Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,593,336	+G	intergenic (‑23/‑208)	yjjM ← / → yjjN	hypothetical protein/putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,593,335	1	.	G	100.0%	1025.2 / NA	321	intergenic (‑22/‑209)	yjjM/yjjN	hypothetical protein/putative oxidoreductase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (154/167); total (154/167)

Only 100 of 357 total aligned reads displayed.

TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATT  >  NC_000913/4593243‑4593423

tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                           >  1:314296/1‑93 (MQ=255)

tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                           >  1:127094/1‑93 (MQ=255)

tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                           >  2:3520766/1‑93 (MQ=255)

tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                           <  2:3564786/93‑1 (MQ=255)

    tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑ggaa                                                                                      >  1:1615582/1‑90 (MQ=255)

    tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑ggaa                                                                                      >  1:662588/1‑90 (MQ=255)

    tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑ggaa                                                                                      <  2:3803865/93‑4 (MQ=255)

         acgccgcATTCGCGTAAGTGGCTGAGAATATGCCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTggg                                                                                  >  2:4134627/5‑93 (MQ=255)

            ccgcATTCGCGTAAGTTGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGaa                                                                               <  2:3115816/92‑1 (MQ=255)

            ccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGaa                                                                               <  1:1791789/92‑1 (MQ=255)

             cgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAg                                                                              >  1:7761971/1‑93 (MQ=255)

                aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGa                                                                           >  2:5691333/1‑93 (MQ=255)

                aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGa                                                                           <  1:3920104/93‑1 (MQ=255)

                aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGa                                                                           <  1:3441966/93‑1 (MQ=255)

                 ttCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACCTTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGTat                                                                          >  2:4650783/1‑93 (MQ=255)

                 ttCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGat                                                                          >  1:4980587/1‑93 (MQ=255)

                  tCGGGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGata                                                                         <  2:4774006/93‑1 (MQ=255)

                  tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGata                                                                         <  1:4075799/93‑1 (MQ=255)

                  tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGata                                                                         <  1:3852667/93‑1 (MQ=255)

                  tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGata                                                                         <  2:2262078/93‑1 (MQ=255)

                    gcgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATg                                                                       <  2:1074467/93‑1 (MQ=255)

                    gcgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATg                                                                       >  2:2161333/1‑93 (MQ=255)

                     ggTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGa                                                                      <  2:5285996/92‑1 (MQ=255)

                     cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGa                                                                      <  2:7876270/93‑1 (MQ=255)

                      gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGGTGGAAGTGGGGAAGGGATATGAc                                                                     >  2:4313150/1‑93 (MQ=255)

                      gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     >  1:6211313/1‑93 (MQ=255)

                      gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     <  1:6051396/93‑1 (MQ=255)

                         aGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                  >  1:5298219/1‑93 (MQ=255)

                         aGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                  >  1:5151272/1‑93 (MQ=255)

                          gTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGGGGGGAAGGGATATGACCCcg                                                                 >  1:1099375/1‑93 (MQ=255)

                             gCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCgcgc                                                              >  2:6173539/1‑93 (MQ=255)

                               tGAGAATATGACGCACTGTGGTGCGGCTGGTGTTGTACATTTCCGCCAGCGGACTTTGCGATGGAAGTGGGGAAGGGAGATGACGCCGCGccc                                                            >  2:7695403/1‑92 (MQ=255)

                                gagaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                           <  1:4780837/93‑1 (MQ=255)

                                gagaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                           >  2:1424396/1‑93 (MQ=255)

                                gagaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                           <  2:4032362/93‑1 (MQ=255)

                                gagaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                           <  2:462782/93‑1 (MQ=255)

                                 agaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCata                                                          >  2:1009549/1‑93 (MQ=255)

                                 agaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCata                                                          <  2:3244045/93‑1 (MQ=255)

                                 agaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCata                                                          <  1:2173227/93‑1 (MQ=255)

                                 agaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCata                                                          <  1:5247405/93‑1 (MQ=255)

