Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,081,054 |
A→G |
T93A (ACC→GCC) |
sbcB → |
exonuclease I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,081,054 | 0 | A | G | 100.0%
| 515.4
/ NA
| 164 | T93A (ACC→GCC) | sbcB | exonuclease I |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (74/90); total (74/90) |
Only 100 of 182 total aligned reads displayed.
CCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTACCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGA > NC_000913/2080965‑2081142
|
ccGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTtgccg > 2:335457/1‑93 (MQ=255)
cGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTtgccgt > 1:4392209/1‑93 (MQ=255)
gTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTtgccgta < 2:2379607/93‑1 (MQ=255)
gTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTtgccgta < 2:3243976/93‑1 (MQ=255)
tATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTtgccgtac < 2:3159798/93‑1 (MQ=255)
tATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTtgccgtac > 1:2895325/1‑93 (MQ=255)
taattaCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTtgccgtaccca > 2:2373370/1‑91 (MQ=255)
aattaCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGaa < 1:177592/93‑1 (MQ=255)
aattaCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGaa > 1:821861/1‑93 (MQ=255)
attaCCTGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAg < 2:2279293/93‑1 (MQ=255)
ttaCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGa < 1:3745005/93‑1 (MQ=255)
ttaCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGa > 1:701823/1‑93 (MQ=255)
ttaCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGa < 2:1733484/93‑1 (MQ=255)
ttaCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGa < 1:3014527/93‑1 (MQ=255)
aCCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGAcc < 2:1796236/93‑1 (MQ=255)
cGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGACGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTg < 1:3688613/93‑1 (MQ=255)
ggTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGt > 1:2461180/1‑93 (MQ=255)
gTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTa < 1:1413633/93‑1 (MQ=255)
gTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTa < 1:4458764/93‑1 (MQ=255)
gTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTa < 1:185158/93‑1 (MQ=255)
gTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTa < 1:182720/93‑1 (MQ=255)
gTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTa > 1:4236910/1‑93 (MQ=255)
tATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTAt > 2:2236322/1‑93 (MQ=255)
aTTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTAtt > 1:362322/1‑93 (MQ=255)
aTTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTAtt > 2:2123251/1‑93 (MQ=255)
ttcacccGCCGGAAGCACGCGCGAAAGGAGAAAACGAACCCGCGTTTGCCGCCCGTATTCACTCGCGTGTTGCCGTACCGAAGACCTGTAGTc < 2:3571973/89‑1 (MQ=255)
ttACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTc < 1:2066427/93‑1 (MQ=255)
ttACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTc > 1:4149063/1‑93 (MQ=255)
aCCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTg > 1:2144117/1‑93 (MQ=255)
aCCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTg > 1:2066499/1‑93 (MQ=255)
ccGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGc < 1:2929432/93‑1 (MQ=255)
gCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTa > 1:1622731/1‑93 (MQ=255)
cAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTac < 1:1507216/93‑1 (MQ=255)
cAGGAAACACGGGCGAAAGAAGAAACCTAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTac < 2:4031395/93‑1 (MQ=255)
aGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTaca > 1:2883502/1‑93 (MQ=255)
aGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTaca > 2:4413803/1‑93 (MQ=255)
ggAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTacaa > 2:2750702/1‑93 (MQ=255)
gAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTacaac > 2:3482111/1‑93 (MQ=255)
gAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTacaaa > 2:3212234/1‑92 (MQ=255)
aGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTAcaacaa > 1:514906/1‑93 (MQ=255)
gCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAAt > 2:1915799/1‑93 (MQ=255)
aCGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAAtgt > 2:3591749/1‑93 (MQ=255)
aCGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAAtgt < 2:2546091/93‑1 (MQ=255)
cGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAAtgtg < 2:3046141/93‑1 (MQ=255)
gggCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGc > 1:2488423/1‑93 (MQ=255)
gCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGt < 1:1751688/93‑1 (MQ=255)
gCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGt > 2:2152365/1‑93 (MQ=255)
cGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGtt > 1:3501875/1‑93 (MQ=255)
aaaGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTc < 2:1907049/93‑1 (MQ=255)
aaaGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTc < 1:3386910/93‑1 (MQ=255)
aaaGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTc > 2:1259394/1‑93 (MQ=255)
aaaGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGACTACAACAATGTGCGTTTc < 2:4576063/93‑1 (MQ=255)
aaGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcg > 1:1554772/1‑93 (MQ=255)
agtagaAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcga < 2:1523446/90‑1 (MQ=255)
aGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCCTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcga > 1:2683695/1‑93 (MQ=255)
ggtgaAAGCGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTATTGCCGTACCGAAGCCCTGTATTCTGGGCTACAACAATGTGCGTTTcgac < 2:1782551/90‑1 (MQ=255)
ggAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcgac > 2:2723985/1‑93 (MQ=255)
ggAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcgac < 2:1390328/93‑1 (MQ=255)
ggAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcgac > 1:723272/1‑93 (MQ=255)
gagaAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcgacg > 1:886212/1‑93 (MQ=255)
agaAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCCAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcgacga < 1:31158/93‑1 (MQ=255)
gaAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTcgacgac < 2:1109320/93‑1 (MQ=255)
aaaaCGGAGCCGCGTTTGCCGCCCGTATTCACTCGCGTTTTGCCGCACCGTTAACCTGTCTTCTTGGCTACAACCCTGTGCGTTTcgacgacc > 2:4116505/1‑92 (MQ=255)
aaaaCGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGGTCGTTTcgacgacg > 2:1042192/1‑93 (MQ=255)
aaCGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGaa < 1:130177/93‑1 (MQ=255)
aaCGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGaa < 1:3067737/93‑1 (MQ=255)
aaCGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTAGGCTACAACAATGTGCGTTTCGACGACGaa > 1:59119/1‑93 (MQ=255)
aCGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAg > 1:3606548/1‑93 (MQ=255)
aaGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTca < 1:2285396/93‑1 (MQ=255)
aaGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTca < 1:4332463/93‑1 (MQ=255)
aaGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTca < 1:3227333/93‑1 (MQ=255)
aGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTcac > 2:2101252/1‑93 (MQ=255)
aGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTcac < 1:2415527/93‑1 (MQ=255)
gCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTcaca > 2:3649685/1‑93 (MQ=255)
ccGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCacac < 1:118901/93‑1 (MQ=255)
ccGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCCAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCacac < 1:31461/93‑1 (MQ=255)
cgcgTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACg < 2:4400483/93‑1 (MQ=255)
gTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCaa > 1:216932/1‑93 (MQ=255)
tttGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAAc < 1:1064892/93‑1 (MQ=255)
tttGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAAc < 1:1417775/93‑1 (MQ=255)
gccgccCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACAtt < 2:2816971/93‑1 (MQ=255)
gccgccCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACAtt > 1:1991223/1‑93 (MQ=255)
gccCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACAttttt < 2:539192/93‑1 (MQ=255)
cccGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACAtttttt < 2:3785774/93‑1 (MQ=255)
ccGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTa > 2:1605030/1‑93 (MQ=255)
cGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTAt > 1:3225610/1‑93 (MQ=255)
gTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATc < 2:3844248/93‑1 (MQ=255)
tATTCACTCGCTTTTTGCCGTCGCGAAGACCTGTAATGTGCGCGACAACAGTGTGCGTGTCGTCGACGAAGTCCGCCGCATCATTTTTTATca < 2:789430/93‑2 (MQ=255)
aTTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGt > 2:2911358/1‑93 (MQ=255)
ttCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTa > 2:119222/1‑93 (MQ=255)
tCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTaa < 2:844450/93‑1 (MQ=255)
cACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAAt > 1:3353833/1‑93 (MQ=255)
aCTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAAtt < 1:1238887/93‑1 (MQ=255)
aCTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAAtt > 2:2282959/1‑93 (MQ=255)
cTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAAttt < 1:2725924/93‑1 (MQ=255)
cTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAAttt > 1:4006842/1‑93 (MQ=255)
cTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAAttt > 1:4293646/1‑93 (MQ=255)
cGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCt < 1:4613918/93‑1 (MQ=255)
gCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTa < 1:1517856/93‑1 (MQ=255)
cTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTAc > 1:1056815/1‑93 (MQ=255)
|
CCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTACCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGA > NC_000913/2080965‑2081142
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGAGCCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTACCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGATCCTT > NC_000913/2080961‑2081147
|
GGAGCCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTG > SRR4302535.3800117/1‑94 (MQ=60)
AGCCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCC < SRR4302535.817229/94‑1 (MQ=60)
AGCCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCC < SRR4302535.2818675/94‑1 (MQ=60)
CCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGT > SRR4302535.4422261/1‑94 (MQ=60)
CGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTA > SRR4302535.4039236/1‑94 (MQ=60)
GTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTAC > SRR4302535.2915804/1‑94 (MQ=60)
GTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTAC > SRR4302535.38267/1‑94 (MQ=60)
GTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTAC > SRR4302535.1519385/1‑94 (MQ=60)
TAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAA > SRR4302535.827623/1‑94 (MQ=60)
AATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAG < SRR4302535.178827/94‑1 (MQ=60)
ATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGA > SRR4302535.2906023/1‑94 (MQ=60)
ATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGA > SRR4302535.706744/1‑94 (MQ=60)
TTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGAC < SRR4302535.3035655/94‑1 (MQ=60)
TTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGAC < SRR4302535.3770915/94‑1 (MQ=60)
TACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACC < SRR4302535.2104858/94‑1 (MQ=60)
CGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGT > SRR4302535.2478923/1‑94 (MQ=60)
CGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGACGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGT < SRR4302535.3714140/94‑1 (MQ=60)
GGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTA > SRR4302535.4265906/1‑94 (MQ=60)
GTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTAT < SRR4302535.1423724/94‑1 (MQ=60)
GTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTAT < SRR4302535.183980/94‑1 (MQ=60)
GTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTAT < SRR4302535.186435/94‑1 (MQ=60)
GTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTAT < SRR4302535.4489344/94‑1 (MQ=60)
TATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATT > SRR4302535.364822/1‑94 (MQ=60)
ATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTC > SRR4302535.4177471/1‑94 (MQ=60)
ATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTC > SRR4302535.1184831/1‑94 (MQ=60)
TTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCT < SRR4302535.2081326/94‑1 (MQ=60)
TACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGCCCTGTATTCTG < SRR4302535.1829194/94‑1 (MQ=60)
TACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTG > SRR4302535.2081398/1‑94 (MQ=60)
TACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTG > SRR4302535.2159541/1‑94 (MQ=60)
ACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGG > SRR4302535.1551665/1‑94 (MQ=60)
CCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGG < SRR4302535.3157763/94‑1 (MQ=60)
CCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCT < SRR4302535.2950071/94‑1 (MQ=60)
CGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTA > SRR4302535.1634444/1‑94 (MQ=60)
CAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACA < SRR4302535.1518052/94‑1 (MQ=60)
CAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACA > SRR4302535.2903908/1‑94 (MQ=60)
AAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAA > SRR4302535.518506/1‑94 (MQ=60)
CACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGT > SRR4302535.1846956/1‑94 (MQ=60)
ACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTG < SRR4302535.2178847/94‑1 (MQ=60)
CGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGC > SRR4302535.2506369/1‑94 (MQ=60)
GGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTGTTCTGGGCTACAACAATGTGCG < SRR4302535.1499768/94‑1 (MQ=60)
GGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGT < SRR4302535.173961/94‑1 (MQ=60)
GCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTT > SRR4302535.3526219/1‑94 (MQ=60)
GCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTT < SRR4302535.1764350/94‑1 (MQ=60)
CGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTT > SRR4302535.3404837/1‑94 (MQ=60)
CGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTT > SRR4302535.282995/1‑94 (MQ=60)
CGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTT < SRR4302535.4226800/94‑1 (MQ=60)
AAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCG > SRR4302535.3131199/1‑94 (MQ=60)
AAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCG < SRR4302535.3410477/94‑1 (MQ=60)
AAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCG > SRR4302535.1565977/1‑94 (MQ=60)
AAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCCTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGA > SRR4302535.2702886/1‑94 (MQ=60)
AGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGAC > SRR4302535.2978973/1‑94 (MQ=60)
AGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGAC < SRR4302535.4439370/94‑1 (MQ=60)
AGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGAC > SRR4302535.728349/1‑94 (MQ=60)
GGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACG > SRR4302535.892484/1‑94 (MQ=60)
AGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGAC < SRR4302535.458144/94‑1 (MQ=60)
AGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCCAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGAC < SRR4302535.31398/94‑1 (MQ=60)
AAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTAGGCTACAACAATGTGCGTTTCGACGACGAA > SRR4302535.59553/1‑94 (MQ=60)
AACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAG > SRR4302535.3631568/1‑94 (MQ=60)
AACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAG < SRR4302535.3089169/94‑1 (MQ=60)
AACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAG < SRR4302535.131092/94‑1 (MQ=60)
AACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAG < SRR4302535.3332664/94‑1 (MQ=60)
AAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCAC < SRR4302535.2301723/94‑1 (MQ=60)
AAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCAC < SRR4302535.4362091/94‑1 (MQ=60)
AAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCAC < SRR4302535.3249701/94‑1 (MQ=60)
AGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACA < SRR4302535.2432917/94‑1 (MQ=60)
GCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACAC < SRR4302535.2521409/94‑1 (MQ=60)
CCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACG < SRR4302535.119733/94‑1 (MQ=60)
CCGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCCAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACG < SRR4302535.31702/94‑1 (MQ=60)
CGCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGC > SRR4302535.201511/1‑94 (MQ=60)
GCGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCA < SRR4302535.487321/94‑1 (MQ=60)
CGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAA > SRR4302535.218427/1‑94 (MQ=60)
CGTTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACAGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAA > SRR4302535.1568267/1‑94 (MQ=60)
TTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACA < SRR4302535.1427899/94‑1 (MQ=60)
TTTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACA < SRR4302535.1072469/94‑1 (MQ=60)
TTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGGCCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACAT < SRR4302535.3037147/94‑1 (MQ=60)
TTGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACAT < SRR4302535.3454453/94‑1 (MQ=60)
TGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATT > SRR4302535.2005560/1‑94 (MQ=60)
TGCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATT < SRR4302535.864496/94‑1 (MQ=60)
GCCGCCCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTT < SRR4302535.3536386/94‑1 (MQ=60)
CCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTAT > SRR4302535.2441097/1‑94 (MQ=60)
CCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTAT > SRR4302535.1245882/1‑94 (MQ=60)
CCGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTAT > SRR4302535.3247972/1‑94 (MQ=60)
CGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATC > SRR4302535.2220737/1‑94 (MQ=60)
CGTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATC > SRR4302535.372297/1‑94 (MQ=60)
GTATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCG < SRR4302535.1993372/94‑1 (MQ=60)
TATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGT < SRR4302535.241942/94‑1 (MQ=60)
ATTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTA > SRR4302535.673653/1‑94 (MQ=60)
TTCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAA < SRR4302535.1326586/94‑1 (MQ=60)
TCACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAAT > SRR4302535.3377188/1‑94 (MQ=60)
CACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATT < SRR4302535.72843/94‑1 (MQ=60)
ACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTT > SRR4302535.4323025/1‑94 (MQ=60)
ACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTT < SRR4302535.1247732/94‑1 (MQ=60)
ACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTT < SRR4302535.4384044/94‑1 (MQ=60)
ACTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTT > SRR4302535.4034257/1‑94 (MQ=60)
CTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTC < SRR4302535.2745397/94‑1 (MQ=60)
CTCGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTC > SRR4302535.1297574/1‑94 (MQ=60)
CGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTA < SRR4302535.4645265/94‑1 (MQ=60)
CGCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTA < SRR4302535.3657229/94‑1 (MQ=60)
GCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTAC < SRR4302535.1528790/94‑1 (MQ=60)
GCTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTAC > SRR4302535.1064327/1‑94 (MQ=60)
CTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACG < SRR4302535.4354976/94‑1 (MQ=60)
CTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACG > SRR4302535.3183487/1‑94 (MQ=60)
CTTTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACG > SRR4302535.2728336/1‑94 (MQ=60)
TTTTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGAT < SRR4302535.744244/94‑1 (MQ=60)
TTGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGATCC < SRR4302535.1568005/94‑1 (MQ=60)
TGCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGATCCT > SRR4302535.2878176/1‑94 (MQ=60)
GCCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGATCCTT > SRR4302535.1024532/1‑94 (MQ=60)
|
GGAGCCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTACCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGATCCTT > NC_000913/2080961‑2081147
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
