Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,947,112	T→C	intergenic (‑80/‑152)	b2817 ← / → argA	putative amidase/N‑acetylglutamate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,947,112	0	T	C	100.0%	1235.0 / NA	386	intergenic (‑80/‑152)	b2817/argA	putative amidase/N‑acetylglutamate synthase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (168/218); total (168/218)

Only 100 of 388 total aligned reads displayed.

GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201

gATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACaa                                                                                         >  1:7391578/1‑93 (MQ=255)

  tCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc                                                                                       <  2:4656234/93‑1 (MQ=255)

  tCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc                                                                                       <  2:3441909/93‑1 (MQ=255)

  tCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATc                                                                                       <  2:1328466/93‑1 (MQ=255)

           gCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCta                                                                              <  1:1138598/93‑1 (MQ=255)

           gCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCta                                                                              <  2:4262052/93‑1 (MQ=255)

            ccTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCTGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             >  2:7886987/1‑93 (MQ=255)

            ccTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             <  1:1664530/93‑1 (MQ=255)

            ccTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             <  1:2168819/93‑1 (MQ=255)

            ccTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             <  1:7491644/93‑1 (MQ=255)

            ccTCGCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaa                                                                             <  1:1045675/93‑1 (MQ=255)

             ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat                                                                            >  2:3043684/1‑93 (MQ=255)

             ctctCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaat                                                                            >  2:1735446/1‑93 (MQ=255)

              tctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaata                                                                           <  2:7171503/93‑1 (MQ=255)

              tctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaata                                                                           <  1:5836386/93‑1 (MQ=255)

               ctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaataa                                                                          <  2:902708/93‑1 (MQ=255)

               ctcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCtaataa                                                                          <  1:2507787/93‑1 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTCAACGACTAATTTGACCGGAAACTTTATCGAAAGACGAACAATCTGTCATCtaataca                                                                         >  1:7668495/1‑91 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         >  2:2426130/1‑93 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         <  2:222678/93‑1 (MQ=255)

                tcCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATATGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATaaa                                                                         >  2:3308165/1‑93 (MQ=255)

                  ccGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATACACg                                                                       >  1:3388050/1‑93 (MQ=255)

                    gAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACgga                                                                     >  2:6317354/1‑92 (MQ=255)

                      gCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaa                                                                   >  1:1869425/1‑93 (MQ=255)

                      gCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaa                                                                   >  2:1351914/1‑93 (MQ=255)

                      gCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaa                                                                   <  2:1484524/93‑1 (MQ=255)

                       cAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaaa                                                                  <  1:3165329/93‑1 (MQ=255)

                       cAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTaaa                                                                  <  1:611597/93‑1 (MQ=255)

                         aaaGAAATCTAAGTTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACa                                                                <  1:4816910/93‑1 (MQ=255)

                          aaGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAt                                                               >  2:3924375/1‑93 (MQ=255)

                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              >  2:556421/1‑93 (MQ=255)

                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              <  2:2828455/93‑1 (MQ=255)

                           aGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAtt                                                              >  2:4961237/1‑93 (MQ=255)

                            gAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTc                                                             <  1:7211668/93‑1 (MQ=255)

                            gAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTc                                                             <  2:6026038/93‑1 (MQ=255)

                              aaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtt                                                           <  1:468802/93‑1 (MQ=255)

                              aaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtt                                                           <  2:477823/93‑1 (MQ=255)

                              aaTCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCtt                                                           <  1:2814790/93‑1 (MQ=255)

                                 cTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttttt                                                        >  2:2500513/1‑93 (MQ=255)

                                 cTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttttt                                                        >  1:4627679/1‑93 (MQ=255)

                                 cTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCttttt                                                        <  1:6642651/93‑1 (MQ=255)

                                  tAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTta                                                       >  1:6242478/1‑93 (MQ=255)

                                  tAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTta                                                       <  1:1799524/93‑1 (MQ=255)

                                   aaGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtat                                                      <  1:5326854/93‑1 (MQ=255)

