Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
105,471 |
A→G |
Q56R (CAG→CGG) |
ftsZ → |
FtsZ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 105,471 | 0 | A | G | 100.0%
| 658.7
/ NA
| 209 | Q56R (CAG→CGG) | ftsZ | FtsZ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (111/98); total (111/98) |
Only 100 of 218 total aligned reads displayed.
TTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACAGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCG > NC_000913/105381‑105560
|
ttGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGa > 2:1044915/1‑93 (MQ=255)
ttGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGa < 2:2903470/93‑1 (MQ=255)
gAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGgacggacg > 2:1556900/1‑93 (MQ=255)
gAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGatg > 2:2589425/1‑91 (MQ=255)
aaCACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGa > 1:3097719/1‑93 (MQ=255)
acacATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGAt > 1:1252312/1‑93 (MQ=255)
acacATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGAt > 2:2694174/1‑93 (MQ=255)
cacaTGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGAtt > 1:2405295/1‑93 (MQ=255)
cacaTGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGAtt > 2:2076972/1‑93 (MQ=255)
aTGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCaa < 1:3844199/93‑1 (MQ=255)
aTGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCaa > 2:3941102/1‑93 (MQ=255)
aTGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCaa > 1:2166543/1‑93 (MQ=255)
tGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCaaa > 2:4582882/1‑93 (MQ=255)
tGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCaaa > 1:839090/1‑93 (MQ=255)
ggTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAAt < 1:100473/93‑1 (MQ=255)
gTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATc < 1:2498117/93‑1 (MQ=255)
tGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCg > 2:3580815/1‑93 (MQ=255)
gcgAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTa > 1:3185433/1‑93 (MQ=255)
cgAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAg < 2:3505370/93‑1 (MQ=255)
gAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGc < 2:4649872/93‑1 (MQ=255)
gAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGc < 1:2957786/93‑1 (MQ=255)
gcgcATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCgg > 2:2915092/1‑93 (MQ=255)
gcgcATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCgg < 2:3803174/93‑1 (MQ=255)
gcgcATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCgg < 2:899647/93‑1 (MQ=255)
gcgcATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCgg < 1:1804682/93‑1 (MQ=255)
cATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTAt < 1:3255678/93‑1 (MQ=255)
aTTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATc > 1:4367883/1‑93 (MQ=255)
ttGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCa > 1:2036643/1‑93 (MQ=255)
tGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCAc > 2:1606827/1‑93 (MQ=255)
tGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCAc < 2:2135857/93‑1 (MQ=255)
gAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACCAGCGCTGCGTACAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCAcc > 2:2119045/1‑93 (MQ=255)
aaGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCa < 1:518759/93‑1 (MQ=255)
aGGTGTTGAATTCTTCGCGGTAAATACCGAGGACCAAGCGTTGGGTAAAAAACGGGTTGGACGGCCGTTTCAAATCGGAGGCGTAATAACCaa > 2:165722/1‑93 (MQ=255)
gtgtTGAATTCTTCGCGGTAAATACCTATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAg < 1:3825054/93‑1 (MQ=255)
gtgtTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAg > 1:4079931/1‑93 (MQ=255)
gtgtTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAg < 2:184275/93‑1 (MQ=255)
ttttGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAgg < 1:756783/91‑1 (MQ=255)
tgtTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAgg > 1:1221813/1‑93 (MQ=255)
tgtTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAgg > 1:3148553/1‑93 (MQ=255)
gtTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGa > 1:2561494/1‑93 (MQ=255)
tGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACt > 1:1592352/1‑93 (MQ=255)
taaTTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTg < 1:4293310/92‑1 (MQ=255)
aaTTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTgg < 2:1501869/93‑1 (MQ=255)
ttcttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggc < 2:188256/93‑1 (MQ=255)
ttcttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggc > 1:4527867/1‑93 (MQ=255)
atcttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggc < 1:4209417/92‑1 (MQ=255)
tcttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcg > 2:4556300/1‑93 (MQ=255)
cttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgg > 2:1628741/1‑92 (MQ=255)
cttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgc < 2:1316915/93‑1 (MQ=255)
ttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgct < 1:1373263/93‑1 (MQ=255)
ttcGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgct > 1:1026556/1‑93 (MQ=255)
cgcgGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgctgg > 1:221942/1‑93 (MQ=255)
gcgGTAAATACCGATGCACAGGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGGATCACCAAAGGACTGggcgctggg > 2:3832840/1‑92 (MQ=255)
cgGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgctggcg > 1:2566865/1‑93 (MQ=255)
ggTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgctggcgc < 2:3226262/93‑1 (MQ=255)
ggTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGCATCACCAAAGGACTGggcgctggcgc > 2:613713/1‑93 (MQ=255)
gTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGggcgctggcgct > 2:1094146/1‑93 (MQ=255)
tAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTa > 2:2739676/1‑93 (MQ=255)
aaTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAAt > 1:1683556/1‑93 (MQ=255)
aaTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAAt < 2:844905/93‑1 (MQ=255)
aaTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAAt < 1:1833509/93‑1 (MQ=255)
aaTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAAt < 2:4361141/93‑1 (MQ=255)
aTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATc < 2:1171379/93‑1 (MQ=255)
aTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATc < 2:3148341/93‑1 (MQ=255)
aTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATc < 1:3326931/93‑1 (MQ=255)
aTACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATc < 1:1633524/93‑1 (MQ=255)
aaCCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATcc < 1:793327/92‑1 (MQ=255)
aCCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCa < 2:3792074/93‑1 (MQ=255)
aCCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCa < 1:1566304/93‑1 (MQ=255)
gATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGaa > 1:2739508/1‑93 (MQ=255)
aTGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAg > 1:1062911/1‑93 (MQ=255)
tGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGt < 2:3237289/93‑1 (MQ=255)
tGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGt < 1:2278071/93‑1 (MQ=255)
gCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGtt < 2:2205802/93‑1 (MQ=255)
gCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGtt > 1:2247070/1‑93 (MQ=255)
gCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGtt > 2:1289777/1‑93 (MQ=255)
cacaAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTg < 2:3073016/93‑1 (MQ=255)
aaGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGcc > 1:4459073/1‑93 (MQ=255)
aGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCg > 2:2809802/1‑93 (MQ=255)
gcgcTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGc > 2:2642744/1‑93 (MQ=255)
cTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAAt < 2:2017077/93‑1 (MQ=255)
gCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGc > 1:3424945/1‑93 (MQ=255)
tAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGc > 1:3661870/1‑93 (MQ=255)
aaaaCAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCt < 1:562099/93‑1 (MQ=255)
aaCAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCtga < 2:359916/93‑1 (MQ=255)
aCAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCtgat > 2:507858/1‑93 (MQ=255)
aGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCTATGCGGCtgctga > 2:1369376/1‑93 (MQ=255)
aGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCtgatga < 2:410473/93‑1 (MQ=255)
aGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCtgatga < 1:2906804/93‑1 (MQ=255)
gCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAg < 2:3083743/93‑1 (MQ=255)
ggTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGa > 1:3227883/1‑93 (MQ=255)
ggTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGa < 2:2493828/93‑1 (MQ=255)
ggTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGa < 2:1417346/93‑1 (MQ=255)
gTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAt > 1:2809586/1‑93 (MQ=255)
gTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAt < 1:2440020/93‑1 (MQ=255)
gTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAt > 2:2379130/1‑93 (MQ=255)
tGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATcg > 1:2895152/1‑93 (MQ=255)
tGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATcg < 1:2456685/93‑1 (MQ=255)
tGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATcg > 1:3683947/1‑93 (MQ=255)
ggacggacGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATcgc < 2:4375297/93‑1 (MQ=255)
|
TTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACAGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCG > NC_000913/105381‑105560
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGTTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACAGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCGATGC > NC_000913/105378‑105564
|
CTGTTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACG < SRR4302535.3654853/94‑1 (MQ=60)
CTGTTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACG > SRR4302535.1534882/1‑94 (MQ=60)
CTGTTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACG < SRR4302535.3934879/94‑1 (MQ=60)
GAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGA > SRR4302535.3119288/1‑94 (MQ=60)
AACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGAT > SRR4302535.1261267/1‑94 (MQ=60)
AACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGAT > SRR4302535.2893533/1‑94 (MQ=60)
ACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATT > SRR4302535.3483333/1‑94 (MQ=60)
ACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATT > SRR4302535.2422607/1‑94 (MQ=60)
CATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAA > SRR4302535.2182073/1‑94 (MQ=60)
CATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAA > SRR4302535.761774/1‑94 (MQ=60)
CATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAA > SRR4302535.3898830/1‑94 (MQ=60)
ATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAA < SRR4302535.3870675/94‑1 (MQ=60)
ATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAA > SRR4302535.844982/1‑94 (MQ=60)
TGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAAT > SRR4302535.2325286/1‑94 (MQ=60)
GGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATC < SRR4302535.101180/94‑1 (MQ=60)
GTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCG < SRR4302535.2516140/94‑1 (MQ=60)
CGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTA < SRR4302535.1272596/94‑1 (MQ=60)
CGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTA > SRR4302535.3207457/1‑94 (MQ=60)
CGCGAGCGCATTGAAGGTATTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTA < SRR4302535.1030534/94‑1 (MQ=60)
GAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCG < SRR4302535.4676934/94‑1 (MQ=60)
GAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCG < SRR4302535.2978558/94‑1 (MQ=60)
GCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGT < SRR4302535.1817725/94‑1 (MQ=60)
CGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTA > SRR4302535.3262781/1‑94 (MQ=60)
CGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTA > SRR4302535.2677002/1‑94 (MQ=60)
CATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATC > SRR4302535.4397772/1‑94 (MQ=60)
CATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATC < SRR4302535.3278296/94‑1 (MQ=60)
CATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATC < SRR4302535.331406/94‑1 (MQ=60)
ATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCA > SRR4302535.1842132/1‑94 (MQ=60)
ATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCA > SRR4302535.2051310/1‑94 (MQ=60)
GAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAACCAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCA > SRR4302535.779288/1‑94 (MQ=60)
AAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAA < SRR4302535.522391/94‑1 (MQ=60)
AGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAA > SRR4302535.1923921/1‑94 (MQ=60)
GGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAG > SRR4302535.4107839/1‑94 (MQ=60)
GTGTTGAATTCTTCGCGGTAAATACCTATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGG < SRR4302535.3851438/94‑1 (MQ=60)
GTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGG < SRR4302535.1533855/94‑1 (MQ=60)
GTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGG > SRR4302535.1230565/1‑94 (MQ=60)
GTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGG > SRR4302535.3170443/1‑94 (MQ=60)
TTTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGA < SRR4302535.762110/94‑1 (MQ=60)
TGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGA < SRR4302535.2071142/94‑1 (MQ=60)
TGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGA < SRR4302535.3130003/94‑1 (MQ=60)
TGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGA > SRR4302535.2579936/1‑94 (MQ=60)
TTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACT > SRR4302535.1603842/1‑94 (MQ=60)
TTGAATGCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACT < SRR4302535.2289316/94‑1 (MQ=60)
TGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTG < SRR4302535.856787/94‑1 (MQ=60)
TGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTG > SRR4302535.103918/1‑94 (MQ=60)
TAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGG < SRR4302535.4322687/94‑1 (MQ=60)
GAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGG < SRR4302535.3703896/94‑1 (MQ=60)
GAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGG > SRR4302535.1703278/1‑94 (MQ=60)
GAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGG < SRR4302535.4517624/94‑1 (MQ=60)
GAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGG > SRR4302535.2004387/1‑94 (MQ=60)
AATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGG < SRR4302535.2584145/94‑1 (MQ=60)
AATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGG < SRR4302535.1621713/94‑1 (MQ=60)
ATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGC > SRR4302535.4558877/1‑94 (MQ=60)
ATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGC < SRR4302535.843825/94‑1 (MQ=60)
ATCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCG < SRR4302535.4238226/94‑1 (MQ=60)
CTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCT > SRR4302535.1033847/1‑94 (MQ=60)
TTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTG < SRR4302535.1383077/94‑1 (MQ=60)
TTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTG < SRR4302535.1253308/94‑1 (MQ=60)
TCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGG > SRR4302535.223469/1‑94 (MQ=60)
GCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCG > SRR4302535.2585331/1‑94 (MQ=60)
GGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCT > SRR4302535.2517296/1‑94 (MQ=60)
GGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCA > SRR4302535.2960940/1‑94 (MQ=60)
AAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAAT > SRR4302535.3038977/1‑94 (MQ=60)
AAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAAT < SRR4302535.2461883/94‑1 (MQ=60)
AAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAAT > SRR4302535.1695750/1‑94 (MQ=60)
AATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATC > SRR4302535.4051376/1‑94 (MQ=60)
AATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATC < SRR4302535.1846738/94‑1 (MQ=60)
ATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCC < SRR4302535.3350083/94‑1 (MQ=60)
ATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCC < SRR4302535.1645329/94‑1 (MQ=60)
AACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCA < SRR4302535.798900/94‑1 (MQ=60)
ACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAG < SRR4302535.1577609/94‑1 (MQ=60)
ACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAG < SRR4302535.2400095/94‑1 (MQ=60)
CGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAA > SRR4302535.2759039/1‑94 (MQ=60)
CGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAA < SRR4302535.1684736/94‑1 (MQ=60)
CGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGAATGGGCGCTGGCGCTAATCCAGAA > SRR4302535.2917730/1‑94 (MQ=60)
GATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAG < SRR4302535.2425266/94‑1 (MQ=60)
GATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAG > SRR4302535.31876/1‑94 (MQ=60)
GATGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAG > SRR4302535.1070476/1‑94 (MQ=60)
TGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTT < SRR4302535.2294343/94‑1 (MQ=60)
TGCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTT > SRR4302535.2263062/1‑94 (MQ=60)
GCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTG < SRR4302535.4414797/94‑1 (MQ=60)
GCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTG < SRR4302535.1547676/94‑1 (MQ=60)
GCACAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTG < SRR4302535.4322559/94‑1 (MQ=60)
CAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCC > SRR4302535.4489654/1‑94 (MQ=60)
CAAGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCC < SRR4302535.3222711/94‑1 (MQ=60)
AGCGCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGC < SRR4302535.4659443/94‑1 (MQ=60)
GCTGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGTTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAAT < SRR4302535.2262160/94‑1 (MQ=60)
TGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGC > SRR4302535.2214664/1‑94 (MQ=60)
TGCGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGC > SRR4302535.3448761/1‑94 (MQ=60)
CGTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGG > SRR4302535.3091326/1‑94 (MQ=60)
GTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGC > SRR4302535.1578868/1‑94 (MQ=60)
GTAAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGC > SRR4302535.3687222/1‑94 (MQ=60)
AAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTG < SRR4302535.566029/94‑1 (MQ=60)
AAAACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTG > SRR4302535.248198/1‑94 (MQ=60)
AACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGTAATGCGGGTGAT > SRR4302535.338780/1‑94 (MQ=60)
AACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGAT < SRR4302535.2766988/94‑1 (MQ=60)
AACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGAT < SRR4302535.3399392/94‑1 (MQ=60)
ACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATG < SRR4302535.2686570/94‑1 (MQ=60)
ACAGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATG > SRR4302535.3832348/1‑94 (MQ=60)
AGCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAG < SRR4302535.2927348/94‑1 (MQ=60)
GCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGG > SRR4302535.957082/1‑94 (MQ=60)
GCGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGG < SRR4302535.38656/94‑1 (MQ=60)
CGGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGA > SRR4302535.3250253/1‑94 (MQ=60)
GGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAT < SRR4302535.4373031/94‑1 (MQ=60)
GGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAT < SRR4302535.4135089/94‑1 (MQ=60)
GGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAT > SRR4302535.2829561/1‑94 (MQ=60)
GGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAT > SRR4302535.107121/1‑94 (MQ=60)
GGTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGAA < SRR4302535.553456/94‑1 (MQ=60)
GTTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATC < SRR4302535.2457597/94‑1 (MQ=60)
TTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCG > SRR4302535.2915630/1‑94 (MQ=60)
TTGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCG > SRR4302535.3709437/1‑94 (MQ=60)
TGGACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGC < SRR4302535.2474401/94‑1 (MQ=60)
ACGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGGTGAGGATCGGGAT > SRR4302535.4190780/1‑94 (MQ=60)
CGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCGATG > SRR4302535.2418266/1‑94 (MQ=60)
CGGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCGATG > SRR4302535.547456/1‑94 (MQ=60)
GGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCGATGC > SRR4302535.1441816/1‑94 (MQ=60)
|
CTGTTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACAGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCGATGC > NC_000913/105378‑105564
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
