Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
79,855 |
A→G |
V337A (GTG→GCG) |
leuC ← |
3‑isopropylmalate isomerase (dehydratase) subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 79,855 | 0 | A | G | 99.4%
| 475.0
/ NA
| 154 | V337A (GTG→GCG) | leuC | 3‑isopropylmalate isomerase (dehydratase) subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (80/73); minor base T (0/1); total (80/74) |
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 159 total aligned reads displayed.
ACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCACTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCC > NC_000913/79765‑79944
|
aCTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCt < 2:4214313/93‑1 (MQ=255)
aCTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCt > 1:1145207/1‑93 (MQ=255)
aCTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCt > 1:1941158/1‑93 (MQ=255)
cTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCtt > 1:3095842/1‑93 (MQ=255)
cTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCtt > 1:433067/1‑93 (MQ=255)
ttttCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTc > 2:2533188/1‑93 (MQ=255)
tttCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCg < 1:4153569/93‑1 (MQ=255)
cGCTCTTTGGCGATCTCCGCTGCCGATCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTc < 1:2330304/93‑1 (MQ=255)
gctgtttGGCGACCTCCGCTGCCGCGCGTAAATCTCCAATGCGGGAGTTGGTACAGCAACCGATAAACGCTTTGTCGATAGCCGCTTCGGTCa < 2:44250/89‑1 (MQ=255)
gCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCa > 1:2061710/1‑93 (MQ=255)
ccTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGc > 1:4157706/1‑93 (MQ=255)
tttGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCgg > 1:4280639/1‑93 (MQ=255)
ttGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGa > 2:1286559/1‑93 (MQ=255)
ttGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGACGCTTCGGTCAGCGGa > 1:1300009/1‑93 (MQ=255)
tcggCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGa < 2:2574128/91‑1 (MQ=255)
tGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGaa < 2:1145207/93‑1 (MQ=255)
tGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGaa < 1:3279382/93‑1 (MQ=255)
ggCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAAt < 1:4252800/93‑1 (MQ=255)
ggCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAAt > 2:2013116/1‑93 (MQ=255)
ggCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAAt < 2:940038/93‑1 (MQ=255)
cGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATAc < 1:3165675/93‑1 (MQ=255)
cGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATAc < 2:63192/93‑1 (MQ=255)
ctcCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCgg < 1:653440/93‑1 (MQ=255)
ctcCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCgg > 2:4025007/1‑93 (MQ=255)
ctcCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCgg > 2:3704632/1‑93 (MQ=255)
tcCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGt > 2:2115870/1‑93 (MQ=255)
tcCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGt > 2:410284/1‑93 (MQ=255)
tcCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGt > 2:2879019/1‑93 (MQ=255)
gCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTc < 2:235601/93‑1 (MQ=255)
gCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTc > 2:3553957/1‑93 (MQ=255)
cTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCa < 2:3024712/93‑1 (MQ=255)
tGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAg > 2:2601821/1‑93 (MQ=255)
gCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGc < 2:35896/93‑1 (MQ=255)
gCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGc > 2:3888509/1‑93 (MQ=255)
cgcgcgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGccc < 1:331250/93‑1 (MQ=255)
cgcgcgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGccc > 1:3901481/1‑93 (MQ=255)
cgcgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCa < 2:2012748/93‑1 (MQ=255)
cgcgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCa < 1:2765692/93‑1 (MQ=255)
gcgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCat > 1:2818610/1‑93 (MQ=255)
cgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCata < 2:1751208/93‑1 (MQ=255)
cgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCata < 1:4536950/93‑1 (MQ=255)
cgTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCata < 1:3515313/93‑1 (MQ=255)
gTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCatat > 2:550580/1‑93 (MQ=255)
tAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCAtata > 2:1459425/1‑93 (MQ=255)
tAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCAtata > 1:26615/1‑93 (MQ=255)
aaTCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAgg > 1:3730200/1‑93 (MQ=255)
aTCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGc > 1:181935/1‑93 (MQ=255)
tCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCTCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGcc < 1:3052558/93‑1 (MQ=255)
tttCAATGCGCTAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCa < 2:4445124/92‑1 (MQ=255)
ttCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAg < 1:1594903/93‑1 (MQ=255)
ttCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAg > 1:2253363/1‑93 (MQ=255)
tCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAgc > 2:3964702/1‑93 (MQ=255)
aTGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCt < 1:3172098/93‑1 (MQ=255)
gcgcGAGTTGGTACAGAAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATGCCCGGTTTCAGCCCCATATAGGCCAGCGCttt < 1:2143508/93‑1 (MQ=255)
cgcgAGGTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCtttt < 2:451575/93‑1 (MQ=255)
gcgAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCttttt > 1:528522/1‑93 (MQ=255)
gcgAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCttttt < 2:736943/93‑1 (MQ=255)
gcgAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCttttt > 2:3217330/1‑93 (MQ=255)
cgAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTc < 1:650268/93‑1 (MQ=255)
cgAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTc < 1:2501706/93‑1 (MQ=255)
cgAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTc < 2:1418837/93‑1 (MQ=255)
cgAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTc < 2:4543508/93‑1 (MQ=255)
gAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCt > 2:207123/1‑93 (MQ=255)
gAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCt < 2:3156819/93‑1 (MQ=255)
gAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCt < 2:10873/93‑1 (MQ=255)
gAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCt > 1:1258995/1‑93 (MQ=255)
tGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCg < 2:3480928/93‑1 (MQ=255)
tGGTACAGGAACAGATAAACACTTGGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCg < 1:47814/93‑1 (MQ=255)
tACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGAcg > 1:3462249/1‑93 (MQ=255)
ggAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGAcgcgcg > 1:4171740/1‑93 (MQ=255)
ggAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGAcgcgcg > 2:3163111/1‑93 (MQ=255)
gAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATAACCGGTTTCAGCCCCATATAGTCCAGCGCTTTTTATTCCGACGCGCGt > 1:37477/1‑93 (MQ=255)
cGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCaa > 2:3901688/1‑93 (MQ=255)
gATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAAc > 1:3438386/1‑93 (MQ=255)
gATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAAc < 2:3422111/93‑1 (MQ=255)
aTAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAAcc < 1:84858/93‑1 (MQ=255)
aTAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAAcc > 2:2988202/1‑93 (MQ=255)
tAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCg < 1:1025348/93‑1 (MQ=255)
tAAACACTTTGTCGATAGACGCTTCGGTCAGCGGAATACCCGGGTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCg > 2:185059/1‑93 (MQ=255)
tAAACACTTCGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCg < 2:3763957/93‑1 (MQ=255)
aaCACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGa > 1:1591735/1‑93 (MQ=255)
acacTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGAt < 1:217835/93‑1 (MQ=255)
acacTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGAt < 2:3744029/93‑1 (MQ=255)
cacTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATc < 2:4234240/93‑1 (MQ=255)
acTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCg > 1:2245187/1‑93 (MQ=255)
acTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCg > 2:2395325/1‑93 (MQ=255)
acTTTGTCGATAGACGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCCTATAGGCCCGCGCTTTTTCTGCCGACGCGCGTTCAACCCGATCg > 1:302821/1‑93 (MQ=255)
cTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCgg > 2:751671/1‑93 (MQ=255)
ttGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCa > 1:1033948/1‑93 (MQ=255)
tGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCaa > 1:3351156/1‑93 (MQ=255)
gTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCaaa < 1:1505397/93‑1 (MQ=255)
tCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAAc > 1:2593656/1‑93 (MQ=255)
tCGATAGCCGCGTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAAc < 2:4661541/93‑1 (MQ=255)
cGATAGCCGCTTCGGTCAGCGGAATCCCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACg < 2:3385711/93‑1 (MQ=255)
gATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGa < 1:2453477/93‑1 (MQ=255)
aTAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGaa < 1:1150354/93‑1 (MQ=255)
tAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAg > 2:3651151/1‑93 (MQ=255)
tgCCGCTTCGGTCAGCGTAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCACCCGGATCGGCAAACGAAGc < 2:567212/92‑1 (MQ=255)
aGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGc > 1:4330287/1‑93 (MQ=255)
gCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGcc > 1:386650/1‑93 (MQ=255)
|
ACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCACTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCC > NC_000913/79765‑79944
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCACTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCGGAT > NC_000913/79763‑79948
|
CGACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGC > SRR4302535.564286/1‑94 (MQ=60)
GACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCT > SRR4302535.1955144/1‑94 (MQ=60)
GACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCT > SRR4302535.1153368/1‑94 (MQ=60)
ACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTT > SRR4302535.3117403/1‑94 (MQ=60)
ACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTT > SRR4302535.436084/1‑94 (MQ=60)
TTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGG < SRR4302535.4182008/94‑1 (MQ=60)
TTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGG > SRR4302535.2348404/1‑94 (MQ=60)
TCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTC > SRR4302535.1095/1‑94 (MQ=60)
CGCTCTTTGGCGATCTCCGCTGCCGATCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCA < SRR4302535.2346971/94‑1 (MQ=60)
CGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCA > SRR4302535.1169546/1‑94 (MQ=60)
CGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCA < SRR4302535.1753661/94‑1 (MQ=60)
CGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCA > SRR4302535.2076568/1‑94 (MQ=60)
GCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAG < SRR4302535.364269/94‑1 (MQ=60)
CCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGC > SRR4302535.4186168/1‑94 (MQ=60)
CCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCG > SRR4302535.627866/1‑94 (MQ=60)
CTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGG > SRR4302535.4309930/1‑94 (MQ=60)
TTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGACGCTTCGGTCAGCGGA > SRR4302535.1309275/1‑94 (MQ=60)
TGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAAT < SRR4302535.3302157/94‑1 (MQ=60)
GGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATA < SRR4302535.4281939/94‑1 (MQ=60)
CGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACC < SRR4302535.3187617/94‑1 (MQ=60)
GATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCC > SRR4302535.3390675/1‑94 (MQ=60)
GATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCC > SRR4302535.2710306/1‑94 (MQ=60)
CTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGT < SRR4302535.4064479/94‑1 (MQ=60)
CTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGT < SRR4302535.658002/94‑1 (MQ=60)
TGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGC < SRR4302535.3057425/94‑1 (MQ=60)
GCCGCTCGTAAATCTTCAATGCGCGATTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCC < SRR4302535.4324203/94‑1 (MQ=60)
CCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCC > SRR4302535.3928205/1‑94 (MQ=60)
CGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCC < SRR4302535.333546/94‑1 (MQ=60)
CGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCAT > SRR4302535.2838631/1‑94 (MQ=60)
CGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCAT < SRR4302535.2785388/94‑1 (MQ=60)
CGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATAT < SRR4302535.4567987/94‑1 (MQ=60)
CGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATAT < SRR4302535.3539739/94‑1 (MQ=60)
GTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATA > SRR4302535.26822/1‑94 (MQ=60)
TAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAG < SRR4302535.2081449/94‑1 (MQ=60)
AAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGG > SRR4302535.3756031/1‑94 (MQ=60)
AATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGC > SRR4302535.183194/1‑94 (MQ=60)
AATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCAGGTTTCAGCCCCATATAGGC > SRR4302535.3518820/1‑94 (MQ=60)
TCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCTCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCA < SRR4302535.3073935/94‑1 (MQ=60)
CTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAG > SRR4302535.2269411/1‑94 (MQ=60)
TTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGC > SRR4302535.3005430/1‑94 (MQ=60)
TTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGC > SRR4302535.4185347/1‑94 (MQ=60)
TTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGC < SRR4302535.1606408/94‑1 (MQ=60)
AATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCT > SRR4302535.1394328/1‑94 (MQ=60)
ATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTT < SRR4302535.3194056/94‑1 (MQ=60)
GCGCGAGTTGGTACAGAAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATGCCCGGTTTCAGCCCCATATAGGCCAGCGCTTTT < SRR4302535.2158926/94‑1 (MQ=60)
CGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTT > SRR4302535.532215/1‑94 (MQ=60)
CGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCT < SRR4302535.654805/94‑1 (MQ=60)
CGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCT > SRR4302535.1268003/1‑94 (MQ=60)
CGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCT < SRR4302535.2519749/94‑1 (MQ=60)
CGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGATTTTTCT > SRR4302535.804099/1‑94 (MQ=60)
GTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCG > SRR4302535.864756/1‑94 (MQ=60)
TGGTACAGGAACAGATAAACACTTGGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGA < SRR4302535.48174/94‑1 (MQ=60)
GTACAGGAACCGATAAGCACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACG < SRR4302535.2238194/94‑1 (MQ=60)
GTACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACG > SRR4302535.3486318/1‑94 (MQ=60)
ACAGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCG < SRR4302535.329459/94‑1 (MQ=60)
AGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCG > SRR4302535.4236763/1‑94 (MQ=60)
AGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCG > SRR4302535.4200299/1‑94 (MQ=60)
AGGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCG < SRR4302535.4680204/94‑1 (MQ=60)
GGAACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATAACCGGTTTCAGCCCCATATAGTCCAGCGCTTTTTATTCCGACGCGCGT > SRR4302535.37766/1‑94 (MQ=60)
ACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCA > SRR4302535.3307317/1‑94 (MQ=60)
ACCGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCA > SRR4302535.3160710/1‑94 (MQ=60)
CGATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAAC > SRR4302535.3462302/1‑94 (MQ=60)
ATAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCG < SRR4302535.85455/94‑1 (MQ=60)
TAAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGG < SRR4302535.1032632/94‑1 (MQ=60)
AAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGA > SRR4302535.3791524/1‑94 (MQ=60)
AAACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGA > SRR4302535.1603219/1‑94 (MQ=60)
ACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATCCCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATC < SRR4302535.2569925/94‑1 (MQ=60)
ACACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATC < SRR4302535.219335/94‑1 (MQ=60)
CACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCG > SRR4302535.2261152/1‑94 (MQ=60)
CACTTTGTCGATAGACGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCCTATAGGCCCGCGCTTTTTCTGCCGACGCGCGTTCAACCCGATCG > SRR4302535.304927/1‑94 (MQ=60)
ACTTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGG > SRR4302535.4534944/1‑94 (MQ=60)
TTTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCA > SRR4302535.1041293/1‑94 (MQ=60)
TTGTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAA > SRR4302535.3374499/1‑94 (MQ=60)
GTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAAC < SRR4302535.1516220/94‑1 (MQ=60)
GTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAAC > SRR4302535.2612288/1‑94 (MQ=60)
GTCGATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAAC > SRR4302535.2316715/1‑94 (MQ=60)
TCGATAGCCGCTTCGGTCAGCGGAATACCCGGATTCAGCCCCCTATAGGCCAGCGCTTTTTCTGCAGACGCGCGTTCAAACGGATCGGCAAACG > SRR4302535.1941080/1‑94 (MQ=60)
GATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAA < SRR4302535.2471162/94‑1 (MQ=60)
ATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAG < SRR4302535.1158570/94‑1 (MQ=60)
ATAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAG < SRR4302535.1540801/94‑1 (MQ=60)
TAGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGC > SRR4302535.4359901/1‑94 (MQ=60)
AGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCC > SRR4302535.389338/1‑94 (MQ=60)
AGCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCC < SRR4302535.2047092/94‑1 (MQ=60)
GCCGCTTCGGTCAGCGGAATCCCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGGTCAACCGGATCGGCAAACGAAGCCG < SRR4302535.969297/94‑1 (MQ=60)
GCCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCG > SRR4302535.4308652/1‑94 (MQ=60)
CCGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCGG > SRR4302535.2810672/1‑94 (MQ=60)
CGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCGGA > SRR4302535.3838582/1‑94 (MQ=60)
CGCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCGGA > SRR4302535.4086764/1‑94 (MQ=60)
GCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCGGAT < SRR4302535.393744/94‑1 (MQ=60)
GCTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCGGAT > SRR4302535.1488356/1‑94 (MQ=60)
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CGACTTTTCGCCCTTTGGCGATCTCCGCTGCCGCGCGTAAATCTTCAATGCGCGAGTTGGTACAGGAACCGATAAACACTTTGTCGATAGCCACTTCGGTCAGCGGAATACCCGGTTTCAGCCCCATATAGGCCAGCGCTTTTTCTGCCGACGCGCGTTCAACCGGATCGGCAAACGAAGCCGGAT > NC_000913/79763‑79948
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
