Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,573,190 Δ1 bp coding (1487/1542 nt) yjiU → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,573,1890G.99.7% 1487.4 / ‑3.2 328coding (1486/1542 nt)yjiUhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base . (168/158);  total (170/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 353 total aligned reads displayed.

TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCC  >  NC_000913/4573097‑4573277
                                                                                            |                                                                                        
ttatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAg                                                                                          <  2:583999/93‑1 (MQ=255)
ttatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAg                                                                                          >  2:3647281/1‑93 (MQ=255)
 tatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga                                                                                         <  2:3724204/93‑2 (MQ=255)
   tCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgagc                                                                                       >  1:5787259/1‑90 (MQ=255)
   tCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgagc                                                                                       <  1:7029128/93‑4 (MQ=255)
     aaTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCat                                                                                    >  2:4406171/1‑93 (MQ=255)
      aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCata                                                                                   <  2:2110510/93‑1 (MQ=255)
      aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCata                                                                                   <  1:272754/93‑1 (MQ=255)
      aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCata                                                                                   <  1:6539148/93‑1 (MQ=255)
       tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAGACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCatat                                                                                  >  1:5902687/1‑93 (MQ=255)
       tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCatat                                                                                  >  1:4968303/1‑93 (MQ=255)
       tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCatat                                                                                  >  2:756049/1‑93 (MQ=255)
        aCATGGCTGAAAGAAGCATGGGCCGAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATg                                                                                 <  1:1672326/93‑1 (MQ=255)
        aCATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATg                                                                                 <  2:6106643/93‑1 (MQ=255)
        aCATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATg                                                                                 <  1:3751626/93‑1 (MQ=255)
         cATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGa                                                                                <  1:4796888/93‑1 (MQ=255)
          aTGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAGCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAc                                                                               <  1:2115681/93‑1 (MQ=255)
          aTGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAc                                                                               <  2:648562/93‑1 (MQ=255)
          aTGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAc                                                                               <  1:3379064/93‑1 (MQ=255)
           tGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACt                                                                              <  2:4675370/93‑1 (MQ=255)
           tGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACt                                                                              >  1:6908385/1‑93 (MQ=255)
           tGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACt                                                                              <  1:7162614/93‑1 (MQ=255)
           tGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACt                                                                              >  1:1296565/1‑93 (MQ=255)
            ggCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACtt                                                                             <  1:2386193/93‑1 (MQ=255)
             gCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttt                                                                            >  1:3929872/1‑93 (MQ=255)
             gCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttt                                                                            >  1:4587389/1‑93 (MQ=255)
              cTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACtttt                                                                           <  2:4198777/93‑1 (MQ=255)
               tGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttttt                                                                          >  1:2214170/1‑93 (MQ=255)
                gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTc                                                                         >  2:5971395/1‑93 (MQ=255)
                  aagaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCtt                                                                       >  1:1001789/1‑93 (MQ=255)
                  aagaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCtt                                                                       <  1:7715868/93‑1 (MQ=255)
                   agaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCttt                                                                      <  1:6808591/93‑1 (MQ=255)
                    gaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTa                                                                     <  1:7405849/93‑1 (MQ=255)
                      agCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAt                                                                   <  1:5139258/93‑1 (MQ=255)
                       gCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc                                                                  >  1:5560179/1‑93 (MQ=255)
                       gCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc                                                                  >  1:4097576/1‑93 (MQ=255)
                       gCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc                                                                  >  1:1487650/1‑93 (MQ=255)
                        cATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCa                                                                 >  2:3973617/1‑93 (MQ=255)
                        cATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCa                                                                 >  2:6600002/1‑93 (MQ=255)
                           gggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACgg                                                              >  2:2040884/1‑93 (MQ=255)
