)
                   GAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACC                                                                            <  SRR4302543.2521665/94‑1 (MQ=60)
                   GAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACC                                                                            <  SRR4302543.3734276/94‑1 (MQ=60)
                   GAACGATGTCGATGTGAATAACCTGAAAGCCAACTACTTCCAGCATCTGGGCAACCGCTTCGACGGTCAGGTCTGCGGTGGTTATCTCGAAACC                                                                            <  SRR4302543.2521663/94‑1 (MQ=60)
                    AACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCA                                                                           >  SRR4302543.3830545/1‑94 (MQ=60)
                    AACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCA                                                                           >  SRR4302543.4669151/1‑94 (MQ=60)
                      CGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATG                                                                         >  SRR4302543.4119512/1‑94 (MQ=60)
                      CGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATG                                                                         <  SRR4302543.3655022/94‑1 (MQ=60)
                       GATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGACACCATGT                                                                        >  SRR4302543.4730230/1‑94 (MQ=60)
                       GATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGT                                                                        <  SRR4302543.688803/94‑1 (MQ=60)
                        ATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTT                                                                       >  SRR4302543.289007/1‑94 (MQ=60)
                         TGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTT                                                                      <  SRR4302543.5012988/94‑1 (MQ=60)
                         TGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTT                                                                      <  SRR4302543.5004778/94‑1 (MQ=60)
                         TGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTT                                                                      <  SRR4302543.5350221/94‑1 (MQ=60)
                          GTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTG                                                                     <  SRR4302543.5687152/94‑1 (MQ=60)
                          GTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTG                                                                     <  SRR4302543.125706/94‑1 (MQ=60)
                          GTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTG                                                                     >  SRR4302543.6767935/1‑94 (MQ=60)
                           TCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGG                                                                    <  SRR4302543.6681099/94‑1 (MQ=60)
                            TTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGC                                                                   <  SRR4302543.4474599/94‑1 (MQ=60)
                            CTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGC                                                                   >  SRR4302543.7090736/1‑94 (MQ=60)
                            CTATGTGAATAACCTGCAAGCCAACTACTGCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGC                                                                   <  SRR4302543.5040778/94‑1 (MQ=60)
                             TATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCG                                                                  <  SRR4302543.6656157/94‑1 (MQ=60)
                              ATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGG                                                                 <  SRR4302543.3297712/94‑1 (MQ=60)
                              ATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGG                                                                 >  SRR4302543.17083/1‑94 (MQ=60)
                               TGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGT                                                                <  SRR4302543.7142906/94‑1 (MQ=60)
                                GTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTG                                                               <  SRR4302543.4168290/94‑1 (MQ=60)
                                 TGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGC                                                              >  SRR4302543.3101237/1‑94 (MQ=60)
                                 TGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGC                                                              <  SRR4302543.7259100/94‑1 (MQ=60)
                                  GAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCG                                                             >  SRR4302543.1083644/1‑94 (MQ=60)
                                  GAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCG                                                             <  SRR4302543.7407096/94‑1 (MQ=60)
                                  GAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCG                                                             >  SRR4302543.4468781/1‑94 (MQ=60)
                                   AATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGG                                                            >  SRR4302543.1220768/1‑94 (MQ=60)
                                   AATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGG                                                            >  SRR4302543.1816768/1‑94 (MQ=60)
                                    ATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGG                                                           <  SRR4302543.5665856/94‑1 (MQ=60)
                                    ATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGG                                                           <  SRR4302543.6841085/94‑1 (MQ=60)
                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                          <  SRR4302543.5192318/94‑1 (MQ=60)
                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                          <  SRR4302543.126828/94‑1 (MQ=60)
                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                          >  SRR4302543.693491/1‑94 (MQ=60)
                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                          <  SRR4302543.599927/94‑1 (MQ=60)
                                     TAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGG                                                          <  SRR4302543.5091313/94‑1 (MQ=60)
                                      AACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGG                                                         >  SRR4302543.7118697/1‑94 (MQ=60)
