Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,484,843 T→C V353A (GTC→GCC)  yjgP → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,484,8430TC99.4% 1090.2 / ‑4.4 355V353A (GTC→GCC) yjgPhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (185/168);  total (186/169)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01

Only 100 of 370 total aligned reads displayed.

GTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT  >  NC_000913/4484753‑4484932
                                                                                          |                                                                                         
 tAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCccg                                                                                        >  2:7341478/1‑93 (MQ=255)
  aaGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCccgc                                                                                       <  2:1348222/93‑1 (MQ=255)
  aaGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCccgc                                                                                       >  1:2522090/1‑93 (MQ=255)
   aGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCccgcc                                                                                      >  2:7916269/1‑93 (MQ=255)
    gCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCccgcca                                                                                     >  1:1671484/1‑92 (MQ=255)
       ggACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCCCCt                                                                                  >  2:5791407/1‑93 (MQ=255)
        gACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTg                                                                                 >  1:4017041/1‑93 (MQ=255)
         aCCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTgc                                                                                <  2:3501677/93‑1 (MQ=255)
           ccGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCCACCTTTGGGACACCGTGCCGGCCCGCCCCCTgccc                                                                              >  2:1459513/1‑91 (MQ=255)
                 cTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGt                                                                        <  2:632085/93‑1 (MQ=255)
                  tgtggatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGtt                                                                       >  1:2267506/1‑93 (MQ=255)
                  tgtggatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGtt                                                                       >  1:4776942/1‑93 (MQ=255)
                   gtggatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGttt                                                                      <  2:2924801/93‑1 (MQ=255)
                    tggatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGtttt                                                                     <  1:3279788/93‑1 (MQ=255)
                     ggatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGttttt                                                                    <  1:1501470/93‑1 (MQ=255)
                      gatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTc                                                                   >  1:2145594/1‑93 (MQ=255)
                      gatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTc                                                                   <  2:7135437/93‑1 (MQ=255)
                       atgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTcg                                                                  >  2:4382668/1‑93 (MQ=255)
                        tgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTcgc                                                                 >  2:4745109/1‑93 (MQ=255)
                        tgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTcgc                                                                 >  1:112044/1‑93 (MQ=255)
                          tggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGt                                                               <  1:4131293/93‑1 (MQ=255)
                           ggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTa                                                              >  1:2012848/1‑93 (MQ=255)
                           ggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTa                                                              >  1:5549070/1‑93 (MQ=255)
                              ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAg                                                           <  2:1148244/93‑1 (MQ=255)
                              ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAg                                                           <  2:1886789/93‑1 (MQ=255)
                              ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAg                                                           <  1:4230840/93‑1 (MQ=255)
                               cGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTTGGACACCGTGCCGGCCCGCCTCCTGCGCGCCAGTTTTTCGCGTAAAgg                                                          <  1:1400665/93‑1 (MQ=255)
                               cGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAgg                                                          >  1:6122815/1‑93 (MQ=255)
                               cGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAgg                                                          >  1:4482827/1‑93 (MQ=255)
                                gTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGa                                                         >  1:3623273/1‑93 (MQ=255)
                                gTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGa                                                         >  1:2410642/1‑93 (MQ=255)
                                  tAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGc                                                       <  1:5783785/93‑1 (MQ=255)
                                  tAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGc                                                       <  1:4932262/93‑1 (MQ=255)
                                  tAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGc                                                       <  2:1607437/93‑1 (MQ=255)
                                    aCCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCgg                                                     <  2:5014991/93‑1 (MQ=255)
                                     ccTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgt                                                    >  2:7270521/1‑93 (MQ=255)
                                      cTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgtg                                                   <  1:6582469/93‑1 (MQ=255)
                                       tGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgtgt                                                  <  2:2571287/93‑1 (MQ=255)
                                       tGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgtgt                                                  <  2:1069033/93‑1 (MQ=255)
                                       tGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgtgg                                                  >  2:5632355/1‑92 (MQ=255)
                                       tGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgtgg                                                  >  2:2211456/1‑92 (MQ=255)
