Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,958,357 G→A S698S (AGC→AGT recC ← RecC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,958,3570GA99.7% 1156.0 / ‑5.7 327S698S (AGC→AGTrecCRecC
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base A (164/161);  total (166/161)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.22e-01

Only 100 of 339 total aligned reads displayed.

ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA  >  NC_000913/2958267‑2958446
                                                                                          |                                                                                         
 taGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtc                                                                                        >  2:1420360/1‑93 (MQ=255)
    agTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatc                                                                                     <  1:1097934/93‑1 (MQ=255)
     gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca                                                                                    <  2:1667343/93‑1 (MQ=255)
     gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca                                                                                    <  1:6574451/93‑1 (MQ=255)
      tttttGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAg                                                                                   >  1:2870944/1‑93 (MQ=255)
        tgtgctgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGt                                                                                 <  2:6374264/91‑1 (MQ=255)
         ttGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTc                                                                                >  2:1124619/1‑93 (MQ=255)
            ctgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCaaa                                                                             <  2:3326440/93‑1 (MQ=255)
            ctgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCaaa                                                                             <  1:2586918/93‑1 (MQ=255)
             tgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAg                                                                            >  2:1307653/1‑93 (MQ=255)
             tgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAg                                                                            >  1:5715537/1‑93 (MQ=255)
              gcgcGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGc                                                                           <  1:6297997/93‑1 (MQ=255)
                gcgGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGccc                                                                         <  2:5599466/93‑1 (MQ=255)
                gcgGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGcca                                                                         >  2:1466932/1‑92 (MQ=255)
                  ggAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCaa                                                                       <  1:6231969/93‑1 (MQ=255)
                  ggAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCaa                                                                       >  2:5257328/1‑93 (MQ=255)
                   gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGCCTCATCAGGTCAAAGCCCAAt                                                                      >  1:2196266/1‑93 (MQ=255)
                   gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt                                                                      <  2:1814221/93‑1 (MQ=255)
                   gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt                                                                      >  2:3516524/1‑93 (MQ=255)
                   gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt                                                                      <  2:728525/93‑1 (MQ=255)
                     aaTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATgg                                                                    >  1:3689563/1‑93 (MQ=255)
                     aaTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATgg                                                                    <  2:2486720/93‑1 (MQ=255)
                       ttAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgcg                                                                  >  1:270143/1‑93 (MQ=255)
                       ttAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgcg                                                                  >  2:190516/1‑93 (MQ=255)
                       ttAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgcg                                                                  >  1:7391520/1‑93 (MQ=255)
                       ttAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgcg                                                                  >  1:5567783/1‑93 (MQ=255)
                         aaCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTTACTCATCAGGTCAAAGCCCAATGGCGCa                                                                >  1:7903674/1‑93 (MQ=255)
                         aaCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCa                                                                >  1:1833796/1‑93 (MQ=255)
                         aaCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCa                                                                <  2:717703/93‑1 (MQ=255)
                         aaCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCa                                                                <  1:2024658/93‑1 (MQ=255)
                          aCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCaa                                                               >  1:6933572/1‑93 (MQ=255)
                          aCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCaa                                                               <  1:1630034/93‑1 (MQ=255)
                          aCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGATACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCaa                                                               >  2:4517024/1‑93 (MQ=255)
                           cGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAg                                                              >  2:2759328/1‑93 (MQ=255)
                            gCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGc                                                             <  1:5661783/93‑1 (MQ=255)
                             cTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCt                                                            <  1:514799/93‑1 (MQ=255)
                             cTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCt                                                            >  1:6159328/1‑93 (MQ=255)
                              ttCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAACCCAATGGCGCAAGCTg                                                           >  2:1033497/1‑93 (MQ=255)
                               tCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGa                                                          <  1:1721759/93‑1 (MQ=255)
