Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,448,541 +C intergenic (+46/‑92) ytfQ → / → ytfR putative LACI‑type transcriptional regulator/YtfR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,448,5411.C100.0% 731.3 / NA 258intergenic (+46/‑92)ytfQ/ytfRputative LACI‑type transcriptional regulator/YtfR
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (152/106);  total (152/106)

Only 100 of 293 total aligned reads displayed.

ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG  >  NC_000913/4448449‑4448623
                                                                                             |                                                                                     
 tACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgc                                                                                       <  2:912985/93‑2 (MQ=255)
 tACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgc                                                                                       >  1:124011/1‑92 (MQ=255)
 tACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgc                                                                                       >  1:3386877/1‑92 (MQ=255)
 tACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGGTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgc                                                                                       >  2:2124876/1‑92 (MQ=255)
            aagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCgg                                                                          <  1:7236198/93‑1 (MQ=37)
            aagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCgg                                                                          >  1:5232036/1‑93 (MQ=37)
             agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGc                                                                         >  1:7341899/1‑93 (MQ=37)
              gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCg                                                                        >  2:4724125/1‑93 (MQ=37)
              gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCg                                                                        >  2:6483612/1‑93 (MQ=37)
               aaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGa                                                                       >  1:6002155/1‑93 (MQ=37)
                aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGAt                                                                      <  1:2440038/93‑1 (MQ=37)
                 ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATg                                                                     >  2:5339996/1‑93 (MQ=37)
                 atAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATg                                                                     <  1:1854015/92‑1 (MQ=37)
                  tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATgg                                                                    >  1:3062856/1‑93 (MQ=37)
                   agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATggg                                                                   >  2:3049534/1‑92 (MQ=37)
                    gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTg                                                                  >  2:3076490/1‑93 (MQ=37)
                    gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTg                                                                  >  1:555944/1‑93 (MQ=37)
                    gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTg                                                                  >  2:7488105/1‑93 (MQ=37)
                    gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTg                                                                  >  2:3682072/1‑93 (MQ=37)
                     agaagaagaAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGc                                                                 >  2:3758707/1‑93 (MQ=37)
                     agaagaagaAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGc                                                                 <  2:1083064/93‑1 (MQ=37)
                      gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCa                                                                >  2:597976/1‑93 (MQ=37)
                      gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCa                                                                >  2:2305972/1‑93 (MQ=37)
                      gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCa                                                                <  1:771801/93‑1 (MQ=37)
                       aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCAc                                                               <  1:3977068/93‑1 (MQ=37)
                        agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACt                                                              >  1:1038437/1‑93 (MQ=37)
                        agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACt                                                              <  1:3833497/93‑1 (MQ=37)
                        agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACt                                                              >  1:4602525/1‑93 (MQ=37)
                        agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACt                                                              <  1:2327270/93‑1 (MQ=37)
                        agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACt                                                              >  2:188809/1‑93 (MQ=37)
                         gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGCTAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTg                                                             >  1:2984298/1‑93 (MQ=37)
                           agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGaa                                                           >  2:7926496/1‑93 (MQ=37)
                           agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGaa                                                           <  1:6466417/93‑1 (MQ=37)
                             aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATCCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGc                                                         <  1:710522/93‑1 (MQ=25)
                              aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGcc                                                        >  1:7466711/1‑93 (MQ=37)
                              aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGcc                                                        <  2:5468116/93‑1 (MQ=37)
                              aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGcc                                                        <  2:6112765/93‑1 (MQ=37)
                              aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGcc                                                        <  1:2178163/93‑1 (MQ=37)
                               aaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCt                                                       <  1:3817306/93‑1 (MQ=37)
                                aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTg                                                      >  2:1541898/1‑93 (MQ=37)
                                 atatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGa                                                     <  2:5096756/93‑1 (MQ=37)
                                 atatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGa                                                     >  1:4745802/1‑93 (MQ=37)
                                 atatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGa                                                     <  2:4031006/93‑1 (MQ=37)
                                  tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGAt                                                    >  1:7195309/1‑93 (MQ=37)
                                  tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGAt                                                    >  2:6578295/1‑93 (MQ=37)
                                  tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCCGCGATGGTGCACTGAAGCCTGAt                                                    >  2:4344637/1‑93 (MQ=37)