                                       tGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGAACCAGTTTTTCGCGTAAAGGAGCGgtgg                                                  >  1:1005014/1‑92 (MQ=255)
                                        gATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGtgtg                                                 <  2:6619503/93‑1 (MQ=255)
                                         aTTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGa                                                >  1:3868026/1‑93 (MQ=255)
                                         aTTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGa                                                <  1:5202758/93‑1 (MQ=255)
                                         aTTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGa                                                <  1:6273176/93‑1 (MQ=255)
                                          tttATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGAt                                               <  1:7575085/93‑1 (MQ=255)
                                          tttATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGAt                                               >  1:1815680/1‑93 (MQ=255)
                                          tttATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGAt                                               >  2:6741115/1‑93 (MQ=255)
                                          tttATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGAt                                               <  1:3123870/93‑1 (MQ=255)
                                           ttATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATg                                              >  2:4897709/1‑93 (MQ=255)
                                            tATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGc                                             >  1:3365233/1‑93 (MQ=255)
                                            tATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGc                                             >  1:7786630/1‑93 (MQ=255)
                                              tCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCaa                                           >  2:5845678/1‑93 (MQ=255)
                                              tCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGGTTTTTGCGTAAAGGAGCGGTGTGATGCaa                                           >  2:2965869/1‑93 (MQ=255)
                                               cTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAAc                                          <  1:5477184/93‑1 (MQ=255)
                                                tGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAAcc                                         >  1:6658441/1‑93 (MQ=255)
                                                tGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAAcc                                         <  1:6471748/93‑1 (MQ=255)
                                                 ggCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCt                                        <  1:1191513/93‑1 (MQ=255)
                                                  gCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCtt                                       >  2:5361481/1‑93 (MQ=255)
                                                  gCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTCCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCtt                                       >  2:2141880/1‑93 (MQ=255)
                                                   cTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCttt                                      >  2:2311417/1‑93 (MQ=255)
                                                    tttAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCtttt                                     <  1:6790160/93‑1 (MQ=255)
                                                       aGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGc                                  <  1:5889838/93‑1 (MQ=255)
                                                       aGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGc                                  <  2:4030825/93‑1 (MQ=255)
                                                          gATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTa                               <  1:7377007/93‑1 (MQ=255)
                                                           aTTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTAc                              >  1:7490364/1‑93 (MQ=255)
                                                             tGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACtt                            <  2:5139607/93‑1 (MQ=255)
                                                             tGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACtt                            <  1:2822004/93‑1 (MQ=255)
                                                              gTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTg                           >  1:7108466/1‑93 (MQ=255)
                                                               ttCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGa                          >  2:6466952/1‑93 (MQ=255)
                                                                 ctcAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGAcc                        >  2:4249384/1‑93 (MQ=255)
                                                                  tcAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTCTTGGCGTACTTGAcag                       >  2:2693596/1‑91 (MQ=255)
                                                                    aaCCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCt                     >  1:2713019/1‑93 (MQ=255)
                                                                    aaCCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCt                     >  2:5863676/1‑93 (MQ=255)
                                                                      ccTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCtat                   <  1:2974105/93‑1 (MQ=255)
                                                                      ccTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCtat                   <  2:1281092/93‑1 (MQ=255)
                                                                       cTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGGTGCAACCTTTTGGCGTACTTGACCGCtata                  >  2:5510314/1‑93 (MQ=255)
                                                                       cTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCtata                  <  2:3404587/93‑1 (MQ=255)
                                                                       cTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCtata                  <  2:6809624/93‑1 (MQ=255)
                                                                        tttGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTTGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTatat                 >  2:3856708/1‑93 (MQ=255)
                                                                         ttGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATc                <  2:701999/93‑1 (MQ=255)
                                                                         ttGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATc                <  1:5283403/93‑1 (MQ=255)
                                                                         ttGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATc                >  1:1649903/1‑93 (MQ=255)