                                  gaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCatat                                                         >  1:6197393/1‑93 (MQ=255)

                                  gaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCatat                                                         <  2:1264090/93‑1 (MQ=255)

                                   aaTATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatc                                                        <  1:4268345/93‑1 (MQ=255)

                                   aaTATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatc                                                        >  2:7209851/1‑93 (MQ=255)

                                    atatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatca                                                       <  2:6494379/93‑1 (MQ=255)

                                    atatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatca                                                       >  1:6723578/1‑93 (MQ=255)

                                     tatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcat                                                      >  2:6230074/1‑93 (MQ=255)

                                      atGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcatc                                                     >  2:7541284/1‑93 (MQ=255)

                                        gACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCaa                                                   <  1:2473517/93‑1 (MQ=255)

                                         aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAt                                                  <  2:2082262/93‑1 (MQ=255)

                                         aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAt                                                  <  1:4122453/93‑1 (MQ=255)

                                         aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAt                                                  <  1:6388640/93‑1 (MQ=255)

                                          cGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATg                                                 >  2:2967605/1‑93 (MQ=255)

                                           gCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGCCCCCGCGCCATATCATCAATGa                                                <  2:1920348/93‑1 (MQ=255)

                                           gCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGa                                                <  1:459500/93‑1 (MQ=255)

                                             aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAcc                                              <  2:6990222/93‑1 (MQ=255)

                                             aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAcc                                              <  2:6056816/93‑1 (MQ=255)

                                             aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAcc                                              >  1:2804963/1‑93 (MQ=255)

                                               tgtgGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTg                                            >  1:2423609/1‑93 (MQ=255)

                                                gtggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTgg                                           >  1:5475891/1‑93 (MQ=255)

                                                gtggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTgg                                           >  2:4377378/1‑93 (MQ=255)

                                                  ggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGtt                                         >  1:1881796/1‑93 (MQ=255)

                                                    tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTaa                                       >  2:1662290/1‑93 (MQ=255)

                                                    tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTaa                                       >  1:745453/1‑93 (MQ=255)

                                                    tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTaa                                       >  1:5579991/1‑93 (MQ=255)

                                                    tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTaa                                       <  2:2822680/93‑1 (MQ=255)

                                                       ggCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTACTcc                                    >  1:7866996/1‑92 (MQ=255)

                                                       ggCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATca                                    >  1:2591435/1‑93 (MQ=255)

                                                       ggCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATca                                    <  1:2303836/93‑1 (MQ=255)

                                                        gCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATcac                                   <  2:2610288/93‑1 (MQ=255)

                                                         cTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATcaca                                  >  2:5855087/1‑93 (MQ=255)

                                                         cTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATcaca                                  >  2:6284683/1‑93 (MQ=255)

                                                         cTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATcaca                                  <  1:3585924/93‑1 (MQ=255)

                                                          tGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAt                                 <  2:2989568/93‑1 (MQ=255)

                                                           gATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGTTTAATCACAtt                                >  1:4365857/1‑93 (MQ=255)

                                                           gATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAtt                                >  1:1020733/1‑93 (MQ=255)

                                                               ttgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTgg                            >  2:2310876/1‑93 (MQ=255)

                                                                tgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGc                           <  2:5118440/93‑1 (MQ=255)

                                                                 gtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCg                          >  1:3025788/1‑93 (MQ=255)

                                                                  tACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGt                         <  2:4991375/93‑1 (MQ=255)

                                                                      tttCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAt                     <  1:5972672/93‑1 (MQ=255)

                                                                      tttCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAt                     >  1:6526680/1‑93 (MQ=255)

                                                                        tCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAttt                   <  1:1903735/93‑1 (MQ=255)

                                                                         ccGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAtttt                  <  1:3736055/93‑1 (MQ=255)

                                                                         ccGACAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAtttt                  <  2:2440593/93‑1 (MQ=255)

                                                                          cGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtg                 >  2:6935520/1‑93 (MQ=255)