                                    tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGc                                                  >  1:7555510/1‑93 (MQ=25)
                                    tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGc                                                  >  2:3321444/1‑93 (MQ=25)
                                    tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGc                                                  >  2:6220307/1‑93 (MQ=25)
                                      gggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCgc                                                >  2:1484466/1‑92 (MQ=25)
                                      gggTATGGGGGTTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAGGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGa                                                <  2:7086388/93‑1 (MQ=21)
                                            tGAGGGTTGCTTTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                          <  1:6696907/93‑1 (MQ=25)
                                            tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                          >  1:2095654/1‑93 (MQ=25)
                                             gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc                                         <  2:3916901/93‑1 (MQ=25)
                                             gAGGGTTGCTATGCCTGATGCCGATGCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc                                         <  1:7786268/93‑1 (MQ=25)
                                              aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                        >  2:4525337/1‑93 (MQ=25)
                                              aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                        >  2:6048445/1‑93 (MQ=25)
                                               gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg                                       >  1:3219828/1‑93 (MQ=25)
                                                ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgc                                      <  1:6813432/93‑1 (MQ=25)
                                                ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgc                                      <  2:2424486/93‑1 (MQ=25)
                                                 gTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgcg                                     >  2:3388860/1‑93 (MQ=25)
                                                  ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt                                    >  2:3407024/1‑93 (MQ=25)
                                                  ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt                                    >  1:6172497/1‑93 (MQ=25)
                                                  ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt                                    >  2:7736296/1‑93 (MQ=25)
                                                    gCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                  <  1:926894/93‑1 (MQ=25)
                                                    gCTATGCCTGATGCCGATTCGTAGGCCGAATAAGGCGCCCGC‑GC‑CGCAGCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                  <  1:3144851/93‑1 (MQ=25)
                                                     cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt                                 >  1:3625221/1‑93 (MQ=25)
                                                      taggCCTGATGCGGTTTCGTAGGCGGGATAGGGCGCCCGC‑GC‑CGCACCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa                                <  2:6936004/90‑1 (MQ=21)
                                                      tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa                                >  1:3553549/1‑93 (MQ=21)
                                                      tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa                                >  2:7290185/1‑93 (MQ=21)
                                                       aTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                               <  1:6621791/93‑1 (MQ=25)
                                                        tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc                              >  1:4535941/1‑93 (MQ=21)
                                                         gCCTGATGCCGATTCGTAGGCCGGATAGGGCGCTCGCCC‑‑CGCATCGGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                             <  2:1575048/93‑1 (MQ=21)
                                                         gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                             <  2:4665575/93‑1 (MQ=21)
                                                         gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                             <  1:6923308/93‑1 (MQ=21)
                                                         gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                             <  2:6402489/93‑1 (MQ=25)
                                                            tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc                          >  2:5750224/1‑93 (MQ=21)
                                                            tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc                          >  1:1338147/1‑93 (MQ=21)
                                                               tGCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTa                       >  2:5852204/1‑93 (MQ=21)
                                                                gCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc                      <  1:5809390/93‑1 (MQ=21)
                                                                gCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc                      <  1:5415723/93‑1 (MQ=18)
                                                                gCCGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc                      >  1:6233847/1‑93 (MQ=21)
                                                                 ccGATTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt                     >  2:6365253/1‑93 (MQ=21)
                                                                  cGATGCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg                    <  2:674921/93‑1 (MQ=18)
                                                                    aTTCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg                  >  2:6904323/1‑93 (MQ=21)
                                                                     ttCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa                 <  2:2720901/93‑1 (MQ=21)
                                                                     ttCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa                 <  1:3281777/93‑1 (MQ=21)
                                                                      tCGTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg                <  1:399698/93‑1 (MQ=21)
                                                                        gTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa              >  1:4349517/1‑93 (MQ=21)
                                                                        gTAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa              <  1:740817/93‑1 (MQ=21)
                                                                         tAGGCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc             <  2:3790887/93‑1 (MQ=21)
                                                                            gCCGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt          <  2:742197/93‑1 (MQ=21)
                                                                              cGGATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt        <  1:1125834/93‑1 (MQ=21)
                                                                               ggATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa       <  2:7625164/93‑1 (MQ=21)
                                                                                gATAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac      >  2:78219/1‑93 (MQ=21)
                                                                                  tAAGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac    >  1:4133565/1‑93 (MQ=25)
