Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,423,015 A→G D107G (GAC→GGC)  rpsF → 30S ribosomal subunit protein S6

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,423,0150AG99.7% 1160.1 / NA 374D107G (GAC→GGC) rpsF30S ribosomal subunit protein S6
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (189/184);  minor base C (1/0);  total (190/184)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 385 total aligned reads displayed.

CCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCA  >  NC_000913/4422925‑4423104
                                                                                          |                                                                                         
     cGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAgcgc                                                                                    >  1:4794575/1‑93 (MQ=255)
     cGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAgcgc                                                                                    >  1:4583218/1‑93 (MQ=255)
       cTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTATAGCGAAATGCGAGCGCCg                                                                                  >  1:2469389/1‑93 (MQ=255)
        ttCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGt                                                                                 >  2:5070937/1‑93 (MQ=255)
         tCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCTAGCGCCGTg                                                                                >  1:43303/1‑93 (MQ=255)
         tCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTg                                                                                >  1:1213485/1‑93 (MQ=255)
          cAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGa                                                                               <  2:4000162/93‑1 (MQ=255)
           aaCGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAg                                                                              <  1:6117912/93‑1 (MQ=255)
             cGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCg                                                                            <  2:4926832/93‑1 (MQ=255)
               aTGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTc                                                                          >  1:3071777/1‑93 (MQ=255)
                 gCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTcgc                                                                        <  2:7158435/93‑1 (MQ=255)
                   cGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCga                                                                      <  2:3228703/93‑1 (MQ=255)
                    gTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCgat                                                                     >  2:3350474/1‑93 (MQ=255)
                    gTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCgat                                                                     <  2:287844/93‑1 (MQ=255)
                    gTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCCAGCGCCGTGAGCGTCGCgag                                                                     >  2:3663208/1‑92 (MQ=255)
                      tATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCgatga                                                                   >  2:3499109/1‑93 (MQ=255)
                      tATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCgatga                                                                   <  1:1470563/93‑1 (MQ=255)
                        tCCGCAGCATGGTTATGCGTCCCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGAtt                                                                 <  1:5165672/93‑1 (MQ=255)
                          cGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTc                                                               <  1:712679/93‑1 (MQ=255)
                            cagcaTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGc                                                             >  2:4808405/1‑93 (MQ=255)
                             agcaTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCa                                                            <  1:5289515/93‑1 (MQ=255)
                              gcaTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCaa                                                           >  2:5363563/1‑93 (MQ=255)
                              gcaTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCaa                                                           >  2:3025837/1‑93 (MQ=255)
                               caTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCaaa                                                          >  1:6917638/1‑93 (MQ=255)
                                aTGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAAc                                                         >  1:2190139/1‑93 (MQ=255)
                                 tGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACg                                                        >  2:7436821/1‑93 (MQ=255)
                                 tGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACg                                                        >  2:1842011/1‑93 (MQ=255)
                                 tGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAACCGAAAGGCGAGCGCCGTGAGCGTCCGGATGATTTCGCAAAca                                                        >  2:1055075/1‑92 (MQ=255)
                                   gTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGaa                                                      >  1:3497457/1‑93 (MQ=255)
                                   gTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGaa                                                      <  2:6574830/93‑1 (MQ=255)
                                    ttATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGaaa                                                     >  1:3289240/1‑93 (MQ=255)
                                     tATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAc                                                    >  2:4396748/1‑93 (MQ=255)
                                     tATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAc                                                    <  2:132138/93‑1 (MQ=255)
                                     tATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAc                                                    >  1:3368451/1‑93 (MQ=255)
                                     tATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAc                                                    <  1:1993414/93‑1 (MQ=255)
                                      aTGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAcc                                                   <  1:7599595/93‑1 (MQ=255)
                                        gCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGc                                                 <  1:3238637/93‑1 (MQ=255)
                                         cGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCt                                                >  2:1783456/1‑93 (MQ=255)
                                         cGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCt                                                >  2:6321996/1‑93 (MQ=255)
                                          gTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtg                                               <  1:6689226/93‑1 (MQ=255)
                                          gTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtg                                               >  2:6745246/1‑93 (MQ=255)
                                           tACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtga                                              <  1:642636/93‑1 (MQ=255)
                                            aCCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtgat                                             <  2:6929684/93‑1 (MQ=255)
                                              cAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtgatga                                           >  2:1213134/1‑93 (MQ=255)
                                              cAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtgatga                                           <  1:7238381/93‑1 (MQ=255)
                                              cAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCtgatga                                           >  1:4688193/1‑93 (MQ=255)
                                               aaGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTgatgat                                          <  1:1671334/93‑1 (MQ=255)
                                               aaGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTgatgat                                          <  2:2592836/93‑1 (MQ=255)