                                                                          tGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCg               <  2:5095594/93‑1 (MQ=255)
                                                                          tGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCg               <  2:3655838/93‑1 (MQ=255)
                                                                           gggACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCgg              <  2:1809377/93‑1 (MQ=255)
                                                                           gggACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCgg              >  2:4003174/1‑93 (MQ=255)
                                                                            ggACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCgga             >  1:1238043/1‑92 (MQ=255)
                                                                               cacCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTaaa          >  2:3153952/1‑93 (MQ=255)
                                                                                acCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTaaaa         >  1:5836329/1‑93 (MQ=255)
                                                                                 ccGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAAc        >  2:6121187/1‑93 (MQ=255)
                                                                                 ccGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAAc        >  2:7431160/1‑93 (MQ=255)
                                                                                  cGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACt       <  2:3562011/93‑1 (MQ=255)
                                                                                  cGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACt       >  2:4498130/1‑93 (MQ=255)
                                                                                   gTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTa      <  1:999205/93‑1 (MQ=255)
                                                                                    tGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAt     >  1:4358175/1‑93 (MQ=255)
                                                                                      ccGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAttt   <  1:6970424/93‑1 (MQ=255)
                                                                                      ccGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAttt   <  2:4317410/93‑1 (MQ=255)
                                                                                      ccGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAttt   <  1:78990/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT  >  NC_000913/4484753‑4484932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACC  >  NC_000913/4484750‑4484936
                                                                                             |                                                                                             
AAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGC                                                                                               >  SRR4302543.319226/1‑94 (MQ=60)
AAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGC                                                                                               >  SRR4302543.5909254/1‑94 (MQ=60)
 AGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCC                                                                                              >  SRR4302543.3060352/1‑94 (MQ=60)
 AGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCC                                                                                              >  SRR4302543.3405666/1‑94 (MQ=60)
 AGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCC                                                                                              >  SRR4302543.1123449/1‑94 (MQ=60)
   GTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCG                                                                                            <  SRR4302543.7147997/94‑1 (MQ=60)
   GTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCG                                                                                            >  SRR4302543.1527878/1‑94 (MQ=60)
    TAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGC                                                                                           >  SRR4302543.2545018/1‑94 (MQ=60)
    TAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGC                                                                                           <  SRR4302543.1683205/94‑1 (MQ=60)
     AAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGCCCCGCC                                                                                          >  SRR4302543.1670421/1‑94 (MQ=60)
     AAGCTGGACACGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCC                                                                                          <  SRR4302543.3255918/94‑1 (MQ=60)
      AGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCA                                                                                         <  SRR4302543.6525255/94‑1 (MQ=60)
      AGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCA                                                                                         <  SRR4302543.2153433/94‑1 (MQ=60)
      AGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCA                                                                                         >  SRR4302543.1686467/1‑94 (MQ=60)
       GCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCAC                                                                                        <  SRR4302543.4624958/94‑1 (MQ=60)
        CTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACC                                                                                       >  SRR4302543.5668578/1‑94 (MQ=60)
        CTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACC                                                                                       <  SRR4302543.309063/94‑1 (MQ=60)
         TGGACCGGACGCTGTGGATGTTGACCGTTAGCCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGNGNCACCGTGCCGGGCCGCCACCT                                                                                      >  SRR4302543.4030077/1‑94 (MQ=60)
         TGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCT                                                                                      >  SRR4302543.7840088/1‑94 (MQ=60)
         TGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCT                                                                                      >  SRR4302543.3386571/1‑94 (MQ=60)
         TGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCT                                                                                      <  SRR4302543.5860047/94‑1 (MQ=60)
         TGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCT                                                                                      >  SRR4302543.7955289/1‑94 (MQ=60)
          GGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTG                                                                                     <  SRR4302543.1069738/94‑1 (MQ=60)
          GGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTG                                                                                     >  SRR4302543.4052915/1‑94 (MQ=60)
          GGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTG                                                                                     <  SRR4302543.5531533/94‑1 (MQ=60)
             CCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGC                                                                                  >  SRR4302543.1800667/1‑94 (MQ=60)
             CCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGC                                                                                  >  SRR4302543.4264774/1‑94 (MQ=60)
              CCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCG                                                                                 >  SRR4302543.2475520/1‑94 (MQ=60)
              CCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCG                                                                                 <  SRR4302543.2197714/94‑1 (MQ=60)
                GACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCC                                                                               >  SRR4302543.92509/1‑94 (MQ=60)
                    CTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTT                                                                           >  SRR4302543.4454552/1‑94 (MQ=60)
                    CTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTT                                                                           >  SRR4302543.4820601/1‑94 (MQ=60)
                    CTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTT                                                                           <  SRR4302543.3084907/94‑1 (MQ=60)
                    CTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTT                                                                           >  SRR4302543.2288212/1‑94 (MQ=60)
                     TGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTT                                                                          >  SRR4302543.4856901/1‑94 (MQ=60)
                     TGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTT                                                                          >  SRR4302543.6174577/1‑94 (MQ=60)
                      GTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTT                                                                         >  SRR4302543.4959193/1‑94 (MQ=60)
                      GTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTT                                                                         >  SRR4302543.1186344/1‑94 (MQ=60)
                       TGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTT                                                                        <  SRR4302543.3309401/94‑1 (MQ=60)
                        GGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTC                                                                       <  SRR4302543.1514968/94‑1 (MQ=60)
                        GGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTC                                                                       >  SRR4302543.2164804/1‑94 (MQ=60)
                         GATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCG                                                                      <  SRR4302543.3929884/94‑1 (MQ=60)
                         GATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCG                                                                      <  SRR4302543.5197727/94‑1 (MQ=60)
                         GATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCG                                                                      <  SRR4302543.4286598/94‑1 (MQ=60)
                          ATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGC                                                                     >  SRR4302543.113061/1‑94 (MQ=60)
                           TGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCG                                                                    >  SRR4302543.5304915/1‑94 (MQ=60)
                             TGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTA                                                                  >  SRR4302543.2030941/1‑94 (MQ=60)
                             TGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTA                                                                  >  SRR4302543.5599534/1‑94 (MQ=60)
                             TGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTA                                                                  <  SRR4302543.4168553/94‑1 (MQ=60)
                              GGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTCA                                                                 >  SRR4302543.316207/1‑94 (MQ=60)
                               GACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAA                                                                >  SRR4302543.690042/1‑94 (MQ=60)
                                 CCTTTAACCTTATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGG                                                              <  SRR4302543.6637050/94‑1 (MQ=60)
                                 CCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGCCACCGTGCCGGCCCGCCACCTGCGCGCAAGTTTTTGGCGTAcaga                                                              >  SRR4302543.6180807/1‑90 (MQ=60)
                                 CCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGG                                                              >  SRR4302543.4523541/1‑94 (MQ=60)
                                 CCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGG                                                              >  SRR4302543.6180806/1‑94 (MQ=60)
                                 CCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGG                                                              <  SRR4302543.4269217/94‑1 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTTGGACACCGTGCCGGCCCGCCTCCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             <  SRR4302543.1413306/94‑1 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             >  SRR4302543.275034/1‑94 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             >  SRR4302543.3529267/1‑94 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             >  SRR4302543.3604518/1‑94 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             >  SRR4302543.6696081/1‑94 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             >  SRR4302543.3655200/1‑94 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             <  SRR4302543.1413307/94‑1 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             <  SRR4302543.1970862/94‑1 (MQ=60)
                                  CGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGA                                                             >  SRR4302543.2432428/1‑94 (MQ=60)
                                   GTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAG                                                            <  SRR4302543.1183725/94‑1 (MQ=60)
                                     TAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCG                                                          <  SRR4302543.5168832/94‑1 (MQ=60)
                                     TAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCG                                                          >  SRR4302543.3423877/1‑94 (MQ=60)
                                     TAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCG                                                          <  SRR4302543.5836414/94‑1 (MQ=60)
                                     TAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCG                                                          >  SRR4302543.2511539/1‑94 (MQ=60)
                                     TAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCG                                                          <  SRR4302543.4977185/94‑1 (MQ=60)
                                      AACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGG                                                         <  SRR4302543.7642014/94‑1 (MQ=60)
                                       ACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGT                                                        >  SRR4302543.651977/1‑94 (MQ=60)
                                        CCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTG                                                       <  SRR4302543.1446896/94‑1 (MQ=60)
                                        CCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTG                                                       <  SRR4302543.108166/94‑1 (MQ=60)
                                         CTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGT                                                      <  SRR4302543.1915028/94‑1 (MQ=60)
                                         CTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGT                                                      <  SRR4302543.6644464/94‑1 (MQ=60)
                                         CTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGAACCAGTTTTTCGCGTAAAGGAGCGGTGG                                                      >  SRR4302543.1013904/1‑94 (MQ=60)
                                           GATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGA                                                    >  SRR4302543.3902188/1‑94 (MQ=60)
                                           GATTTATCTGGCTTTAGCGATTGTNCNCANCCTTTGGGANACNGNGNCGGCCCNCCANCTGCNCGCCAnnnnnncgnntaanggnnnngngnnn                                                    >  SRR4302543.5759558/1‑68 (MQ=40)
                                            ATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGAT                                                   >  SRR4302543.1831968/1‑94 (MQ=60)
                                            ATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGAT                                                   <  SRR4302543.5249662/94‑1 (MQ=60)
                                            ATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGAT                                                   <  SRR4302543.6332321/94‑1 (MQ=60)
                                             TTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATG                                                  <  SRR4302543.3151967/94‑1 (MQ=60)
                                             TTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATG                                                  <  SRR4302543.1749505/94‑1 (MQ=60)
                                             TTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATG                                                  <  SRR4302543.7647128/94‑1 (MQ=60)
                                              TTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGC                                                 >  SRR4302543.3395483/1‑94 (MQ=60)
                                              TTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGC                                                 >  SRR4302543.7860037/1‑94 (MQ=60)
                                               TATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCA                                                >  SRR4302543.1981782/1‑94 (MQ=60)
                                                  CTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACC                                             <  SRR4302543.5526816/94‑1 (MQ=60)
                                                  CTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACC                                             >  SRR4302543.7970857/1‑94 (MQ=60)
                                                  CTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACC                                             >  SRR4302543.7899986/1‑94 (MQ=60)
                                                  CTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACC                                             >  SRR4302543.6721308/1‑94 (MQ=60)
                                                   TGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCT                                            <  SRR4302543.6532719/94‑1 (MQ=60)
                                                    GGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTT                                           <  SRR4302543.2806739/94‑1 (MQ=60)
                                                    GGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTT                                           >  SRR4302543.2745955/1‑94 (MQ=60)
                                                    GGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTT                                           <  SRR4302543.5958708/94‑1 (MQ=60)
                                                    GGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTT                                           >  SRR4302543.4401001/1‑94 (MQ=60)
                                                    GGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTT                                           <  SRR4302543.1202257/94‑1 (MQ=60)
                                                     GCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTT                                          >  SRR4302543.6907910/1‑94 (MQ=60)
                                                      CTTTAGCGATTGTTCTTAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTT                                         >  SRR4302543.6445384/1‑94 (MQ=60)
                                                       TTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTG                                        <  SRR4302543.6854280/94‑1 (MQ=60)
                                                       TTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTG                                        >  SRR4302543.507900/1‑94 (MQ=60)
                                                       TTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTG                                        <  SRR4302543.2406404/94‑1 (MQ=60)
                                                       TTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTG                                        <  SRR4302543.2656463/94‑1 (MQ=60)
                                                       TTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTG                                        >  SRR4302543.3178436/1‑94 (MQ=60)
                                                        TTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGG                                       <  SRR4302543.6697623/94‑1 (MQ=60)
                                                        TTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGG                                       >  SRR4302543.1248729/1‑94 (MQ=60)
                                                        TTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGG                                       >  SRR4302543.4329306/1‑94 (MQ=60)
                                                         TAGCGATTGTTCTCAACCTTTGGGACCCCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGC                                      <  SRR4302543.2616590/94‑1 (MQ=60)
                                                         TAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGC                                      >  SRR4302543.29328/1‑94 (MQ=60)
                                                          AGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCG                                     <  SRR4302543.5943535/94‑1 (MQ=60)