                                                                                   aaGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc   <  1:4945423/93‑1 (MQ=25)
                                                                                   aaGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc   >  1:1719559/1‑93 (MQ=25)
                                                                                    aGGCGCTCGC‑GC‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCg  >  2:4267591/1‑93 (MQ=25)
                                                                                    aGGCGCTCG‑‑GCCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCg  <  1:149198/93‑1 (MQ=37)
                                                                                             |                                                                                     
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑‑G‑‑CGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG  >  NC_000913/4448449‑4448623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGG‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  >  NC_000913/4448448‑4448634
                                                                                                 |                                                                                                  
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG                                                                                                    >  SRR4302543.4016154/1‑94 (MQ=60)
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG                                                                                                    >  SRR4302543.5586528/1‑94 (MQ=60)
 ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGC                                                                                                   >  SRR4302543.2326498/1‑94 (MQ=60)
 ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGC                                                                                                   >  SRR4302543.3417244/1‑94 (MQ=60)
 ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGC                                                                                                   >  SRR4302543.125129/1‑94 (MQ=60)
 ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGC                                                                                                   >  SRR4302543.1717866/1‑94 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccg                                                                                               >  SRR4302543.7417549/1‑89 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccg                                                                                               <  SRR4302543.3615205/94‑6 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccg                                                                                               <  SRR4302543.5369561/94‑6 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccg                                                                                               >  SRR4302543.5014075/1‑89 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccg                                                                                               >  SRR4302543.420191/1‑89 (MQ=60)
     CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGGATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgacg                                                                                               >  SRR4302543.1322592/1‑89 (MQ=60)
      GCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgc                                                                                              >  SRR4302543.4509143/1‑88 (MQ=60)
       CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgca                                                                                             >  SRR4302543.220483/1‑87 (MQ=60)
        AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcat                                                                                            >  SRR4302543.4850343/1‑86 (MQ=60)
        AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcat                                                                                            >  SRR4302543.1820055/1‑86 (MQ=60)
        AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccccac                                                                                            >  SRR4302543.1803623/1‑86 (MQ=60)
         AAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcatc                                                                                           <  SRR4302543.3398689/94‑10 (MQ=60)
          AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcatcc                                                                                          <  SRR4302543.1800837/94‑11 (MQ=60)
          AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcatcc                                                                                          <  SRR4302543.2477921/94‑11 (MQ=60)
           AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCG                                                                                      >  SRR4302543.770229/1‑94 (MQ=60)
           AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCG                                                                                      >  SRR4302543.6007824/1‑94 (MQ=60)
           AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCG                                                                                      >  SRR4302543.6245994/1‑94 (MQ=60)
           AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCG                                                                                      <  SRR4302543.2731194/94‑1 (MQ=60)
            GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGG                                                                                     <  SRR4302543.7884454/94‑1 (MQ=60)
            GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGG                                                                                     >  SRR4302543.5279173/1‑94 (MQ=60)
            GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGG                                                                                     <  SRR4302543.2059834/94‑1 (MQ=60)
             AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGC                                                                                    <  SRR4302543.7306264/94‑1 (MQ=60)
             AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGC                                                                                    >  SRR4302543.7412532/1‑94 (MQ=60)
             AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGC                                                                                    >  SRR4302543.7412531/1‑94 (MQ=60)
               GAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGA                                                                                  >  SRR4302543.6057335/1‑94 (MQ=60)
                AATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGAT                                                                                 >  SRR4302543.7742663/1‑94 (MQ=60)
                 ATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATG                                                                                <  SRR4302543.2462037/94‑1 (MQ=60)
                 ATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATG                                                                                >  SRR4302543.7241532/1‑94 (MQ=60)
                 ATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATG                                                                                <  SRR4302543.694817/94‑1 (MQ=60)
                 ATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATG                                                                                <  SRR4302543.1896670/94‑1 (MQ=60)
                  TTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGG                                                                               >  SRR4302543.3090404/1‑94 (MQ=60)
                  ATAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGG                                                                               <  SRR4302543.1870686/94‑1 (MQ=60)
                   TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGT                                                                              <  SRR4302543.6258446/94‑1 (MQ=60)
