Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,173,756 |
T→C |
T196A (ACT→GCT) |
gatZ ← |
putative tagatose‑6‑phosphate kinase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,173,756 | 0 | T | C | 99.3%
| 460.3
/ ‑4.6
| 145 | T196A (ACT→GCT) | gatZ | putative tagatose‑6‑phosphate kinase 1 |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (64/80); total (64/81) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.21e-01 |
Only 100 of 147 total aligned reads displayed.
CCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGTATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACAT > NC_000913/2173666‑2173845
|
ccACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCAt < 2:2992360/93‑1 (MQ=255)
caccCCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCAtt < 2:3496436/93‑1 (MQ=255)
cacaCCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGTAtt < 1:1446312/93‑1 (MQ=255)
cacaCCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCAtt < 1:2894862/93‑1 (MQ=255)
cacaCCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCAtt < 1:2937618/93‑1 (MQ=255)
cacaCCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCAtt > 2:2422353/1‑93 (MQ=255)
cacaCCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCAtt < 2:1962177/93‑1 (MQ=255)
ccccccGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTg < 2:584055/90‑1 (MQ=255)
cacCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTgg < 2:165718/93‑1 (MQ=255)
cccGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTggcg < 1:683945/93‑1 (MQ=255)
ccGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTggcgg > 1:3163267/1‑93 (MQ=255)
cGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTggcggc < 1:2272446/93‑1 (MQ=255)
cGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTggcggc > 2:2560080/1‑93 (MQ=255)
gCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGTGGCAt < 1:4483611/93‑1 (MQ=255)
gCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCAt > 1:2006996/1‑93 (MQ=255)
gCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCAt < 1:497501/93‑1 (MQ=255)
cTGCGCCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATc < 2:988945/93‑1 (MQ=255)
cTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATc < 1:1066580/93‑1 (MQ=255)
tGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑t < 2:3933233/93‑1 (MQ=255)
tGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑t > 2:2857813/1‑93 (MQ=255)
gCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑tt > 2:1512885/1‑93 (MQ=255)
caccacGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTc < 2:1080902/93‑1 (MQ=255)
accacGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCa > 1:890368/1‑93 (MQ=255)
ccacGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCaa > 2:2608878/1‑93 (MQ=255)
cacGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAAc < 1:4337445/93‑1 (MQ=255)
ccGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACa < 2:2648683/92‑1 (MQ=255)
acGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACa < 1:1226831/93‑1 (MQ=255)
cGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACAt < 1:4020198/93‑1 (MQ=255)
cGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACAt > 2:1521197/1‑93 (MQ=255)
gATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATg < 1:525804/93‑1 (MQ=255)
gATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATg < 2:54232/93‑1 (MQ=255)
agggCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATgg > 2:3579740/3‑93 (MQ=255)
aTGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATgg < 1:434731/93‑1 (MQ=255)
tGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATggg < 2:974656/93‑1 (MQ=255)
ggCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGt > 2:2681331/1‑93 (MQ=255)
aaTCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGAt < 2:2461784/93‑1 (MQ=255)
aaTCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGAt < 1:3947506/93‑1 (MQ=255)
aaTCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGAt > 2:4290119/1‑93 (MQ=255)
tCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGAtgt > 2:2569181/1‑93 (MQ=255)
acacGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATgtgt < 1:3765904/93‑1 (MQ=255)
acacGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATgtgt > 1:954420/1‑93 (MQ=255)
acacGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATgtgt > 2:663033/1‑93 (MQ=255)
acGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTac > 1:791528/1‑93 (MQ=255)
cGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTact < 1:2835553/93‑1 (MQ=255)
gtTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTactgac < 2:777732/93‑1 (MQ=255)
ttAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTactgact > 1:2799062/1‑93 (MQ=255)
aCGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGaa > 2:1591374/1‑93 (MQ=255)
aCGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGaa < 1:527106/93‑1 (MQ=255)
aCGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGaa > 2:3964345/1‑93 (MQ=255)
aCGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGGACTGACTGaa > 2:1408131/1‑93 (MQ=255)
cGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAAt < 2:451739/93‑1 (MQ=255)
cGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAAt < 2:3290/93‑1 (MQ=255)
gCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATg > 2:1586186/1‑93 (MQ=255)
ccTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATgg > 2:307577/1‑93 (MQ=255)
ccTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATgg < 1:1745508/93‑1 (MQ=255)
ccTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATgg < 1:2971274/93‑1 (MQ=255)
ccTCTGTCAGCCCAC‑GGCAATAAAAGACTTTTGATGCGGACCTAAAACAATGGCGGCATCTTTCAAC‑TGGGTGATTTGTAATGGATTAATggg > 2:372340/1‑92 (MQ=255)
ctctGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGgc > 1:3474274/1‑93 (MQ=255)
ttGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TGCAACATGGGTGATGTGTACTGACTGAATGgcgc < 2:3502180/92‑1 (MQ=255)
gTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTg > 1:188988/1‑93 (MQ=255)
tCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTgg < 1:858697/93‑1 (MQ=255)
aGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGcc < 2:3719106/93‑1 (MQ=255)
gCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCt > 1:2923856/1‑93 (MQ=255)
gCCCACGGGCAATAAAGGCCTTTTGATGCGTACGT‑AAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTAATGACTGAATGGCGCTGGGCTc > 1:2491825/1‑93 (MQ=255)
cACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCAc < 1:4573445/93‑1 (MQ=255)
aCGGGCAATAAAGGCCTTTTGATGCGTACGTAACGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCAcc < 1:1076208/93‑1 (MQ=255)
aCGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCAcc < 2:3284778/93‑1 (MQ=255)
cAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccg > 1:877314/1‑93 (MQ=255)
aaTAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccgg > 1:4011297/1‑93 (MQ=255)
aaTAAAGGCCTTTTGATGCGTACGTAAAGCATTGGAGGCATC‑TTCAAAATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccgg > 2:4599626/1‑93 (MQ=255)
aTAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccgga > 1:3191691/1‑93 (MQ=255)
tAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaa > 1:961457/1‑93 (MQ=255)
tAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaa < 2:3544324/93‑1 (MQ=255)
tAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaa > 2:3701675/1‑93 (MQ=255)
aaaGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaac > 1:3979937/1‑93 (MQ=255)
aaGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaacc > 1:1399854/1‑93 (MQ=255)
aaGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaacc < 2:232864/93‑1 (MQ=255)
aGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGGCTGAATGGCGCTGGCCTCACCGCccggaaccg > 1:1833491/1‑93 (MQ=255)
aGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaaccg > 1:2269426/1‑93 (MQ=255)
ggCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaaccgg > 2:659399/1‑93 (MQ=255)
gCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaaccgga > 1:1035783/1‑93 (MQ=255)
ccTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGTCTGAATGGCGCTGGCCTCACAGCccggaaccggac > 2:4205843/1‑92 (MQ=255)
ccTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCccggaaccggaa > 1:1532529/1‑93 (MQ=255)
cTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCcggaaccggaac < 1:2765801/93‑1 (MQ=255)
cTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCcggaaccggaac > 1:3464065/1‑93 (MQ=255)
cTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCcggaaccggaac < 1:3740814/93‑1 (MQ=255)
cTTTTGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCcggaaccggaac < 2:1995407/93‑1 (MQ=255)
ttttGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACt > 1:4454714/1‑93 (MQ=255)
ttttGATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACt > 2:778432/1‑93 (MQ=255)
gATGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCgg > 1:3056886/1‑93 (MQ=255)
aTGCGTACGTAAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGt < 1:2110390/93‑1 (MQ=255)
tacgtaAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCaa < 2:1103310/93‑1 (MQ=255)
tacgtaAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCaa < 1:2819350/93‑1 (MQ=255)
gtaAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGa > 1:4299737/1‑93 (MQ=255)
gtaAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGa > 1:889260/1‑93 (MQ=255)
taAAGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGAc > 1:678926/1‑93 (MQ=255)
aaaGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACa < 2:1206463/93‑1 (MQ=255)
aaGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACAt < 1:1168626/93‑1 (MQ=255)
aaGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACAt < 1:3083080/93‑1 (MQ=255)
aaGCATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACAt < 2:178310/93‑1 (MQ=255)
|
CCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGTATTGGCGGCATC‑TTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACAT > NC_000913/2173666‑2173845
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGTATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACATAGCT > NC_000913/2173663‑2173849
|
ATTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGC > SRR4302535.3897825/1‑94 (MQ=60)
ATTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGC > SRR4302535.2390981/1‑94 (MQ=60)
ATTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGC > SRR4302535.1667121/1‑94 (MQ=60)
ATTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGC > SRR4302535.4617973/1‑94 (MQ=60)
TTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCA < SRR4302535.2006900/94‑1 (MQ=60)
TTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCA < SRR4302535.4139545/94‑1 (MQ=60)
CACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGTATTG < SRR4302535.1456657/94‑1 (MQ=60)
CACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTG < SRR4302535.2958283/94‑1 (MQ=60)
CACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTG < SRR4302535.2958282/94‑1 (MQ=60)
CACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTG < SRR4302535.2915336/94‑1 (MQ=60)
ACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGG < SRR4302535.3901527/94‑1 (MQ=60)
CCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGG > SRR4302535.3185205/1‑94 (MQ=60)
CCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGG < SRR4302535.688730/94‑1 (MQ=60)
CGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCA < SRR4302535.2288656/94‑1 (MQ=60)
GGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCAT > SRR4302535.2021454/1‑94 (MQ=60)
GCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGTGGCATC < SRR4302535.4514386/94‑1 (MQ=60)
GCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATC < SRR4302535.500992/94‑1 (MQ=60)
CTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCT < SRR4302535.1074166/94‑1 (MQ=60)
CACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCA > SRR4302535.896678/1‑94 (MQ=60)
CACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACA < SRR4302535.4367108/94‑1 (MQ=60)
CACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACA > SRR4302535.2821431/1‑94 (MQ=60)
CACGATGGCAATCACACGTGTTAAAGCCTCTGTCAGCCCAAGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACA > SRR4302535.715188/1‑94 (MQ=60)
ACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACAT < SRR4302535.1235605/94‑1 (MQ=60)
CGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATG < SRR4302535.4047706/94‑1 (MQ=60)
GATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGG < SRR4302535.529475/94‑1 (MQ=60)
ATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGG < SRR4302535.3747826/94‑1 (MQ=60)
ATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGG < SRR4302535.437760/94‑1 (MQ=60)
TGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGT < SRR4302535.64835/94‑1 (MQ=60)
AATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATG < SRR4302535.3974458/94‑1 (MQ=60)
CACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGT > SRR4302535.961182/1‑94 (MQ=60)
ACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTA < SRR4302535.3791913/94‑1 (MQ=60)
CACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTAC > SRR4302535.797082/1‑94 (MQ=60)
CGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTG < SRR4302535.2855677/94‑1 (MQ=60)
TGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGAC > SRR4302535.1804777/1‑94 (MQ=60)
GTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACT > SRR4302535.2818979/1‑94 (MQ=60)
ACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAAT < SRR4302535.909093/94‑1 (MQ=60)
ACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAAT < SRR4302535.530789/94‑1 (MQ=60)
ACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAAT > SRR4302535.2904634/1‑94 (MQ=60)
CGCCTATGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATG > SRR4302535.1092105/1‑94 (MQ=60)
CCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGC < SRR4302535.2992129/94‑1 (MQ=60)
CCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGC < SRR4302535.1758139/94‑1 (MQ=60)
CCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGC > SRR4302535.3498414/1‑94 (MQ=60)
TGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTG > SRR4302535.190294/1‑94 (MQ=60)
TCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGC < SRR4302535.864755/94‑1 (MQ=60)
AGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCT < SRR4302535.3373442/94‑1 (MQ=60)
AGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCT < SRR4302535.4449819/94‑1 (MQ=60)
AGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCT > SRR4302535.2944474/1‑94 (MQ=60)
AGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGT‑AAGCATTGGCGGCATCTTCAACATGGGTGATGTGTAATGACTGAATGGCGCTGGGCTC > SRR4302535.2509807/1‑94 (MQ=60)
CACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACC < SRR4302535.4604620/94‑1 (MQ=60)
ACGGGCAATAAAGGCCTTTTGATGCGTACGTAACGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCG < SRR4302535.1083858/94‑1 (MQ=60)
GCAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCG > SRR4302535.883527/1‑94 (MQ=60)
CAATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGG > SRR4302535.4038739/1‑94 (MQ=60)
AATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCTCCCGGA > SRR4302535.2267776/1‑94 (MQ=60)
AATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGA > SRR4302535.3213768/1‑94 (MQ=60)
ATAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAA > SRR4302535.968289/1‑94 (MQ=60)
TAAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAAC > SRR4302535.4007130/1‑94 (MQ=60)
AAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACC < SRR4302535.87644/94‑1 (MQ=60)
AAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACC < SRR4302535.1914760/94‑1 (MQ=60)
AAAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACC > SRR4302535.1409850/1‑94 (MQ=60)
AAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGGCTGAATGGCGCTGGCCTCACCGCCCGGAACCG > SRR4302535.1846720/1‑94 (MQ=60)
AAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCG > SRR4302535.1489808/1‑94 (MQ=60)
AAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCG > SRR4302535.2285608/1‑94 (MQ=60)
AAGGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCG > SRR4302535.4535221/1‑94 (MQ=60)
GGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGA > SRR4302535.4341196/1‑94 (MQ=60)
GGCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGA > SRR4302535.1043139/1‑94 (MQ=60)
GCCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAA > SRR4302535.1543571/1‑94 (MQ=60)
CCTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAAC > SRR4302535.3488143/1‑94 (MQ=60)
CTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACT < SRR4302535.3766703/94‑1 (MQ=60)
CTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACT < SRR4302535.2785498/94‑1 (MQ=60)
CTTTTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACT > SRR4302535.4485263/1‑94 (MQ=60)
TTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCG < SRR4302535.1296617/94‑1 (MQ=60)
TTGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCG < SRR4302535.3110633/94‑1 (MQ=60)
TGATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGG > SRR4302535.3078278/1‑94 (MQ=60)
ATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTG < SRR4302535.520565/94‑1 (MQ=60)
ATGCGTACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTG < SRR4302535.2125613/94‑1 (MQ=60)
TACGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAAT < SRR4302535.2839374/94‑1 (MQ=60)
CGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGA > SRR4302535.895562/1‑94 (MQ=60)
CGTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGA > SRR4302535.4329160/1‑94 (MQ=60)
GTAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGAC > SRR4302535.683674/1‑94 (MQ=60)
TAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACA < SRR4302535.2301970/94‑1 (MQ=60)
TAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACA < SRR4302535.404299/94‑1 (MQ=60)
TAAAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACA < SRR4302535.3024894/94‑1 (MQ=60)
AAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACATA < SRR4302535.3104564/94‑1 (MQ=60)
AAGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACATA < SRR4302535.1176968/94‑1 (MQ=60)
AGCATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACATAG < SRR4302535.1415786/94‑1 (MQ=60)
CATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACATAGCT > SRR4302535.4019178/1‑94 (MQ=60)
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ATTCCACACCCGGCTGCACCACGATGGCAATCACACGTGTTAACGCCTCTGTCAGCCCACGGGCAATAAAGGCCTTTTGATGCGTACGTAAAGTATTGGCGGCATCTTCAACATGGGTGATGTGTACTGACTGAATGGCGCTGGCCTCACCGCCCGGAACCGGAACTTCGGTGCCAATGACATAGCT > NC_000913/2173663‑2173849
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