                                                            CGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTA                                   <  SRR4302543.2939131/94‑1 (MQ=60)
                                                            CGATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTA                                   >  SRR4302543.7033707/1‑94 (MQ=60)
                                                             GATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTAC                                  >  SRR4302543.4083658/1‑94 (MQ=60)
                                                             GATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTAC                                  <  SRR4302543.7447920/94‑1 (MQ=60)
                                                             GATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTAC                                  >  SRR4302543.436425/1‑94 (MQ=60)
                                                             GATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTAC                                  >  SRR4302543.7567539/1‑94 (MQ=60)
                                                             GATTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTAC                                  >  SRR4302543.7562030/1‑94 (MQ=60)
                                                               TTGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTT                                <  SRR4302543.6590509/94‑1 (MQ=60)
                                                                TGTTCTCAACCTTTGGGACACCTTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               >  SRR4302543.1372052/1‑94 (MQ=60)
                                                                TGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               <  SRR4302543.2847823/94‑1 (MQ=60)
                                                                TGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               <  SRR4302543.6814592/94‑1 (MQ=60)
                                                                TGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               <  SRR4302543.7155963/94‑1 (MQ=60)
                                                                TGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               >  SRR4302543.7177522/1‑94 (MQ=60)
                                                                TGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               <  SRR4302543.5296307/94‑1 (MQ=60)
                                                                TGTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               >  SRR4302543.1521743/1‑94 (MQ=60)
                                                                TGTGCGCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTG                               <  SRR4302543.5296305/94‑1 (MQ=60)
                                                                 GTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGC                              >  SRR4302543.2219508/1‑94 (MQ=60)
                                                                 GTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGA                              >  SRR4302543.557129/1‑94 (MQ=60)
                                                                 GTTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGCGTGATGCCACCTTTTGGCGTACTTGA                              >  SRR4302543.5339379/1‑94 (MQ=60)
                                                                  TTCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGAC                             >  SRR4302543.4029516/1‑94 (MQ=60)
                                                                   TCTCAACCTTTGGGACCCCGTGCCGACCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACC                            <  SRR4302543.5850233/94‑1 (MQ=60)
                                                                   TCTCAACCTTTGGGACACCGTGCCGGCCCGCCCCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACC                            <  SRR4302543.3892093/94‑1 (MQ=60)
                                                                   TCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACC                            >  SRR4302543.3339564/1‑94 (MQ=60)
                                                                   TCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACC                            >  SRR4302543.386169/1‑94 (MQ=60)
                                                                   TCTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACC                            <  SRR4302543.2952783/94‑1 (MQ=60)
                                                                    CTCAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCG                           >  SRR4302543.6270597/1‑94 (MQ=60)
                                                                      CAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCT                         >  SRR4302543.2737671/1‑94 (MQ=60)
                                                                      CAACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCT                         <  SRR4302543.903186/94‑1 (MQ=60)
                                                                       AACCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTA                        >  SRR4302543.591690/1‑94 (MQ=60)
                                                                         CCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATA                      <  SRR4302543.3001109/94‑1 (MQ=60)
                                                                         CCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATA                      >  SRR4302543.1647295/1‑94 (MQ=60)
                                                                         CCTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATA                      >  SRR4302543.1490131/1‑94 (MQ=60)
                                                                          CTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATAT                     <  SRR4302543.2093950/94‑1 (MQ=60)
                                                                          CTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATAT                     >  SRR4302543.7979984/1‑94 (MQ=60)
                                                                          CTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATAT                     <  SRR4302543.45711/94‑1 (MQ=60)
                                                                          CTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATAT                     <  SRR4302543.2376041/94‑1 (MQ=60)
                                                                          CTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATAT                     <  SRR4302543.1298184/94‑1 (MQ=60)
                                                                          CTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATAT                     <  SRR4302543.5731707/94‑1 (MQ=60)
                                                                          CTTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATAT                     >  SRR4302543.5747649/1‑94 (MQ=60)
                                                                           TTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATC                    >  SRR4302543.1664663/1‑94 (MQ=60)
                                                                           TTTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATC                    <  SRR4302543.5925737/94‑1 (MQ=60)
                                                                            TTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCG                   <  SRR4302543.5331088/94‑1 (MQ=60)
