Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,958,357 |
G→A |
S698S (AGC→AGT) |
recC ← |
RecC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,958,357 | 0 | G | A | 100.0%
| 557.2
/ NA
| 158 | S698S (AGC→AGT) | recC | RecC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (88/70); total (88/70) |
Only 100 of 164 total aligned reads displayed.
ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA > NC_000913/2958267‑2958446
|
ataGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACt < 2:1744130/93‑1 (MQ=255)
ataGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACt > 1:3612224/1‑93 (MQ=255)
taGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGTACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTGCTGACtc > 1:595586/1‑93 (MQ=255)
taGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtc < 2:486757/93‑1 (MQ=255)
gagTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcat > 2:322603/1‑93 (MQ=255)
gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca < 2:1494975/93‑1 (MQ=255)
gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca > 2:2043965/1‑93 (MQ=255)
gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca > 1:4153742/1‑93 (MQ=255)
gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca > 2:4247077/1‑93 (MQ=255)
gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca > 2:3712938/1‑93 (MQ=255)
tttttGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAg > 2:1719975/1‑93 (MQ=255)
ttGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTAGTCCTCGCGACTGCTACGGACGACACGCTTCGGTTTCTGGATCATCgggcc > 2:2007607/1‑91 (MQ=255)
tgctgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCa > 1:670215/1‑93 (MQ=255)
ctgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCaaa < 1:3292481/93‑1 (MQ=255)
tgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAg > 1:4052687/1‑93 (MQ=255)
cgcgGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGcc > 1:2563848/1‑93 (MQ=255)
gcgGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGccc < 2:3286172/93‑1 (MQ=255)
cgGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGACAAAGCCCa > 1:1938946/1‑93 (MQ=255)
ggAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCaa < 1:3809574/93‑1 (MQ=255)
gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt > 1:1227796/1‑93 (MQ=255)
gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt < 2:2805175/93‑1 (MQ=255)
aaTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATgg < 2:2145665/93‑1 (MQ=255)
aTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgc > 1:101419/1‑93 (MQ=255)
ttAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgcg < 2:3148504/93‑1 (MQ=255)
aaCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCa > 1:165040/1‑93 (MQ=255)
aCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCaa < 2:1230758/93‑1 (MQ=255)
aCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCaa < 1:624796/93‑1 (MQ=255)
aCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCaa > 2:348439/1‑93 (MQ=255)
gCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGc > 2:730776/1‑93 (MQ=255)
gCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGc > 2:3530115/1‑93 (MQ=255)
gCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGc < 2:1626273/93‑1 (MQ=255)
cTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCt < 2:4373510/93‑1 (MQ=255)
aGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGt < 1:3243783/93‑1 (MQ=255)
ggAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg > 2:1044002/1‑93 (MQ=255)
ggAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg > 2:3896982/1‑93 (MQ=255)
ggAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg > 2:1549776/1‑93 (MQ=255)
ggAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg > 1:540532/1‑93 (MQ=255)
aaCAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGa < 1:2096586/93‑1 (MQ=255)
aCAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAt > 2:4053686/1‑93 (MQ=255)
aCAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAt > 1:1311018/1‑93 (MQ=255)
aCAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAt > 2:2454869/1‑93 (MQ=255)
cAGATAGCGTTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATa < 2:1863460/93‑1 (MQ=255)
cAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATa > 1:763170/1‑93 (MQ=255)
aGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaa > 2:2253132/1‑93 (MQ=255)
aGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaa > 2:3178722/1‑93 (MQ=255)
aGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGACCAATGGCGCAAGCTGAAGTGGATaa > 2:2152048/1‑93 (MQ=255)
gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa > 1:800261/1‑93 (MQ=255)
gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa > 1:3489607/1‑93 (MQ=255)
gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa > 1:3939559/1‑93 (MQ=255)
gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa > 2:3377365/1‑93 (MQ=255)
gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAACAGGTCAAAGGCCAATGGCGCAAGCTGACGTGGATaaa > 1:1724958/1‑93 (MQ=255)
tAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACg < 2:2865583/93‑1 (MQ=255)
aGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGc < 1:3760051/93‑1 (MQ=255)
gCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGcc < 1:4342917/93‑1 (MQ=255)
cGGTCGTCATCGCGACGTCTACGGTCGCCACGCCTCGGTTTCTGACTCATGAGATCAAAGCCCAATGGCGCTAGCTGAGGTGGATAGACGCcg > 2:2892108/1‑93 (MQ=255)
cGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcg < 1:3895234/93‑1 (MQ=255)
ggTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgt < 2:1053486/93‑1 (MQ=255)
ggTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgt < 2:2050789/93‑1 (MQ=255)
gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc > 2:910576/1‑93 (MQ=255)
gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc > 1:1683265/1‑93 (MQ=255)
gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc > 1:2097088/1‑93 (MQ=255)
gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc > 1:2306174/1‑93 (MQ=255)
tcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtcg > 1:1262069/1‑93 (MQ=255)
gtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGtt < 2:1300590/93‑1 (MQ=255)
gtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGtt > 1:3001408/1‑93 (MQ=255)
tcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTc > 1:1054227/1‑93 (MQ=255)
aTCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTCCAt > 1:4486045/1‑93 (MQ=255)
tCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAtt < 2:1509906/93‑1 (MQ=255)
cgcgACGTCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTc < 2:3093000/93‑1 (MQ=255)
cgcgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTc < 2:2818286/93‑1 (MQ=255)
gcgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTcc < 2:3957652/93‑1 (MQ=255)
aCGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCcag < 1:2463164/93‑1 (MQ=255)
tACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGc > 2:2099917/1‑93 (MQ=255)
tACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGc < 2:2615027/93‑1 (MQ=255)
aCGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCa < 1:1184418/93‑1 (MQ=255)
aCGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCa > 1:2075780/1‑93 (MQ=255)
ggTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCaaa < 1:3978136/93‑1 (MQ=255)
ggTCGCCACGCTTCGGTTTCTGACTCATCAAGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCaaa > 1:1792523/1‑93 (MQ=255)
tCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAcc < 1:3510610/93‑1 (MQ=255)
ccACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACt > 1:2966372/1‑93 (MQ=255)
cACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACtt > 1:3197385/1‑93 (MQ=255)
cACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACtt > 1:1217918/1‑93 (MQ=255)
cACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACtt < 2:1990738/93‑1 (MQ=255)
cACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACtt > 1:1651447/1‑93 (MQ=255)
gCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGa < 2:808147/93‑1 (MQ=255)
gCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGa < 2:1260929/93‑1 (MQ=255)
gCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTCGa > 1:4614690/1‑93 (MQ=255)
ccTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGa < 2:2702219/92‑1 (MQ=255)
ttCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAc < 2:3306886/93‑1 (MQ=255)
tCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACg < 1:4488368/93‑1 (MQ=255)
tCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACg < 2:2660225/93‑1 (MQ=255)
gTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGaa < 2:4061326/93‑1 (MQ=255)
gTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGaa < 2:2449414/93‑1 (MQ=255)
tttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAt > 2:1158384/1‑93 (MQ=255)
tttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAt < 1:2689047/93‑1 (MQ=255)
tttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAt < 2:2671596/93‑1 (MQ=255)
tttCTGACTCATCAGGTCAAAGACCAATGGCGCAAGCTGACGCGGATAAACGCCGTCGTTGCCTCCCAGTAGGCAAACCACCTTCAACgcact > 2:4415192/1‑89 (MQ=255)
ttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAtt < 2:1272403/93‑1 (MQ=255)
ttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAtt < 1:1921940/93‑1 (MQ=255)
ttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAtt < 1:1509503/93‑1 (MQ=255)
|
ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA > NC_000913/2958267‑2958446
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACGC > NC_000913/2958264‑2958450
|
GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGA > SRR4302535.4654687/1‑94 (MQ=60)
ATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGAC > SRR4302535.4689485/1‑94 (MQ=60)
ATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGGTTCTGAC > SRR4302535.1248048/1‑94 (MQ=60)
TATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACT > SRR4302535.4029430/1‑94 (MQ=60)
TATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACT < SRR4302535.1842450/94‑1 (MQ=60)
TATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACT > SRR4302535.3637272/1‑94 (MQ=60)
ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGTACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTGCTGACTC > SRR4302535.599761/1‑94 (MQ=60)
AGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAT > SRR4302535.4506284/1‑94 (MQ=60)
GAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATC < SRR4302535.601478/94‑1 (MQ=60)
AGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCA > SRR4302535.4182182/1‑94 (MQ=60)
TTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCA > SRR4302535.674892/1‑94 (MQ=60)
CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG < SRR4302535.3315373/94‑1 (MQ=60)
CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG > SRR4302535.4080436/1‑94 (MQ=60)
GCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCC > SRR4302535.2582302/1‑94 (MQ=60)
GCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCA > SRR4302535.145905/1‑94 (MQ=60)
GCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGACAAAGCCCA > SRR4302535.1952908/1‑94 (MQ=60)
GTAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAT < SRR4302535.1671454/94‑1 (MQ=60)
GGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAT > SRR4302535.1236571/1‑94 (MQ=60)
GGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAT < SRR4302535.1173435/94‑1 (MQ=60)
GGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAT < SRR4302535.3835862/94‑1 (MQ=60)
AAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGG < SRR4302535.2443894/94‑1 (MQ=60)
AATTAACGCTTCCAGGAACAGATAGCGGTCGTCATTGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGC > SRR4302535.3726862/1‑94 (MQ=60)
AATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGC > SRR4302535.102135/1‑94 (MQ=60)
TAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCA > SRR4302535.166192/1‑94 (MQ=60)
ACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAG < SRR4302535.629142/94‑1 (MQ=60)
GCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCT > SRR4302535.955292/1‑94 (MQ=60)
CAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGT > SRR4302535.1935635/1‑94 (MQ=60)
AGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTG > SRR4302535.2100987/1‑94 (MQ=60)
AGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTG < SRR4302535.3266316/94‑1 (MQ=60)
AGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTG > SRR4302535.544305/1‑94 (MQ=60)
AGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTG > SRR4302535.3607042/1‑94 (MQ=60)
GGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGG > SRR4302535.3876786/1‑94 (MQ=60)
AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAT < SRR4302535.2111705/94‑1 (MQ=60)
AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAT > SRR4302535.1320388/1‑94 (MQ=60)
ACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATA > SRR4302535.1718910/1‑94 (MQ=60)
ACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATA > SRR4302535.768546/1‑94 (MQ=60)
AGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAA > SRR4302535.3513853/1‑94 (MQ=60)
AGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAA > SRR4302535.805882/1‑94 (MQ=60)
AGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAA > SRR4302535.3966446/1‑94 (MQ=60)
AGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAACAGGTCAAAGGCCAATGGCGCAAGCTGACGTGGATAAA > SRR4302535.1737434/1‑94 (MQ=60)
AGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCC < SRR4302535.3786039/94‑1 (MQ=60)
GCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCG < SRR4302535.4372615/94‑1 (MQ=60)
CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT < SRR4302535.3921930/94‑1 (MQ=60)
GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC > SRR4302535.3211205/1‑94 (MQ=60)
GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC > SRR4302535.2322669/1‑94 (MQ=60)
GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC > SRR4302535.2112210/1‑94 (MQ=60)
GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC > SRR4302535.1695458/1‑94 (MQ=60)
GTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCG > SRR4302535.1271101/1‑94 (MQ=60)
GTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCG < SRR4302535.2701017/94‑1 (MQ=60)
CGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTT > SRR4302535.3022447/1‑94 (MQ=60)
GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC > SRR4302535.1061726/1‑94 (MQ=60)
CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTCCAT > SRR4302535.4516839/1‑94 (MQ=60)
ATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCCTT > SRR4302535.3502506/1‑94 (MQ=60)
ATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATT > SRR4302535.1246907/1‑94 (MQ=60)
GCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCC < SRR4302535.290702/94‑1 (MQ=60)
ACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGC < SRR4302535.2480924/94‑1 (MQ=60)
TACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCA > SRR4302535.2090732/1‑94 (MQ=60)
ACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAA < SRR4302535.1192879/94‑1 (MQ=60)
CGGTCGCCACGCTTCGGTTTCTGACTCATCAAGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAA > SRR4302535.1805482/1‑94 (MQ=60)
GGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAC < SRR4302535.4005317/94‑1 (MQ=60)
GGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAC < SRR4302535.1520610/94‑1 (MQ=60)
TCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCA < SRR4302535.3535002/94‑1 (MQ=60)
GCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACT > SRR4302535.2987183/1‑94 (MQ=60)
GCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACT < SRR4302535.492191/94‑1 (MQ=60)
CCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTT > SRR4302535.3219510/1‑94 (MQ=60)
CCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTT > SRR4302535.1663389/1‑94 (MQ=60)
CCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTT > SRR4302535.1226656/1‑94 (MQ=60)
ACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTG > SRR4302535.786274/1‑94 (MQ=60)
CGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGA > SRR4302535.3931148/1‑94 (MQ=60)
CGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTCGA > SRR4302535.4646044/1‑94 (MQ=60)
GCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAA > SRR4302535.1232281/1‑94 (MQ=60)
CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC < SRR4302535.4158791/94‑1 (MQ=60)
TCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGG < SRR4302535.4519179/94‑1 (MQ=60)
CGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGA > SRR4302535.1999790/1‑94 (MQ=60)
GGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAA < SRR4302535.4567552/94‑1 (MQ=60)
GTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAT > SRR4302535.659002/1‑94 (MQ=60)
TTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATT < SRR4302535.2708265/94‑1 (MQ=60)
TTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTG < SRR4302535.1520377/94‑1 (MQ=60)
TTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTG < SRR4302535.1935794/94‑1 (MQ=60)
TCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA < SRR4302535.3225250/94‑1 (MQ=60)
CTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAA > SRR4302535.3414312/1‑94 (MQ=60)
CTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAA < SRR4302535.2266080/94‑1 (MQ=60)
TGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAAC < SRR4302535.3633760/94‑1 (MQ=60)
GACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACG < SRR4302535.3457617/94‑1 (MQ=60)
ACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACGC > SRR4302535.956709/1‑94 (MQ=60)
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GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACGC > NC_000913/2958264‑2958450
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