                   TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGT                                                                              >  SRR4302543.6291313/1‑94 (MQ=60)
                   TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGT                                                                              >  SRR4302543.7825838/1‑94 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTG                                                                             >  SRR4302543.561048/1‑94 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTG                                                                             >  SRR4302543.3323726/1‑94 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTG                                                                             <  SRR4302543.3242657/94‑1 (MQ=60)
                    AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTG                                                                             >  SRR4302543.7526038/1‑94 (MQ=60)
                     GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGC                                                                            <  SRR4302543.7695612/94‑1 (MQ=60)
                      AGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCA                                                                           >  SRR4302543.3577173/1‑94 (MQ=60)
                       GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCAC                                                                          >  SRR4302543.7148075/1‑94 (MQ=60)
                       GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCAC                                                                          <  SRR4302543.778571/94‑1 (MQ=60)
                        AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACT                                                                         <  SRR4302543.4012334/94‑1 (MQ=60)
                        AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACT                                                                         >  SRR4302543.928630/1‑94 (MQ=60)
                        AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACT                                                                         >  SRR4302543.4644339/1‑94 (MQ=60)
                        AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACT                                                                         >  SRR4302543.1047676/1‑94 (MQ=60)
                        AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACT                                                                         <  SRR4302543.3356138/94‑1 (MQ=60)
                         AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGCTAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTG                                                                        >  SRR4302543.3011397/1‑94 (MQ=60)
                         AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTG                                                                        <  SRR4302543.3867316/94‑1 (MQ=60)
                         AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTG                                                                        <  SRR4302543.3867318/94‑1 (MQ=60)
                         AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTG                                                                        <  SRR4302543.2348409/94‑1 (MQ=60)
                           AAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAA                                                                      <  SRR4302543.691205/94‑1 (MQ=60)
                            AGAAAAATTTGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAGGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAG                                                                     <  SRR4302543.7210345/94‑1 (MQ=60)
                            AGAAAAATATGGGGTATTGGGGGTTGTAATGCCTGATCCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAG                                                                     <  SRR4302543.7210346/94‑1 (MQ=44)
                            AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAG                                                                     >  SRR4302543.7814653/1‑94 (MQ=60)
                            AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAG                                                                     >  SRR4302543.2216921/1‑94 (MQ=60)
                            AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAG                                                                     <  SRR4302543.6527340/94‑1 (MQ=60)
                            AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAG                                                                     >  SRR4302543.6835469/1‑94 (MQ=60)
                             GAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGC                                                                    <  SRR4302543.3960741/94‑1 (MQ=60)
                             GAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGC                                                                    >  SRR4302543.6738788/1‑94 (MQ=60)
                              AAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCC                                                                   >  SRR4302543.7538226/1‑94 (MQ=60)
                              AAAAATATGGGGTATTGAGGGTTGCTATGCCTGATCCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCC                                                                   <  SRR4302543.716973/94‑1 (MQ=60)
                               AAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCT                                                                  <  SRR4302543.2197686/94‑1 (MQ=60)
                                AAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTG                                                                 <  SRR4302543.3850964/94‑1 (MQ=60)
                                AAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTG                                                                 >  SRR4302543.3042240/1‑94 (MQ=60)
                                 AATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGA                                                                >  SRR4302543.4789179/1‑94 (MQ=60)
                                  ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGAT                                                               >  SRR4302543.7265084/1‑94 (MQ=60)
                                  ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGAT                                                               >  SRR4302543.1871021/1‑94 (MQ=60)
                                  AGATGGGGTATTAGGGGTTGCTATGCCAGATGCCGATTCGTAGCCCGGATAAGGCG‑‑CT‑‑C‑G‑‑CGCCCCATCCGGCGATGGTGCACTGAAGCCTGAT                                                               <  SRR4302543.1584990/94‑1 (MQ=49)
                                    ATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGC                                                             >  SRR4302543.7627453/1‑94 (MQ=60)
                                    ATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGC                                                             >  SRR4302543.2414655/1‑94 (MQ=60)
                                      GGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGC                                                           >  SRR4302543.3482970/1‑94 (MQ=60)
                                      GGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGA                                                           <  SRR4302543.4589179/94‑1 (MQ=60)
                                      GGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGA                                                           <  SRR4302543.2373771/94‑1 (MQ=60)
                                       GGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGAC                                                          <  SRR4302543.6199174/94‑1 (MQ=60)
                                       GGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGAC                                                          <  SRR4302543.3605620/94‑1 (MQ=60)
                                        GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACG                                                         <  SRR4302543.3937182/94‑1 (MQ=60)