                                      AACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGG                                                         <  SRR4302543.4629576/94‑1 (MQ=60)
                                       ACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGC                                                        <  SRR4302543.6472588/94‑1 (MQ=60)
                                       ACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGC                                                        >  SRR4302543.7977325/1‑94 (MQ=60)
                                       ACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGC                                                        <  SRR4302543.4678656/94‑1 (MQ=60)
                                        CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCA                                                       <  SRR4302543.165461/94‑1 (MQ=60)
                                        CCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCA                                                       >  SRR4302543.1358284/1‑94 (MQ=60)
                                         CTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAG                                                      <  SRR4302543.5745707/94‑1 (MQ=60)
                                         CTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAG                                                      <  SRR4302543.6731532/94‑1 (MQ=60)
                                          TGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGA                                                     >  SRR4302543.3824731/1‑94 (MQ=60)
                                          TGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGA                                                     >  SRR4302543.3413770/1‑94 (MQ=60)
                                            CAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAG                                                   <  SRR4302543.2385275/94‑1 (MQ=60)
                                             AAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTGCGGTCAGGTCTACGGTGGTTATCTCGAAGCCATGTTTGGCGGTGCGGGGGCAGAAGT                                                  <  SRR4302543.3887878/94‑1 (MQ=60)
                                             AAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGT                                                  >  SRR4302543.3927169/1‑94 (MQ=60)
                                             AAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGT                                                  >  SRR4302543.1573068/1‑94 (MQ=60)
                                              AGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTG                                                 <  SRR4302543.5434361/94‑1 (MQ=60)
                                              AGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTG                                                 <  SRR4302543.5434352/94‑1 (MQ=60)
                                               GCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGACACCATGTTTGGCGGCGCGGGGGCAGAAGTGT                                                >  SRR4302543.999481/1‑94 (MQ=60)
                                               GCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGT                                                >  SRR4302543.7213361/1‑94 (MQ=60)
                                               GCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGT                                                <  SRR4302543.6983401/94‑1 (MQ=60)
                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                               >  SRR4302543.2812137/1‑94 (MQ=60)
                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                               <  SRR4302543.3633341/94‑1 (MQ=60)
                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                               >  SRR4302543.6580563/1‑94 (MQ=60)
                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                               >  SRR4302543.962577/1‑94 (MQ=60)
                                                CCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCACGTCTGCGGTGGCTATTTCGAAACCATTTTTGGCGGCGCGGGGGCtggagcttt                                               >  SRR4302543.2516818/1‑85 (MQ=60)
                                                CCAACTACTTCCAGCATCTGGGCAACGGCTGCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTT                                               <  SRR4302543.1610852/94‑1 (MQ=60)
                                                 CAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGGGGTGCGGGGGCAGAAGTGTTG                                              >  SRR4302543.2530855/1‑94 (MQ=60)
                                                 CAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGagcggaagaggtg                                              >  SRR4302543.645901/1‑81 (MQ=60)
                                                 CAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTG                                              <  SRR4302543.2745095/94‑1 (MQ=60)
                                                 CAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTG                                              >  SRR4302543.1070043/1‑94 (MQ=60)
                                                 CAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTG                                              >  SRR4302543.4301065/1‑94 (MQ=60)
                                                  AACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGGAGAAGTGTTGT                                             >  SRR4302543.4531674/1‑94 (MQ=60)
                                                  AACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGT                                             >  SRR4302543.6743915/1‑94 (MQ=60)
                                                  AACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGT                                             >  SRR4302543.2927772/1‑94 (MQ=60)
                                                  AACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGT                                             >  SRR4302543.1505642/1‑94 (MQ=60)
                                                  AACTACTTCCAGCATCTGGGCAAAGGCTTCTACGGTCAGGTATGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGA                                             >  SRR4302543.2669968/1‑94 (MQ=60)
                                                   ACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTA                                            >  SRR4302543.896315/1‑94 (MQ=60)
                                                   ACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTA                                            <  SRR4302543.455826/94‑1 (MQ=60)
                                                    CTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTAT                                           <  SRR4302543.3325609/94‑1 (MQ=60)
                                                    CTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTAT                                           >  SRR4302543.3376476/1‑94 (MQ=60)
                                                    CTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTAT                                           >  SRR4302543.4269963/1‑94 (MQ=60)
