Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,016,772 |
T→C |
C898R (TGC→CGC) |
b2878 → |
putative oxidoreductase Fe‑S subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,016,772 | 0 | T | C | 100.0%
| 552.2
/ NA
| 177 | C898R (TGC→CGC) | b2878 | putative oxidoreductase Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (93/84); total (93/84) |
Only 100 of 194 total aligned reads displayed.
GCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAAC > NC_000913/3016682‑3016861
|
gCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTcgccgc > 1:1559215/1‑93 (MQ=255)
ggAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCt > 2:445727/1‑93 (MQ=255)
gAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTc < 2:1601680/93‑1 (MQ=255)
gAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTc > 2:2810506/1‑93 (MQ=255)
gAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTc > 1:556901/1‑93 (MQ=255)
gAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTc > 2:4219075/1‑93 (MQ=255)
aaaTCTATCAACGTAACGTTAAGATCCCTAGCACGCTGGTGAACAGTGACGTTCGGGCCGCGTTGGTCGCCCAGGAACCCGCTCGCCCCCTCg < 2:2149206/93‑1 (MQ=255)
aaaTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCg > 2:3043801/1‑93 (MQ=255)
aaTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGa > 2:2476808/1‑93 (MQ=255)
aaTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGa > 2:197496/1‑93 (MQ=255)
aaTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGa > 2:506347/1‑93 (MQ=255)
aTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAGGCCGCTCGCCGCCTCGaa < 2:2875458/93‑1 (MQ=255)
aTCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGaa > 1:3340219/1‑93 (MQ=255)
tCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAAt > 1:2025165/1‑93 (MQ=255)
tCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAAt < 1:1701052/93‑1 (MQ=255)
tCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAAt < 1:3831751/93‑1 (MQ=255)
cTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATg < 1:1803566/93‑1 (MQ=255)
tATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGt < 2:4626283/93‑1 (MQ=255)
tATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGt > 1:3318453/1‑93 (MQ=255)
aTCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTa < 1:3241435/93‑1 (MQ=255)
tCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTaa > 1:2119933/1‑93 (MQ=255)
tCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTaa > 2:2027508/1‑93 (MQ=255)
cAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAAc < 2:4300711/93‑1 (MQ=255)
aaCGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACt > 2:3678808/1‑93 (MQ=255)
aCGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTa < 1:431767/93‑1 (MQ=255)
aCGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTa > 2:1869724/1‑93 (MQ=255)
aCGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTa < 2:3032055/93‑1 (MQ=255)
gTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACg > 1:2059301/1‑93 (MQ=255)
gTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACg > 1:2148125/1‑93 (MQ=255)
gTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACg > 1:921174/1‑93 (MQ=255)
tAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGt > 1:3595019/1‑93 (MQ=255)
tAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGt > 1:527365/1‑93 (MQ=255)
tAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGt > 1:3556706/1‑93 (MQ=255)
tAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGt > 2:2045013/1‑93 (MQ=255)
aaaGGCGATATCTCTATCGCGCTGGTGAACAGTGACTATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGtt < 1:1431585/93‑1 (MQ=255)
aaaGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGtt > 2:3248411/1‑93 (MQ=255)
ggCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTga > 2:4035321/1‑92 (MQ=255)
gCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgca < 2:348694/93‑1 (MQ=255)
gCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgca < 1:792987/93‑1 (MQ=255)
cGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgcag < 1:3107210/93‑1 (MQ=255)
gATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTgcagc > 2:18290/1‑93 (MQ=255)
tatCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCaa > 1:3051203/1‑93 (MQ=255)
atCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAg < 1:1424017/93‑1 (MQ=255)
tctcTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgt > 2:2079265/1‑93 (MQ=255)
ctctATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtg < 2:3442413/93‑1 (MQ=255)
tctATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgt > 1:1294480/1‑93 (MQ=255)
ctATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgtg < 2:2186350/93‑1 (MQ=255)
tATCCCGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgtgt < 2:4156557/93‑1 (MQ=255)
tATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAgtgtgt > 2:1117416/1‑93 (MQ=255)
aTCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGtgtgtg < 2:4100473/93‑1 (MQ=255)
aTCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGtgtgtg > 2:1007145/1‑93 (MQ=255)
cACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGa < 1:2966902/93‑1 (MQ=255)
cACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGa < 1:230305/93‑1 (MQ=255)
tGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGcc > 1:4503127/1‑93 (MQ=255)
aagaGTGACGATCGTGTCGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCg < 2:1765982/90‑1 (MQ=255)
aaCAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCg < 2:3978282/93‑1 (MQ=255)
cAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGaa > 1:2902792/1‑93 (MQ=255)
aGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAAc > 2:1078177/1‑93 (MQ=255)
aGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAAc < 2:2673885/93‑1 (MQ=255)
gTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAAcc < 2:3195005/93‑1 (MQ=255)
gTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAAcc > 1:4265079/1‑93 (MQ=255)
gTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAAcc > 1:86373/1‑93 (MQ=255)
aCGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACcgcg > 2:2733404/1‑93 (MQ=255)
aCGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACcgcg > 1:2223245/1‑93 (MQ=255)
gATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGcc < 1:429505/93‑1 (MQ=255)
tCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCaa > 2:4182674/1‑93 (MQ=255)
tCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGACaa > 1:1871171/1‑93 (MQ=255)
gTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACg < 2:801100/93‑1 (MQ=255)
tGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGt < 2:2637692/93‑1 (MQ=255)
tGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGt > 2:3259782/1‑93 (MQ=255)
gACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtc > 1:3863519/1‑93 (MQ=255)
aCGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtct < 1:1079354/93‑1 (MQ=255)
aCGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtct > 1:397772/1‑93 (MQ=255)
cgcgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtctc < 1:4563080/93‑1 (MQ=255)
cgcgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtctc > 1:3262439/1‑93 (MQ=255)
cgcgTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtctc < 2:4065330/93‑1 (MQ=255)
cccgTTTGTCGCACAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGtctc < 2:1583566/91‑1 (MQ=255)
tttGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCAtt < 2:3865458/93‑1 (MQ=255)
ttGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTg > 1:2542813/1‑93 (MQ=255)
tGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGc < 2:4358761/93‑1 (MQ=255)
gTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCg < 2:3067727/93‑1 (MQ=255)
tCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCgg < 1:4014359/93‑1 (MQ=255)
ccAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTccc > 2:1282066/1‑93 (MQ=255)
ccAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGGCTTCCCGAACCGCGCCAACGTCTCCATTGCGGTctc > 1:3115141/1‑91 (MQ=255)
ccAGCAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGCGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTccc < 1:2512459/93‑1 (MQ=255)
cAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCa < 1:3480072/93‑1 (MQ=255)
cAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCa > 1:308439/1‑93 (MQ=255)
aGGAAGCCGCTGGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAg > 2:2825168/1‑93 (MQ=255)
aGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAg > 1:4148273/1‑93 (MQ=255)
ggAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAgg > 2:935657/1‑93 (MQ=255)
gAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGc > 1:4319355/1‑93 (MQ=255)
aaGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCt < 1:2545051/93‑1 (MQ=255)
gCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTc < 1:1589276/93‑1 (MQ=255)
ccGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTcc < 1:4171504/93‑1 (MQ=255)
ccGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTcc < 2:1448582/93‑1 (MQ=255)
cgctcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCa > 2:364074/1‑93 (MQ=255)
cgctcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCa > 1:751913/1‑93 (MQ=255)
cgctcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCa > 2:1541873/1‑93 (MQ=255)
ctcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGa > 2:2308933/1‑93 (MQ=255)
tcgccGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGaa > 2:254330/1‑93 (MQ=255)
|
GCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAAC > NC_000913/3016682‑3016861
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAACCGTT > NC_000913/3016679‑3016865
|
CCAGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCC < SRR4302535.3130335/94‑1 (MQ=60)
CCAGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCC > SRR4302535.1824739/1‑94 (MQ=60)
AGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGC > SRR4302535.3134027/1‑94 (MQ=60)
AGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGC > SRR4302535.547799/1‑94 (MQ=60)
AGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGC > SRR4302535.1570456/1‑94 (MQ=60)
GGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTC > SRR4302535.560803/1‑94 (MQ=60)
AAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGA > SRR4302535.3921171/1‑94 (MQ=60)
AAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGATTGTGGCCCAGGAAGCCGCTCGCCGCCTCGA > SRR4302535.2118115/1‑94 (MQ=60)
AATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAA > SRR4302535.3363494/1‑94 (MQ=60)
ATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAAT < SRR4302535.3292340/94‑1 (MQ=60)
ATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAAT > SRR4302535.2039760/1‑94 (MQ=60)
TCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATG < SRR4302535.1713346/94‑1 (MQ=60)
TCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATG < SRR4302535.3858173/94‑1 (MQ=60)
CTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGT > SRR4302535.3341541/1‑94 (MQ=60)
CTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGT < SRR4302535.1816600/94‑1 (MQ=60)
TATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTA > SRR4302535.153634/1‑94 (MQ=60)
ATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAA > SRR4302535.2135223/1‑94 (MQ=60)
ATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAA < SRR4302535.3263948/94‑1 (MQ=60)
CAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACT < SRR4302535.144137/94‑1 (MQ=60)
CAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACT < SRR4302535.4360638/94‑1 (MQ=60)
CAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACT < SRR4302535.4685217/94‑1 (MQ=60)
ACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTAC < SRR4302535.434774/94‑1 (MQ=60)
CGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACG > SRR4302535.2163573/1‑94 (MQ=60)
CGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACG > SRR4302535.927706/1‑94 (MQ=60)
CGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACG > SRR4302535.2074139/1‑94 (MQ=60)
GTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGT > SRR4302535.3587945/1‑94 (MQ=60)
GTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGT > SRR4302535.3453341/1‑94 (MQ=60)
GTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGT > SRR4302535.3581375/1‑94 (MQ=60)
GTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGT > SRR4302535.3619967/1‑94 (MQ=60)
GTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGT > SRR4302535.531049/1‑94 (MQ=60)
GTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGT > SRR4302535.2228762/1‑94 (MQ=60)
TAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTT > SRR4302535.2967666/1‑94 (MQ=60)
AAAGGCGATATCTCTATCGCGCTGGTGAACAGTGACTATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTT < SRR4302535.1441803/94‑1 (MQ=60)
AAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTT < SRR4302535.2055603/94‑1 (MQ=60)
AAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTG > SRR4302535.3270652/1‑94 (MQ=60)
AAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTG < SRR4302535.604972/94‑1 (MQ=60)
AGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGACGCTCGCCGCCTCGAATGTAACTACGTTTGC > SRR4302535.2246349/1‑94 (MQ=60)
GCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAG < SRR4302535.798560/94‑1 (MQ=60)
CGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGC < SRR4302535.3128844/94‑1 (MQ=60)
CGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGC > SRR4302535.2640451/1‑94 (MQ=60)
GATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGAGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCA > SRR4302535.1993558/1‑94 (MQ=60)
ATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAA > SRR4302535.3851156/1‑94 (MQ=60)
ATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAA > SRR4302535.3072577/1‑94 (MQ=60)
TATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAG > SRR4302535.4270074/1‑94 (MQ=60)
ATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGT > SRR4302535.1640207/1‑94 (MQ=60)
ATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGT < SRR4302535.1434186/94‑1 (MQ=60)
TCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTG < SRR4302535.388753/94‑1 (MQ=60)
TCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTG < SRR4302535.1865080/94‑1 (MQ=60)
CTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGT > SRR4302535.1303708/1‑94 (MQ=60)
CTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGG > SRR4302535.4317455/1‑94 (MQ=60)
TCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTG < SRR4302535.4325641/94‑1 (MQ=60)
ATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGG < SRR4302535.2141673/94‑1 (MQ=60)
ATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGG < SRR4302535.766312/94‑1 (MQ=60)
TCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCTCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGA < SRR4302535.2537046/94‑1 (MQ=60)
CACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGAT < SRR4302535.2987718/94‑1 (MQ=60)
CACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGAT < SRR4302535.158615/94‑1 (MQ=60)
CACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGAT < SRR4302535.231893/94‑1 (MQ=60)
GTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCC > SRR4302535.4534047/1‑94 (MQ=60)
TGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCC > SRR4302535.4181803/1‑94 (MQ=60)
GAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCG < SRR4302535.875885/94‑1 (MQ=60)
ACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAA > SRR4302535.2923311/1‑94 (MQ=60)
AGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACC > SRR4302535.86982/1‑94 (MQ=60)
AGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACC > SRR4302535.4294287/1‑94 (MQ=60)
AGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACC > SRR4302535.4348133/1‑94 (MQ=60)
GTGACGATCGTGACGCGGTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCG < SRR4302535.95471/94‑1 (MQ=60)
GACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCG > SRR4302535.2239070/1‑94 (MQ=60)
GATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCA > SRR4302535.3026460/1‑94 (MQ=60)
GATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCA < SRR4302535.432490/94‑1 (MQ=60)
ATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGACAA > SRR4302535.1884656/1‑94 (MQ=60)
TGACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTC > SRR4302535.3890098/1‑94 (MQ=60)
GACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCT > SRR4302535.400559/1‑94 (MQ=60)
GACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCT > SRR4302535.82577/1‑94 (MQ=60)
GACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCT > SRR4302535.3354613/1‑94 (MQ=60)
ACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTC > SRR4302535.3285100/1‑94 (MQ=60)
ACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTC > SRR4302535.416268/1‑94 (MQ=60)
ACGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTC < SRR4302535.1087036/94‑1 (MQ=60)
CGCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCC < SRR4302535.4594220/94‑1 (MQ=60)
GCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCA > SRR4302535.133546/1‑94 (MQ=60)
GCGTTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCA > SRR4302535.4542187/1‑94 (MQ=60)
TTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTG < SRR4302535.1797753/94‑1 (MQ=60)
TTTGTCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTG > SRR4302535.2561124/1‑94 (MQ=60)
TCGCCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGT < SRR4302535.4041815/94‑1 (MQ=60)
CCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCC < SRR4302535.3107222/94‑1 (MQ=60)
CCCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGGCTTCCCGAACCGCGCCAACGTCTCCATTGCGGTCTC > SRR4302535.3136829/1‑94 (MQ=60)
CCAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCA > SRR4302535.310579/1‑94 (MQ=60)
CCAGCAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGCGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCA < SRR4302535.2530572/94‑1 (MQ=60)
CAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAG > SRR4302535.4176674/1‑94 (MQ=60)
CAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAG < SRR4302535.3576077/94‑1 (MQ=60)
CAGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAG < SRR4302535.3504249/94‑1 (MQ=60)
AGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCCTTGCGGTCCCAGG > SRR4302535.3215952/1‑94 (MQ=60)
AGGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGG < SRR4302535.3091322/94‑1 (MQ=60)
GGAAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGC > SRR4302535.4348904/1‑94 (MQ=60)
AAGCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTT < SRR4302535.2563373/94‑1 (MQ=60)
GCCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCC < SRR4302535.1600746/94‑1 (MQ=60)
CCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCA < SRR4302535.4200062/94‑1 (MQ=60)
CCGCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCA > SRR4302535.757206/1‑94 (MQ=60)
GCTCGCCGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGA < SRR4302535.2472600/94‑1 (MQ=60)
CGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAACCGTT > SRR4302535.4095506/1‑94 (MQ=60)
CGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAACCGTT < SRR4302535.2568240/94‑1 (MQ=60)
CGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAACCGTT < SRR4302535.2853426/94‑1 (MQ=60)
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CCAGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAACCGTT > NC_000913/3016679‑3016865
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