                                                aGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGatgatg                                         >  2:5288693/1‑93 (MQ=255)
                                                 gCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGc                                        <  1:4908427/93‑1 (MQ=255)
                                                  cACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCt                                       >  1:3740854/1‑93 (MQ=255)
                                                  cACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCt                                       <  1:5937250/93‑1 (MQ=255)
                                                    cGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGa                                     >  1:4276086/1‑93 (MQ=255)
                                                    cGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGa                                     <  2:7107055/93‑1 (MQ=255)
                                                     gCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGaa                                    <  1:1003518/93‑1 (MQ=255)
                                                      cTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAg                                   >  2:6204881/1‑93 (MQ=255)
                                                        gTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCt                                 <  1:2053598/93‑1 (MQ=255)
                                                        gTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCt                                 <  2:2516888/93‑1 (MQ=255)
                                                         ttACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTg                                <  2:1801334/93‑1 (MQ=255)
                                                         ttACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTg                                <  1:7795500/93‑1 (MQ=255)
                                                           aCCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTggg                              <  2:3763224/93‑1 (MQ=255)
                                                            ccGAAGCATCTCCGATGGTTTAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTgggg                             <  1:6236968/93‑1 (MQ=255)
                                                             cGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGa                            <  1:7357999/93‑1 (MQ=255)
                                                             cGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGa                            >  1:4465604/1‑93 (MQ=255)
                                                              gAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGAt                           <  2:5820687/93‑1 (MQ=255)
                                                                agcagcTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTc                         <  2:6102793/93‑1 (MQ=255)
                                                                aGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTc                         <  2:7363596/93‑1 (MQ=255)
                                                                 gCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCt                        <  1:4280826/93‑1 (MQ=255)
                                                                   aTCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGa                      >  2:5725356/1‑93 (MQ=255)
                                                                   aTCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGa                      >  1:5470758/1‑93 (MQ=255)
                                                                    tctcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGaa                     >  1:5555149/1‑93 (MQ=255)
                                                                    tctcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGaa                     >  2:3706776/1‑93 (MQ=255)
                                                                    tctcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGaa                     >  2:7836278/1‑93 (MQ=255)
                                                                    tctcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGaa                     >  1:2702631/1‑93 (MQ=255)
                                                                    tctcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGaa                     >  1:296274/1‑93 (MQ=255)
                                                                    tctcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGaa                     >  1:986875/1‑93 (MQ=255)
                                                                      tcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAaga                   >  2:771841/1‑93 (MQ=255)
                                                                      tcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAaga                   <  2:688867/93‑1 (MQ=255)
                                                                      tcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAaga                   >  2:1516298/1‑93 (MQ=255)
                                                                      tcCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAaga                   >  2:2303210/1‑93 (MQ=255)
                                                                         gATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTa                >  2:3849431/1‑93 (MQ=255)
                                                                          aTGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTaa               <  2:5542032/93‑1 (MQ=255)
                                                                           tGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAt              <  2:4982346/93‑1 (MQ=255)
                                                                           tGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAt              >  1:3677092/1‑93 (MQ=255)
                                                                           tGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAt              <  1:7904538/93‑1 (MQ=255)
                                                                            ggTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAtt             <  1:1764009/93‑1 (MQ=255)
                                                                            ggTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAtt             <  1:4015178/93‑1 (MQ=255)
                                                                            ggTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAtt             <  2:4243793/93‑1 (MQ=255)
                                                                             gTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAttt            >  1:1559319/1‑93 (MQ=255)
                                                                              ttAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTc           >  2:869324/1‑93 (MQ=255)
                                                                               tAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCt          >  2:5487403/1‑93 (MQ=255)
                                                                               tAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCt          >  2:1359505/1‑93 (MQ=255)
                                                                               tAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCt          <  2:4581692/93‑1 (MQ=255)
                                                                                aaaGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCtg         <  2:3459801/93‑1 (MQ=255)
                                                                                  aGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCtgat       <  2:1568346/93‑1 (MQ=255)
                                                                                  aGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCtgat       <  2:216219/93‑1 (MQ=255)
                                                                                     gAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGAc    <  1:5045221/93‑1 (MQ=255)
                                                                                      aaaGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGAcc   >  1:7178026/1‑93 (MQ=255)
                                                                                       aaGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCa  <  1:6842202/93‑1 (MQ=255)
                                                                                       aaGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCa  >  1:5847120/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCA  >  NC_000913/4422925‑4423104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 208 total aligned reads displayed.