                                                    CTACTTCCAGCATCTGGGCAACGGCTTCGACGGTCCGGTCTGCGGTGGTTATCTCGCGACCATGGTTGGCGATGCGGGGGTCGAAGTGTTGTAT                                           >  SRR4302543.1277414/1‑94 (MQ=53)
                                                     TACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATC                                          <  SRR4302543.5412689/94‑1 (MQ=60)
                                                      TCTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCG                                         <  SRR4302543.2656458/94‑1 (MQ=60)
                                                      CCTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCG                                         <  SRR4302543.4794203/94‑1 (MQ=60)
                                                      ACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCG                                         >  SRR4302543.7238142/1‑94 (MQ=60)
                                                       CTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGC                                        >  SRR4302543.6716804/1‑94 (MQ=60)
                                                        TTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCC                                       >  SRR4302543.7694268/1‑94 (MQ=60)
                                                         TCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCC                                      <  SRR4302543.7801275/94‑1 (MQ=60)
                                                         TCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCC                                      <  SRR4302543.3928129/94‑1 (MQ=60)
                                                           CAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGC                                    >  SRR4302543.6656077/1‑94 (MQ=60)
                                                           CAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGC                                    >  SRR4302543.2908120/1‑94 (MQ=60)
                                                            AGCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCT                                   >  SRR4302543.4259676/1‑94 (MQ=60)
                                                             GCATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTG                                  <  SRR4302543.7493966/94‑1 (MQ=60)
                                                              CATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGG                                 >  SRR4302543.203417/1‑94 (MQ=60)
                                                              CATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGG                                 >  SRR4302543.3785812/1‑94 (MQ=60)
                                                              CATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGG                                 >  SRR4302543.7222083/1‑94 (MQ=60)
                                                               ATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGA                                >  SRR4302543.1534308/1‑94 (MQ=60)
                                                               ATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGA                                >  SRR4302543.2441574/1‑94 (MQ=60)
                                                               ATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGA                                >  SRR4302543.2044706/1‑94 (MQ=60)
                                                               ATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGA                                >  SRR4302543.5222512/1‑94 (MQ=60)
                                                               ATCTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGA                                >  SRR4302543.7611756/1‑94 (MQ=60)
                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                              >  SRR4302543.2547731/1‑94 (MQ=60)
                                                                 CTGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACA                              <  SRR4302543.3026313/94‑1 (MQ=60)
                                                                  TGGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAG                             >  SRR4302543.1201458/1‑94 (MQ=60)
                                                                   GGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGC                            <  SRR4302543.5493529/94‑1 (MQ=60)
                                                                   GGGCAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGC                            <  SRR4302543.7795972/94‑1 (MQ=60)
                                                                      CAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAC                         >  SRR4302543.4575581/1‑94 (MQ=60)
                                                                      CAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAC                         <  SRR4302543.5996125/94‑1 (MQ=60)
                                                                      CAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAC                         <  SRR4302543.2917403/94‑1 (MQ=60)
                                                                      CAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAC                         >  SRR4302543.3173279/1‑94 (MQ=60)
                                                                      CAACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAAC                         <  SRR4302543.7213280/94‑1 (MQ=60)
                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                        <  SRR4302543.1618917/94‑1 (MQ=60)
                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                        >  SRR4302543.4608577/1‑94 (MQ=60)
                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                        >  SRR4302543.1233270/1‑94 (MQ=60)
                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                        <  SRR4302543.7633989/94‑1 (MQ=60)
                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                        >  SRR4302543.5766615/1‑94 (MQ=60)
                                                                       AACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACT                        >  SRR4302543.946883/1‑94 (MQ=60)
                                                                        ACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTG                       <  SRR4302543.1233041/94‑1 (MQ=60)
                                                                        ACGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTG                       <  SRR4302543.3126564/94‑1 (MQ=60)
                                                                         CGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGG                      <  SRR4302543.825792/94‑1 (MQ=60)
                                                                         CGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGG                      <  SRR4302543.5590874/94‑1 (MQ=60)