                                                                            TTGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCG                   <  SRR4302543.761591/94‑1 (MQ=60)
                                                                             TGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGG                  <  SRR4302543.7730763/94‑1 (MQ=60)
                                                                             TGGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGG                  <  SRR4302543.6769676/94‑1 (MQ=60)
                                                                              GGGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGA                 >  SRR4302543.1249178/1‑94 (MQ=60)
                                                                               GGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTA                >  SRR4302543.3349109/1‑94 (MQ=60)
                                                                               GGACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTA                >  SRR4302543.204915/1‑94 (MQ=60)
                                                                                GACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAA               <  SRR4302543.7487455/94‑1 (MQ=60)
                                                                                 ACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAA              >  SRR4302543.5911717/1‑94 (MQ=60)
                                                                                 ACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAA              <  SRR4302543.4055080/94‑1 (MQ=60)
                                                                                 ACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAA              >  SRR4302543.247518/1‑94 (MQ=60)
                                                                                 ACACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAA              <  SRR4302543.7503473/94‑1 (MQ=60)
                                                                                  CACCGTGCCGGCCCGGCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGCTGCAACCTGTTGGCGTACTTGACCGCTATATCGGTAAAA             >  SRR4302543.1224409/1‑94 (MQ=60)
                                                                                  CACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAA             >  SRR4302543.7342853/1‑94 (MQ=60)
                                                                                  CACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAA             >  SRR4302543.5889414/1‑94 (MQ=60)
                                                                                   ACCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAAC            >  SRR4302543.1239891/1‑94 (MQ=60)
                                                                                   ACCGTGCCGGCCCGACACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAAC            >  SRR4302543.6678431/1‑94 (MQ=60)
                                                                                    CCGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACT           <  SRR4302543.6597833/94‑1 (MQ=60)
                                                                                     CGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTA          >  SRR4302543.4053487/1‑94 (MQ=60)
                                                                                     CGTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTA          <  SRR4302543.4172300/94‑1 (MQ=60)
                                                                                      GTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAT         <  SRR4302543.1008031/94‑1 (MQ=60)
                                                                                      GTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAT         <  SRR4302543.7537575/94‑1 (MQ=60)
                                                                                      GTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAT         <  SRR4302543.6144859/94‑1 (MQ=60)
                                                                                      GTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAT         >  SRR4302543.4397665/1‑94 (MQ=60)
                                                                                      GTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAT         >  SRR4302543.5576218/1‑94 (MQ=60)
                                                                                      GTGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGCGATGCAACCTTTTGGCGTCCTTGACCGCTATATTGGTAAAACTAT         >  SRR4302543.4774823/1‑94 (MQ=60)
                                                                                       TGCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATT        <  SRR4302543.5338520/94‑1 (MQ=60)
                                                                                        GCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTT       >  SRR4302543.5278540/1‑94 (MQ=60)
                                                                                        GCCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTT       <  SRR4302543.4873615/94‑1 (MQ=60)
                                                                                         CCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT      <  SRR4302543.79725/94‑1 (MQ=60)
                                                                                         CCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT      <  SRR4302543.4495599/94‑1 (MQ=60)
                                                                                         CCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT      <  SRR4302543.1755393/94‑1 (MQ=60)
                                                                                         CCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT      <  SRR4302543.7446994/94‑1 (MQ=60)
                                                                                         CCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT      <  SRR4302543.1181957/94‑1 (MQ=60)
                                                                                         CCGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTT      <  SRR4302543.7036018/94‑1 (MQ=60)
                                                                                          CGGCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTC     <  SRR4302543.2330313/94‑1 (MQ=60)
                                                                                            GCCCGCCACCTGCGCGCCAGTTTTTCGCGTACAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCAC   <  SRR4302543.2436847/94‑1 (MQ=60)
                                                                                            GCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCAC   <  SRR4302543.4653054/94‑1 (MQ=60)
                                                                                            GCCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCAC   <  SRR4302543.2940511/94‑1 (MQ=60)
                                                                                             CCCGCCACCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACC  <  SRR4302543.5457575/94‑1 (MQ=60)
                                                                                             |                                                                                             
AAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACC  >  NC_000913/4484750‑4484936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: