Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,288,635 |
G→A |
G39D (GGC→GAC) |
narP → |
nitrate/nitrite response regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,288,635 | 0 | G | A | 99.4%
| 616.8
/ ‑5.5
| 172 | G39D (GGC→GAC) | narP | nitrate/nitrite response regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (63/108); total (63/109) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01 |
Only 100 of 180 total aligned reads displayed.
TGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGGCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATA > NC_000913/2288545‑2288727
|
gatgatTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGa < 2:2230940/93‑1 (MQ=255)
gatgatTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTAAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGa > 1:1553907/1‑93 (MQ=255)
gatTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACgg > 2:3541900/1‑93 (MQ=255)
gatTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACgg > 1:20756/1‑93 (MQ=255)
tgGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGa < 2:1071534/93‑1 (MQ=255)
tgGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGa < 2:2124209/93‑1 (MQ=255)
ggATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGGTCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAg < 2:1151835/93‑1 (MQ=255)
gatgatCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAgc > 1:96573/1‑93 (MQ=255)
atgatCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCC‑AAGCGGACGACGGCGCGAgcgc < 1:2379955/93‑1 (MQ=255)
tgatCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAgcgc > 2:3601072/1‑93 (MQ=255)
tgatCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTAGTCGCCGAAGCGGACGACGGCGCGAgcgc < 2:151677/93‑1 (MQ=255)
atcatcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTa > 1:2750265/1‑93 (MQ=255)
atcatcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTa > 2:3919872/1‑93 (MQ=255)
tcatcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTAt > 1:2751926/1‑93 (MQ=255)
tcatcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTAt > 1:191998/1‑93 (MQ=255)
catcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATc < 1:2998264/93‑1 (MQ=255)
catcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATc < 2:4162855/93‑1 (MQ=255)
catcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATc < 2:192867/93‑1 (MQ=255)
atcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCg > 2:2743931/1‑93 (MQ=255)
tcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGa < 1:1989762/93‑1 (MQ=255)
tcCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGa < 2:3382631/93‑1 (MQ=255)
ccACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGAt < 1:3754643/93‑1 (MQ=255)
cACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATc > 1:2393090/1‑93 (MQ=255)
aCTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCt > 1:331177/1‑93 (MQ=255)
aCTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCt < 1:1977981/93‑1 (MQ=255)
cTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTg > 2:2793001/1‑93 (MQ=255)
cTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTg < 1:4515465/93‑1 (MQ=255)
ttATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTgg < 2:3806527/93‑1 (MQ=255)
ttATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTgg > 1:2403861/1‑93 (MQ=255)
gCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGaa < 2:2425339/93‑1 (MQ=255)
cGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAAt < 2:1600755/93‑1 (MQ=255)
gACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATa > 2:523025/1‑93 (MQ=255)
gACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATa < 2:3857439/93‑1 (MQ=255)
gACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATa < 1:631092/93‑1 (MQ=255)
aCGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAg > 2:1994742/1‑93 (MQ=255)
cgcgGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGa < 1:3014757/93‑1 (MQ=255)
cgcgGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGa > 2:925196/1‑93 (MQ=255)
gcgGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGAc < 2:2117471/93‑1 (MQ=255)
gcgGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGAc < 2:1438032/93‑1 (MQ=255)
cgGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACt < 1:707118/93‑1 (MQ=255)
cgGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACt < 2:1477119/93‑1 (MQ=255)
cgGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACt < 2:3736311/93‑1 (MQ=255)
ggTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTg > 2:568670/1‑93 (MQ=255)
ggTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTg > 2:796698/1‑93 (MQ=255)
tgtTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGa < 2:4305806/93‑1 (MQ=255)
gtTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTTGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGat > 2:4549433/1‑93 (MQ=255)
gtTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGat > 1:3428876/1‑93 (MQ=255)
ttCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGATTGGata > 2:3541731/1‑93 (MQ=255)
ttCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGata < 2:2452739/93‑1 (MQ=255)
ttCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGata < 2:4576756/93‑1 (MQ=255)
ttCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGata > 1:2154971/1‑93 (MQ=255)
ttCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGata > 1:940175/1‑93 (MQ=255)
ttCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGata < 1:1364853/93‑1 (MQ=255)
ttCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGata < 1:403760/93‑1 (MQ=255)
tCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGatat < 1:594981/93‑1 (MQ=255)
cGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATc < 2:1262207/93‑1 (MQ=255)
gTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCg > 1:4309275/1‑93 (MQ=255)
tCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGa > 2:1016692/1‑93 (MQ=255)
tCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGa < 1:2290670/93‑1 (MQ=255)
tCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGa > 2:3348333/1‑93 (MQ=255)
cAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGAc < 1:3378234/93‑1 (MQ=255)
cAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGAc < 1:3116707/93‑1 (MQ=255)
aGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACg > 1:873897/1‑93 (MQ=255)
gTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGt < 1:139654/93‑1 (MQ=255)
gTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGt > 1:1229349/1‑93 (MQ=255)
tACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGa > 2:1832964/1‑93 (MQ=255)
tACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGa < 2:3210743/93‑1 (MQ=255)
acgggAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGAt < 2:902195/90‑1 (MQ=255)
cTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATc < 2:414467/93‑1 (MQ=255)
tGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCt < 2:745919/93‑1 (MQ=255)
aGCTTGATCCTGGCTCTGAAGGGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATACCGACGTGATCTTGc < 2:141377/93‑1 (MQ=255)
gCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCt < 1:1514734/93‑1 (MQ=255)
gATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGAt < 2:16294/93‑1 (MQ=255)
aTCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGAtc > 1:107809/1‑93 (MQ=255)
tCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGAtct > 2:2583082/1‑93 (MQ=255)
tCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGAtcc > 2:1182870/1‑92 (MQ=255)
cTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCa < 2:3003421/93‑1 (MQ=255)
ggCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAat < 1:1685962/93‑1 (MQ=255)
gCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGCTCTCAata < 2:4577970/93‑1 (MQ=255)
gCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAata < 2:432737/93‑1 (MQ=255)
ctctGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAatat < 2:1572478/93‑1 (MQ=255)
tGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGaa > 2:3003362/1‑93 (MQ=255)
gAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGaaa < 1:1138875/93‑1 (MQ=255)
aaGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAg < 1:354366/93‑1 (MQ=255)
aGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAgg < 1:4126826/93‑1 (MQ=255)
aGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAgg < 2:600740/93‑1 (MQ=255)
tGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTa < 2:3751466/93‑1 (MQ=255)
gTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATg > 2:2323931/1‑93 (MQ=255)
gTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATg < 2:3265975/93‑1 (MQ=255)
gcGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGa < 1:2559890/92‑1 (MQ=255)
cGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAg < 1:4655592/93‑1 (MQ=255)
cGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAg < 1:2907765/93‑1 (MQ=255)
cGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAg < 1:1609101/93‑1 (MQ=255)
gCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGt < 1:738544/93‑1 (MQ=255)
gCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGt > 1:2180522/1‑93 (MQ=255)
ccGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTg < 1:3249805/93‑1 (MQ=255)
ccGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTg < 2:722350/93‑1 (MQ=255)
aaGCGGGCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGcc < 2:4042051/93‑1 (MQ=255)
aaGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGcc > 1:294447/1‑93 (MQ=255)
cGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTgg < 2:3785781/93‑1 (MQ=255)
|
TGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGGCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATA > NC_000913/2288545‑2288727
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGGTGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGGCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATAC > NC_000913/2288542‑2288728
|
AGGTGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGA > SRR4302535.2342706/1‑94 (MQ=60)
GGTGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGAC < SRR4302535.4207537/94‑1 (MQ=60)
GGTGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTCACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGAC < SRR4302535.2534232/94‑1 (MQ=60)
TGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGA > SRR4302535.4089656/1‑94 (MQ=60)
TGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTAAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGA > SRR4302535.1565103/1‑94 (MQ=60)
TGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGG > SRR4302535.20910/1‑94 (MQ=60)
GATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGC > SRR4302535.1216101/1‑94 (MQ=60)
ATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCG > SRR4302535.3391633/1‑94 (MQ=60)
ATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCG > SRR4302535.2406503/1‑94 (MQ=60)
TGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAG < SRR4302535.3689089/94‑1 (MQ=60)
GGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGC > SRR4302535.2417102/1‑94 (MQ=60)
GGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGC > SRR4302535.97256/1‑94 (MQ=60)
GGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGC > SRR4302535.1837268/1‑94 (MQ=60)
ATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCC‑AAGCGGACGACGGCGCGAGCGCT < SRR4302535.2397045/94‑1 (MQ=60)
GATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTA > SRR4302535.2769872/1‑94 (MQ=60)
ATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTAT < SRR4302535.2942000/94‑1 (MQ=60)
ATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTAT > SRR4302535.2771540/1‑94 (MQ=60)
ATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTAT > SRR4302535.193324/1‑94 (MQ=60)
CATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCG < SRR4302535.3019289/94‑1 (MQ=60)
ATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGA > SRR4302535.1950622/1‑94 (MQ=60)
TCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGAT < SRR4302535.2004087/94‑1 (MQ=60)
CCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATC > SRR4302535.2410290/1‑94 (MQ=60)
CCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATC < SRR4302535.3780617/94‑1 (MQ=60)
CACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCT > SRR4302535.333473/1‑94 (MQ=60)
ACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTG < SRR4302535.1992227/94‑1 (MQ=60)
CTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGG < SRR4302535.1391060/94‑1 (MQ=60)
CTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGG < SRR4302535.4546424/94‑1 (MQ=60)
CTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGG > SRR4302535.2421155/1‑94 (MQ=60)
GACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAG < SRR4302535.635494/94‑1 (MQ=60)
CGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGAC < SRR4302535.3035887/94‑1 (MQ=60)
CGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGAC < SRR4302535.2047840/94‑1 (MQ=60)
CGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTG < SRR4302535.712083/94‑1 (MQ=60)
GTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGA > SRR4302535.2127709/1‑94 (MQ=60)
TGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGAT < SRR4302535.968606/94‑1 (MQ=60)
TGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGAT > SRR4302535.3452710/1‑94 (MQ=60)
GTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATA > SRR4302535.2170456/1‑94 (MQ=60)
GTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATA > SRR4302535.946831/1‑94 (MQ=60)
TTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATAT < SRR4302535.1374614/94‑1 (MQ=60)
TTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATAT < SRR4302535.406588/94‑1 (MQ=60)
TTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATAT < SRR4302535.1248802/94‑1 (MQ=60)
TCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATC < SRR4302535.599150/94‑1 (MQ=60)
CGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCG > SRR4302535.4338756/1‑94 (MQ=60)
GTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGA > SRR4302535.4581378/1‑94 (MQ=60)
TCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGAC < SRR4302535.2307059/94‑1 (MQ=60)
CAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACG < SRR4302535.3401723/94‑1 (MQ=60)
CAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACG > SRR4302535.880090/1‑94 (MQ=60)
CAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACG < SRR4302535.3138404/94‑1 (MQ=60)
AGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGT > SRR4302535.1238133/1‑94 (MQ=60)
GTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTG < SRR4302535.140634/94‑1 (MQ=60)
GTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGACGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTG < SRR4302535.3328013/94‑1 (MQ=60)
GCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTG < SRR4302535.1525646/94‑1 (MQ=60)
GCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTG < SRR4302535.2612670/94‑1 (MQ=60)
CTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGG < SRR4302535.3022320/94‑1 (MQ=60)
GATCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATC > SRR4302535.108572/1‑94 (MQ=60)
ATCCTGGCTCTGAAGTGGTCGCGTAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCT < SRR4302535.797582/94‑1 (MQ=60)
TCCTGGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCAACGTGATCTTGCTGGATCTC < SRR4302535.3194647/94‑1 (MQ=60)
GGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATA < SRR4302535.1698168/94‑1 (MQ=60)
GGCTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATA < SRR4302535.1595568/94‑1 (MQ=60)
CTCTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATG > SRR4302535.887964/1‑94 (MQ=60)
CTGAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAA > SRR4302535.607347/1‑94 (MQ=60)
GAAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAG < SRR4302535.1146993/94‑1 (MQ=60)
AAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGG < SRR4302535.356812/94‑1 (MQ=60)
AAGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGG < SRR4302535.2185873/94‑1 (MQ=60)
AGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGT < SRR4302535.4155065/94‑1 (MQ=60)
AGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGT < SRR4302535.663032/94‑1 (MQ=60)
AGTGGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGA > SRR4302535.2987658/1‑94 (MQ=60)
GGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATG > SRR4302535.1508618/1‑94 (MQ=60)
GGTCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATG < SRR4302535.2476039/94‑1 (MQ=60)
GCGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAG < SRR4302535.2578318/94‑1 (MQ=60)
CGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGT < SRR4302535.1620705/94‑1 (MQ=60)
CGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGT < SRR4302535.2928317/94‑1 (MQ=60)
CGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGT < SRR4302535.4687100/94‑1 (MQ=60)
CGCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGT > SRR4302535.2196083/1‑94 (MQ=60)
GCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTG < SRR4302535.743738/94‑1 (MQ=60)
GCCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTG < SRR4302535.516749/94‑1 (MQ=60)
CCGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGG < SRR4302535.3272384/94‑1 (MQ=60)
CGAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGC > SRR4302535.3446515/1‑94 (MQ=60)
GAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCC > SRR4302535.2273144/1‑94 (MQ=60)
GAAGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCC > SRR4302535.296503/1‑94 (MQ=60)
AGCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTG > SRR4302535.2921950/1‑94 (MQ=60)
GCGGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGG < SRR4302535.1660681/94‑1 (MQ=60)
GGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGAT < SRR4302535.499735/94‑1 (MQ=60)
GGACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGAT < SRR4302535.3395721/94‑1 (MQ=60)
GCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATAC < SRR4302535.4510612/94‑1 (MQ=60)
ACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATAC < SRR4302535.2083256/94‑1 (MQ=60)
ACGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATAC < SRR4302535.1413133/94‑1 (MQ=60)
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AGGTGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGGCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATAC > NC_000913/2288542‑2288728
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