                                                                         CGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGG                      <  SRR4302543.6633357/94‑1 (MQ=60)
                                                                         CGGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGAGCGGGGGCAGAAGAGTTGTATCGCCCGCTGGACAGCAACTGG                      >  SRR4302543.4131050/1‑94 (MQ=60)
                                                                          GGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGG                     >  SRR4302543.515454/1‑94 (MQ=60)
                                                                          GGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGG                     <  SRR4302543.4015121/94‑1 (MQ=60)
                                                                          GGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGG                     >  SRR4302543.3197476/1‑94 (MQ=60)
                                                                          GGCTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGG                     >  SRR4302543.718009/1‑94 (MQ=60)
                                                                            CTTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCG                   >  SRR4302543.3781548/1‑94 (MQ=60)
                                                                            CTTCTACGGTCAGGTCTGCGGTGGTTAGCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCG                   <  SRR4302543.7795882/94‑1 (MQ=60)
                                                                             TTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGT                  >  SRR4302543.997841/1‑94 (MQ=60)
                                                                             TTCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGT                  >  SRR4302543.2267914/1‑94 (MQ=60)
                                                                              TCTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTT                 >  SRR4302543.6266549/1‑94 (MQ=60)
                                                                               CTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTT                >  SRR4302543.5665940/1‑94 (MQ=60)
                                                                               CTACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTT                >  SRR4302543.335069/1‑94 (MQ=60)
                                                                                TACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTG               <  SRR4302543.6852670/94‑1 (MQ=60)
                                                                                 ACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGG              <  SRR4302543.4893814/94‑1 (MQ=60)
                                                                                 ACGGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGG              >  SRR4302543.5465354/1‑94 (MQ=60)
                                                                                   GGTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTC            >  SRR4302543.3216011/1‑94 (MQ=60)
                                                                                    GTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCT           <  SRR4302543.7397798/94‑1 (MQ=60)
                                                                                    GTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCT           <  SRR4302543.7771185/94‑1 (MQ=60)
                                                                                    GTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCT           <  SRR4302543.7300132/94‑1 (MQ=60)
                                                                                    GTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCT           <  SRR4302543.4715529/94‑1 (MQ=60)
                                                                                    GTCAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCT           >  SRR4302543.7138177/1‑94 (MQ=60)
                                                                                      CAGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGG         >  SRR4302543.5058965/1‑94 (MQ=60)
                                                                                       CGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGG        <  SRR4302543.11817/94‑1 (MQ=60)
                                                                                       AGGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGA        >  SRR4302543.4622162/1‑94 (MQ=60)
                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT       <  SRR4302543.1884987/94‑1 (MQ=60)
                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT       <  SRR4302543.4348805/94‑1 (MQ=60)
                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT       <  SRR4302543.7888004/94‑1 (MQ=60)
                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT       >  SRR4302543.5538767/1‑94 (MQ=60)
                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT       <  SRR4302543.3354387/94‑1 (MQ=60)
                                                                                        GGTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGAT       <  SRR4302543.141410/94‑1 (MQ=60)
                                                                                         GTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG      <  SRR4302543.6903247/94‑1 (MQ=60)
                                                                                         GTCTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATG      <  SRR4302543.6903248/94‑1 (MQ=60)
                                                                                           CTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCC    <  SRR4302543.667461/94‑1 (MQ=60)
                                                                                           CTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCC    >  SRR4302543.112919/1‑94 (MQ=60)
                                                                                           CTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCC    >  SRR4302543.5950644/1‑94 (MQ=60)
                                                                                           CTGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGAGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCA    >  SRR4302543.5255051/1‑94 (MQ=60)
                                                                                            TGCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCA   >  SRR4302543.7185471/1‑94 (MQ=60)
                                                                                             GCGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCAA  >  SRR4302543.5498228/1‑94 (MQ=60)
                                                                                             |                                                                                             
ATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCAA  >  NC_000913/4236693‑4236879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: