Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,472,408 A→G intergenic (+117/‑28) b4251 → / → b4252 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,472,4080AG99.8% 1506.9 / NA 470intergenic (+117/‑28)b4251/b4252hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (237/232);  minor base C (0/1);  total (237/233)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 480 total aligned reads displayed.

AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT  >  NC_000913/4472319‑4472497
                                                                                         |                                                                                         
aGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgt                                                                                        <  1:7335507/93‑1 (MQ=255)
 gcgcCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgtt                                                                                       <  1:6775977/93‑1 (MQ=255)
    ccTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgtt                                                                                    <  2:7756015/93‑1 (MQ=255)
    ccTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCgttgtt                                                                                    >  2:4341476/1‑93 (MQ=255)
     cTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGttt                                                                                   >  2:5164265/1‑93 (MQ=255)
      tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  >  2:5886632/1‑93 (MQ=255)
      tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGtttt                                                                                  <  2:7267589/93‑1 (MQ=255)
      tGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGATGtttt                                                                                  >  2:63460/1‑93 (MQ=255)
       gCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTtta                                                                                 <  2:6771407/93‑1 (MQ=255)
       gCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTtta                                                                                 <  2:3405120/93‑1 (MQ=255)
        ccGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaa                                                                                >  1:2338408/1‑93 (MQ=255)
        ccGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaa                                                                                <  2:2899382/93‑1 (MQ=255)
          gATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatt                                                                              >  1:2193190/1‑93 (MQ=255)
          gATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatt                                                                              <  2:915439/93‑1 (MQ=255)
          gATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatt                                                                              <  1:6114653/93‑1 (MQ=255)
           aTAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaatta                                                                             <  1:1402525/93‑1 (MQ=255)
            tAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaattaa                                                                            <  1:5598647/93‑1 (MQ=255)
            tAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTttaattaa                                                                            >  1:4279906/1‑93 (MQ=255)
             aaGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAg                                                                           <  2:5323477/93‑1 (MQ=255)
             aaGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAg                                                                           <  2:5454669/93‑1 (MQ=255)
               gTTGTGATAAGACAATAATTCACTCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGa                                                                         <  2:5413365/93‑1 (MQ=255)
               gTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGa                                                                         >  2:2432586/1‑93 (MQ=255)
                ttGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAg                                                                        <  1:3485463/93‑1 (MQ=255)
                ttGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAg                                                                        >  1:22686/1‑93 (MQ=255)
                 tgtgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGt                                                                       <  1:3568327/93‑1 (MQ=255)
                 tgtgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGt                                                                       <  1:7687340/93‑1 (MQ=255)
                 tgtgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGt                                                                       >  2:4046874/1‑93 (MQ=255)
                  gtgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTg                                                                      >  1:4170044/1‑93 (MQ=255)
                   tgATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTgg                                                                     <  1:6303211/93‑1 (MQ=255)
                       aaGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGaaaa                                                                 <  2:2051900/93‑1 (MQ=255)
                       aaGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGAAAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGaaaa                                                                 <  2:7691640/93‑1 (MQ=255)
                        aGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAg                                                                >  2:7000241/1‑93 (MQ=255)
                         gACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAga                                                               <  1:7826827/93‑1 (MQ=255)
                          aCAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgat                                                              <  1:1969464/93‑1 (MQ=255)
                           cAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatg                                                             >  2:2794868/1‑93 (MQ=255)
                           cAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatg                                                             >  2:1849738/1‑93 (MQ=255)
                           cAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatg                                                             <  2:7381373/93‑1 (MQ=255)
                            aatagtACACGCGTTACGGCGAGCGCAATTGATTAGCGTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGGGGACAAgatga                                                            <  2:580399/93‑1 (MQ=255)
                             ataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat                                                           <  2:1401268/93‑1 (MQ=255)
                             ataatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAgatgat                                                           >  1:6230401/1‑93 (MQ=255)
                              taatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatc                                                          >  2:4184407/1‑93 (MQ=255)
                              taatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatc                                                          <  1:2916771/93‑1 (MQ=255)
                               aatTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatca                                                         <  2:4876552/93‑1 (MQ=255)
                                atTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGatcat                                                        >  1:6518683/1‑93 (MQ=255)
                                  tCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCg                                                      <  2:1889899/93‑1 (MQ=255)
                                    aCGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGa                                                    <  1:1874033/93‑1 (MQ=255)
                                      gcgTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGaaa                                                  <  2:7147325/93‑1 (MQ=255)
                                      gcgTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGaaa                                                  <  2:7501120/93‑1 (MQ=255)
                                        gTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAata                                                <  1:3728102/93‑1 (MQ=255)