                                ccAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAc                                                         <  1:3333620/93‑1 (MQ=255)
                                ccAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAc                                                         <  1:4190336/93‑1 (MQ=255)
                                 cAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACg                                                        <  2:300231/93‑1 (MQ=255)
                                 cAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACg                                                        <  1:2357718/93‑1 (MQ=255)
                                  aGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACgg                                                       >  2:2247703/1‑92 (MQ=255)
                                   ggAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg                                                      <  2:6245798/93‑1 (MQ=255)
                                   agAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg                                                      <  1:497874/92‑1 (MQ=255)
                                    gAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTgg                                                     <  2:5162344/93‑1 (MQ=255)
                                      aCAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAt                                                   >  2:4007848/1‑93 (MQ=255)
                                       cAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATa                                                  <  2:5025445/93‑1 (MQ=255)
                                         gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa                                                <  1:7514749/93‑1 (MQ=255)
                                           tAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACg                                              >  1:5258453/1‑93 (MQ=255)
                                            aGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGc                                             <  1:5780211/93‑1 (MQ=255)
                                            aGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGc                                             >  2:3435414/1‑93 (MQ=255)
                                              cGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcg                                           <  1:7146063/93‑1 (MQ=255)
                                              cGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcg                                           <  1:4783546/93‑1 (MQ=255)
                                               ggTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgt                                          >  1:7851157/1‑93 (MQ=255)
                                                gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc                                         <  2:7720932/93‑1 (MQ=255)
                                                gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc                                         >  2:6934963/1‑93 (MQ=255)
                                                   gtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGtt                                      >  2:7522614/1‑93 (MQ=255)
                                                   gtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGtt                                      >  1:4066743/1‑93 (MQ=255)
                                                    tcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTc                                     >  1:1386400/1‑93 (MQ=255)
                                                    tcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTc                                     >  1:2474532/1‑93 (MQ=255)
                                                     cATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCa                                    <  1:7733013/93‑1 (MQ=255)
                                                        cgcgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTc                                 <  1:3204691/93‑1 (MQ=255)
                                                        cgcgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTc                                 <  1:4439480/93‑1 (MQ=255)
                                                          cgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTccc                               <  1:7544978/93‑1 (MQ=255)
                                                          cgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTccc                               >  1:5888615/1‑93 (MQ=255)
                                                          cgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTccc                               <  1:1987557/93‑1 (MQ=255)
                                                           gACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCca                              <  2:6636135/93‑1 (MQ=255)
                                                           gACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCca                              <  2:2869813/93‑1 (MQ=255)
                                                              ggCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCcagca                           <  2:3850604/93‑1 (MQ=255)
                                                              ggCTACGGTCGCCACGCTTCGGTTTCTGACGCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCcagca                           <  2:737057/93‑1 (MQ=255)
                                                               gCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCcagcag                          <  2:4579870/93‑1 (MQ=255)
                                                                 tACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTTGTTCATTCCCAGCAGGc                        >  2:6020480/1‑93 (MQ=255)
                                                                 tACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGc                        <  1:6741471/93‑1 (MQ=255)
                                                                    ggTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCaaa                     <  1:154255/93‑1 (MQ=255)
                                                                     gTCGCCCCGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAc                    <  1:2938795/93‑1 (MQ=255)
                                                                      tCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAcc                   >  1:601235/1‑93 (MQ=255)
                                                                      tCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAcc                   >  2:5506226/1‑93 (MQ=255)
                                                                      tCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAcc                   >  1:4673546/1‑93 (MQ=255)
                                                                        gCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCAc                 >  2:3888625/1‑93 (MQ=255)
                                                                           aCGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACttt              <  1:2537508/93‑1 (MQ=255)