                                        GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACG                                                         <  SRR4302543.1411938/94‑1 (MQ=60)
                                         GTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCTACGC                                                        >  SRR4302543.4839885/1‑94 (MQ=60)
                                         GTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGC                                                        >  SRR4302543.4838617/1‑94 (MQ=60)
                                          TATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT                                                       >  SRR4302543.1429808/1‑94 (MQ=60)
                                           ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                                      >  SRR4302543.2493847/1‑94 (MQ=60)
                                           ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                                      <  SRR4302543.5359952/94‑1 (MQ=60)
                                           ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                                      >  SRR4302543.6817734/1‑94 (MQ=60)
                                            TTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTA                                                     >  SRR4302543.2114381/1‑94 (MQ=60)
                                             TGAGGGTTGCTTTGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC                                                    <  SRR4302543.6760114/94‑1 (MQ=60)
                                              GAGGGTTGCTATGCCTGATGCCGATGCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC                                                   <  SRR4302543.7859673/94‑1 (MQ=60)
                                               GGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG                                                  <  SRR4302543.1866304/94‑1 (MQ=60)
                                               AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG                                                  >  SRR4302543.3248923/1‑94 (MQ=60)
                                               AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG                                                  >  SRR4302543.3248924/1‑94 (MQ=60)
                                                GGGTTGCTATGCCTGATGCAGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGC                                                 <  SRR4302543.4141779/94‑1 (MQ=60)
                                                 GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG                                                <  SRR4302543.6626179/94‑1 (MQ=60)
                                                 GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG                                                <  SRR4302543.6877754/94‑1 (MQ=60)
                                                  GTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGT                                               >  SRR4302543.6230874/1‑94 (MQ=60)
                                                   TTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATTCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAGCGCGTC                                              >  SRR4302543.7421226/1‑94 (MQ=60)
                                                   TTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTC                                              >  SRR4302543.7421227/1‑94 (MQ=60)
                                                   TTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTC                                              <  SRR4302543.1167325/94‑1 (MQ=60)
                                                     GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                            >  SRR4302543.3657155/1‑94 (MQ=60)
                                                     GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                            <  SRR4302543.934999/94‑1 (MQ=60)
                                                     GCTATGCCTGATGCCGATTCGTAGGCCGAATAAGGCGCCCG‑‑CGC‑‑CG‑‑‑CAGCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                            <  SRR4302543.3173136/94‑1 (MQ=60)
                                                      CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGCCGCTTACTGCGTCTTT                                           >  SRR4302543.4130849/1‑94 (MQ=60)
                                                      CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA                                           >  SRR4302543.3585058/1‑94 (MQ=60)
                                                       TATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAT                                          <  SRR4302543.2158880/94‑1 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                                         >  SRR4302543.3115588/1‑94 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                                         <  SRR4302543.3063364/94‑1 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                                         <  SRR4302543.4389124/94‑1 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                                         >  SRR4302543.4577233/1‑94 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                                         >  SRR4302543.901263/1‑94 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                                         <  SRR4302543.6684239/94‑1 (MQ=60)
                                                        ATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATC                                         <  SRR4302543.6338931/94‑1 (MQ=60)
                                                         TGCCTGATGCCGATTCGTAGGCCGGATAGGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA                                        <  SRR4302543.1869786/94‑1 (MQ=60)
                                                         TGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA                                        >  SRR4302543.4285889/1‑94 (MQ=60)
                                                          GCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT                                       <  SRR4302543.6988407/94‑1 (MQ=60)
                                                          GCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT                                       <  SRR4302543.7626007/94‑1 (MQ=60)
                                                           CCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                                      >  SRR4302543.5894292/1‑94 (MQ=60)
                                                           CCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                                      <  SRR4302543.2136459/94‑1 (MQ=60)
                                                            CTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC                                     >  SRR4302543.1350087/1‑94 (MQ=60)
                                                             TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC                                    >  SRR4302543.5709829/1‑94 (MQ=60)
                                                             TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC                                    >  SRR4302543.7494771/1‑94 (MQ=60)
                                                             TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC                                    <  SRR4302543.1254395/94‑1 (MQ=60)
                                                             TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC                                    <  SRR4302543.6219385/94‑1 (MQ=60)
                                                              GATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                                   >  SRR4302543.7019171/1‑94 (MQ=60)
                                                              GATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                                   >  SRR4302543.6677429/1‑94 (MQ=60)
                                                              GATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                                   <  SRR4302543.4626751/94‑1 (MQ=60)
                                                               ATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA                                  >  SRR4302543.3099087/1‑94 (MQ=60)