                                         ttAAGGGTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               >  2:5641193/1‑93 (MQ=255)
                                         ttAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAatat                                               >  2:6568436/1‑93 (MQ=255)
                                           aaGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTc                                             >  1:1187755/1‑93 (MQ=255)
                                             ggCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAt                                           >  2:6195742/1‑93 (MQ=255)
                                              gCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGTAAAGATGATCATCGGAAATATTCATa                                          >  1:7572098/1‑93 (MQ=255)
                                                 aGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATc                                       >  2:5527283/1‑93 (MQ=255)
                                                    ggAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTc                                    >  2:4517145/1‑93 (MQ=255)
                                                     gAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCa                                   >  1:6856718/1‑93 (MQ=255)
                                                      aaTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAg                                  <  1:6437530/93‑1 (MQ=255)
                                                      aaTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAg                                  >  1:1603652/1‑93 (MQ=255)
                                                      aaTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAg                                  >  2:6093114/1‑93 (MQ=255)
                                                       aTTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGc                                 <  1:5974196/93‑1 (MQ=255)
                                                        ttGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGcc                                <  2:221900/93‑1 (MQ=255)
                                                        ttGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGcc                                >  1:5082793/1‑93 (MQ=255)
                                                         tGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCg                               >  2:6497433/1‑93 (MQ=255)
                                                         tGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCg                               <  2:4627436/93‑1 (MQ=255)
                                                          gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              >  1:5805398/1‑93 (MQ=255)
                                                          gATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGt                              <  1:1291267/93‑1 (MQ=255)
                                                           aTTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAGTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTg                             <  1:3316758/93‑1 (MQ=255)
                                                             tATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGc                           >  1:4129726/1‑93 (MQ=255)
                                                               tCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTa                         >  1:4538636/1‑93 (MQ=255)
                                                               tCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTa                         >  2:3746198/1‑93 (MQ=255)
                                                               tCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTa                         >  2:128065/1‑93 (MQ=255)
                                                                cTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAc                        >  1:4406495/1‑93 (MQ=255)
                                                                cTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAc                        <  1:1025624/93‑1 (MQ=255)
                                                                  tttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAccc                      <  2:3895912/93‑1 (MQ=255)
                                                                  tttCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAccc                      <  1:7304474/93‑1 (MQ=255)
                                                                    tCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCa                    <  1:5123327/93‑1 (MQ=255)
                                                                     cGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAg                   <  1:343187/93‑1 (MQ=255)
                                                                      gTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAgg                  >  2:1566148/1‑93 (MQ=255)
                                                                      gTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAgg                  >  2:5049027/1‑93 (MQ=255)
                                                                      gTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAgg                  >  1:6988323/1‑93 (MQ=255)
                                                                           aCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTa             <  2:4261054/93‑1 (MQ=255)
                                                                           aCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTa             <  2:3150872/93‑1 (MQ=255)
                                                                           aCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTa             <  2:6654091/93‑1 (MQ=255)
                                                                           aCGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTa             <  1:3940881/93‑1 (MQ=255)
                                                                              aTAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGc          >  2:6832630/1‑93 (MQ=255)
                                                                              aTAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGc          >  2:3577867/1‑93 (MQ=255)
                                                                               tAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGcc         >  1:7403237/1‑93 (MQ=255)
                                                                                aGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCa        <  1:4853074/93‑1 (MQ=255)
                                                                                aGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCa        <  1:2495667/93‑1 (MQ=255)
                                                                                aGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCa        <  2:2608641/93‑1 (MQ=255)
                                                                                 gAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAg       <  2:1193189/93‑1 (MQ=255)
                                                                                   aaTGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGc     >  2:5749483/1‑93 (MQ=255)
                                                                                   aaTGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGc     <  1:31812/93‑1 (MQ=255)
                                                                                     tGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGa   >  1:550450/1‑93 (MQ=255)
                                                                                     tGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGa   >  1:4659680/1‑93 (MQ=255)
                                                                                     tGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGa   >  1:2648429/1‑93 (MQ=255)
                                                                                      gAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAt  >  1:5343991/1‑93 (MQ=255)
                                                                                      gAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAt  <  1:954700/93‑1 (MQ=255)
                                                                                      gAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAt  <  2:1103601/93‑1 (MQ=255)
                                                                                         |                                                                                         
AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT  >  NC_000913/4472319‑4472497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 244 total aligned reads displayed.
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  NC_000913/4472315‑4472501
                                                                                             |                                                                                             
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAG                                                                                               >  SRR4302543.7699813/1‑94 (MQ=60)
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAG                                                                                               >  SRR4302543.208811/1‑94 (MQ=60)
 GAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGC                                                                                              <  SRR4302543.632328/94‑1 (MQ=60)
  AAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCG                                                                                             <  SRR4302543.4716126/94‑1 (MQ=60)
  AAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCG                                                                                             <  SRR4302543.7769893/94‑1 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           <  SRR4302543.920116/94‑1 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           >  SRR4302543.4211454/1‑94 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           >  SRR4302543.6070010/1‑94 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           <  SRR4302543.7406082/94‑1 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           <  SRR4302543.6758020/94‑1 (MQ=60)
    AGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGATAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTT                                                                                           >  SRR4302543.3562377/1‑94 (MQ=60)
     GCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTG                                                                                          <  SRR4302543.6839982/94‑1 (MQ=60)
     GCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTG                                                                                          <  SRR4302543.4126357/94‑1 (MQ=60)
      CGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGT                                                                                         >  SRR4302543.2331018/1‑94 (MQ=60)
      CGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGT                                                                                         >  SRR4302543.2868229/1‑94 (MQ=60)
        CCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTT                                                                                       >  SRR4302543.5462500/1‑94 (MQ=60)
         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      >  SRR4302543.1401508/1‑94 (MQ=60)
         CTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTT                                                                                      >  SRR4302543.3962384/1‑94 (MQ=60)
          TGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTA                                                                                     >  SRR4302543.1612480/1‑94 (MQ=60)
           GCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAA                                                                                    >  SRR4302543.2359626/1‑94 (MQ=60)
            GCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   <  SRR4302543.5706856/94‑1 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   >  SRR4302543.4734916/1‑94 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   <  SRR4302543.3019961/94‑1 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   <  SRR4302543.6314553/94‑1 (MQ=60)
            CCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAT                                                                                   >  SRR4302543.1939819/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATTTTTTCGTATACCGATAGAAATGAAGCGTTGGTTTAATT                                                                                  >  SRR4302543.2212894/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302543.2212893/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302543.5379331/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302543.2212892/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302543.2156832/1‑94 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  <  SRR4302543.6517734/94‑1 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  <  SRR4302543.6543087/94‑1 (MQ=60)
             CGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGGATAACGATAGAAATGAAGCGTTGTTTTAATT                                                                                  >  SRR4302543.6275414/1‑94 (MQ=60)
              GATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTA                                                                                 >  SRR4302543.6651040/1‑94 (MQ=60)
               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                <  SRR4302543.6570078/94‑1 (MQ=60)
               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                >  SRR4302543.4318805/1‑94 (MQ=60)
               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                <  SRR4302543.1415183/94‑1 (MQ=60)
               ATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAA                                                                                >  SRR4302543.539642/1‑94 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302543.30720/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302543.3971737/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302543.1225717/94‑1 (MQ=60)
                TAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAG                                                                               <  SRR4302543.5649648/94‑1 (MQ=60)
                 AAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGG                                                                              >  SRR4302543.954782/1‑94 (MQ=60)
                  AGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGA                                                                             >  SRR4302543.737289/1‑94 (MQ=60)
                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            >  SRR4302543.22895/1‑94 (MQ=60)
                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            >  SRR4302543.5998841/1‑94 (MQ=60)
                   GTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAG                                                                            <  SRR4302543.7949679/94‑1 (MQ=60)
                    TTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGT                                                                           <  SRR4302543.3516674/94‑1 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302543.5133284/94‑1 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302543.3599884/94‑1 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302543.1200209/94‑1 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          >  SRR4302543.4106350/1‑94 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302543.741502/94‑1 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          >  SRR4302543.4207804/1‑94 (MQ=60)
                     TGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTG                                                                          <  SRR4302543.5029847/94‑1 (MQ=60)
                      GTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGG                                                                         >  SRR4302543.419922/1‑94 (MQ=60)