                                   aaGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCAAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtaa                                                      <  2:263415/93‑2 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     <  1:350920/93‑1 (MQ=255)

                                    aGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTtata                                                     <  2:6094925/93‑1 (MQ=255)

                                     gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat                                                    >  1:6737715/1‑93 (MQ=255)

                                     gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat                                                    >  1:5770560/1‑93 (MQ=255)

                                     gCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTatat                                                    <  1:3064167/93‑1 (MQ=255)

                                       tgtgTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTc                                                  <  2:649222/93‑1 (MQ=255)

                                       tgtgTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTc                                                  >  2:3956707/1‑93 (MQ=255)

                                        gtgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCa                                                 <  2:7669589/93‑1 (MQ=255)

                                        gtgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCa                                                 <  1:7039070/93‑1 (MQ=255)

                                        gtgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCa                                                 <  2:2965049/93‑1 (MQ=255)

                                        gtgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCa                                                 <  1:4048329/93‑1 (MQ=255)

                                         tgtAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTAATCTAATAAACGGTAAACATTCTTTTTATATTCAc                                                <  1:2602083/93‑1 (MQ=255)

                                           tAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACgg                                              <  1:2978812/93‑1 (MQ=255)

                                           tAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACgg                                              <  2:4068263/93‑1 (MQ=255)

                                            aaCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGc                                             <  2:3994252/93‑1 (MQ=255)

                                             aCAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAAATTCTTTTTATATTCACGGCa                                            <  1:1413777/93‑1 (MQ=255)

                                               aaGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAtt                                          >  2:1630035/1‑93 (MQ=255)

                                               aaGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAtt                                          >  2:4191628/1‑93 (MQ=255)

                                               aaGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCAtt                                          >  2:5852683/1‑93 (MQ=255)

                                                aGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTa                                         <  2:1175498/93‑1 (MQ=255)

                                                aGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTa                                         >  2:7542678/1‑93 (MQ=255)

                                                 gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAACCGGTAAACATTCTTTTTATATTCACGGCATTAc                                        <  1:954356/93‑1 (MQ=255)

                                                 gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAc                                        >  1:1467445/1‑93 (MQ=255)

                                                 gTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAc                                        <  1:4475698/93‑1 (MQ=255)

                                                  tAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACt                                       <  2:3738459/93‑1 (MQ=255)

                                                    aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa                                     <  1:1940124/93‑1 (MQ=255)

                                                    aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa                                     <  2:3563628/93‑1 (MQ=255)

                                                    aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa                                     <  2:1908622/93‑1 (MQ=255)

                                                    aaCGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGa                                     <  1:68098/93‑1 (MQ=255)

                                                       gACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaa                                  <  2:5462228/93‑1 (MQ=255)

                                                        aCTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaa                                 <  2:3184002/93‑1 (MQ=255)

                                                        aCTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATaaa                                 >  1:5895448/1‑93 (MQ=255)

                                                             tttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGt                            <  1:3857790/93‑1 (MQ=255)

                                                              ttGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTc                           <  1:1082176/93‑1 (MQ=255)

                                                                 aCCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGct                        >  2:52037/1‑93 (MQ=255)

                                                                  ccGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctc                       <  2:3590247/93‑1 (MQ=255)

                                                                  ccGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGctc                       >  2:2366345/1‑93 (MQ=255)

                                                                    ggAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCtctc                     <  1:6967285/93‑1 (MQ=255)

                                                                     gAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCg                    >  1:5475853/1‑93 (MQ=255)

                                                                     gAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCg                    >  2:4997216/1‑93 (MQ=255)

                                                                     gAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCg                    >  1:2875704/1‑93 (MQ=255)

                                                                       aaCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCa                  >  1:811911/1‑93 (MQ=255)

                                                                        aCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTATTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAt                 <  2:4583972/93‑1 (MQ=255)

                                                                         cTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATa                >  2:6392233/1‑93 (MQ=255)

                                                                          tttAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATaa               <  1:4138336/93‑1 (MQ=255)