                                                                           aCGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACttt              >  2:674142/1‑93 (MQ=255)
                                                                           aCGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACttt              <  2:5895011/93‑1 (MQ=255)
                                                                           aCGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACttt              >  2:698781/1‑93 (MQ=255)
                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCTGATGGCGCAAGCTGACGTAGAAAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             <  2:5771221/93‑1 (MQ=255)
                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             <  1:1205668/93‑1 (MQ=255)
                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             >  2:7801918/1‑93 (MQ=255)
                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             <  2:1693984/93‑1 (MQ=255)
                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             <  1:3496669/93‑1 (MQ=255)
                                                                             gCTTCGGTTTCTGACTCATCAGGGCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTCTGa            >  2:3233786/1‑93 (MQ=255)
                                                                              cTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGaa           <  2:3389221/93‑1 (MQ=255)
                                                                              cTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGaa           >  1:1252627/1‑93 (MQ=255)
                                                                               ttCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAc          >  1:6357179/1‑93 (MQ=255)
                                                                               ttCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAc          >  1:1416266/1‑93 (MQ=255)
                                                                                tCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACg         >  2:2347578/1‑93 (MQ=255)
                                                                                   gTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGaa      >  2:6465561/1‑93 (MQ=255)
                                                                                   gTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGaa      >  2:7934276/1‑93 (MQ=255)
                                                                                    tttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAt     >  2:953195/1‑93 (MQ=255)
                                                                                     ttCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAtt    >  1:7282931/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA  >  NC_000913/2958267‑2958446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACGC  >  NC_000913/2958264‑2958450
                                                                                             |                                                                                             
GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGA                                                                                               >  SRR4302543.7063264/1‑94 (MQ=60)
  TATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACT                                                                                             >  SRR4302543.6354068/1‑94 (MQ=60)
   ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTC                                                                                            >  SRR4302543.1727996/1‑94 (MQ=60)
    tgtAGTTTTTGGTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCA                                                                                           <  SRR4302543.6712137/91‑1 (MQ=60)
     AGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAT                                                                                          >  SRR4302543.6310639/1‑94 (MQ=60)
     AGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAT                                                                                          <  SRR4302543.7865096/94‑1 (MQ=60)
     AGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAT                                                                                          >  SRR4302543.5477549/1‑94 (MQ=60)
     AGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAT                                                                                          <  SRR4302543.5056682/94‑1 (MQ=60)
     AGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAT                                                                                          <  SRR4302543.6712138/94‑1 (MQ=60)
     AGAGTTTTTGCTGCGCGGAAATTAACGCTGCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCAT                                                                                          <  SRR4302543.758091/94‑1 (MQ=60)
       AGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCA                                                                                        <  SRR4302543.1107818/94‑1 (MQ=60)
       AGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCA                                                                                        >  SRR4302543.4669358/1‑94 (MQ=60)
       AGGTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTATGGTCGCCACGCTTCGGTTTCTGACTCATCA                                                                                        <  SRR4302543.1810406/94‑1 (MQ=60)
        GTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAG                                                                                       <  SRR4302543.4969350/94‑1 (MQ=60)
        GTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAG                                                                                       <  SRR4302543.6636352/94‑1 (MQ=60)
        GTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAG                                                                                       >  SRR4302543.2897093/1‑94 (MQ=60)
        GTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAG                                                                                       <  SRR4302543.3084395/94‑1 (MQ=60)
        GTTTTTGATGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGATTCTGAATCATCAG                                                                                       >  SRR4302543.5722659/1‑94 (MQ=60)
          TTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGT                                                                                     <  SRR4302543.2273631/94‑1 (MQ=60)
           TTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTC                                                                                    <  SRR4302543.1439783/94‑1 (MQ=60)
              GCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAA                                                                                 >  SRR4302543.6739218/1‑94 (MQ=60)
               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                                >  SRR4302543.4615659/1‑94 (MQ=60)
               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                                <  SRR4302543.2610447/94‑1 (MQ=60)
               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                                >  SRR4302543.5767685/1‑94 (MQ=60)
               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                                >  SRR4302543.5767686/1‑94 (MQ=60)
               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                                <  SRR4302543.198051/94‑1 (MQ=60)
               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                                >  SRR4302543.5894199/1‑94 (MQ=60)
               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAC                                                                                >  SRR4302543.1842767/1‑94 (MQ=60)
                TGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTGGGTTTCTGACTCATCAGGCAAAAGC                                                                               >  SRR4302543.512248/1‑94 (MQ=60)
                TGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGC                                                                               >  SRR4302543.1423632/1‑94 (MQ=60)
                TGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGC                                                                               >  SRR4302543.512249/1‑94 (MQ=60)
                TGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGC                                                                               >  SRR4302543.2219843/1‑94 (MQ=60)
                 GCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCC                                                                              <  SRR4302543.6357271/94‑1 (MQ=60)
                  CGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCC                                                                             >  SRR4302543.2940637/1‑94 (MQ=60)
                   GCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCA                                                                            >  SRR4302543.5964779/1‑94 (MQ=60)
                    CGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAA                                                                           >  SRR4302543.5786922/1‑94 (MQ=60)
                    CGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCAACGCTCCGGTTTCTGACTCATCAGGTCACAGCCAAA                                                                           >  SRR4302543.1672068/1‑94 (MQ=60)
                    CGGAAATTAACGCTTCCAGGAACAGATAGCGGGCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAA                                                                           >  SRR4302543.2438549/1‑94 (MQ=60)
                     GGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGCCTCATCAGGTCAAAGCCCAAT                                                                          >  SRR4302543.2216009/1‑94 (MQ=60)
                     GGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAT                                                                          <  SRR4302543.303822/94‑1 (MQ=60)
                     GGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAT                                                                          <  SRR4302543.6290785/94‑1 (MQ=60)
                     GGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAT                                                                          <  SRR4302543.2105001/94‑1 (MQ=60)
                      GAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATG                                                                         <  SRR4302543.6496475/94‑1 (MQ=60)
                       AAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGG                                                                        >  SRR4302543.3721992/1‑94 (MQ=60)
                       AAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGG                                                                        >  SRR4302543.250679/1‑94 (MQ=60)
                       AAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGG                                                                        <  SRR4302543.3274268/94‑1 (MQ=60)
                       AAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCAAGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGG                                                                        <  SRR4302543.4465524/94‑1 (MQ=60)
                        AATTAACGCTTCCAGGAACAGATAGCGTTCGTCATCGCGACGCCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGC                                                                       <  SRR4302543.6414071/94‑1 (MQ=60)
                         ATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTGTGACTCCTCAGGTCCAAGCCGACTGGCG                                                                      >  SRR4302543.5618440/1‑94 (MQ=60)
                         ATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCG                                                                      >  SRR4302543.5618439/1‑94 (MQ=60)
                         ATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCG                                                                      >  SRR4302543.272517/1‑94 (MQ=60)
                         ATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCG                                                                      >  SRR4302543.7462520/1‑94 (MQ=60)
                         ATGAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCG                                                                      <  SRR4302543.408831/94‑1 (MQ=60)
                          TTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGC                                                                     <  SRR4302543.5987726/94‑1 (MQ=60)
                          TTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGC                                                                     >  SRR4302543.7375917/1‑94 (MQ=60)
                           TAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTTACTCATCAGGTCAAAGCCCAATGGCGCA                                                                    >  SRR4302543.7977954/1‑94 (MQ=60)
                           TAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCA                                                                    >  SRR4302543.4157486/1‑94 (MQ=60)
                           TAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCA                                                                    >  SRR4302543.1850299/1‑94 (MQ=60)
                            AACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAA                                                                   >  SRR4302543.6998794/1‑94 (MQ=60)
                            AACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAA                                                                   <  SRR4302543.2042853/94‑1 (MQ=60)
                            AACGCTTCCAGGAACAGATAGCGGTAGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAG                                                                   >  SRR4302543.5458561/1‑94 (MQ=60)
                             ACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAG                                                                  <  SRR4302543.3510687/94‑1 (MQ=60)
                             ACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAG                                                                  <  SRR4302543.1644558/94‑1 (MQ=60)