                                                                             cAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa              <  1:707200/93‑1 (MQ=255)

                                                                             cAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa              >  1:7589113/1‑93 (MQ=255)

                                                                              aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa             <  2:3912345/93‑1 (MQ=255)

                                                                              aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa             <  1:1963689/93‑1 (MQ=255)

                                                                               gcgcACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc            >  1:1419560/1‑93 (MQ=255)

                                                                               gcgcACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc            <  1:791625/93‑1 (MQ=255)

                                                                                 gcACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGa          <  2:1812120/93‑1 (MQ=255)

                                                                                  cACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAc         >  2:3660865/1‑93 (MQ=255)

                                                                                   aCTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACt        >  2:6751699/1‑93 (MQ=255)

                                                                                   aCTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACt        >  2:7319957/1‑93 (MQ=255)

                                                                                     tttGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa      >  1:3282194/1‑93 (MQ=255)

                                                                                      ttGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCat     >  1:4463566/1‑93 (MQ=255)

                                                                                       tGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCata    <  2:6603360/93‑1 (MQ=255)

                                                                                        gCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCatat   <  1:7208729/93‑1 (MQ=255)

TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATT  >  NC_000913/4593243‑4593423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCT  >  NC_000913/4593243‑4593428

TGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGGTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑G                                                                                              <  SRR4302543.5183810/94‑1 (MQ=60)

TGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑G                                                                                              <  SRR4302543.510561/94‑1 (MQ=60)

TGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑G                                                                                              <  SRR4302543.2890191/94‑1 (MQ=60)

 GCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATCACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GG                                                                                             <  SRR4302543.6772444/94‑1 (MQ=60)

  CGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GGA                                                                                            >  SRR4302543.4121391/1‑94 (MQ=60)

   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                           <  SRR4302543.1990240/94‑4 (MQ=60)

   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                           >  SRR4302543.1629985/1‑91 (MQ=60)

   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                           >  SRR4302543.2741508/1‑91 (MQ=60)

   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                           >  SRR4302543.6681433/1‑91 (MQ=60)

   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                           >  SRR4302543.668679/1‑91 (MQ=60)

   GTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑Ggaa                                                                                           >  SRR4302543.2598226/1‑91 (MQ=60)

    TCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAG                                                                                           <  SRR4302543.2442883/94‑1 (MQ=60)

     CAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGT                                                                                          <  SRR4302543.5686501/94‑1 (MQ=60)

      AAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTG                                                                                         <  SRR4302543.6439673/94‑1 (MQ=60)

      AAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTG                                                                                         >  SRR4302543.3816690/1‑94 (MQ=60)

       AGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGG                                                                                        >  SRR4302543.2477534/1‑94 (MQ=60)

       AGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGG                                                                                        >  SRR4302543.2316994/1‑94 (MQ=60)

       AGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGG                                                                                        >  SRR4302543.5827858/1‑94 (MQ=60)

       AGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTATGGTGCGGCTGATGTTGTCCATTTCCGCCAGCGCACTTTGCGAT‑Ggaagagg                                                                                       <  SRR4302543.7085592/94‑8 (MQ=60)

        gacgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGG                                                                                       <  SRR4302543.5082441/89‑1 (MQ=60)

         acgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                      >  SRR4302543.7800026/5‑94 (MQ=60)

         acgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                      <  SRR4302543.3531903/90‑1 (MQ=60)

         acgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGG                                                                                      <  SRR4302543.3529314/90‑1 (MQ=60)

          cgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGA                                                                                     >  SRR4302543.1129836/4‑94 (MQ=60)

          cgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGA                                                                                     <  SRR4302543.4145534/91‑1 (MQ=60)

          cgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGA                                                                                     <  SRR4302543.7946847/91‑1 (MQ=60)

          cgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGA                                                                                     >  SRR4302543.4462868/4‑94 (MQ=60)

          cgcCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGGGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGA                                                                                     <  SRR4302543.3459112/91‑1 (MQ=60)

            CCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAG                                                                                   >  SRR4302543.7835225/1‑94 (MQ=60)

            CCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAG                                                                                   <  SRR4302543.1807827/94‑1 (MQ=60)

             CGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGG                                                                                  >  SRR4302543.7135141/1‑94 (MQ=60)

             CGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGG                                                                                  <  SRR4302543.7911519/94‑1 (MQ=60)

             CGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGG                                                                                  <  SRR4302543.5366445/94‑1 (MQ=60)

              GCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGG                                                                                 <  SRR4302543.3163914/94‑1 (MQ=60)

               CATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGGGGGGAAGGGA                                                                                >  SRR4302543.2384996/1‑94 (MQ=60)

                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                               <  SRR4302543.6187451/94‑1 (MQ=60)

                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                               <  SRR4302543.3954698/94‑1 (MQ=60)

                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                               <  SRR4302543.1808224/94‑1 (MQ=60)

                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                               >  SRR4302543.5025923/1‑94 (MQ=60)

                ATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGAT                                                                               <  SRR4302543.3472785/94‑1 (MQ=60)

                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCCGCGCCCTTTGCGATGGAAGTGGGGAAGGGATAT                                                                             <  SRR4302543.5336306/94‑1 (MQ=60)

                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                             <  SRR4302543.4112332/94‑1 (MQ=60)

                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                             <  SRR4302543.3237247/94‑1 (MQ=60)

                  TCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATAT                                                                             <  SRR4302543.3886710/94‑1 (MQ=60)

                   CGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCTGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATG                                                                            >  SRR4302543.1405244/1‑94 (MQ=60)

                    GCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGC                                                                           >  SRR4302543.2298295/1‑94 (MQ=60)

                    GCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGA                                                                           >  SRR4302543.625543/1‑94 (MQ=60)

                     CGTAAGTGGCTGAGAATATGACGCNCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGNTNGAAGTGGGGANGGNANATGAC                                                                          >  SRR4302543.7801381/1‑94 (MQ=60)

                     CGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAC                                                                          >  SRR4302543.6269962/1‑94 (MQ=60)

                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                         >  SRR4302543.6093977/1‑94 (MQ=60)

                      GTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACC                                                                         <  SRR4302543.6108677/94‑1 (MQ=60)

                       TAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCC                                                                        >  SRR4302543.1858890/1‑94 (MQ=60)

                        AAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCC                                                                       >  SRR4302543.5197829/1‑94 (MQ=60)

                        AAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCC                                                                       <  SRR4302543.1786475/94‑1 (MQ=60)

                        AAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCC                                                                       >  SRR4302543.5346043/1‑94 (MQ=60)

                         AGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCG                                                                      <  SRR4302543.2994788/94‑1 (MQ=60)

                         AGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGGGGGGAAGGGATATGACCCCG                                                                      >  SRR4302543.1109279/1‑94 (MQ=60)

                            GGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGC                                                                   >  SRR4302543.7216150/1‑94 (MQ=60)

                             GCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCC                                                                  <  SRR4302543.4624013/94‑1 (MQ=60)

                                GAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATA                                                               <  SRR4302543.2483811/94‑1 (MQ=60)

                                GAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATA                                                               >  SRR4302543.7796062/1‑94 (MQ=60)

                                GAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATA                                                               <  SRR4302543.4824530/94‑1 (MQ=60)

                                 AGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAT                                                              >  SRR4302543.6255928/1‑94 (MQ=60)

                                 AGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAT                                                              >  SRR4302543.3966223/1‑94 (MQ=60)

                                 AGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAT                                                              <  SRR4302543.2192696/94‑1 (MQ=60)

                                 AGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAT                                                              <  SRR4302543.3091488/94‑1 (MQ=60)

                                 AGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAT                                                              <  SRR4302543.5294706/94‑1 (MQ=60)

                                  GAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATC                                                             <  SRR4302543.5253910/94‑1 (MQ=60)

                                   AATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCA                                                            >  SRR4302543.6787113/1‑94 (MQ=60)

                                   AATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCA                                                            >  SRR4302543.6586960/1‑94 (MQ=60)

                                   AATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCA                                                            <  SRR4302543.4307125/94‑1 (MQ=60)

                                    ATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCAT                                                           >  SRR4302543.6788313/1‑94 (MQ=60)

                                    ATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCAT                                                           >  SRR4302543.7942990/1‑94 (MQ=60)

                                     TATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATC                                                          <  SRR4302543.1938651/94‑1 (MQ=60)

                                      ATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCA                                                         <  SRR4302543.3064631/94‑1 (MQ=60)

                                      ATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCA                                                         <  SRR4302543.3404197/94‑1 (MQ=60)

                                      ATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCA                                                         <  SRR4302543.4975086/94‑1 (MQ=60)

                                       TGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAA                                                        <  SRR4302543.7975584/94‑1 (MQ=60)

                                        GACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                       <  SRR4302543.6312375/94‑1 (MQ=60)

                                        GACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                       <  SRR4302543.2495866/94‑1 (MQ=60)

                                        GACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAT                                                       <  SRR4302543.4308263/94‑1 (MQ=60)

                                         ACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATG                                                      <  SRR4302543.6448774/94‑1 (MQ=60)

                                         ACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATG                                                      <  SRR4302543.4159613/94‑1 (MQ=60)

                                          CGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGA                                                     >  SRR4302543.7936852/1‑94 (MQ=60)

                                           GCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAC                                                    <  SRR4302543.7159744/94‑1 (MQ=60)

                                           GCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAC                                                    <  SRR4302543.463772/94‑1 (MQ=60)

                                           GCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAC                                                    >  SRR4302543.5969853/1‑94 (MQ=60)

                                           GCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAC                                                    >  SRR4302543.6463187/1‑94 (MQ=60)

                                            CACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACC                                                   >  SRR4302543.5343129/1‑94 (MQ=60)

                                            CACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACC                                                   >  SRR4302543.2830625/1‑94 (MQ=60)

                                            CACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACC                                                   <  SRR4302543.160562/94‑1 (MQ=60)

                                            CACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACC                                                   >  SRR4302543.1099734/1‑94 (MQ=60)

                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                  <  SRR4302543.7302815/94‑1 (MQ=60)

                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                  >  SRR4302543.4003099/1‑94 (MQ=60)

                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                  <  SRR4302543.2559772/94‑1 (MQ=60)

                                             ACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCT                                                  <  SRR4302543.6315305/94‑1 (MQ=60)

                                              CTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTG                                                 <  SRR4302543.2364748/94‑1 (MQ=60)

                                              CTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTG                                                 >  SRR4302543.3944499/1‑94 (MQ=60)

                                              CTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTG                                                 >  SRR4302543.2445486/1‑94 (MQ=60)

                                              CTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTG                                                 >  SRR4302543.3778636/1‑94 (MQ=60)

                                              CTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTG                                                 >  SRR4302543.1142176/1‑94 (MQ=60)

                                               TGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                >  SRR4302543.5602600/1‑94 (MQ=60)

                                               TGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                >  SRR4302543.5525512/1‑94 (MQ=60)

                                               TGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                >  SRR4302543.5525511/1‑94 (MQ=60)

                                               GGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGG                                                <  SRR4302543.2142326/94‑1 (MQ=60)

                                                GTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGT                                               >  SRR4302543.2485500/1‑94 (MQ=60)

                                                 TGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTT                                              >  SRR4302543.1898704/1‑94 (MQ=60)

                                                 TGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTT                                              <  SRR4302543.6826958/94‑1 (MQ=60)

                                                 TGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTT                                              <  SRR4302543.5518771/94‑1 (MQ=60)

                                                 TGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTT                                              <  SRR4302543.6567232/94‑1 (MQ=60)

                                                  GGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTA                                             >  SRR4302543.4302842/1‑94 (MQ=60)

                                                   GTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAA                                            >  SRR4302543.752086/1‑94 (MQ=60)

                                                   GTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAA                                            >  SRR4302543.5630790/1‑94 (MQ=60)

                                                     GCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATC                                          <  SRR4302543.6734312/94‑1 (MQ=60)

                                                      CGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTActcc                                         >  SRR4302543.7941075/1‑90 (MQ=60)

                                                      CGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCA                                         >  SRR4302543.4649587/1‑94 (MQ=60)

                                                      CGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCA                                         <  SRR4302543.7527162/94‑1 (MQ=60)

                                                      CGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCA                                         >  SRR4302543.2614983/1‑94 (MQ=60)

                                                      CGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCA                                         >  SRR4302543.3221484/1‑94 (MQ=60)

                                                       GGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCAC                                        <  SRR4302543.2324823/94‑1 (MQ=60)

                                                        GCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACA                                       >  SRR4302543.2917042/1‑94 (MQ=60)

                                                         CTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAT                                      <  SRR4302543.3617597/94‑1 (MQ=60)

                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGTTTAATCACATT                                     >  SRR4302543.4405404/1‑94 (MQ=60)

                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                     >  SRR4302543.1029764/1‑94 (MQ=60)

                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                     >  SRR4302543.3782181/1‑94 (MQ=60)

                                                          TGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATT                                     >  SRR4302543.1918204/1‑94 (MQ=60)

                                                            ATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGT                                   <  SRR4302543.733168/94‑1 (MQ=60)

                                                              GTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGG                                 >  SRR4302543.3513299/1‑94 (MQ=60)

                                                              GTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGG                                 >  SRR4302543.1187556/1‑94 (MQ=60)

                                                               TTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGC                                <  SRR4302543.5199218/94‑1 (MQ=60)

                                                               TTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGC                                >  SRR4302543.5238461/1‑94 (MQ=60)

                                                                TGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCG                               >  SRR4302543.1575012/1‑94 (MQ=60)

                                                                TGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCG                               >  SRR4302543.3053128/1‑94 (MQ=60)

                                                                 GTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGT                              >  SRR4302543.4323186/1‑94 (MQ=60)

                                                                  TACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGTGTA                             >  SRR4302543.2634924/1‑94 (MQ=60)

                                                                  TACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTA                             >  SRR4302543.7708997/1‑94 (MQ=60)

                                                                  TACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTA                             >  SRR4302543.100604/1‑94 (MQ=60)

                                                                  TACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTA                             <  SRR4302543.5990955/94‑1 (MQ=60)

                                                                   ACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAA                            >  SRR4302543.1970054/1‑94 (MQ=60)

                                                                     ATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAT                          >  SRR4302543.3743858/1‑94 (MQ=60)

                                                                     ATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAT                          >  SRR4302543.6588135/1‑94 (MQ=60)

                                                                     ATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAT                          <  SRR4302543.5559619/94‑1 (MQ=60)

                                                                      TTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATT                         <  SRR4302543.6027379/94‑1 (MQ=60)

                                                                      TTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATT                         <  SRR4302543.6027378/94‑1 (MQ=60)

                                                                       TTCCGCCATCGCACGTTTCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTT                        <  SRR4302543.2292535/94‑1 (MQ=60)

                                                                       TTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTT                        >  SRR4302543.3657900/1‑94 (MQ=60)

                                                                       TTCCGCCAGCGCACTGTGCGATAGAAGTGGGGAAGGGATATGTCCCCGCGCTATAGCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTT                        <  SRR4302543.3938013/94‑1 (MQ=60)

                                                                        TCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTT                       <  SRR4302543.1920867/94‑1 (MQ=60)

                                                                         CCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTG                      <  SRR4302543.3768920/94‑1 (MQ=60)

                                                                         CCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTG                      >  SRR4302543.83729/1‑94 (MQ=60)

                                                                          CGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGT                     <  SRR4302543.4515963/94‑1 (MQ=60)

                                                                           GCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTG                    >  SRR4302543.923766/1‑94 (MQ=60)

                                                                            CCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGA                   >  SRR4302543.7661227/1‑94 (MQ=60)

                                                                            CCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGA                   >  SRR4302543.2552072/1‑94 (MQ=60)

                                                                             CAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAA                  <  SRR4302543.713634/94‑1 (MQ=60)

                                                                             CAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAA                  >  SRR4302543.486401/1‑94 (MQ=60)

                                                                             CAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAA                  <  SRR4302543.7576898/94‑1 (MQ=60)

                                                                             CAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAA                  <  SRR4302543.624886/94‑1 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAT                 >  SRR4302543.6782767/1‑94 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 <  SRR4302543.1058380/94‑1 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 <  SRR4302543.1348739/94‑1 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 >  SRR4302543.1432406/1‑94 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 <  SRR4302543.1437287/94‑1 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 >  SRR4302543.4247633/1‑94 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 <  SRR4302543.1981302/94‑1 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 <  SRR4302543.4689488/94‑1 (MQ=60)

                                                                              AGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 <  SRR4302543.3891844/94‑1 (MQ=60)

                                                                              AGCGCACTTCGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAC                 <  SRR4302543.4689493/94‑1 (MQ=60)

                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACG                <  SRR4302543.6594365/94‑1 (MQ=60)

                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACG                <  SRR4302543.798583/94‑1 (MQ=60)

                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGAAAATTTTGTGAACG                >  SRR4302543.6262614/1‑94 (MQ=60)

                                                                               GCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATAAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACG                >  SRR4302543.6262613/1‑94 (MQ=60)

                                                                                CGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGA               <  SRR4302543.4447381/94‑1 (MQ=60)

                                                                                 GCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAC              <  SRR4302543.7473230/94‑1 (MQ=60)

                                                                                 GCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAC              >  SRR4302543.6070747/1‑94 (MQ=60)

                                                                                 GCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAC              >  SRR4302543.4502766/1‑94 (MQ=60)

                                                                                 GCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAC              <  SRR4302543.3741548/94‑1 (MQ=60)

                                                                                  CACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACT             >  SRR4302543.1724347/1‑94 (MQ=60)

                                                                                   ACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTC            >  SRR4302543.1850376/1‑94 (MQ=60)

                                                                                    CTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCA           >  SRR4302543.4220517/1‑94 (MQ=60)

                                                                                    CTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCA           >  SRR4302543.3311823/1‑94 (MQ=60)

                                                                                     TTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCAT          >  SRR4302543.4504014/1‑94 (MQ=60)

                                                                                     TTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCAT          <  SRR4302543.1946879/94‑1 (MQ=60)

                                                                                       TGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAT        <  SRR4302543.4026620/94‑1 (MQ=60)

                                                                                       TGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAT        <  SRR4302543.2020077/94‑1 (MQ=60)

                                                                                        GCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATT       <  SRR4302543.3370164/94‑1 (MQ=60)

                                                                                        GCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATT       <  SRR4302543.1912536/94‑1 (MQ=60)

                                                                                        GCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATT       <  SRR4302543.7278609/94‑1 (MQ=60)

                                                                                         CGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTT      >  SRR4302543.3607675/1‑94 (MQ=60)

                                                                                          GATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT     <  SRR4302543.2640892/94‑1 (MQ=60)

                                                                                          GATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT     >  SRR4302543.3511475/1‑94 (MQ=60)

                                                                                           atgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTC    >  SRR4302543.1626168/4‑94 (MQ=60)

                                                                                           atgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTC    <  SRR4302543.1881776/91‑1 (MQ=60)

                                                                                           atgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTAATATTTTC    >  SRR4302543.1993542/4‑94 (MQ=60)

                                                                                            tgGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCC   <  SRR4302543.2700680/92‑1 (MQ=60)

                                                                                            G‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCT  <  SRR4302543.6341340/94‑1 (MQ=60)

                                                                                            G‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCT  >  SRR4302543.495646/1‑94 (MQ=60)

TGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTTCCT  >  NC_000913/4593243‑4593428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`