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACC  >  NC_000913/4422922‑4423107
                                                                                             |                                                                                            
CTCCCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              <  SRR4302543.3278071/94‑1 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              >  SRR4302543.3112650/1‑94 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              >  SRR4302543.3453862/1‑94 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              >  SRR4302543.3112651/1‑94 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              >  SRR4302543.2031269/1‑94 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              >  SRR4302543.3202641/1‑94 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              <  SRR4302543.3278070/94‑1 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              <  SRR4302543.6145481/94‑1 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              >  SRR4302543.4606485/1‑94 (MQ=60)
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              >  SRR4302543.7139708/1‑94 (MQ=60)
CTACCCTCCCCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGG                                                                                              <  SRR4302543.2830765/94‑1 (MQ=60)
 TACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGC                                                                                             >  SRR4302543.6428117/1‑94 (MQ=60)
 TACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGC                                                                                             <  SRR4302543.4487556/94‑1 (MQ=60)
 TACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGC                                                                                             <  SRR4302543.7183389/94‑1 (MQ=60)
 TACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGC                                                                                             <  SRR4302543.5915609/94‑1 (MQ=60)
  ACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCG                                                                                            <  SRR4302543.7502034/94‑1 (MQ=60)
  ACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCG                                                                                            <  SRR4302543.2628687/94‑1 (MQ=60)
   CCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGA                                                                                           >  SRR4302543.4998258/1‑94 (MQ=60)
       CCGCTTCAACGATGCCGTTATCTGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGC                                                                                       >  SRR4302543.4773457/1‑94 (MQ=60)
       CCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGC                                                                                       >  SRR4302543.4773456/1‑94 (MQ=60)
       CCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGC                                                                                       >  SRR4302543.4838393/1‑94 (MQ=60)
       CCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGC                                                                                       >  SRR4302543.4624866/1‑94 (MQ=60)
       CCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGC                                                                                       >  SRR4302543.4838397/1‑94 (MQ=60)
        CGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCC                                                                                      >  SRR4302543.4049555/1‑94 (MQ=60)
         GCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTATAGCGAAATGCGAGCGCCG                                                                                     >  SRR4302543.2491678/1‑94 (MQ=60)
         GCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCG                                                                                     >  SRR4302543.2368844/1‑94 (MQ=60)
         GCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCG                                                                                     >  SRR4302543.311184/1‑94 (MQ=60)
         GCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCG                                                                                     >  SRR4302543.3560516/1‑94 (MQ=60)
          CTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGT                                                                                    >  SRR4302543.2898826/1‑94 (MQ=60)
          CTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGT                                                                                    >  SRR4302543.554003/1‑94 (MQ=60)
           TTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCTAGCGCCGTG                                                                                   >  SRR4302543.43701/1‑94 (MQ=60)
           TTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTG                                                                                   >  SRR4302543.1224392/1‑94 (MQ=60)
           TTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTG                                                                                   >  SRR4302543.4691871/1‑94 (MQ=60)
           TTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTG                                                                                   >  SRR4302543.632430/1‑94 (MQ=60)
           TTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTAACGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTG                                                                                   >  SRR4302543.5576974/1‑94 (MQ=60)
            TCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGA                                                                                  <  SRR4302543.7256283/94‑1 (MQ=60)
             CAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAG                                                                                 >  SRR4302543.3273384/1‑94 (MQ=60)
              AACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGC                                                                                <  SRR4302543.6175863/94‑1 (MQ=60)
              AACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGC                                                                                <  SRR4302543.5101976/94‑1 (MQ=60)
              AACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGC                                                                                >  SRR4302543.501289/1‑94 (MQ=60)
                 GATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTC                                                                             >  SRR4302543.6729034/1‑94 (MQ=60)
                 GATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTC                                                                             >  SRR4302543.3099406/1‑94 (MQ=60)
                 GATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTC                                                                             <  SRR4302543.463471/94‑1 (MQ=60)