                              CGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGC                                                                 >  SRR4302543.7328302/1‑94 (MQ=60)
                               GCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCT                                                                <  SRR4302543.5713424/94‑1 (MQ=60)
                               GCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCT                                                                <  SRR4302543.1182238/94‑1 (MQ=60)
                               GCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCT                                                                >  SRR4302543.6217624/1‑94 (MQ=60)
                               GCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCT                                                                >  SRR4302543.1622581/1‑94 (MQ=60)
                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                               <  SRR4302543.519583/94‑1 (MQ=60)
                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                               >  SRR4302543.1740559/1‑94 (MQ=60)
                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                               <  SRR4302543.4214023/94‑1 (MQ=60)
                                 TTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGA                                                              <  SRR4302543.7246543/94‑1 (MQ=60)
                                 TTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGA                                                              <  SRR4302543.7655359/94‑1 (MQ=60)
                                  TCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAC                                                             >  SRR4302543.1367403/1‑94 (MQ=60)
                                  TCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAC                                                             <  SRR4302543.1737116/94‑1 (MQ=60)
                                  TCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAC                                                             >  SRR4302543.3610973/1‑94 (MQ=60)
                                   CCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACG                                                            <  SRR4302543.3363666/94‑1 (MQ=60)
                                   CCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACG                                                            >  SRR4302543.2476367/1‑94 (MQ=60)
                                   CCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACG                                                            <  SRR4302543.4228328/94‑1 (MQ=60)
                                    CAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGT                                                           <  SRR4302543.2026557/94‑1 (MQ=60)
                                    CAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGT                                                           <  SRR4302543.2379099/94‑1 (MQ=60)
                                    CAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGT                                                           <  SRR4302543.6281901/94‑1 (MQ=60)
                                     AGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCACAGCCCAATGGCGCAAGCTGACGTG                                                          >  SRR4302543.7578382/1‑94 (MQ=60)
                                     AGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTG                                                          <  SRR4302543.566732/94‑1 (MQ=60)
                                     AGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTG                                                          >  SRR4302543.4959093/1‑94 (MQ=60)
                                      AGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGG                                                         <  SRR4302543.502474/94‑1 (MQ=60)
                                        AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAT                                                       <  SRR4302543.3341029/94‑1 (MQ=60)
                                        AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAT                                                       <  SRR4302543.5776784/94‑1 (MQ=60)
                                        AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAT                                                       <  SRR4302543.6073218/94‑1 (MQ=60)
                                        AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAT                                                       <  SRR4302543.7967579/94‑1 (MQ=60)
                                         ACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATA                                                      >  SRR4302543.7609072/1‑94 (MQ=60)
                                         ACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATA                                                      <  SRR4302543.1747981/94‑1 (MQ=60)
                                          CAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAA                                                     >  SRR4302543.2579149/1‑94 (MQ=60)
                                          CAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAA                                                     >  SRR4302543.1396818/1‑94 (MQ=60)
                                          CAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGCCGCAAGCTGACGTGGATAA                                                     >  SRR4302543.1396822/1‑94 (MQ=60)
                                          CAGATAGCGGACGTCATCGCGACCGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCACAGCCCAATGGCGAAAGCTGACGTGGATAA                                                     >  SRR4302543.1360901/1‑94 (MQ=60)
                                           AGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAA                                                    >  SRR4302543.4361888/1‑94 (MQ=60)
                                           AGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAA                                                    >  SRR4302543.5809927/1‑94 (MQ=60)
                                            GATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAAC                                                   >  SRR4302543.54391/1‑94 (MQ=60)
                                            GATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAAC                                                   >  SRR4302543.6914908/1‑94 (MQ=60)
                                            GATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAAC                                                   <  SRR4302543.7586513/94‑1 (MQ=60)
                                            GATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAAC                                                   <  SRR4302543.2623807/94‑1 (MQ=60)
                                             ATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACG                                                  <  SRR4302543.2891010/94‑1 (MQ=60)
                                             ATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACG                                                  <  SRR4302543.2880568/94‑1 (MQ=60)