                                                                TGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAC                                 >  SRR4302543.6292682/1‑94 (MQ=60)
                                                                TGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAC                                 <  SRR4302543.3853553/94‑1 (MQ=60)
                                                                 GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT                                <  SRR4302543.5464991/94‑1 (MQ=60)
                                                                 GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT                                <  SRR4302543.6750491/94‑1 (MQ=60)
                                                                 GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT                                <  SRR4302543.5862224/94‑1 (MQ=60)
                                                                 GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT                                <  SRR4302543.6472375/94‑1 (MQ=60)
                                                                  CCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG                               <  SRR4302543.5487800/94‑1 (MQ=60)
                                                                   CGATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                              <  SRR4302543.1252236/94‑1 (MQ=60)
                                                                    GATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG                             <  SRR4302543.4675448/94‑1 (MQ=60)
                                                                     ATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA                            >  SRR4302543.4503654/1‑94 (MQ=60)
                                                                     ATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA                            >  SRR4302543.3838523/1‑94 (MQ=60)
                                                                     ATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA                            >  SRR4302543.3838522/1‑94 (MQ=60)
                                                                     ATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA                            >  SRR4302543.3188642/1‑94 (MQ=60)
                                                                     ATTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGCCTTATCATGCCTACTGGGG                            >  SRR4302543.5953156/1‑94 (MQ=60)
                                                                      TTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG                           <  SRR4302543.5772721/94‑1 (MQ=60)
                                                                      TTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG                           >  SRR4302543.7261622/1‑94 (MQ=60)
                                                                      TTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG                           <  SRR4302543.3311402/94‑1 (MQ=60)
                                                                      TTCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAACATGCCTACTGGGAG                           <  SRR4302543.4700162/94‑1 (MQ=60)
                                                                       TCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGC                          >  SRR4302543.110104/1‑94 (MQ=60)
                                                                       TCGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGC                          <  SRR4302543.403390/94‑1 (MQ=60)
                                                                        CGTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA                         >  SRR4302543.4388940/1‑94 (MQ=60)
                                                                         GTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC                        >  SRR4302543.7272650/1‑94 (MQ=60)
                                                                         GTAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC                        <  SRR4302543.747433/94‑1 (MQ=60)
                                                                          TAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACG                       >  SRR4302543.7385629/1‑94 (MQ=60)
                                                                          TAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACG                       <  SRR4302543.402809/94‑1 (MQ=60)
                                                                          TAGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATCCCTACTGGGAGCACG                       <  SRR4302543.2630761/94‑1 (MQ=60)
                                                                           AGGCCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGC                      >  SRR4302543.435047/1‑94 (MQ=60)
                                                                              CCGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTT                   <  SRR4302543.7549096/94‑1 (MQ=60)
                                                                               CGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTA                  <  SRR4302543.1136052/94‑1 (MQ=60)
                                                                               CGGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTA                  <  SRR4302543.1136053/94‑1 (MQ=60)
                                                                                GGATGAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTAC                 <  SRR4302543.1506674/94‑1 (MQ=60)
                                                                                GGATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTAC                 <  SRR4302543.4112899/94‑1 (MQ=60)
                                                                                 GATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACA                >  SRR4302543.5068761/1‑94 (MQ=60)
                                                                                  ATAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAC               >  SRR4302543.4170863/1‑94 (MQ=60)
                                                                                   TAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC              <  SRR4302543.942133/94‑1 (MQ=60)
                                                                                   TAAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC              >  SRR4302543.1734909/1‑94 (MQ=60)
                                                                                    AAGGCG‑‑CTCGCGC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG             <  SRR4302543.4990463/94‑1 (MQ=60)
                                                                                     AGGCG‑‑CT‑‑CGGCCCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGG            <  SRR4302543.150491/94‑1 (MQ=60)
                                                                                                 GC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  <  SRR4302543.354091/94‑1 (MQ=60)
                                                                                                 GC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  <  SRR4302543.1382279/94‑1 (MQ=60)
                                                                                                 GC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  <  SRR4302543.3921758/94‑1 (MQ=60)
                                                                                                 GC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  <  SRR4302543.7679176/94‑1 (MQ=60)
                                                                                                 GC‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  <  SRR4302543.545945/94‑1 (MQ=60)
                                                                                                 |                                                                                                  
GATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGG‑‑CG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  >  NC_000913/4448448‑4448634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