                                                                             aGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAt            >  2:202442/1‑93 (MQ=255)

                                                                             aGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAt            >  1:7806908/1‑93 (MQ=255)

                                                                             aGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAt            <  2:6885191/93‑1 (MQ=255)

                                                                                gAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTa         >  2:533080/1‑93 (MQ=255)

                                                                                gAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTa         >  2:5097500/1‑93 (MQ=255)

                                                                                gAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTa         >  1:3590692/1‑93 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       <  2:323592/93‑1 (MQ=255)

                                                                                  aaGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTaca       >  1:4975632/1‑93 (MQ=255)

                                                                                    gACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACt     >  1:5116453/1‑93 (MQ=255)

                                                                                       gCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGc  <  1:171662/93‑1 (MQ=255)

GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC  >  NC_000913/2947022‑2947201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  >  NC_000913/2947021‑2947205

GGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAA                                                                                             >  SRR4302543.7462578/1‑94 (MQ=60)

 GATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAAT                                                                                            <  SRR4302543.1700403/94‑1 (MQ=60)

  ATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATC                                                                                           <  SRR4302543.5115805/94‑1 (MQ=60)

   TCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCT                                                                                          >  SRR4302543.7582522/1‑94 (MQ=60)

   TCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCT                                                                                          <  SRR4302543.4913736/94‑1 (MQ=60)

    CCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTG                                                                                         <  SRR4302543.7431582/94‑1 (MQ=60)

    CCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTG                                                                                         <  SRR4302543.2852346/94‑1 (MQ=60)

    CCTGACATGCCTCTCCCGAGAAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTG                                                                                         <  SRR4302543.3784923/94‑1 (MQ=60)

     CTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGT                                                                                        <  SRR4302543.3496242/94‑1 (MQ=60)

     CTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGT                                                                                        >  SRR4302543.1937695/1‑94 (MQ=60)

      TGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTC                                                                                       <  SRR4302543.6839046/94‑1 (MQ=60)

      TGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTC                                                                                       <  SRR4302543.7270898/94‑1 (MQ=60)

        ACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCAT                                                                                     >  SRR4302543.1711705/1‑94 (MQ=60)

         CATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATC                                                                                    <  SRR4302543.6814378/94‑1 (MQ=60)

         CATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATC                                                                                    >  SRR4302543.1320339/1‑94 (MQ=60)

         CATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATC                                                                                    >  SRR4302543.5129312/1‑94 (MQ=60)

          ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   >  SRR4302543.6709252/1‑94 (MQ=60)

          ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   <  SRR4302543.1615332/94‑1 (MQ=60)

          ATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCT                                                                                   <  SRR4302543.4266114/94‑1 (MQ=60)

            GCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAA                                                                                 <  SRR4302543.1148966/94‑1 (MQ=60)

            GCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAA                                                                                 <  SRR4302543.113940/94‑1 (MQ=60)

             CCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAAT                                                                                <  SRR4302543.1679441/94‑1 (MQ=60)

             CCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAAT                                                                                <  SRR4302543.2188253/94‑1 (MQ=60)

             CCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAAT                                                                                >  SRR4302543.6212688/1‑94 (MQ=60)

             CCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAAT                                                                                <  SRR4302543.7563320/94‑1 (MQ=60)

             CCTCGCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAAT                                                                                <  SRR4302543.1055025/94‑1 (MQ=60)

              CTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATA                                                                               <  SRR4302543.4656524/94‑1 (MQ=60)

               TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302543.2774460/94‑1 (MQ=60)

               TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302543.5889471/94‑1 (MQ=60)

               TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302543.5889472/94‑1 (MQ=60)

               TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              >  SRR4302543.3829326/1‑94 (MQ=60)

               TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              <  SRR4302543.1146787/94‑1 (MQ=60)

               TCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAA                                                                              >  SRR4302543.2434630/1‑94 (MQ=60)

                CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTCAACGACTAATTTGACCGGAAACTTTATCGAAAGACGAACAATCTGTCATCTAATACA                                                                             >  SRR4302543.7741167/1‑94 (MQ=60)

                CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             >  SRR4302543.3109903/1‑94 (MQ=60)

                CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             >  SRR4302543.2616451/1‑94 (MQ=60)

                CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             <  SRR4302543.2530558/94‑1 (MQ=60)

                CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             >  SRR4302543.7741166/1‑94 (MQ=60)

                CTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             >  SRR4302543.1601867/1‑94 (MQ=60)

                CCCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGTCTAATTTGTCCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAA                                                                             <  SRR4302543.2709781/94‑1 (MQ=60)

                 TCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAAC                                                                            >  SRR4302543.1836383/1‑94 (MQ=60)

                  CCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATACACG                                                                           >  SRR4302543.3418425/1‑94 (MQ=60)

                  CCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACG                                                                           >  SRR4302543.3418426/1‑94 (MQ=60)

                  CCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACG                                                                           <  SRR4302543.594017/94‑1 (MQ=60)

                   CCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGG                                                                          >  SRR4302543.2759075/1‑94 (MQ=60)

                    CGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGT                                                                         <  SRR4302543.2259434/94‑1 (MQ=60)

                     GAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTA                                                                        <  SRR4302543.5859466/94‑1 (MQ=60)

                      AGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAA                                                                       <  SRR4302543.7897619/94‑1 (MQ=60)

                      AGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAA                                                                       <  SRR4302543.6089489/94‑1 (MQ=60)

                      AGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAA                                                                       >  SRR4302543.1886218/1‑94 (MQ=60)

                      AGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAA                                                                       >  SRR4302543.5610023/1‑94 (MQ=60)

                       GCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAA                                                                      <  SRR4302543.1435628/94‑1 (MQ=60)

                       GCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAA                                                                      >  SRR4302543.3385035/1‑94 (MQ=60)

                       GCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAA                                                                      <  SRR4302543.4302161/94‑1 (MQ=60)

                        CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     <  SRR4302543.1710424/94‑1 (MQ=60)

                        CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     <  SRR4302543.3193827/94‑1 (MQ=60)

                        CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     <  SRR4302543.617185/94‑1 (MQ=60)

                        CAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAC                                                                     >  SRR4302543.6045238/1‑94 (MQ=60)

                         AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    >  SRR4302543.981525/1‑94 (MQ=60)

                         AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    >  SRR4302543.677880/1‑94 (MQ=60)

                         AAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    >  SRR4302543.1063878/1‑94 (MQ=60)

                         AAAAGAAATCTAAGCTGTGTAACAAGAAAACGACTAATTTGACCGGCAACTTTAGCGAACGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    >  SRR4302543.469846/1‑94 (MQ=60)

                         AAAAGAAATCTAAGCGGTGTATCAAGTAAACGACTAATTTGACCGGAAACTTCAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACA                                                                    <  SRR4302543.1881083/94‑1 (MQ=60)

                          AAAGAAATCTAAGTTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAT                                                                   <  SRR4302543.4860899/94‑1 (MQ=60)

                          AAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAT                                                                   <  SRR4302543.5878367/94‑1 (MQ=60)

                          AAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACAT                                                                   <  SRR4302543.4138178/94‑1 (MQ=60)

                            AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACTATCTGTCATCTAATAAACGGTAAACATTC                                                                 >  SRR4302543.7090495/1‑94 (MQ=60)

                            AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC                                                                 <  SRR4302543.1782827/94‑1 (MQ=60)

                            AGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTC                                                                 >  SRR4302543.3619038/1‑94 (MQ=60)

                             GAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCT                                                                <  SRR4302543.4693615/94‑1 (MQ=60)

                             GAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCT                                                                <  SRR4302543.7281575/94‑1 (MQ=60)

                               nnncnannnngtntaannagnnnnnnACTAANTTGANCGGNAACTTTNGNGNAANACGCACAATNTGTCNTCTAATAAACGGTAAACATTCTTT                                                              <  SRR4302543.5981039/68‑1 (MQ=60)

                               AATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTT                                                              <  SRR4302543.2840570/94‑1 (MQ=60)