                                             ATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACG                                                  >  SRR4302543.5305874/1‑94 (MQ=60)
                                               AGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCC                                                <  SRR4302543.5832816/94‑1 (MQ=60)
                                                GCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCG                                               <  SRR4302543.3417560/94‑1 (MQ=60)
                                                GCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCG                                               <  SRR4302543.7004194/94‑1 (MQ=60)
                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                              >  SRR4302543.710078/1‑94 (MQ=60)
                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                              <  SRR4302543.4827268/94‑1 (MQ=60)
                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                              >  SRR4302543.1574339/1‑94 (MQ=60)
                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                              <  SRR4302543.7215516/94‑1 (MQ=60)
                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                              >  SRR4302543.7925135/1‑94 (MQ=60)
                                                  GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGTGCAAGCTGACGTGGATAAACGCCGTC                                             <  SRR4302543.2689797/94‑1 (MQ=60)
                                                  GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTG                                             >  SRR4302543.5281890/1‑94 (MQ=60)
                                                  GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC                                             >  SRR4302543.6151022/1‑94 (MQ=60)
                                                  GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC                                             >  SRR4302543.4220587/1‑94 (MQ=60)
                                                     CGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTT                                          <  SRR4302543.2964543/94‑1 (MQ=60)
                                                     CGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTT                                          <  SRR4302543.5232356/94‑1 (MQ=60)
                                                     CGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTT                                          <  SRR4302543.1220653/94‑1 (MQ=60)
                                                     CGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTT                                          >  SRR4302543.4103168/1‑94 (MQ=60)
                                                      GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC                                         >  SRR4302543.1398872/1‑94 (MQ=60)
                                                      GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC                                         >  SRR4302543.2496900/1‑94 (MQ=60)
                                                       TCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACCCCGTCGTTCA                                        >  SRR4302543.2044942/1‑94 (MQ=60)
                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                       <  SRR4302543.641319/94‑1 (MQ=60)
                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                       <  SRR4302543.7193799/94‑1 (MQ=60)
                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                       <  SRR4302543.7806088/94‑1 (MQ=60)
                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                       <  SRR4302543.6226110/94‑1 (MQ=60)
                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                       <  SRR4302543.293180/94‑1 (MQ=60)
                                                         ATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATT                                      >  SRR4302543.4786371/1‑94 (MQ=60)
                                                          TCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTC                                     <  SRR4302543.6311536/94‑1 (MQ=60)
                                                           CGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCC                                    <  SRR4302543.4479684/94‑1 (MQ=60)
                                                           CGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCC                                    <  SRR4302543.3233602/94‑1 (MQ=60)
                                                            GCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCC                                   >  SRR4302543.5942297/1‑94 (MQ=60)
                                                             CGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCA                                  <  SRR4302543.2005371/94‑1 (MQ=60)
                                                             CGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCA                                  <  SRR4302543.7616864/94‑1 (MQ=60)
                                                              GACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAG                                 >  SRR4302543.5900013/1‑94 (MQ=60)
                                                              GACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAG                                 <  SRR4302543.3495644/94‑1 (MQ=60)
                                                               ACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGC                                >  SRR4302543.7854148/1‑94 (MQ=60)
                                                                 GGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAG                              >  SRR4302543.2527499/1‑94 (MQ=60)
                                                                 GGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAG                              >  SRR4302543.7976882/1‑94 (MQ=60)
                                                                 GGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAG                              >  SRR4302543.4774490/1‑94 (MQ=60)
                                                                  GCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGG                             <  SRR4302543.7778511/94‑1 (MQ=60)
                                                                  GCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGG                             >  SRR4302543.747992/1‑94 (MQ=60)
                                                                    TACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCA                           <  SRR4302543.6805136/94‑1 (MQ=60)
                                                                     ACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAA                          >  SRR4302543.2622292/1‑94 (MQ=60)
                                                                     ACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAA                          <  SRR4302543.6883453/94‑1 (MQ=60)