                            ggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGa                                                             <  1:7896034/93‑1 (MQ=255)
                             gCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAt                                                            <  1:204574/93‑1 (MQ=255)
                                cAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGcc                                                         >  2:3295328/1‑93 (MQ=255)
                                 aaCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCt                                                        <  2:2169924/93‑1 (MQ=255)
                                  aCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTg                                                       >  2:6254702/1‑93 (MQ=255)
                                  aCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTg                                                       >  2:1708250/1‑93 (MQ=255)
                                    ttACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGa                                                     >  1:1095000/1‑93 (MQ=255)
                                    ttACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGa                                                     <  2:2772418/93‑1 (MQ=255)
                                      tccGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAtt                                                   <  2:3927383/92‑1 (MQ=255)
                                      aCCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAtt                                                   <  2:744794/93‑1 (MQ=255)
                                         ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGc                                                <  1:4300040/93‑1 (MQ=255)
                                          gACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGcc                                               >  2:3178812/1‑93 (MQ=255)
                                           aCCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGccc                                              <  2:4725718/93‑1 (MQ=255)
                                              gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGt                                           >  2:6970338/1‑93 (MQ=255)
                                              gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGt                                           >  2:2677802/1‑93 (MQ=255)
                                               cTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTa                                          <  2:6423103/93‑1 (MQ=255)
                                                ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTaa                                         >  2:1217331/1‑93 (MQ=255)
                                                ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTaa                                         >  2:7930067/1‑93 (MQ=255)
                                                  gCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAcc                                       >  2:7343285/1‑93 (MQ=255)
                                                   cAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCa                                      <  2:4911371/93‑1 (MQ=255)
                                                    aGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCaa                                     >  1:1813385/1‑93 (MQ=255)
                                                     gTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAAt                                    <  2:2547772/93‑1 (MQ=255)
                                                        cTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaaa                                 <  2:1487521/93‑1 (MQ=255)
                                                        cTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaaa                                 >  2:3551492/1‑93 (MQ=255)
                                                         tGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaaaa                                >  1:2351180/1‑93 (MQ=255)
                                                             aCCCGATGGCAACCGTTTTTATTTACCGAAA‑GTGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCt                            >  1:5712971/1‑93 (MQ=255)
                                                              cccGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTg                           <  1:3716106/93‑1 (MQ=255)
                                                               ccGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg                          <  2:533931/93‑1 (MQ=255)
                                                                cGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGa                         >  1:3593751/1‑93 (MQ=255)
                                                                cGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGa                         <  1:87582/93‑1 (MQ=255)
                                                                  aTGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATa                       <  2:1776992/93‑1 (MQ=255)
                                                                  aTGCCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATa                       <  1:2973197/93‑1 (MQ=255)
                                                                   tGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAc                      <  2:5699282/93‑1 (MQ=255)
                                                                   tGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAc                      >  1:3100228/1‑93 (MQ=255)
                                                                   tGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAc                      >  1:7594562/1‑93 (MQ=255)
                                                                   tGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAc                      <  2:898499/93‑1 (MQ=255)
                                                                       aaCCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCt                  >  1:504744/1‑93 (MQ=255)
                                                                         ccGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGTCCGGTAACCAATAAAATCCTGGATACGGCttt                >  2:3086427/1‑93 (MQ=255)
                                                                         ccGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCttt                >  1:6662881/1‑93 (MQ=255)
                                                                         ccGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCttt                >  1:67960/1‑93 (MQ=255)
                                                                          cGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtttt               >  1:4408225/1‑93 (MQ=255)
                                                                          cGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtttt               <  1:4736386/93‑1 (MQ=255)
                                                                          cGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCtttt               <  1:1637094/93‑1 (MQ=255)
                                                                           gTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa              >  2:4541390/1‑93 (MQ=255)
                                                                           gTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa              >  2:3007592/1‑93 (MQ=255)
                                                                           gTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa              >  2:7779858/1‑93 (MQ=255)
                                                                           gTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa              >  1:7474368/1‑93 (MQ=255)
                                                                            tttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaa             <  2:5583134/93‑1 (MQ=255)
                                                                            tttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaa             <  2:8152/93‑1 (MQ=255)
                                                                             ttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaaa            >  1:5393666/1‑93 (MQ=255)
                                                                             ttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaaa            <  1:544128/93‑1 (MQ=255)
                                                                             ttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaaa            <  1:6217748/93‑1 (MQ=255)
                                                                                 atttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCt        <  1:7849584/93‑1 (MQ=255)
                                                                                 atttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCt        <  1:3487109/93‑1 (MQ=255)
                                                                                  tttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCtt       >  2:4116829/1‑93 (MQ=255)
                                                                                   ttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa      >  2:6801878/1‑93 (MQ=255)
                                                                                   ttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa      >  2:5154804/1‑93 (MQ=255)
                                                                                    taCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa     <  1:2510717/93‑1 (MQ=255)
                                                                                     aCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAc    <  2:561939/93‑1 (MQ=255)
                                                                                       cGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAccc  <  2:2441809/93‑1 (MQ=255)
                                                                                            |                                                                                        
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCC  >  NC_000913/4573097‑4573277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC  >  NC_000913/4573097‑4573283
                                                                                             |                                                                                             
TTATCAATACATGGCTGAAAGAAGCATTGGCCCAACTTACCGGACCGCTTGCAGTACTGAACCCCGATGGCAACCGTTTTTATTTACCGAAAGA                                                                                               <  SRR4302543.7218973/94‑1 (MQ=60)
  ATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGC                                                                                            >  SRR4302543.5839915/1‑94 (MQ=60)
   TCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCA                                                                                           >  SRR4302543.7484810/1‑94 (MQ=60)
   TCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCA                                                                                           >  SRR4302543.5669407/1‑94 (MQ=60)
   TCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCA                                                                                           <  SRR4302543.7096647/94‑1 (MQ=60)
    CAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCAT                                                                                          <  SRR4302543.2376140/94‑1 (MQ=60)
    CAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTCCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCAT                                                                                          >  SRR4302543.5330473/1‑94 (MQ=60)
      ATACATGGCTGAAAGAAGCGTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        <  SRR4302543.3600554/94‑1 (MQ=60)
      ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAGACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        >  SRR4302543.5956544/1‑94 (MQ=60)
      ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        <  SRR4302543.4620606/94‑1 (MQ=60)
      ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        <  SRR4302543.4763173/94‑1 (MQ=60)
      ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        >  SRR4302543.5013524/1‑94 (MQ=60)
      ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        <  SRR4302543.2691500/94‑1 (MQ=60)
      ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        <  SRR4302543.275151/94‑1 (MQ=60)
      ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATAT                                                                                        <  SRR4302543.6600708/94‑1 (MQ=60)
       TACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATG                                                                                       >  SRR4302543.3846569/1‑94 (MQ=60)
       TACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATG                                                                                       <  SRR4302543.7255057/94‑1 (MQ=60)
        ACATGGCTGAAAGAAGCATGGGCCGAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGA                                                                                      <  SRR4302543.1687313/94‑1 (MQ=60)
        ACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGA                                                                                      <  SRR4302543.3784429/94‑1 (MQ=60)
        ACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGA                                                                                      <  SRR4302543.3784633/94‑1 (MQ=60)
         CATGGCTGAAAGAAGCATGGTCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAC                                                                                     >  SRR4302543.5075476/1‑94 (MQ=60)
         CATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAC                                                                                     <  SRR4302543.4840732/94‑1 (MQ=60)
         CATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAC                                                                                     <  SRR4302543.2821062/94‑1 (MQ=60)
         CATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAC                                                                                     >  SRR4302543.6856629/1‑94 (MQ=60)
          ATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAGCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACT                                                                                    <  SRR4302543.2134618/94‑1 (MQ=60)
          ATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACT                                                                                    <  SRR4302543.3409390/94‑1 (MQ=60)
          ATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACT                                                                                    >  SRR4302543.1308096/1‑94 (MQ=60)
          ATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACT                                                                                    <  SRR4302543.172285/94‑1 (MQ=60)
          ATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACT                                                                                    >  SRR4302543.6973314/1‑94 (MQ=60)
           TGGCTGAAAGAAGCATGTGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTT                                                                                   <  SRR4302543.7678536/94‑1 (MQ=60)
           TGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTT                                                                                   <  SRR4302543.7232200/94‑1 (MQ=60)
            GGCTGAAAGAAGCATGTGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTT                                                                                  <  SRR4302543.4596485/94‑1 (MQ=60)
            GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGGAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTT                                                                                  >  SRR4302543.1521510/1‑94 (MQ=60)
            GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTT                                                                                  >  SRR4302543.4629059/1‑94 (MQ=60)
            GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTT                                                                                  <  SRR4302543.2407793/94‑1 (MQ=60)
            GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTT                                                                                  >  SRR4302543.3964567/1‑94 (MQ=60)
            GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTT                                                                                  >  SRR4302543.6743044/1‑94 (MQ=60)
              CTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTT                                                                                >  SRR4302543.2234124/1‑94 (MQ=60)
              CTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTT                                                                                <  SRR4302543.5568539/94‑1 (MQ=60)
               TGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTC                                                                               >  SRR4302543.7780793/1‑94 (MQ=60)
               TGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTC                                                                               >  SRR4302543.4831635/1‑94 (MQ=60)
               TGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTC                                                                               >  SRR4302543.669009/1‑94 (MQ=60)
                 AAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTT                                                                             >  SRR4302543.1010638/1‑94 (MQ=60)
                  AAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTT                                                                            <  SRR4302543.7788838/94‑1 (MQ=60)
                   AGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTA                                                                           <  SRR4302543.4824489/94‑1 (MQ=60)
                   AGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTA                                                                           <  SRR4302543.6872876/94‑1 (MQ=60)
                   AGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTA                                                                           <  SRR4302543.7493681/94‑1 (MQ=60)
                   AGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTA                                                                           <  SRR4302543.3595888/94‑1 (MQ=60)
                    GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAA                                                                          >  SRR4302543.2198341/1‑94 (MQ=60)
                    GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAA                                                                          <  SRR4302543.2001362/94‑1 (MQ=60)
                    GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAA                                                                          >  SRR4302543.2924794/1‑94 (MQ=60)
                    GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAA                                                                          <  SRR4302543.7476923/94‑1 (MQ=60)
                    GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAA                                                                          <  SRR4302543.7476924/94‑1 (MQ=60)
                    GAAGCATGGGCCCAACTTACCGGACCGCTTGCAATACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAA                                                                          >  SRR4302543.3775317/1‑94 (MQ=60)
                     AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT                                                                         <  SRR4302543.5510828/94‑1 (MQ=60)
                     AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT                                                                         <  SRR4302543.4220010/94‑1 (MQ=60)
                     AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT                                                                         >  SRR4302543.1012448/1‑94 (MQ=60)
                     AAGCATGGGCCCAACGTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAT                                                                         <  SRR4302543.5510829/94‑1 (MQ=60)
                      AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC                                                                        >  SRR4302543.5610744/1‑94 (MQ=60)
                      AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC                                                                        >  SRR4302543.1501036/1‑94 (MQ=60)
                      AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC                                                                        >  SRR4302543.4134380/1‑94 (MQ=60)
                      AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC                                                                        <  SRR4302543.7596094/94‑1 (MQ=60)
                      AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC                                                                        <  SRR4302543.5087134/94‑1 (MQ=60)
                      AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATC                                                                        <  SRR4302543.5185715/94‑1 (MQ=60)
                       GCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCA                                                                       >  SRR4302543.5164005/1‑94 (MQ=60)
                        CATGGGCCCAACTTACCGGACCGCTTGCAGTAGTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAC                                                                      >  SRR4302543.4790565/1‑94 (MQ=60)