                        GATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAA                                                                       >  SRR4302543.1397070/1‑94 (MQ=60)
                         ATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAA                                                                      >  SRR4302543.6026876/1‑94 (MQ=60)
                          TAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAA                                                                     >  SRR4302543.4576807/1‑94 (MQ=60)
                          TAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAA                                                                     <  SRR4302543.4629384/94‑1 (MQ=60)
                           AAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAG                                                                    <  SRR4302543.3569966/94‑1 (MQ=60)
                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302543.6644049/94‑1 (MQ=60)
                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302543.7882342/94‑1 (MQ=60)
                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302543.1361440/94‑1 (MQ=60)
                             GACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGAT                                                                  <  SRR4302543.3048368/94‑1 (MQ=60)
                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 >  SRR4302543.1069242/1‑94 (MQ=60)
                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 <  SRR4302543.1987116/94‑1 (MQ=60)
                              ACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATG                                                                 >  SRR4302543.7520224/1‑94 (MQ=60)
                               CAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGA                                                                >  SRR4302543.2553486/1‑94 (MQ=60)
                               CAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGA                                                                <  SRR4302543.5074348/94‑1 (MQ=60)
                               CAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGA                                                                <  SRR4302543.4093765/94‑1 (MQ=60)
                                AATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               >  SRR4302543.862704/1‑94 (MQ=60)
                                AATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGAT                                                               >  SRR4302543.7408970/1‑94 (MQ=60)
                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              >  SRR4302543.515503/1‑94 (MQ=60)
                                 ATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATC                                                              <  SRR4302543.6053273/94‑1 (MQ=60)
                                  TAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCA                                                             <  SRR4302543.350149/94‑1 (MQ=60)
                                  TAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCA                                                             >  SRR4302543.48320/1‑94 (MQ=60)
                                  TAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCA                                                             <  SRR4302543.498615/94‑1 (MQ=60)
                                  TAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCA                                                             <  SRR4302543.2943273/94‑1 (MQ=60)
                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCAT                                                            >  SRR4302543.6580073/1‑94 (MQ=60)
                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCAT                                                            >  SRR4302543.1237691/1‑94 (MQ=60)
                                   AATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCAT                                                            <  SRR4302543.7700671/94‑1 (MQ=60)
                                    ATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATC                                                           >  SRR4302543.5723819/1‑94 (MQ=60)
                                    ATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATC                                                           <  SRR4302543.7865289/94‑1 (MQ=60)
                                    ATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATC                                                           >  SRR4302543.3553438/1‑94 (MQ=60)
                                    ATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATC                                                           >  SRR4302543.3658650/1‑94 (MQ=60)
                                     TTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCG                                                          <  SRR4302543.3226378/94‑1 (MQ=60)
                                      TCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGG                                                         <  SRR4302543.6398056/94‑1 (MQ=60)
                                       CACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGA                                                        >  SRR4302543.3385789/1‑94 (MQ=60)
                                       CACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGA                                                        >  SRR4302543.6326223/1‑94 (MQ=60)
                                        ACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAA                                                       <  SRR4302543.1890865/94‑1 (MQ=60)
                                          GCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAAT                                                     <  SRR4302543.5381267/94‑1 (MQ=60)
                                           CGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATA                                                    >  SRR4302543.5173434/1‑94 (MQ=60)
                                           CGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATA                                                    <  SRR4302543.5581432/94‑1 (MQ=60)
                                           CGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATA                                                    >  SRR4302543.7483429/1‑94 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCTGAAATAT                                                   >  SRR4302543.7645330/1‑94 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   >  SRR4302543.445209/1‑94 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   <  SRR4302543.4188219/94‑1 (MQ=60)
                                            GTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATAT                                                   <  SRR4302543.3760884/94‑1 (MQ=60)
                                               AAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCA                                                <  SRR4302543.4350993/94‑1 (MQ=60)
                                                AGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAT                                               <  SRR4302543.2599352/94‑1 (MQ=60)
                                                AGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCAT                                               <  SRR4302543.6058733/94‑1 (MQ=60)
                                                 GGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATA                                              <  SRR4302543.6279326/94‑1 (MQ=60)
                                                  GCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             >  SRR4302543.2091067/1‑94 (MQ=60)
                                                  GCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAA                                             >  SRR4302543.2091066/1‑94 (MQ=60)
                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302543.2898834/94‑1 (MQ=60)
                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            <  SRR4302543.5707896/94‑1 (MQ=60)
                                                   CTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAAT                                            >  SRR4302543.704622/1‑94 (MQ=60)
                                                    TAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATC                                           >  SRR4302543.2369395/1‑94 (MQ=60)
                                                    TAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATC                                           <  SRR4302543.1816086/94‑1 (MQ=60)
                                                    TAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATC                                           >  SRR4302543.6364476/1‑94 (MQ=60)
                                                    TAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATC                                           <  SRR4302543.2391014/94‑1 (MQ=60)
                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        >  SRR4302543.6125159/1‑94 (MQ=60)
                                                       CGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTC                                        >  SRR4302543.6883094/1‑94 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       >  SRR4302543.6392941/1‑94 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       >  SRR4302543.6921365/1‑94 (MQ=60)
                                                        GGAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCA                                       <  SRR4302543.2399812/94‑1 (MQ=60)
                                                         GAATTGATTATCTTTTCGTATAACGATAGGAATGAAGCGTTGTTTTAATTAAGGAGTGGTAAAGATGATGATCGGAAATATTCATAATCTTCTG                                      >  SRR4302543.4586693/1‑94 (MQ=60)
                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      >  SRR4302543.1880486/1‑94 (MQ=60)
                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      >  SRR4302543.1617963/1‑94 (MQ=60)
                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      <  SRR4302543.4600490/94‑1 (MQ=60)
                                                         GAATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAG                                      >  SRR4302543.1872387/1‑94 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     >  SRR4302543.3689931/1‑94 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     <  SRR4302543.6914968/94‑1 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     <  SRR4302543.6498181/94‑1 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     >  SRR4302543.6741848/1‑94 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     >  SRR4302543.4722784/1‑94 (MQ=60)
                                                          AATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGC                                     >  SRR4302543.7378261/1‑94 (MQ=60)
                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302543.7738605/1‑94 (MQ=60)
                                                           ATTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCC                                    >  SRR4302543.5128883/1‑94 (MQ=60)
                                                            TTGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCG                                   >  SRR4302543.2301094/1‑94 (MQ=60)
                                                             TGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGT                                  >  SRR4302543.5858195/1‑94 (MQ=60)
                                                             TGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGT                                  >  SRR4302543.438615/1‑94 (MQ=60)
                                                             TGATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGT                                  >  SRR4302543.2333376/1‑94 (MQ=60)
                                                             TGATTATCTGTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGT                                  <  SRR4302543.4181134/94‑1 (MQ=60)
                                                              GATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTG                                 <  SRR4302543.1302764/94‑1 (MQ=60)
                                                              GATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTG                                 <  SRR4302543.6883013/94‑1 (MQ=60)
                                                              GATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTG                                 >  SRR4302543.6932812/1‑94 (MQ=60)
                                                               ATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGG                                >  SRR4302543.16183/1‑94 (MQ=60)
                                                               ATTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAAGTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGG                                <  SRR4302543.3346689/94‑1 (MQ=60)
                                                                TTATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGC                               >  SRR4302543.4392362/1‑94 (MQ=60)
                                                                  ATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTA                             >  SRR4302543.4249776/1‑94 (MQ=60)
                                                                  ATCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTA                             >  SRR4302543.4579959/1‑94 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302543.3283383/94‑1 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            >  SRR4302543.4446441/1‑94 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302543.1611643/94‑1 (MQ=60)
                                                                   TCTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAC                            <  SRR4302543.7363297/94‑1 (MQ=60)
                                                                    CTTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACC                           <  SRR4302543.1034704/94‑1 (MQ=60)
                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC                          <  SRR4302543.4456806/94‑1 (MQ=60)
                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC                          >  SRR4302543.3516718/1‑94 (MQ=60)
                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC                          <  SRR4302543.7624169/94‑1 (MQ=60)
                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC                          >  SRR4302543.5152129/1‑94 (MQ=60)
                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC                          >  SRR4302543.5936645/1‑94 (MQ=60)
                                                                     TTTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCC                          >  SRR4302543.5601854/1‑94 (MQ=60)
                                                                      TTTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCC                         <  SRR4302543.7374916/94‑1 (MQ=60)
                                                                       TTCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCA                        <  SRR4302543.326854/94‑1 (MQ=60)
                                                                        TCGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAG                       <  SRR4302543.5169651/94‑1 (MQ=60)
                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      <  SRR4302543.7828099/94‑1 (MQ=60)
                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      <  SRR4302543.346352/94‑1 (MQ=60)
                                                                         CGTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGG                      >  SRR4302543.7054092/1‑94 (MQ=60)
                                                                          GTATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGA                     >  SRR4302543.3682457/1‑94 (MQ=60)
                                                                           TATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCGGGAG                    <  SRR4302543.739012/94‑1 (MQ=60)
                                                                           TATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAT                    >  SRR4302543.5439506/1‑94 (MQ=60)
                                                                           TATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAG                    <  SRR4302543.4299994/94‑1 (MQ=60)
                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTAGCCCAGGAGT                   >  SRR4302543.626216/1‑94 (MQ=60)
                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAcgtgt                   >  SRR4302543.626217/1‑89 (MQ=60)
                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGT                   >  SRR4302543.3830784/1‑94 (MQ=60)
                                                                            ATAACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGT                   >  SRR4302543.7429241/1‑94 (MQ=60)
                                                                              AACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTA                 <  SRR4302543.6356856/94‑1 (MQ=60)
                                                                              AACGACAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTA                 <  SRR4302543.6424781/94‑1 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                >  SRR4302543.1055749/1‑94 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                <  SRR4302543.1058628/94‑1 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                <  SRR4302543.1218511/94‑1 (MQ=60)
                                                                               ACGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTAC                >  SRR4302543.6005098/1‑94 (MQ=60)
                                                                                CGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACG               >  SRR4302543.1919084/1‑94 (MQ=60)
                                                                                CGATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACG               >  SRR4302543.2820557/1‑94 (MQ=60)
                                                                                 GATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGC              >  SRR4302543.7856712/1‑94 (MQ=60)
                                                                                 GATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGC              >  SRR4302543.3978251/1‑94 (MQ=60)
                                                                                  ATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCC             >  SRR4302543.3404477/1‑94 (MQ=60)
                                                                                  ATAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCC             >  SRR4302543.7474300/1‑94 (MQ=60)
                                                                                   TAGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCA            >  SRR4302543.3499437/1‑94 (MQ=60)
                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           <  SRR4302543.2518304/94‑1 (MQ=60)
                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           <  SRR4302543.4897327/94‑1 (MQ=60)
                                                                                    AGAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAG           <  SRR4302543.725864/94‑1 (MQ=60)
                                                                                     GAAATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGG          <  SRR4302543.620763/94‑1 (MQ=60)
                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        >  SRR4302543.7519352/1‑94 (MQ=60)
                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        <  SRR4302543.32100/94‑1 (MQ=60)
                                                                                       AATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCG        <  SRR4302543.3909968/94‑1 (MQ=60)
                                                                                        ATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGA       >  SRR4302543.2672433/1‑94 (MQ=60)
                                                                                        ATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGA       >  SRR4302543.4702123/1‑94 (MQ=60)
                                                                                        ATGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGA       >  SRR4302543.555517/1‑94 (MQ=60)
                                                                                         TGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT      >  SRR4302543.5392338/1‑94 (MQ=60)
                                                                                         TGAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGAT      >  SRR4302543.2570118/1‑94 (MQ=60)
                                                                                          GAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATT     <  SRR4302543.7208222/94‑1 (MQ=60)
                                                                                          GAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATT     <  SRR4302543.2242146/94‑1 (MQ=60)
                                                                                          GAAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATT     <  SRR4302543.344457/94‑1 (MQ=60)
                                                                                           AAGCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTG    >  SRR4302543.5326627/1‑94 (MQ=60)
                                                                                             GCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  SRR4302543.4950044/1‑94 (MQ=60)
                                                                                             GCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  SRR4302543.4950043/1‑94 (MQ=60)
                                                                                             GCGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  <  SRR4302543.117439/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGAAAGCGCCTGCCGATAAGTTGTGATAAGACAATAATTCACGCGTTAAGGCTAGCGGAATTGATTATCTTTTCGTATAACGATAGAAATGAAACGTTGTTTTAATTAAGGAGTGGAAAAGATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAG  >  NC_000913/4472315‑4472501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