                  ATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCG                                                                            <  SRR4302543.1641477/94‑1 (MQ=60)
                  ATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCG                                                                            >  SRR4302543.3376443/1‑94 (MQ=60)
                   TGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGC                                                                           <  SRR4302543.7587317/94‑1 (MQ=60)
                    GCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCG                                                                          <  SRR4302543.5056928/94‑1 (MQ=60)
                    GCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGAGGGTTAAAGCGAAAGGCGAGCGCCGTGAcggtggcg                                                                          >  SRR4302543.6897318/1‑86 (MQ=60)
                    GCC‑TTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGA                                                                         <  SRR4302543.7024501/94‑1 (MQ=60)
                     CCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGA                                                                         >  SRR4302543.5175573/1‑94 (MQ=60)
                     CCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGA                                                                         >  SRR4302543.4616457/1‑94 (MQ=60)
                     CCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGA                                                                         >  SRR4302543.4334769/1‑94 (MQ=60)
                      CGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGAT                                                                        >  SRR4302543.945890/1‑94 (MQ=60)
                        TTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGA                                                                      <  SRR4302543.5096576/94‑1 (MQ=60)
                         TATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGAT                                                                     <  SRR4302543.1483808/94‑1 (MQ=60)
                           TCCGCAGCATGGTTATGCGTCCCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTT                                                                   <  SRR4302543.5212340/94‑1 (MQ=60)
                           TCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTT                                                                   <  SRR4302543.6098771/94‑1 (MQ=60)
                           TCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTT                                                                   >  SRR4302543.1518474/1‑94 (MQ=60)
                            CCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTC                                                                  <  SRR4302543.6914279/94‑1 (MQ=60)
                            CCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTC                                                                  <  SRR4302543.1596215/94‑1 (MQ=60)
                             CGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCG                                                                 <  SRR4302543.719143/94‑1 (MQ=60)
                             CGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCG                                                                 <  SRR4302543.7203181/94‑1 (MQ=60)
                             CGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCG                                                                 >  SRR4302543.723071/1‑94 (MQ=60)
                             CGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCG                                                                 >  SRR4302543.6610549/1‑94 (MQ=60)
                               CAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCA                                                               <  SRR4302543.3439535/94‑1 (MQ=60)
                                AGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAA                                                              >  SRR4302543.2848090/1‑94 (MQ=60)
                                AGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAA                                                              <  SRR4302543.5337266/94‑1 (MQ=60)
                                 GCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAA                                                             >  SRR4302543.6982672/1‑94 (MQ=60)
                                 GCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAA                                                             >  SRR4302543.5324223/1‑94 (MQ=60)
                                  CATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAAC                                                            >  SRR4302543.2209801/1‑94 (MQ=60)
                                  CATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAAC                                                            <  SRR4302543.3447709/94‑1 (MQ=60)
                                  CATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAAC                                                            <  SRR4302543.6499393/94‑1 (MQ=60)
                                   ATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACG                                                           >  SRR4302543.7298737/1‑94 (MQ=60)
                                   ATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACG                                                           <  SRR4302543.7498193/94‑1 (MQ=60)
                                   ATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACG                                                           <  SRR4302543.4309059/94‑1 (MQ=60)
                                     GGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAA                                                         >  SRR4302543.3528744/1‑94 (MQ=60)
                                     GGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAA                                                         >  SRR4302543.4383983/1‑94 (MQ=60)
                                      GTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAA                                                        <  SRR4302543.5479040/94‑1 (MQ=60)
                                      GTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAA                                                        <  SRR4302543.7349127/94‑1 (MQ=60)
                                      GTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAA                                                        >  SRR4302543.3318924/1‑94 (MQ=60)
                                       TTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAC                                                       >  SRR4302543.3398716/1‑94 (MQ=60)
                                       TTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAC                                                       >  SRR4302543.3398712/1‑94 (MQ=60)
                                       TTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAAC                                                       <  SRR4302543.1759882/94‑1 (MQ=60)
                                        TATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACC                                                      <  SRR4302543.5469518/94‑1 (MQ=60)
                                        TATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACC                                                      <  SRR4302543.2011287/94‑1 (MQ=60)
                                        TATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACC                                                      <  SRR4302543.3271678/94‑1 (MQ=60)
                                        TATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACC                                                      >  SRR4302543.1431950/1‑94 (MQ=60)
                                         ATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCG                                                     <  SRR4302543.7671768/94‑1 (MQ=60)
                                         ATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCG                                                     >  SRR4302543.1145924/1‑94 (MQ=60)
                                           GCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCT                                                   >  SRR4302543.739338/1‑94 (MQ=60)
                                           GCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCT                                                   >  SRR4302543.5246686/1‑94 (MQ=60)
                                           GCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCT                                                   <  SRR4302543.6178852/94‑1 (MQ=60)
                                           GCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCT                                                   <  SRR4302543.3267931/94‑1 (MQ=60)
                                           GCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCT                                                   <  SRR4302543.3680968/94‑1 (MQ=60)
                                             GTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGA                                                 <  SRR4302543.6752368/94‑1 (MQ=60)
                                             GTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGA                                                 >  SRR4302543.1899923/1‑94 (MQ=60)
                                              TACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGAT                                                <  SRR4302543.648504/94‑1 (MQ=60)
                                              TACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGAT                                                <  SRR4302543.4418934/94‑1 (MQ=60)
                                              TACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGAT                                                >  SRR4302543.6115045/1‑94 (MQ=60)
                                                CCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGA                                              >  SRR4302543.4730976/1‑94 (MQ=60)
                                                CCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGACGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGA                                              >  SRR4302543.2302463/1‑94 (MQ=60)
                                                 CAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGAT                                             <  SRR4302543.6885058/94‑1 (MQ=60)
                                                 CAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGAT                                             <  SRR4302543.4403256/94‑1 (MQ=60)
                                                 CAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGAT                                             <  SRR4302543.3388208/94‑1 (MQ=60)
                                                 CAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGAT                                             <  SRR4302543.7308455/94‑1 (MQ=60)
                                                  AAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATG                                            <  SRR4302543.1686316/94‑1 (MQ=60)
                                                  AAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATG                                            <  SRR4302543.6965465/94‑1 (MQ=60)
                                                   AGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGC                                           >  SRR4302543.3085296/1‑94 (MQ=60)
                                                    GCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCT                                          <  SRR4302543.1744802/94‑1 (MQ=60)
                                                    GCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCT                                          <  SRR4302543.4953164/94‑1 (MQ=60)
                                                    GCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCT                                          >  SRR4302543.3773761/1‑94 (MQ=60)
                                                     CACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTG                                         <  SRR4302543.5991566/94‑1 (MQ=60)
                                                     CACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTG                                         >  SRR4302543.7729695/1‑94 (MQ=60)
                                                      ACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGA                                        >  SRR4302543.4314951/1‑94 (MQ=60)
                                                       CGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAA                                       <  SRR4302543.1975235/94‑1 (MQ=60)
                                                       CGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAA                                       >  SRR4302543.6227240/1‑94 (MQ=60)
                                                       CGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGCCGCGACGTTTTCGCAAACGAAACCGCTGATGATGCTGAA                                       >  SRR4302543.6084233/1‑94 (MQ=60)
                                                        GCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAG                                      <  SRR4302543.1012390/94‑1 (MQ=60)
                                                        GCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAG                                      <  SRR4302543.6784441/94‑1 (MQ=60)
                                                        GCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAG                                      <  SRR4302543.3748926/94‑1 (MQ=60)
                                                        GCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAG                                      >  SRR4302543.5978211/1‑94 (MQ=60)
                                                          TGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCT                                    >  SRR4302543.907276/1‑94 (MQ=60)
                                                          TGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCT                                    <  SRR4302543.1495098/94‑1 (MQ=60)
                                                          TGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCT                                    <  SRR4302543.2041642/94‑1 (MQ=60)
                                                           GTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTG                                   <  SRR4302543.2071980/94‑1 (MQ=60)
                                                            TTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGG                                  <  SRR4302543.7868957/94‑1 (MQ=60)
                                                            TTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGG                                  <  SRR4302543.2092073/94‑1 (MQ=60)
                                                            TTACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGG                                  <  SRR4302543.3930895/94‑1 (MQ=60)
                                                            TCACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGG                                  <  SRR4302543.7489462/94‑1 (MQ=60)
                                                              ACCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGG                                >  SRR4302543.6925058/1‑94 (MQ=60)
                                                               CCGAAGCATCTCCGATGGTTTAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGA                               <  SRR4302543.6295825/94‑1 (MQ=60)
                                                               CCGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGA                               >  SRR4302543.4506082/1‑94 (MQ=60)
                                                                CGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGAT                              <  SRR4302543.1663586/94‑1 (MQ=60)
                                                                CGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGAT                              <  SRR4302543.3762646/94‑1 (MQ=60)
                                                                CGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGAT                              >  SRR4302543.3660898/1‑94 (MQ=60)
                                                                CGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGAT                              >  SRR4302543.338694/1‑94 (MQ=60)
                                                                CGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGAT                              <  SRR4302543.5506999/94‑1 (MQ=60)
                                                                CGAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGAT                              <  SRR4302543.7428768/94‑1 (MQ=60)
                                                                 GAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATT                             >  SRR4302543.2601973/1‑94 (MQ=60)
                                                                 GAAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATT                             >  SRR4302543.4264719/1‑94 (MQ=60)
                                                                  AAGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTC                            <  SRR4302543.2653108/94‑1 (MQ=60)
                                                                   AGCATCTCCGATGGTTAAGGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCT                           <  SRR4302543.6373537/94‑1 (MQ=60)
                                                                   AGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCT                           <  SRR4302543.4649651/94‑1 (MQ=60)
                                                                   AGCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCT                           <  SRR4302543.6373536/94‑1 (MQ=60)
                                                                    GCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTG                          <  SRR4302543.4882938/94‑1 (MQ=60)
                                                                    GCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTG                          <  SRR4302543.4319731/94‑1 (MQ=60)
                                                                    GCATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTG                          <  SRR4302543.4319730/94‑1 (MQ=60)
                                                                     CATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGTGATTCTGA                         >  SRR4302543.3113831/1‑94 (MQ=60)
                                                                     CATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGA                         >  SRR4302543.2635490/1‑94 (MQ=60)
                                                                     CATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGA                         >  SRR4302543.5520303/1‑94 (MQ=60)
                                                                      ATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAG                        >  SRR4302543.6987460/1‑94 (MQ=60)
                                                                      ATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAA                        >  SRR4302543.5572713/1‑94 (MQ=60)
                                                                      ATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAA                        >  SRR4302543.5671575/1‑94 (MQ=60)
                                                                      ATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAA                        >  SRR4302543.827343/1‑94 (MQ=60)
                                                                      ATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAA                        >  SRR4302543.2727150/1‑94 (MQ=60)
                                                                      ATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAA                        >  SRR4302543.298929/1‑94 (MQ=60)
                                                                      ATCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAA                        >  SRR4302543.5605674/1‑94 (MQ=60)
                                                                       TCTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAG                       <  SRR4302543.7971630/94‑1 (MQ=60)
                                                                       TCTCCGATGGTGAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAG                       <  SRR4302543.3753945/94‑1 (MQ=60)
                                                                        CTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGA                      >  SRR4302543.1779002/1‑94 (MQ=60)
                                                                        CTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGA                      >  SRR4302543.2882121/1‑94 (MQ=60)
                                                                        CTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGA                      >  SRR4302543.7301894/1‑94 (MQ=60)
                                                                        CTCCGATGGTTAAAGCGAAAGGCGAGCGCCGTGACCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGA                      <  SRR4302543.4876360/94‑1 (MQ=60)
                                                                          CCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGT                    >  SRR4302543.2196134/1‑94 (MQ=60)
                                                                          CCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGT                    <  SRR4302543.4207354/94‑1 (MQ=60)
                                                                          CCGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGT                    <  SRR4302543.737906/94‑1 (MQ=60)
                                                                           CGATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTA                   >  SRR4302543.194709/1‑94 (MQ=60)
                                                                             ATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAT                 >  SRR4302543.788963/1‑94 (MQ=60)
                                                                             ATGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAAT                 >  SRR4302543.3046515/1‑94 (MQ=60)
                                                                              TGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATT                <  SRR4302543.7866604/94‑1 (MQ=60)
                                                                              TGGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATT                <  SRR4302543.7978820/94‑1 (MQ=60)
                                                                               GGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTT               <  SRR4302543.4051039/94‑1 (MQ=60)
                                                                               GGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTT               >  SRR4302543.1573249/1‑94 (MQ=60)
                                                                               GGTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTT               <  SRR4302543.1779778/94‑1 (MQ=60)
                                                                                GTTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTC              <  SRR4302543.1337914/94‑1 (MQ=60)
                                                                                 TTAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCT             <  SRR4302543.3998098/94‑1 (MQ=60)
                                                                                  TAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTG            <  SRR4302543.1543976/94‑1 (MQ=60)
                                                                                  TAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTG            >  SRR4302543.4316125/1‑94 (MQ=60)
                                                                                  TAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTG            <  SRR4302543.5953150/94‑1 (MQ=60)
                                                                                  TAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTG            <  SRR4302543.4356683/94‑1 (MQ=60)
                                                                                  TAAAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTG            >  SRR4302543.4316124/1‑94 (MQ=60)
                                                                                    AAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGAT          <  SRR4302543.562905/94‑1 (MQ=60)
                                                                                    AAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGAT          <  SRR4302543.7821370/94‑1 (MQ=60)
                                                                                    AAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGAT          <  SRR4302543.4520397/94‑1 (MQ=60)
                                                                                    AAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGAT          <  SRR4302543.2119804/94‑1 (MQ=60)
                                                                                    AAGCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGAT          <  SRR4302543.562907/94‑1 (MQ=60)
                                                                                     AGCGAAAGGCGAGCGACGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATG         <  SRR4302543.1058761/94‑1 (MQ=60)
                                                                                      GCGAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGA        >  SRR4302543.3266608/1‑94 (MQ=60)
                                                                                        GAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACC      >  SRR4302543.7247701/1‑94 (MQ=60)
                                                                                        GAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACC      <  SRR4302543.5091100/94‑1 (MQ=60)
                                                                                        GAAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACC      >  SRR4302543.6791663/1‑94 (MQ=60)
                                                                                         AAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCA     >  SRR4302543.5900318/1‑94 (MQ=60)
                                                                                         AAAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCA     >  SRR4302543.1416442/1‑94 (MQ=60)
                                                                                          AAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAA    <  SRR4302543.6906776/94‑1 (MQ=60)
                                                                                          AAGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAA    <  SRR4302543.2326156/94‑1 (MQ=60)
                                                                                           AGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAAC   >  SRR4302543.2734718/1‑94 (MQ=60)
                                                                                           AGGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAAC   >  SRR4302543.2460987/1‑94 (MQ=60)
                                                                                            GGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACC  <  SRR4302543.1354477/94‑1 (MQ=60)
                                                                                            GGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACC  <  SRR4302543.3713043/94‑1 (MQ=60)
                                                                                            GGCGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACC  <  SRR4302543.4504871/94‑1 (MQ=60)
                                                                                             |                                                                                            
CTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAATTTCTGATGACCAACC  >  NC_000913/4422922‑4423107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