                               AATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTT                                                              <  SRR4302543.473160/94‑1 (MQ=60)

                               AATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTT                                                              <  SRR4302543.3017389/94‑1 (MQ=60)

                                ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             <  SRR4302543.4038915/94‑1 (MQ=60)

                                ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             >  SRR4302543.39422/1‑94 (MQ=60)

                                ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             >  SRR4302543.1954592/1‑94 (MQ=60)

                                ATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTT                                                             <  SRR4302543.2887365/94‑1 (MQ=60)

                                 TCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTT                                                            >  SRR4302543.4669733/1‑94 (MQ=60)

                                  CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           >  SRR4302543.1805963/1‑94 (MQ=60)

                                  CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           >  SRR4302543.7823515/1‑94 (MQ=60)

                                  CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           >  SRR4302543.6301372/1‑94 (MQ=60)

                                  CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           <  SRR4302543.5511411/94‑1 (MQ=60)

                                  CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           >  SRR4302543.5953422/1‑94 (MQ=60)

                                  CTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTA                                                           <  SRR4302543.6705336/94‑1 (MQ=60)

                                   TAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTAT                                                          <  SRR4302543.1815639/94‑1 (MQ=60)

                                   TAAGCTGTGTAACAAGTAAACGACTAATTTGACAGGAAACTTTAGCGAAAGCCGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTAT                                                          <  SRR4302543.3137570/94‑1 (MQ=60)

                                    AAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATA                                                         <  SRR4302543.5375020/94‑1 (MQ=60)

                                     AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        >  SRR4302543.7081707/1‑94 (MQ=60)

                                     AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        <  SRR4302543.5278869/94‑1 (MQ=60)

                                     AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        >  SRR4302543.5823106/1‑94 (MQ=60)

                                     AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        <  SRR4302543.354165/94‑1 (MQ=60)

                                     AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        >  SRR4302543.6801352/1‑94 (MQ=60)

                                     AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        <  SRR4302543.6770072/94‑1 (MQ=60)

                                     AGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATAT                                                        <  SRR4302543.2480305/94‑1 (MQ=60)

                                      GCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATT                                                       <  SRR4302543.3091728/94‑1 (MQ=60)

                                        TGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCA                                                     <  SRR4302543.4939485/94‑1 (MQ=60)

                                        TGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCA                                                     >  SRR4302543.7502842/1‑94 (MQ=60)

                                         GTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAC                                                    <  SRR4302543.7549859/94‑1 (MQ=60)

                                         GTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAC                                                    <  SRR4302543.5399596/94‑1 (MQ=60)

                                         GTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAC                                                    <  SRR4302543.4084557/94‑1 (MQ=60)

                                         GTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCAC                                                    <  SRR4302543.7106968/94‑1 (MQ=60)

                                          TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG                                                   >  SRR4302543.776886/1‑94 (MQ=60)

                                          TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG                                                   >  SRR4302543.4649765/1‑94 (MQ=60)

                                          TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACG                                                   <  SRR4302543.3453397/94‑1 (MQ=60)

                                          TGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTAATCTAATAAACGGTAAACATTCTTTTTATATTCACG                                                   <  SRR4302543.2625714/94‑1 (MQ=60)

                                           GTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGG                                                  <  SRR4302543.5075740/94‑1 (MQ=60)

                                            TAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGC                                                 <  SRR4302543.3005858/94‑1 (MQ=60)

                                             AACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCA                                                <  SRR4302543.5655532/94‑1 (MQ=60)

                                             AACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCA                                                <  SRR4302543.3824344/94‑1 (MQ=60)

                                              ACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAAAATTCTTTTTATATTCACGGCAT                                               <  SRR4302543.1426570/94‑1 (MQ=60)

                                               CAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATT                                              <  SRR4302543.7893874/94‑1 (MQ=60)

                                               CAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATT                                              >  SRR4302543.367/1‑94 (MQ=60)

                                                 AGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTAC                                            >  SRR4302543.1480664/1‑94 (MQ=60)