                        CATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAC                                                                      <  SRR4302543.1534163/94‑1 (MQ=60)
                         ATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACG                                                                     >  SRR4302543.2249749/1‑94 (MQ=60)
                         ATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACG                                                                     >  SRR4302543.2109302/1‑94 (MQ=60)
                          TGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGG                                                                    >  SRR4302543.3038430/1‑94 (MQ=60)
                            GGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAT                                                                  <  SRR4302543.5948216/94‑1 (MQ=60)
                            GGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAT                                                                  <  SRR4302543.2394710/94‑1 (MQ=60)
                            GGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGAT                                                                  <  SRR4302543.7970277/94‑1 (MQ=60)
                             GCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGGTG                                                                 <  SRR4302543.179669/94‑1 (MQ=60)
                             GCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATG                                                                 <  SRR4302543.4862295/94‑1 (MQ=60)
                             GCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATG                                                                 >  SRR4302543.3905089/1‑94 (MQ=60)
                             GCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATG                                                                 <  SRR4302543.206307/94‑1 (MQ=60)
                               CCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCC                                                               >  SRR4302543.5754949/1‑94 (MQ=60)
                               CCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCC                                                               <  SRR4302543.158710/94‑1 (MQ=60)
                                CAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCT                                                              <  SRR4302543.4904259/94‑1 (MQ=60)
                                CAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCT                                                              >  SRR4302543.6888343/1‑94 (MQ=60)
                                 AACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTG                                                             <  SRR4302543.5127321/94‑1 (MQ=60)
                                  acgtgCCGGACGGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGG                                                            <  SRR4302543.6133699/89‑1 (MQ=60)
                                  ACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGG                                                            >  SRR4302543.7942264/1‑94 (MQ=60)
                                  ACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGG                                                            <  SRR4302543.6133697/94‑1 (MQ=60)
                                   CTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGT                                                           >  SRR4302543.4105492/1‑94 (MQ=60)
                                   CTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGA                                                           >  SRR4302543.1104852/1‑94 (MQ=60)
                                    TTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAT                                                          >  SRR4302543.7949598/1‑94 (MQ=60)
                                    TTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAT                                                          <  SRR4302543.2588530/94‑1 (MQ=60)
                                    TTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAT                                                          >  SRR4302543.1482552/1‑94 (MQ=60)
                                    TTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAT                                                          >  SRR4302543.6544092/1‑94 (MQ=60)
                                     TACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATT                                                         <  SRR4302543.6524628/94‑1 (MQ=60)
                                        CGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGC                                                      >  SRR4302543.2480497/1‑94 (MQ=60)
                                         GGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCC                                                     <  SRR4302543.4339112/94‑1 (MQ=60)
                                         GGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCC                                                     <  SRR4302543.4339111/94‑1 (MQ=60)
                                          GACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCC                                                    <  SRR4302543.7954870/94‑1 (MQ=60)
                                          GACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCC                                                    <  SRR4302543.3832255/94‑1 (MQ=60)
                                            CCGCTTGCAGTACTGAAACCCGATGGCATCCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGG                                                  <  SRR4302543.992153/94‑1 (MQ=60)
                                             CGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGT                                                 <  SRR4302543.3672226/94‑1 (MQ=60)
                                             CGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGT                                                 >  SRR4302543.787335/1‑94 (MQ=60)
                                             CGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGT                                                 >  SRR4302543.2983424/1‑94 (MQ=60)
                                              GCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTA                                                <  SRR4302543.6825538/94‑1 (MQ=60)
                                              GCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTA                                                >  SRR4302543.5461776/1‑94 (MQ=60)
                                               CTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAA                                               >  SRR4302543.5809118/1‑94 (MQ=60)
                                                TTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAC                                              >  SRR4302543.7057430/1‑94 (MQ=60)
                                                   CAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAA                                           >  SRR4302543.4050322/1‑94 (MQ=60)
                                                   CAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAA                                           >  SRR4302543.1829646/1‑94 (MQ=60)
                                                    AGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAAT                                          <  SRR4302543.1090015/94‑1 (MQ=60)
                                                    AGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAAT                                          <  SRR4302543.3720165/94‑1 (MQ=60)
                                                    AGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAAT                                          >  SRR4302543.1496823/1‑94 (MQ=60)
                                                     GTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATA                                         >  SRR4302543.4570784/1‑94 (MQ=60)
                                                     GTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATA                                         >  SRR4302543.5445743/1‑94 (MQ=60)
                                                       ACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAA                                       <  SRR4302543.5968025/94‑1 (MQ=60)
                                                        CTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAA                                      >  SRR4302543.2504341/1‑94 (MQ=60)
                                                        CTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAA                                      >  SRR4302543.2372501/1‑94 (MQ=60)
                                                        CTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAA                                      >  SRR4302543.879546/1‑94 (MQ=60)
                                                         TGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAT                                     <  SRR4302543.5637962/94‑1 (MQ=60)
                                                          GAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATC                                    >  SRR4302543.6911616/1‑94 (MQ=60)
                                                            AACCCGATGGCAACCGTTTTTATTTACCGAAA‑GTGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCT                                  >  SRR4302543.5765093/1‑94 (MQ=60)
                                                            AACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCT                                  >  SRR4302543.5765094/1‑94 (MQ=60)
                                                             ACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTG                                 <  SRR4302543.2268247/94‑1 (MQ=60)
                                                              CCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGG                                <  SRR4302543.3748787/94‑1 (MQ=60)
                                                               CCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGA                               >  SRR4302543.3625472/1‑94 (MQ=60)
                                                                CGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT                              <  SRR4302543.88394/94‑1 (MQ=60)
                                                                CGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT                              >  SRR4302543.529516/1‑94 (MQ=60)
                                                                CGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT                              <  SRR4302543.3275689/94‑1 (MQ=60)
                                                                 GATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATA                             <  SRR4302543.6963656/94‑1 (MQ=60)
                                                                  ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC                            <  SRR4302543.4684503/94‑1 (MQ=60)
                                                                  ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC                            >  SRR4302543.7666715/1‑94 (MQ=60)
                                                                  ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC                            >  SRR4302543.3128116/1‑94 (MQ=60)
                                                                  ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC                            >  SRR4302543.1672170/1‑94 (MQ=60)
                                                                  ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC                            <  SRR4302543.7875556/94‑1 (MQ=60)
                                                                  ATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC                            >  SRR4302543.6584279/1‑94 (MQ=60)
                                                                  ATGCCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATAC                            <  SRR4302543.3000192/94‑1 (MQ=60)
                                                                   TGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACG                           <  SRR4302543.4258708/94‑1 (MQ=60)
                                                                   TGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACG                           >  SRR4302543.3455934/1‑94 (MQ=60)
                                                                    GGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGG                          >  SRR4302543.1661008/1‑94 (MQ=60)
                                                                     GCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGC                         <  SRR4302543.5937256/94‑1 (MQ=60)
                                                                     GCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGC                         <  SRR4302543.7977782/94‑1 (MQ=60)
                                                                     GCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGC                         <  SRR4302543.2111691/94‑1 (MQ=60)
                                                                     GCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGC                         >  SRR4302543.2433132/1‑94 (MQ=60)
                                                                      CAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCT                        >  SRR4302543.509435/1‑94 (MQ=60)
                                                                      CAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCT                        >  SRR4302543.33989/1‑94 (MQ=60)
                                                                       AACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT                       >  SRR4302543.1733450/1‑94 (MQ=60)
                                                                       AACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT                       >  SRR4302543.7626858/1‑94 (MQ=60)
                                                                       AACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT                       >  SRR4302543.6986/1‑94 (MQ=60)
                                                                        ACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTT                      >  SRR4302543.6725789/1‑94 (MQ=60)
                                                                        ACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTT                      >  SRR4302543.6725788/1‑94 (MQ=60)
                                                                        ACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTT                      >  SRR4302543.68566/1‑94 (MQ=60)
                                                                        ACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTT                      >  SRR4302543.769749/1‑94 (MQ=60)
                                                                         CCGTTTTTATTTACCGAGA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTT                     <  SRR4302543.6872351/94‑1 (MQ=60)
                                                                         CCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTT                     >  SRR4302543.7524781/1‑94 (MQ=60)
                                                                         CCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTT                     >  SRR4302543.2213164/1‑94 (MQ=60)
                                                                         CCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTT                     >  SRR4302543.4448182/1‑94 (MQ=60)
                                                                         CCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTT                     <  SRR4302543.6872350/94‑1 (MQ=60)
                                                                          CGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTA                    <  SRR4302543.4779673/94‑1 (MQ=60)
                                                                          CGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTA                    <  SRR4302543.11176/94‑1 (MQ=60)
                                                                          CGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTA                    >  SRR4302543.7545933/1‑94 (MQ=60)
                                                                          CGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTA                    <  SRR4302543.1651701/94‑1 (MQ=60)
                                                                           GTTTTTATTTACCGAAA‑GAGCATATGACTTTTTTTTTAATCACGGATGCCTGGTTTTCCCGGGTACCAAATAAATTCCTGGATAGGGCTTTTAA                   >  SRR4302543.4340446/1‑94 (MQ=48)
                                                                           GTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAA                   <  SRR4302543.5322429/94‑1 (MQ=60)
                                                                           GTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAA                   <  SRR4302543.113939/94‑1 (MQ=60)
                                                                           GTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAA                   >  SRR4302543.4340445/1‑94 (MQ=60)
                                                                           GTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAA                   >  SRR4302543.1954965/1‑94 (MQ=60)
                                                                            TTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAA                  >  SRR4302543.2296686/1‑94 (MQ=60)
                                                                            TTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAA                  <  SRR4302543.7136764/94‑1 (MQ=60)
                                                                            TTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAA                  >  SRR4302543.5442706/1‑94 (MQ=60)
                                                                             TTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAG                 >  SRR4302543.7205605/1‑94 (MQ=60)
                                                                             TTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAG                 >  SRR4302543.3486331/1‑94 (MQ=60)
                                                                             TTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAG                 <  SRR4302543.1154207/94‑1 (MQ=60)
                                                                             TTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAG                 <  SRR4302543.6276445/94‑1 (MQ=60)
                                                                             TTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAG                 <  SRR4302543.549151/94‑1 (MQ=60)
                                                                             TTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAG                 >  SRR4302543.5955409/1‑94 (MQ=60)
                                                                              TTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGG                <  SRR4302543.5015647/94‑1 (MQ=60)
                                                                               TTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAGTAAAATCCTGGATACGGCTTTTAAAGGC               >  SRR4302543.4332547/1‑94 (MQ=60)
                                                                                TATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCT              >  SRR4302543.3411814/1‑94 (MQ=60)
                                                                                 ATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTT             <  SRR4302543.7923555/94‑1 (MQ=60)
                                                                                 ATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTT             <  SRR4302543.3518331/94‑1 (MQ=60)
                                                                                    TACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAC          <  SRR4302543.2533508/94‑1 (MQ=60)
                                                                                     ACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACC         >  SRR4302543.374354/1‑94 (MQ=60)
                                                                                       CGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCC       <  SRR4302543.2070516/94‑1 (MQ=60)
                                                                                        GAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCT      <  SRR4302543.6122489/94‑1 (MQ=60)
                                                                                        GAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCT      <  SRR4302543.3826490/94‑1 (MQ=60)
                                                                                          AAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTT     <  SRR4302543.6245562/94‑1 (MQ=60)
                                                                                          AAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTT     >  SRR4302543.5784783/1‑94 (MQ=60)
                                                                                           AAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA    <  SRR4302543.7012523/94‑1 (MQ=60)
                                                                                            AGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTAT   <  SRR4302543.3774072/94‑1 (MQ=60)
                                                                                             GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC  <  SRR4302543.5906177/94‑1 (MQ=60)
                                                                                             GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC  <  SRR4302543.4884766/94‑1 (MQ=60)
                                                                                             GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC  >  SRR4302543.5739938/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC  >  NC_000913/4573097‑4573283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