Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,169,986 |
G→A |
R304W (CGG→TGG) |
gatD ← |
galactitol‑1‑phosphate dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,169,986 | 0 | G | A | 99.3%
| 540.0
/ NA
| 151 | R304W (CGG→TGG) | gatD | galactitol‑1‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (83/67); minor base T (1/0); total (84/67) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 158 total aligned reads displayed.
GATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCGGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTGC > NC_000913/2169897‑2170075
|
gATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCt < 2:634963/93‑1 (MQ=255)
aTGTCATGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTc > 1:2349601/1‑93 (MQ=255)
aTGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTc > 1:3862474/1‑93 (MQ=255)
aTGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTc > 2:2638818/1‑93 (MQ=255)
gTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGc > 1:318181/1‑93 (MQ=255)
aCGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGt > 2:1107592/1‑93 (MQ=255)
aCGCAACGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAAATTACGTTCTGTCAGCAACCAGCTCGCCGt > 2:329138/1‑93 (MQ=255)
cACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTc > 2:2457967/1‑93 (MQ=255)
ccGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTccc > 1:1340963/1‑93 (MQ=255)
ccGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGATTccc > 1:354864/1‑93 (MQ=255)
cGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCa < 2:465370/93‑1 (MQ=255)
cGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCa < 1:2193684/93‑1 (MQ=255)
cGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCa < 1:60244/93‑1 (MQ=255)
cTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTc > 1:3093836/1‑93 (MQ=255)
cTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTc < 1:2928213/93‑1 (MQ=255)
tGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTcc > 2:2677097/1‑93 (MQ=255)
tGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTcc > 2:2473288/1‑93 (MQ=255)
tGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTCACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTcc < 1:4418683/93‑1 (MQ=255)
gggCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGCCTCCAGGCTTAACCTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCt < 1:585179/93‑1 (MQ=255)
cGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGcc < 2:1408795/93‑1 (MQ=255)
gAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCCACCAGCTCGCCGGTTCCCACTCCTGccc > 2:2822316/1‑93 (MQ=255)
gAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGccc > 2:4184175/1‑93 (MQ=255)
gAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGccc < 1:2428070/93‑1 (MQ=255)
gAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGccc > 2:1015958/1‑93 (MQ=255)
gAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGccc < 1:2452197/93‑1 (MQ=255)
aGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCg > 2:3789247/1‑93 (MQ=255)
gCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCgg < 2:4325559/93‑1 (MQ=255)
gCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCgg > 2:3206381/1‑93 (MQ=255)
gCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCgc > 1:928276/1‑92 (MQ=255)
cTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGACCCTGc > 2:693090/1‑93 (MQ=255)
tttCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGcc < 2:1617732/93‑1 (MQ=255)
cAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAg < 2:2049957/93‑1 (MQ=255)
cAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAg < 2:4117849/93‑1 (MQ=255)
cAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAg < 1:3568170/93‑1 (MQ=255)
aaaGCTTCCACGGTGAGCGATTAATGGATCCCGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTGCCACTCCTGCCCCGGCCAAgg > 2:2410854/1‑93 (MQ=255)
aaGCTTCCACGGTGAGCGGTTAATGGCTCCAGGCTTACCTTACGTTCTGTCAGCCACCAGCTCGGCGTTTCCCACTCCTGCCCCGGCCAAggg > 1:1345738/1‑93 (MQ=255)
aGCTTCCGCGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGc < 2:863838/93‑1 (MQ=255)
aGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGc > 2:1781851/1‑93 (MQ=255)
aGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGc > 2:136059/1‑93 (MQ=255)
aGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGACGGTTCCCACTCCTGCCCCGGCCAAGGGc > 2:522298/1‑93 (MQ=255)
gCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCCCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCt > 2:1916/1‑93 (MQ=255)
cTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTg > 1:2075709/1‑93 (MQ=255)
tCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGa < 1:3598279/93‑1 (MQ=255)
tCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGa > 1:4196420/1‑93 (MQ=255)
ccACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGag < 2:2758314/93‑1 (MQ=255)
cACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGagt > 2:4095000/1‑93 (MQ=255)
aCGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTGAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGagta > 1:2510805/1‑93 (MQ=255)
cGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGagtag < 2:1291595/93‑1 (MQ=255)
ggTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGagtagt < 1:3749537/93‑1 (MQ=255)
ggTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGagtagt < 2:3193655/93‑1 (MQ=255)
ggTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGagtagt < 2:437874/93‑1 (MQ=255)
ggTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGagtagt < 1:3837342/93‑1 (MQ=255)
gAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGttaa > 2:2782650/1‑91 (MQ=255)
gAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCa < 1:1422200/93‑1 (MQ=255)
gAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCa > 2:1936210/1‑93 (MQ=255)
gCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATc < 1:652748/93‑1 (MQ=255)
gATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCa > 2:3744795/1‑93 (MQ=255)
aTTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCaa > 1:218031/1‑93 (MQ=255)
ttAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAAc > 2:3722233/1‑93 (MQ=255)
ttAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAAc > 1:3087466/1‑93 (MQ=255)
ttAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAAc > 2:773562/1‑93 (MQ=255)
ttAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAAc < 1:4258569/93‑1 (MQ=255)
ttAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATACAAc > 1:139300/1‑93 (MQ=255)
tAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACt > 1:559918/1‑93 (MQ=255)
aTGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGc < 2:3991477/93‑1 (MQ=255)
tGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGcc > 1:2100324/1‑93 (MQ=255)
gCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGa > 2:1539022/1‑93 (MQ=255)
gCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGa < 1:3735702/93‑1 (MQ=255)
cTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGAt > 2:2665514/1‑93 (MQ=255)
cTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGAt < 1:2967493/93‑1 (MQ=255)
cAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAAc < 1:1115135/93‑1 (MQ=255)
aGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAAcc < 1:1869472/93‑1 (MQ=255)
aGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAAcc > 1:1756809/1‑93 (MQ=255)
ggCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGCTAACCg > 1:3589978/1‑93 (MQ=255)
ggCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCg > 1:2174412/1‑93 (MQ=255)
gCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGt > 1:37606/1‑93 (MQ=255)
gCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGt > 1:2792473/1‑93 (MQ=255)
cTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTc > 2:3092218/1‑93 (MQ=255)
cTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTc < 1:2620545/93‑1 (MQ=255)
ttAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCa < 1:2835484/93‑1 (MQ=255)
ttAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCa < 2:3006934/93‑1 (MQ=255)
aaCTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGc > 2:4332558/1‑93 (MQ=255)
ttACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGctct < 1:3174442/93‑1 (MQ=255)
ttACGTTCTGCCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGctct > 2:3411265/1‑93 (MQ=255)
aCGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCttt < 1:526246/93‑1 (MQ=255)
aCGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCttt < 2:4355081/93‑1 (MQ=255)
cGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTa < 1:2951224/93‑1 (MQ=255)
gTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTAc < 1:1977638/93‑1 (MQ=255)
ttCTGTCAGCAACCTGGTCGCCGTTTCCCACTGCTGCCTCGGCCAAGGGCTGGAGTAGTTCATGCAACTGCCGATGATCGTCAGCTCGTTagc > 2:2309493/1‑91 (MQ=255)
ttCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACg < 1:791556/93‑1 (MQ=255)
ttCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACg > 1:2355089/1‑93 (MQ=255)
ttCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACg > 1:1493927/1‑93 (MQ=255)
ttCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGCAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACg > 1:1907444/1‑93 (MQ=255)
tGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCaa > 2:1516390/1‑93 (MQ=255)
ttCAGCACCCAGCTCGCCGTTTCCCCCTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAat < 2:4270799/92‑1 (MQ=255)
gTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAat < 1:2653855/93‑1 (MQ=255)
aGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATAtt < 2:45650/93‑1 (MQ=255)
aGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATAtt > 1:1312833/1‑93 (MQ=255)
aCCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTGc < 2:454523/93‑1 (MQ=255)
aCCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTGc > 1:3349101/1‑93 (MQ=255)
|
GATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCGGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTGC > NC_000913/2169897‑2170075
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCGGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTGC > NC_000913/2169897‑2170075
|
GATGTCATGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTC > SRR4302535.2366448/1‑94 (MQ=60)
GATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTC > SRR4302535.981456/1‑94 (MQ=60)
GATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTC > SRR4302535.3889048/1‑94 (MQ=60)
TGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGC > SRR4302535.320386/1‑94 (MQ=60)
ACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCC > SRR4302535.1350528/1‑94 (MQ=60)
ACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGATTCCC > SRR4302535.357312/1‑94 (MQ=60)
CGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCAC < SRR4302535.2209315/94‑1 (MQ=60)
CGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCAC < SRR4302535.60690/94‑1 (MQ=60)
CCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTC > SRR4302535.3115382/1‑94 (MQ=60)
CTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCC < SRR4302535.2948848/94‑1 (MQ=60)
TGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCT < SRR4302535.245152/94‑1 (MQ=60)
TGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTCACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCT < SRR4302535.4448938/94‑1 (MQ=60)
GGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGCCTCCAGGCTTAACCTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTG < SRR4302535.589281/94‑1 (MQ=60)
GAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCC < SRR4302535.2469871/94‑1 (MQ=60)
GAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCC < SRR4302535.2445566/94‑1 (MQ=60)
AGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGC > SRR4302535.934848/1‑94 (MQ=60)
GCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGC > SRR4302535.1496850/1‑94 (MQ=60)
CAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGG < SRR4302535.3592912/94‑1 (MQ=60)
AAAGCTTCCACGGTGAGCGGTTAATGGCTCCAGGCTTACCTTACGTTCTGTCAGCCACCAGCTCGGCGTTTCCCACTCCTGCCCCGGCCAAGGG > SRR4302535.1355346/1‑94 (MQ=60)
AAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGG < SRR4302535.2536353/94‑1 (MQ=60)
GCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTG > SRR4302535.2090661/1‑94 (MQ=60)
CTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGG > SRR4302535.1331664/1‑94 (MQ=60)
TTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGA > SRR4302535.4225137/1‑94 (MQ=60)
TCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAG < SRR4302535.3623251/94‑1 (MQ=60)
TCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAG < SRR4302535.2398654/94‑1 (MQ=60)
CACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTGAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTA > SRR4302535.2528904/1‑94 (MQ=60)
ACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAG < SRR4302535.4064372/94‑1 (MQ=60)
GGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTT < SRR4302535.3775476/94‑1 (MQ=60)
GGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTT < SRR4302535.3863796/94‑1 (MQ=60)
TGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCA > SRR4302535.3607153/1‑94 (MQ=60)
GAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCAT < SRR4302535.1432355/94‑1 (MQ=60)
AGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATC > SRR4302535.23040/1‑94 (MQ=60)
GCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCC < SRR4302535.657300/94‑1 (MQ=60)
GATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAA > SRR4302535.219531/1‑94 (MQ=60)
ATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAATGGCTGGAGTAGTTCATCCAAC > SRR4302535.4304665/1‑94 (MQ=60)
ATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAAC > SRR4302535.3108969/1‑94 (MQ=60)
ATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATACAAC > SRR4302535.140276/1‑94 (MQ=60)
TTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACT < SRR4302535.4287739/94‑1 (MQ=60)
TTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACT > SRR4302535.563834/1‑94 (MQ=60)
ATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCC > SRR4302535.1919804/1‑94 (MQ=60)
ATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCC > SRR4302535.2115471/1‑94 (MQ=60)
GCTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGAT < SRR4302535.3761557/94‑1 (MQ=60)
CTCCAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATA < SRR4302535.2988316/94‑1 (MQ=60)
CAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACC < SRR4302535.1123083/94‑1 (MQ=60)
CAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACC < SRR4302535.1362581/94‑1 (MQ=60)
CAGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACC > SRR4302535.1769510/1‑94 (MQ=60)
AGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGCTAACCG > SRR4302535.3614879/1‑94 (MQ=60)
AGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCG < SRR4302535.3283846/94‑1 (MQ=60)
AGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCG > SRR4302535.2189962/1‑94 (MQ=60)
AGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCG < SRR4302535.1882950/94‑1 (MQ=60)
AGGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCG > SRR4302535.657704/1‑94 (MQ=60)
GGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGT > SRR4302535.37895/1‑94 (MQ=60)
GGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGT > SRR4302535.2164478/1‑94 (MQ=60)
GGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGT > SRR4302535.2812344/1‑94 (MQ=60)
GGCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGT < SRR4302535.2893228/94‑1 (MQ=60)
GCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTC > SRR4302535.2194029/1‑94 (MQ=60)
GCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTC < SRR4302535.2772401/94‑1 (MQ=60)
GCTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTC < SRR4302535.2962283/94‑1 (MQ=60)
CTTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCA < SRR4302535.2639332/94‑1 (MQ=60)
TTAACTTACGTTCTGTCAGCAACCAGCTCGCCTTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAG < SRR4302535.3664254/94‑1 (MQ=60)
TTAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAG < SRR4302535.2855605/94‑1 (MQ=60)
TAACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGC < SRR4302535.4587029/94‑1 (MQ=60)
ACTTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTC > SRR4302535.3001415/1‑94 (MQ=60)
TTACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTT < SRR4302535.3196411/94‑1 (MQ=60)
TACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTT > SRR4302535.3506308/1‑94 (MQ=60)
ACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTA > SRR4302535.3841136/1‑94 (MQ=60)
ACGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTA < SRR4302535.529921/94‑1 (MQ=60)
CGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTAC < SRR4302535.2971956/94‑1 (MQ=60)
CGTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTAC > SRR4302535.2042756/1‑94 (MQ=60)
GTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACG > SRR4302535.3175647/1‑94 (MQ=60)
GTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACG > SRR4302535.2371974/1‑94 (MQ=60)
GTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACG < SRR4302535.1991883/94‑1 (MQ=60)
GTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACG > SRR4302535.1504663/1‑94 (MQ=60)
GTTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGCAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACG > SRR4302535.1921195/1‑94 (MQ=60)
TTCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGC < SRR4302535.797110/94‑1 (MQ=60)
TCTGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGCTCATCCAACTGCCGATAACCGGCAGCTCTTTACGCA > SRR4302535.617636/1‑94 (MQ=60)
TGTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAAT < SRR4302535.574559/94‑1 (MQ=60)
GTCAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATA < SRR4302535.2672869/94‑1 (MQ=60)
CAGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATT > SRR4302535.1322219/1‑94 (MQ=60)
AGCAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTT < SRR4302535.1539018/94‑1 (MQ=60)
CAACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTG < SRR4302535.3763901/94‑1 (MQ=60)
AACCAGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTGC > SRR4302535.3372432/1‑94 (MQ=60)
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GATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCGGCTCGCCGTTTCCCACTCCTGCCCCGGCCAAGGGCTGGAGTAGTTCATCCAACTGCCGATAACCGTCAGCTCTTTACGCAATATTTTGC > NC_000913/2169897‑2170075
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
