Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,947,112 |
T→C |
intergenic (‑80/‑152) |
b2817 ← / → argA |
putative amidase/N‑acetylglutamate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,947,112 | 0 | T | C | 99.0%
| 603.2
/ ‑3.2
| 193 | intergenic (‑80/‑152) | b2817/argA | putative amidase/N‑acetylglutamate synthase |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (99/92); total (101/92) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 |
Only 100 of 194 total aligned reads displayed.
GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC > NC_000913/2947022‑2947201
|
gATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACaa < 2:4072428/93‑1 (MQ=255)
gATCCTGACACGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATGGGACCGGAAACTTTAGCGAAAGACGCACaa < 1:1978196/93‑1 (MQ=255)
aTCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAAt > 1:1462885/1‑93 (MQ=255)
aTCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAAt < 1:4305058/93‑1 (MQ=255)
tCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc < 2:4214699/93‑1 (MQ=255)
tCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc > 2:1524896/1‑93 (MQ=255)
tCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc < 1:4176127/93‑1 (MQ=255)
tGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGCAAGACGCACAATCTgc > 2:3499703/1‑92 (MQ=255)
gACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTc > 2:1022923/1‑93 (MQ=255)
cATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAt > 2:2782682/1‑93 (MQ=255)
aTGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc < 2:4685212/93‑1 (MQ=255)
aTGCCTCGCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATc > 2:4607700/1‑93 (MQ=255)
gCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCta < 1:37691/93‑1 (MQ=255)
ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat < 1:1106179/93‑1 (MQ=255)
ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat > 1:2578892/1‑93 (MQ=255)
ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat > 1:1751426/1‑93 (MQ=255)
tctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaata > 1:3501807/1‑93 (MQ=255)
tctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaata > 2:667215/1‑93 (MQ=255)
tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa < 1:571257/93‑1 (MQ=255)
tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa < 1:42322/93‑1 (MQ=255)
cccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAc < 1:2281867/93‑1 (MQ=255)
cccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAc < 1:2947147/93‑1 (MQ=255)
ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg < 1:2334586/93‑1 (MQ=255)
ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg < 1:2091663/93‑1 (MQ=255)
ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg < 1:3221700/93‑1 (MQ=255)
ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACg < 1:2987955/93‑1 (MQ=255)
cGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgg > 1:3475608/1‑93 (MQ=255)
gCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaa < 1:1859581/93‑1 (MQ=255)
aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAAc > 1:4272404/1‑93 (MQ=255)
aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc < 2:1782340/93‑1 (MQ=255)
aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc > 1:3660167/1‑93 (MQ=255)
aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc > 1:1340650/1‑93 (MQ=255)
aaaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAc > 2:2320266/1‑93 (MQ=255)
aaagaaagCTAGGCTGCGTAACAAGTAATTGACTGTTGCGGCCGGAAACTTTAGCGGAAGACGCACAAGCTTGCAGCGAATAAACGGTAAACa < 2:4368671/93‑1 (MQ=255)
aaaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACa < 2:1298736/93‑1 (MQ=255)
aaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAt > 2:299212/1‑93 (MQ=255)
aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt < 1:1689373/93‑1 (MQ=255)
aaaaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTc < 2:2052326/92‑1 (MQ=255)
aaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtt > 2:4458251/1‑93 (MQ=255)
aaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtt < 2:3638129/93‑1 (MQ=255)
aTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttt > 2:1955016/1‑93 (MQ=255)
tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt > 1:4112854/1‑93 (MQ=255)
tCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtttt < 2:4601183/93‑1 (MQ=255)
tAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTta > 2:1714029/1‑93 (MQ=255)
aaGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtat < 2:2497954/93‑1 (MQ=255)
aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata > 2:2801222/1‑93 (MQ=255)
gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat > 2:691897/1‑93 (MQ=255)
gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat < 1:2746969/93‑1 (MQ=255)
gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat < 1:2389240/93‑1 (MQ=255)
cTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAtt < 1:4142387/93‑1 (MQ=255)
tgtAACAAGTAGTCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAc < 2:3898170/93‑1 (MQ=255)
tgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAc < 1:39405/93‑1 (MQ=255)
gtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACg > 1:14878/1‑93 (MQ=255)
gtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACg > 2:2950351/1‑93 (MQ=255)
aaCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGc > 2:1266714/1‑93 (MQ=255)
aCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCa < 2:142587/93‑1 (MQ=255)
aCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCa < 1:2163655/93‑1 (MQ=255)
cAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAt > 2:3534483/1‑93 (MQ=255)
cAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAt < 2:993676/93‑1 (MQ=255)
gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAc > 1:3823252/1‑93 (MQ=255)
aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa > 2:3094797/1‑93 (MQ=255)
aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa < 1:675499/93‑1 (MQ=255)
gACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaa > 1:1004992/1‑93 (MQ=255)
aCTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaa < 1:3398052/93‑1 (MQ=255)
aCTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaa > 1:1418469/1‑93 (MQ=255)
aCTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaa > 2:568072/1‑93 (MQ=255)
cTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaa > 1:737517/1‑93 (MQ=255)
tAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaa > 1:1628242/1‑93 (MQ=255)
aaTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa < 1:3328340/93‑1 (MQ=255)
aaTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaaaaa > 2:2431010/1‑93 (MQ=255)
aTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAg < 2:4121990/93‑1 (MQ=255)
aTTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAg < 2:3871502/93‑1 (MQ=255)
tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt > 2:3777398/1‑93 (MQ=255)
tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt < 2:1181074/93‑1 (MQ=255)
tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt > 1:360468/1‑93 (MQ=255)
gACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGc > 2:4352820/1‑93 (MQ=255)
ccGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctc > 1:4674923/1‑93 (MQ=255)
cGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctct < 2:331377/93‑1 (MQ=255)
aaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCa > 2:3699848/1‑93 (MQ=255)
aaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCa > 2:3084632/1‑93 (MQ=255)
aaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCa > 2:1126537/1‑93 (MQ=255)
aaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCa > 1:3076789/1‑93 (MQ=255)
aCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAt > 1:880794/1‑93 (MQ=255)
aCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAt > 1:385062/1‑93 (MQ=255)
aCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAt > 1:2364867/1‑93 (MQ=255)
cTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATa > 1:1179850/1‑93 (MQ=255)
tttAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaa > 2:2727947/1‑93 (MQ=255)
ttAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaaa > 2:358386/1‑93 (MQ=255)
ttAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaaa > 1:4563328/1‑93 (MQ=255)
tAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaaaa < 2:1582229/93‑1 (MQ=255)
gCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAtt > 1:500990/1‑93 (MQ=255)
gAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTa > 2:449189/1‑93 (MQ=255)
caaaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTa > 2:3182396/2‑93 (MQ=255)
aaaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTac > 2:2298439/1‑93 (MQ=255)
aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca > 1:923986/1‑93 (MQ=255)
aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca < 2:1930052/93‑1 (MQ=255)
aGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTacac < 2:3848846/93‑1 (MQ=255)
aGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTacac < 1:3799145/93‑1 (MQ=255)
cGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTg < 1:1565312/93‑1 (MQ=255)
gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc > 2:2388647/1‑93 (MQ=255)
|
GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC > NC_000913/2947022‑2947201
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC > NC_000913/2947019‑2947205
|
TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCAC < SRR4302535.12973/94‑1 (MQ=60)
TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCAC < SRR4302535.29923/94‑1 (MQ=60)
TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCAA > SRR4302535.3157427/1‑94 (MQ=60)
GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAAT > SRR4302535.1473365/1‑94 (MQ=60)
GATCCTGACACGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATGGGACCGGAAACTTTAGCGAAAGACGCACAAT < SRR4302535.1992442/94‑1 (MQ=60)
ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC > SRR4302535.185557/1‑94 (MQ=60)
ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC < SRR4302535.4334512/94‑1 (MQ=60)
ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC > SRR4302535.1330233/1‑94 (MQ=60)
ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC > SRR4302535.379832/1‑94 (MQ=60)
TCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCT < SRR4302535.4204713/94‑1 (MQ=60)
CCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTG > SRR4302535.4320681/1‑94 (MQ=60)
CTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGT < SRR4302535.4004442/94‑1 (MQ=60)
GACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCA > SRR4302535.999932/1‑94 (MQ=60)
ACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAT < SRR4302535.833311/94‑1 (MQ=60)
GCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAA < SRR4302535.3512580/94‑1 (MQ=60)
GCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAA < SRR4302535.37981/94‑1 (MQ=60)
CCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAAT > SRR4302535.2597421/1‑94 (MQ=60)
CCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAAT > SRR4302535.1764088/1‑94 (MQ=60)
CTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATA > SRR4302535.3526151/1‑94 (MQ=60)
CTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATA < SRR4302535.1114081/94‑1 (MQ=60)
TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC < SRR4302535.42645/94‑1 (MQ=60)
TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC < SRR4302535.4647218/94‑1 (MQ=60)
TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC < SRR4302535.525373/94‑1 (MQ=60)
TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC < SRR4302535.575267/94‑1 (MQ=60)
TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC < SRR4302535.2679294/94‑1 (MQ=60)
CCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACG < SRR4302535.712461/94‑1 (MQ=60)
CCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACG < SRR4302535.2967855/94‑1 (MQ=60)
CCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACG < SRR4302535.2298168/94‑1 (MQ=60)
CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG > SRR4302535.614487/1‑94 (MQ=60)
CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG > SRR4302535.3499761/1‑94 (MQ=60)
CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG < SRR4302535.3244028/94‑1 (MQ=60)
CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG < SRR4302535.3008908/94‑1 (MQ=60)
CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG < SRR4302535.2351294/94‑1 (MQ=60)
CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG < SRR4302535.2106736/94‑1 (MQ=60)
GCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAA < SRR4302535.1872988/94‑1 (MQ=60)
CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAAC > SRR4302535.4301651/1‑94 (MQ=60)
CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAAC > SRR4302535.3141377/1‑94 (MQ=60)
CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC > SRR4302535.1350213/1‑94 (MQ=60)
CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC > SRR4302535.3685502/1‑94 (MQ=60)
CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC < SRR4302535.1467233/94‑1 (MQ=60)
AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC < SRR4302535.223988/94‑1 (MQ=60)
AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC > SRR4302535.1734391/1‑94 (MQ=60)
AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC > SRR4302535.202850/1‑94 (MQ=60)
AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC < SRR4302535.1701601/94‑1 (MQ=60)
GAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCT < SRR4302535.1967962/94‑1 (MQ=60)
AAATCTAAGCTGTGTAACAATTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCGAATAAACGGTAAACATTCTT < SRR4302535.3684634/94‑1 (MQ=60)
ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT > SRR4302535.2814543/1‑94 (MQ=60)
ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT > SRR4302535.4141007/1‑94 (MQ=60)
TCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTT < SRR4302535.4271987/94‑1 (MQ=60)
CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA > SRR4302535.4517680/1‑94 (MQ=60)
TAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTAT < SRR4302535.2303081/94‑1 (MQ=60)
TAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTAT > SRR4302535.3380634/1‑94 (MQ=60)
AAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATA < SRR4302535.3452423/94‑1 (MQ=60)
AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT > SRR4302535.3054250/1‑94 (MQ=60)
GCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATT < SRR4302535.2406415/94‑1 (MQ=60)
GCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATT < SRR4302535.2766550/94‑1 (MQ=60)
CTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTC < SRR4302535.4170752/94‑1 (MQ=60)
CTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTC > SRR4302535.374132/1‑94 (MQ=60)
TGTAACAAGTAAACGACTAATTTGACCGGAATCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTATTATATTCACG > SRR4302535.4712621/1‑94 (MQ=60)
TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG < SRR4302535.89765/94‑1 (MQ=60)
TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG > SRR4302535.14985/1‑94 (MQ=60)
TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG < SRR4302535.39707/94‑1 (MQ=60)
TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG < SRR4302535.4164082/94‑1 (MQ=60)
ACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAT < SRR4302535.2179175/94‑1 (MQ=60)
ACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAT < SRR4302535.2563287/94‑1 (MQ=60)
CAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATT < SRR4302535.3842420/94‑1 (MQ=60)
AAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTA < SRR4302535.2384840/94‑1 (MQ=60)
AGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAC > SRR4302535.2167170/1‑94 (MQ=60)
AGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAC > SRR4302535.3849623/1‑94 (MQ=60)
AACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGAT < SRR4302535.680219/94‑1 (MQ=60)
CGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAA > SRR4302535.1012134/1‑94 (MQ=60)
GACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAA > SRR4302535.1428597/1‑94 (MQ=60)
ACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAA < SRR4302535.3421696/94‑1 (MQ=60)
ACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAA > SRR4302535.742702/1‑94 (MQ=60)
CTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAA > SRR4302535.3929525/1‑94 (MQ=60)
CTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAA > SRR4302535.1599139/1‑94 (MQ=60)
CTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAA > SRR4302535.1639997/1‑94 (MQ=60)
AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG < SRR4302535.3351495/94‑1 (MQ=60)
AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG > SRR4302535.1668542/1‑94 (MQ=60)
ATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGT > SRR4302535.362960/1‑94 (MQ=60)
ATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGT < SRR4302535.1413674/94‑1 (MQ=60)
TTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTC < SRR4302535.3547194/94‑1 (MQ=60)
TGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGC < SRR4302535.2995769/94‑1 (MQ=60)
ACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTC > SRR4302535.4706483/1‑94 (MQ=60)
CCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT > SRR4302535.4215904/1‑94 (MQ=60)
CCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT > SRR4302535.1562368/1‑94 (MQ=60)
CGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTC > SRR4302535.4190146/1‑94 (MQ=60)
AAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCA > SRR4302535.3098252/1‑94 (MQ=60)
AACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAT > SRR4302535.387733/1‑94 (MQ=60)
AACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAT > SRR4302535.2381847/1‑94 (MQ=60)
AACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAT > SRR4302535.887030/1‑94 (MQ=60)
ACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATA > SRR4302535.1188269/1‑94 (MQ=60)
TTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAA > SRR4302535.4594470/1‑94 (MQ=60)
TAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAT < SRR4302535.1481186/94‑1 (MQ=60)
AGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATT > SRR4302535.504497/1‑94 (MQ=60)
AAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACA > SRR4302535.930531/1‑94 (MQ=60)
AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT < SRR4302535.3825334/94‑1 (MQ=60)
AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT < SRR4302535.1154556/94‑1 (MQ=60)
CGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC < SRR4302535.1576615/94‑1 (MQ=60)
GCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCA > SRR4302535.3350444/1‑94 (MQ=60)
GCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCA < SRR4302535.3333431/94‑1 (MQ=60)
CACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCAC > SRR4302535.4492864/1‑94 (MQ=60)
ACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACC < SRR4302535.2406452/94‑1 (MQ=60)
ACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACC < SRR4302535.1711233/94‑1 (MQ=60)
CAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC < SRR4302535.4017012/94‑1 (MQ=60)
|
TTGGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC > NC_000913/2947019‑2947205
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