                                                  GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAACCGGTAAACATTCTTTTTATATTCACGGCATTACT                                           <  SRR4302543.962723/94‑1 (MQ=60)

                                                  GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACT                                           <  SRR4302543.4516321/94‑1 (MQ=60)

                                                  GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACT                                           >  SRR4302543.4545143/1‑94 (MQ=60)

                                                  GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACT                                           <  SRR4302543.1884485/94‑1 (MQ=60)

                                                  GTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACT                                           >  SRR4302543.2867832/1‑94 (MQ=60)

                                                   TAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTG                                          <  SRR4302543.2556290/94‑1 (MQ=60)

                                                    AAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGA                                         >  SRR4302543.7315774/1‑94 (MQ=60)

                                                     AACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGAT                                        <  SRR4302543.1957555/94‑1 (MQ=60)

                                                     AACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGAT                                        <  SRR4302543.68708/94‑1 (MQ=60)

                                                      ACGACTAATTTGACCGGAAGCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATA                                       <  SRR4302543.4150930/94‑1 (MQ=60)

                                                      ACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATA                                       <  SRR4302543.2137160/94‑1 (MQ=60)

                                                        GACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAA                                     <  SRR4302543.913977/94‑1 (MQ=60)

                                                        GACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAA                                     <  SRR4302543.1243557/94‑1 (MQ=60)

                                                        GACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAA                                     >  SRR4302543.6199643/1‑94 (MQ=60)

                                                        GACTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAA                                     >  SRR4302543.5949213/1‑94 (MQ=60)

                                                          CTAATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAA                                   >  SRR4302543.4016070/1‑94 (MQ=60)

                                                            AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG                                 >  SRR4302543.1743686/1‑94 (MQ=60)

                                                            AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG                                 <  SRR4302543.4970412/94‑1 (MQ=60)

                                                            AATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAG                                 >  SRR4302543.2909501/1‑94 (MQ=60)

                                                             ATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGT                                >  SRR4302543.7536842/1‑94 (MQ=60)

                                                             ATTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGT                                >  SRR4302543.1056684/1‑94 (MQ=60)

                                                              TTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTC                               <  SRR4302543.3891871/94‑1 (MQ=60)

                                                              TTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTC                               >  SRR4302543.7665993/1‑94 (MQ=60)

                                                              TTTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTC                               <  SRR4302543.5164679/94‑1 (MQ=60)

                                                               TTGACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCG                              <  SRR4302543.1091903/94‑1 (MQ=60)

                                                                 GACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCT                            <  SRR4302543.838516/94‑1 (MQ=60)

                                                                 GACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCT                            >  SRR4302543.7803190/1‑94 (MQ=60)

                                                                  ACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTC                           <  SRR4302543.800493/94‑1 (MQ=60)

                                                                  ACCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTC                           <  SRR4302543.1114645/94‑1 (MQ=60)

                                                                   CCGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCT                          <  SRR4302543.2955781/94‑1 (MQ=60)

                                                                    CGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTC                         <  SRR4302543.3060167/94‑1 (MQ=60)

                                                                    CGGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTC                         <  SRR4302543.6511217/94‑1 (MQ=60)

                                                                    CGGAAACTTTAGCGAAAGACGCACAATCAGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTC                         <  SRR4302543.7114907/94‑1 (MQ=60)

                                                                     GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        >  SRR4302543.5525474/1‑94 (MQ=60)

                                                                     GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        >  SRR4302543.3360670/1‑94 (MQ=60)

                                                                     GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        <  SRR4302543.7032850/94‑1 (MQ=60)

                                                                     GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        >  SRR4302543.2901879/1‑94 (MQ=60)

                                                                     GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        >  SRR4302543.5327639/1‑94 (MQ=60)

                                                                     GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        >  SRR4302543.4153817/1‑94 (MQ=60)

                                                                     GGAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCG                        <  SRR4302543.6837676/94‑1 (MQ=60)

                                                                      GAAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGC                       >  SRR4302543.913651/1‑94 (MQ=60)

                                                                       AAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCA                      >  SRR4302543.1462987/1‑94 (MQ=60)

                                                                       AAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCA                      >  SRR4302543.819061/1‑94 (MQ=60)

                                                                       AAACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCA                      >  SRR4302543.1281225/1‑94 (MQ=60)

                                                                        ATCTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAT                     <  SRR4302543.7004179/94‑1 (MQ=60)

                                                                        AACTTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCAT                     <  SRR4302543.7004178/94‑1 (MQ=60)

                                                                           TTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAA                  <  SRR4302543.4175699/94‑1 (MQ=60)

                                                                           TTTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAA                  <  SRR4302543.4175698/94‑1 (MQ=60)

                                                                            TTAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAA                 >  SRR4302543.591006/1‑94 (MQ=60)

                                                                             TAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAT                >  SRR4302543.7880500/1‑94 (MQ=60)

                                                                             TAGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAAT                >  SRR4302543.5449927/1‑94 (MQ=60)

                                                                              AGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATT               >  SRR4302543.4808329/1‑94 (MQ=60)

                                                                              AGCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATT               <  SRR4302543.2054331/94‑1 (MQ=60)

                                                                               GCGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTT              >  SRR4302543.6192403/1‑94 (MQ=60)

                                                                                CGAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTA             >  SRR4302543.3622391/1‑94 (MQ=60)

                                                                                 GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            >  SRR4302543.2594928/1‑94 (MQ=60)

                                                                                 GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            >  SRR4302543.3041106/1‑94 (MQ=60)

                                                                                 GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            <  SRR4302543.4845254/94‑1 (MQ=60)

                                                                                 GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            <  SRR4302543.4845256/94‑1 (MQ=60)

                                                                                 GAAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTAC            <  SRR4302543.66614/94‑1 (MQ=60)

                                                                                  AAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACA           >  SRR4302543.1999200/1‑94 (MQ=60)

                                                                                  AAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACA           >  SRR4302543.5020923/1‑94 (MQ=60)

                                                                                  AAAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACA           >  SRR4302543.2926484/1‑94 (MQ=60)

                                                                                  AAAGACGCACAATCTGTCATCTAATAAACGGAAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACA           >  SRR4302543.321891/1‑94 (MQ=60)

                                                                                   AAGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACAC          <  SRR4302543.5588873/94‑1 (MQ=60)

                                                                                    AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302543.2825208/1‑94 (MQ=60)

                                                                                    AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302543.1446369/1‑94 (MQ=60)

                                                                                    AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302543.1549258/1‑94 (MQ=60)

                                                                                    AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         >  SRR4302543.5162737/1‑94 (MQ=60)

                                                                                    AGACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACT         <  SRR4302543.3594842/94‑1 (MQ=60)

                                                                                      ACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTG       >  SRR4302543.7097469/1‑94 (MQ=60)

                                                                                      ACGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAATCGCTCTCGCATAAAATTTACACTTG       >  SRR4302543.6990158/1‑94 (MQ=60)

                                                                                       CGCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGC      >  SRR4302543.6501750/1‑94 (MQ=60)

                                                                                        GCACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCA     <  SRR4302543.173129/94‑1 (MQ=60)

                                                                                         CACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCAC    >  SRR4302543.1226548/1‑94 (MQ=60)

                                                                                         CACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCAC    <  SRR4302543.7879610/94‑1 (MQ=60)

                                                                                         CACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCAC    >  SRR4302543.1951545/1‑94 (MQ=60)

                                                                                         CACAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCAC    <  SRR4302543.5221698/94‑1 (MQ=60)

                                                                                           CAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  >  SRR4302543.2304220/1‑94 (MQ=60)

                                                                                           CAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  <  SRR4302543.7539067/94‑1 (MQ=60)

GGATCCTGACATGCCTCTCCCGAGCAAAAGAAATCTAAGCTGTGTAACAAGTAAACGACTAATTTGACCGGAAACTTTAGCGAAAGACGCATAATCTGTCATCTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCC  >  NC_000913/2947021‑2947205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`