Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTGCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAAA  >  NC_000913/2007423‑2007607
                                                                                            |                                                                                            
TTGCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTT                                                                                             >  SRR4302543.1006366/1‑94 (MQ=60)
TTGCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTT                                                                                             >  SRR4302543.4588230/1‑94 (MQ=60)
 TGCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTC                                                                                            >  SRR4302543.3921710/1‑94 (MQ=60)
  TCTGCGCTTATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCC                                                                                           <  SRR4302543.5778174/94‑1 (MQ=60)
  GCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCC                                                                                           <  SRR4302543.5778173/94‑1 (MQ=60)
   CTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCT                                                                                          <  SRR4302543.1735632/94‑1 (MQ=60)
   CTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCT                                                                                          <  SRR4302543.4362762/94‑1 (MQ=60)
    TGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTG                                                                                         >  SRR4302543.3372569/1‑94 (MQ=60)
    GGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTG                                                                                         <  SRR4302543.3247827/94‑1 (MQ=60)
     GCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGA                                                                                        >  SRR4302543.1056192/1‑94 (MQ=60)
      CGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGAT                                                                                       <  SRR4302543.6283242/94‑1 (MQ=60)
      CGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGCGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGAT                                                                                       >  SRR4302543.3600588/1‑94 (MQ=60)
       GCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATT                                                                                      >  SRR4302543.4560015/1‑94 (MQ=60)
       GCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATT                                                                                      >  SRR4302543.7712100/1‑94 (MQ=60)
          GATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACC                                                                                   <  SRR4302543.2506164/94‑1 (MQ=60)
           ATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCG                                                                                  >  SRR4302543.512055/1‑94 (MQ=60)
           ATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCG                                                                                  >  SRR4302543.2482710/1‑94 (MQ=60)
            TGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGC                                                                                 >  SRR4302543.1119/1‑94 (MQ=60)
             GTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCC                                                                                >  SRR4302543.6835015/1‑94 (MQ=60)
             GTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCC                                                                                >  SRR4302543.6464632/1‑94 (MQ=60)
              TTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCT                                                                               <  SRR4302543.4364519/94‑1 (MQ=60)
              TTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCT                                                                               >  SRR4302543.3354258/1‑94 (MQ=60)
              TTGATTATCGGCTGGGAAAAACACTTCTTCCGCCGTGCGGCACCGCAGGCTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCT                                                                               <  SRR4302543.1839056/94‑1 (MQ=60)
               TGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTT                                                                              >  SRR4302543.4380617/1‑94 (MQ=60)
                   TATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATA                                                                          >  SRR4302543.206092/1‑94 (MQ=60)
                     TCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATG                                                                        >  SRR4302543.2462425/1‑94 (MQ=60)
                        GCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTG                                                                     <  SRR4302543.34021/94‑1 (MQ=60)
                        GCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTG                                                                     <  SRR4302543.2553160/94‑1 (MQ=60)
                         CTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGG                                                                    >  SRR4302543.4136567/1‑94 (MQ=60)
                         CTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGG                                                                    >  SRR4302543.2002341/1‑94 (MQ=60)
                         CTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGG                                                                    <  SRR4302543.345112/94‑1 (MQ=60)
                         CTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGG                                                                    >  SRR4302543.6946523/1‑94 (MQ=60)
                         CTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGG                                                                    >  SRR4302543.2700133/1‑94 (MQ=60)
                          TGGGAAAACCGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGG                                                                   <  SRR4302543.2827857/94‑1 (MQ=60)
                          TGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTGCCTGATTACCGCCTTGATATGGTGGG                                                                   <  SRR4302543.2827858/94‑1 (MQ=60)
                           GGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGCCTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTCCCGCCTTGATATGGTGGGT                                                                  <  SRR4302543.6356372/94‑1 (MQ=60)
                           GGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGCGGGT                                                                  >  SRR4302543.4423800/1‑94 (MQ=60)
                              AAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGCTCGCATGCAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAA                                                               >  SRR4302543.760779/1‑94 (MQ=60)
                               AAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAAC                                                              >  SRR4302543.5164750/1‑94 (MQ=60)
                               AAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAAC                                                              >  SRR4302543.6501014/1‑94 (MQ=60)
                                AAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACC                                                             <  SRR4302543.1706918/94‑1 (MQ=60)
                                AAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATAGCTCCTGATTACCGCCTTGATATGGTGGGAGAAAC                                                             >  SRR4302543.6963003/1‑94 (MQ=60)
                                 AATGCTTCTTCCGCCGTGCGGCAACGCAGACTGGTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCC                                                            <  SRR4302543.974128/94‑1 (MQ=60)
                                 AACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCC                                                            <  SRR4302543.7616323/94‑1 (MQ=60)
                                 AACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCC                                                            >  SRR4302543.5649840/1‑94 (MQ=60)
                                 AACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCC                                                            >  SRR4302543.3762926/1‑94 (MQ=60)
                                 AACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCC                                                            <  SRR4302543.169978/94‑1 (MQ=60)
                                  ACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCT                                                           <  SRR4302543.7550245/94‑1 (MQ=60)
                                  ACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCT                                                           >  SRR4302543.2785273/1‑94 (MQ=60)
                                   CGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTG                                                          <  SRR4302543.3506716/94‑1 (MQ=60)
                                   CGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTG                                                          <  SRR4302543.5342725/94‑1 (MQ=60)
                                   CGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTG                                                          >  SRR4302543.4035582/1‑94 (MQ=60)
                                   CGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTC                                                          >  SRR4302543.766859/1‑94 (MQ=60)
                                   CGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGGGAACCCTG                                                          >  SRR4302543.1782181/1‑94 (MQ=60)
                                    GCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGC                                                         <  SRR4302543.2045741/94‑1 (MQ=60)
                                    GCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCATGC                                                         >  SRR4302543.1092975/1‑94 (MQ=60)
                                       TCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCT                                                      >  SRR4302543.1503978/1‑94 (MQ=60)
                                       TCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCT                                                      >  SRR4302543.6611586/1‑94 (MQ=60)
                                        CTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTT                                                     <  SRR4302543.6544513/94‑1 (MQ=60)
                                        CTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTT                                                     <  SRR4302543.7918920/94‑1 (MQ=60)
                                        CTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTT                                                     >  SRR4302543.108315/1‑94 (MQ=60)
                                          TCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTAT                                                   <  SRR4302543.3371613/94‑1 (MQ=60)
                                           CCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATC                                                  <  SRR4302543.6761763/94‑1 (MQ=60)
                                            CGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCC                                                 >  SRR4302543.6504062/1‑94 (MQ=60)
                                              CCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGG                                               >  SRR4302543.6253418/1‑94 (MQ=60)
                                               CGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGC                                              >  SRR4302543.5386472/1‑94 (MQ=60)
                                               CGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGC                                              >  SRR4302543.7542367/1‑94 (MQ=60)
                                                GTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGGGAACCCTGCCCTTATCCGGCA                                             >  SRR4302543.1445303/1‑94 (MQ=60)
                                                  GCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGT                                           <  SRR4302543.3032287/94‑1 (MQ=60)
                                                  GCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGCGAACCCTGCCCTTATCCCGCAGT                                           >  SRR4302543.3163633/1‑94 (MQ=60)
                                                    GGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCG                                         >  SRR4302543.1147832/1‑94 (MQ=60)
                                                    GGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCG                                         >  SRR4302543.5368672/1‑94 (MQ=60)
                                                    GGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCG                                         <  SRR4302543.4573949/94‑1 (MQ=60)
                                                      CACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCA                                       <  SRR4302543.7181454/94‑1 (MQ=60)
                                                      CACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCA                                       <  SRR4302543.7181455/94‑1 (MQ=60)
                                                       ACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAA                                      <  SRR4302543.5520512/94‑1 (MQ=60)
                                                        CCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAAC                                     <  SRR4302543.1787888/94‑1 (MQ=60)
                                                         CGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCTCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACC                                    >  SRR4302543.6820000/1‑94 (MQ=60)
                                                         CGCAGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACC                                    <  SRR4302543.6306346/94‑1 (MQ=60)
                                                            AGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTT                                 >  SRR4302543.1754452/1‑94 (MQ=60)
                                                            AGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTT                                 >  SRR4302543.7338265/1‑94 (MQ=60)
                                                            AGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTT                                 >  SRR4302543.175912/1‑94 (MQ=60)
                                                            AGACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTT                                 <  SRR4302543.6919285/94‑1 (MQ=60)
                                                              ACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGA                               >  SRR4302543.1778658/1‑94 (MQ=60)
                                                              ACTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGA                               >  SRR4302543.4698021/1‑94 (MQ=60)
                                                               CTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAG                              <  SRR4302543.4495513/94‑1 (MQ=60)
                                                               CTGCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAG                              >  SRR4302543.7267670/1‑94 (MQ=60)
                                                                 GCTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGC                            >  SRR4302543.7814106/1‑94 (MQ=60)
                                                                  CTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCG                           >  SRR4302543.7551101/1‑94 (MQ=60)
                                                                  CTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCG                           >  SRR4302543.4345728/1‑94 (MQ=60)
                                                                  CTAAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCG                           >  SRR4302543.2981916/1‑94 (MQ=60)
                                                                   TAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGA                          <  SRR4302543.296315/94‑1 (MQ=60)
                                                                   TAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGA                          >  SRR4302543.6411478/1‑94 (MQ=60)
                                                                    AAGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGAT                         <  SRR4302543.7125724/94‑1 (MQ=60)
                                                                     AGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTTGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATG                        >  SRR4302543.2109100/1‑94 (MQ=60)
                                                                     AGGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATG                        <  SRR4302543.1934079/94‑1 (MQ=60)
                                                                      GGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGC                       >  SRR4302543.2916767/1‑94 (MQ=60)
                                                                      GGAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTTCCCTTATCCGGCAGTCGCAACCCTTGGTGCGATGC                       >  SRR4302543.5839891/1‑94 (MQ=60)
                                                                       GAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCC                      <  SRR4302543.209411/94‑1 (MQ=60)
                                                                       GAGATCGCATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCC                      <  SRR4302543.1305104/94‑1 (MQ=60)
                                                                         GATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGC                    >  SRR4302543.3931884/1‑94 (MQ=60)
                                                                          ATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCA                   <  SRR4302543.3261132/94‑1 (MQ=60)
                                                                          ATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCA                   >  SRR4302543.3100135/1‑94 (MQ=60)
                                                                          ATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCA                   <  SRR4302543.4652517/94‑1 (MQ=60)
                                                                            CGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGT                 <  SRR4302543.4410737/94‑1 (MQ=60)
                                                                            CGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGT                 <  SRR4302543.882396/94‑1 (MQ=60)
                                                                               ATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGCTGCCGCAGTTAA              >  SRR4302543.967889/1‑94 (MQ=60)
                                                                               ATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTCA              >  SRR4302543.967888/1‑94 (MQ=60)
                                                                               ATGAAAAATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAA              <  SRR4302543.7485569/94‑1 (MQ=60)
                                                                                     AATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAG        <  SRR4302543.7786290/94‑1 (MQ=60)
                                                                                     AATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAG        <  SRR4302543.1173448/94‑1 (MQ=60)
                                                                                     AATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAG        <  SRR4302543.3650872/94‑1 (MQ=60)
                                                                                     AATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAG        <  SRR4302543.7418147/94‑1 (MQ=60)
                                                                                     AATATCGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAG        <  SRR4302543.7418146/94‑1 (MQ=60)
                                                                                          CGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAA   <  SRR4302543.2869930/94‑1 (MQ=60)
                                                                                          CGCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAA   <  SRR4302543.5288238/94‑1 (MQ=60)
                                                                                           GTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAAA  >  SRR4302543.4690265/1‑94 (MQ=60)
                                                                                           GTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAAA  <  SRR4302543.842443/94‑1 (MQ=60)
                                                                                           GCTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAAA  >  SRR4302543.4239285/1‑94 (MQ=60)
                                                                                            |                                                                                            
TTGCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAAA  >  NC_000913/2007423‑2007607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