                                                                       GGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAC                        <  SRR4302543.155584/94‑1 (MQ=60)
                                                                       GGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAC                        >  SRR4302543.2145747/1‑94 (MQ=60)
                                                                        GTCGCCCCGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACC                       <  SRR4302543.2965485/94‑1 (MQ=60)
                                                                        GTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACC                       >  SRR4302543.4716153/1‑94 (MQ=60)
                                                                        GTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACC                       >  SRR4302543.606740/1‑94 (MQ=60)
                                                                          CGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCAC                     >  SRR4302543.5344882/1‑94 (MQ=60)
                                                                            CCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTT                   <  SRR4302543.6683140/94‑1 (MQ=60)
                                                                             CACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTT                  >  SRR4302543.3847644/1‑94 (MQ=60)
                                                                             CACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTT                  <  SRR4302543.603738/94‑1 (MQ=60)
                                                                              ACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGCTCATTCCCAGCAGGCAAACCACTATG                 >  SRR4302543.6612226/1‑94 (MQ=60)
                                                                              ACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTG                 <  SRR4302543.2560628/94‑1 (MQ=60)
                                                                               CGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGA                <  SRR4302543.3527953/94‑1 (MQ=60)
                                                                               CGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGA                <  SRR4302543.1216516/94‑1 (MQ=60)
                                                                               CGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGA                <  SRR4302543.1589258/94‑1 (MQ=60)
                                                                               CGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGA                >  SRR4302543.4574136/1‑94 (MQ=60)
                                                                               CGCTTCCGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGA                <  SRR4302543.1216518/94‑1 (MQ=60)
                                                                                GCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAA               >  SRR4302543.1263860/1‑94 (MQ=60)
                                                                                GCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAA               <  SRR4302543.3540239/94‑1 (MQ=60)
                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC              >  SRR4302543.933157/1‑94 (MQ=60)
                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC              >  SRR4302543.855903/1‑94 (MQ=60)
                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC              >  SRR4302543.121250/1‑94 (MQ=60)
                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC              >  SRR4302543.1429089/1‑94 (MQ=60)
                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC              >  SRR4302543.6416954/1‑94 (MQ=60)
                                                                                 CTTCGGTGTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC              <  SRR4302543.144192/94‑1 (MQ=60)
                                                                                    CGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGA           >  SRR4302543.7592139/1‑94 (MQ=60)
                                                                                      GTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCACACCACTTTGAACGGAAT         >  SRR4302543.2449126/1‑94 (MQ=60)
                                                                                       TTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATT        >  SRR4302543.7353257/1‑94 (MQ=60)
                                                                                        TTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTG       <  SRR4302543.192128/94‑1 (MQ=60)
                                                                                        TTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTG       >  SRR4302543.1425751/1‑94 (MQ=60)
                                                                                         TCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA      <  SRR4302543.7697161/94‑1 (MQ=60)
                                                                                         TCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA      >  SRR4302543.7449944/1‑94 (MQ=60)
                                                                                         TCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA      <  SRR4302543.2581325/94‑1 (MQ=60)
                                                                                         TCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA      >  SRR4302543.2007617/1‑94 (MQ=60)
                                                                                          CTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAA     >  SRR4302543.4331805/1‑94 (MQ=60)
                                                                                           TGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAAC    <  SRR4302543.6427732/94‑1 (MQ=60)
                                                                                           TGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAAC    <  SRR4302543.4604848/94‑1 (MQ=60)
                                                                                           TGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAAC    <  SRR4302543.1891925/94‑1 (MQ=60)
                                                                                           TGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAAC    <  SRR4302543.1617381/94‑1 (MQ=60)
                                                                                            GACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACG   <  SRR4302543.2155172/94‑1 (MQ=60)
                                                                                             ACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACGC  <  SRR4302543.5835285/94‑1 (MQ=60)
                                                                                             |                                                                                             
GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACGC  >  NC_000913/2958264‑2958450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: