Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,026,063 |
A→G |
D129G (GAC→GGC) |
ygfR → |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,026,063 | 0 | A | G | 99.4%
| 551.1
/ ‑4.4
| 173 | D129G (GAC→GGC) | ygfR | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (90/82); minor base T (0/1); total (90/83) |
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.19e-01 |
Only 100 of 176 total aligned reads displayed.
CTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGACTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGT > NC_000913/3025973‑3026151
|
ctccTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACACCCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCt < 2:1729931/90‑1 (MQ=255)
cTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAg > 2:669405/1‑93 (MQ=255)
cTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAg > 2:4493845/1‑93 (MQ=255)
cTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAg < 1:2227057/93‑1 (MQ=255)
gCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTaa > 2:4211804/1‑93 (MQ=255)
aCCATCCGGGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAACACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGAGCCTCAGGAAGt > 1:1447587/1‑93 (MQ=255)
ccATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGtt < 2:3133025/93‑1 (MQ=255)
ccATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGtt > 2:1285205/1‑93 (MQ=255)
ccATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGtt > 1:1706564/1‑93 (MQ=255)
ccATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGtt > 1:4221902/1‑93 (MQ=255)
aTCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCa > 2:4343916/1‑93 (MQ=255)
tCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCaa < 1:455128/93‑1 (MQ=255)
tCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCaa < 2:2052444/93‑1 (MQ=255)
tCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGGAAGTTCaa > 2:2054597/1‑93 (MQ=255)
ccGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAat < 2:399721/93‑1 (MQ=255)
ccGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAat < 1:3671445/93‑1 (MQ=255)
cGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAata < 2:1049105/93‑1 (MQ=255)
cGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAata < 2:3667302/93‑1 (MQ=255)
cGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAata < 2:1510951/93‑1 (MQ=255)
gTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAatat < 1:4279348/93‑1 (MQ=255)
gTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAatat < 1:1999536/93‑1 (MQ=255)
gTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAatat > 2:3640346/1‑93 (MQ=255)
gTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAatat < 2:1572465/93‑1 (MQ=255)
tGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATAtt > 1:2586860/1‑93 (MQ=255)
tGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGATCAATAtt > 1:1119848/1‑93 (MQ=255)
ccGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATtct < 1:674850/93‑1 (MQ=255)
cGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATtctc < 2:1532218/93‑1 (MQ=255)
cGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATtctc < 2:224628/93‑1 (MQ=255)
gTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTcc < 2:1669548/93‑1 (MQ=255)
tCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCg < 1:1320643/93‑1 (MQ=255)
ccGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGcc < 2:641148/93‑1 (MQ=255)
cGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCt > 2:281764/1‑93 (MQ=255)
cGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGCTCAATATTCTCCGGCCt > 1:509330/1‑93 (MQ=255)
ggTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCtg > 1:2817685/1‑93 (MQ=255)
gTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGGGGCTCAGTAAGTTCAATATTCTCCGGCCtgg > 1:3977589/1‑93 (MQ=255)
tCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCtggt < 1:3406070/93‑1 (MQ=255)
tCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCtggg > 1:1544871/1‑92 (MQ=255)
aGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCTGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCtggtgg > 2:4181457/1‑93 (MQ=255)
ggCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTggg > 2:2949223/1‑93 (MQ=255)
cGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGACCTGGTGGgcg > 1:1547976/1‑93 (MQ=255)
aaTTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCa < 1:1269756/93‑1 (MQ=255)
aTTGGTTGGATAAAGACAACCAGTTCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAg < 2:1335833/93‑1 (MQ=255)
tttGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAgc < 1:2180034/93‑1 (MQ=255)
tttGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAgc < 2:3451811/93‑1 (MQ=255)
ttgttgGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAgcg > 2:2552543/1‑93 (MQ=255)
ttgttgGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAgcg > 2:372291/1‑93 (MQ=255)
ttgttgGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAgcg > 2:875024/1‑93 (MQ=255)
gttgGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGcc > 1:2689003/1‑93 (MQ=255)
ttgGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGccc > 1:312227/1‑93 (MQ=255)
tgGATAAAGACAACCAGATCATCAACGGAGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGTTGTGCGCAGCGCCCg > 2:2327652/1‑93 (MQ=255)
ggATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGc > 2:4457796/1‑93 (MQ=255)
gATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCa < 1:114459/93‑1 (MQ=255)
aTAAAGACAACCAGATCATCAACTGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAg < 1:938279/93‑1 (MQ=255)
tAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGTCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGc < 1:1420907/93‑1 (MQ=255)
tAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGc > 2:1215533/1‑93 (MQ=255)
tAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGc < 2:2748906/93‑1 (MQ=255)
aGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGt > 2:2388088/1‑93 (MQ=255)
gACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGtt < 1:2534386/93‑1 (MQ=255)
aCAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGttt < 2:791085/93‑1 (MQ=255)
aCCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTtata < 1:2565607/93‑1 (MQ=255)
ccAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTatat < 1:3010317/93‑1 (MQ=255)
cAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATc < 2:3368823/93‑1 (MQ=255)
aGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCg > 1:75232/1‑93 (MQ=255)
gATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGa > 1:2366759/1‑93 (MQ=255)
gATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGa > 2:505492/1‑93 (MQ=255)
atcatcAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGaa > 2:4385522/1‑93 (MQ=255)
atcatcAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGaa > 2:4016757/1‑93 (MQ=255)
tcatcaACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGTTGGGCGCGGCGCCCGCAGCGGTTTATATCGAAt > 1:2052839/1‑93 (MQ=255)
tcatcaACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCgcac > 1:1317094/1‑90 (MQ=255)
tcatcaACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAAt > 1:2941615/1‑93 (MQ=255)
tcatcaACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAAt > 1:3968749/1‑93 (MQ=255)
catcaACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATc < 1:1397726/93‑1 (MQ=255)
catcaACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATc < 1:4636823/93‑1 (MQ=255)
tcaACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAg < 1:2835093/93‑1 (MQ=255)
caACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGc < 1:3221848/93‑1 (MQ=255)
caACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGc < 1:2539764/93‑1 (MQ=255)
caACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGc < 2:1423544/93‑1 (MQ=255)
aaCGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCg > 1:111334/1‑93 (MQ=255)
aCGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCgg < 2:3838778/93‑1 (MQ=255)
cggcggCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGc > 2:2891481/1‑93 (MQ=255)
cggcggCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGc > 1:3039141/1‑93 (MQ=255)
ggcggcAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCa < 1:951122/93‑1 (MQ=255)
ggcggcAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCa < 1:156127/93‑1 (MQ=255)
cggcAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAgg < 1:1280819/93‑1 (MQ=255)
gcAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGaa > 2:4263790/1‑93 (MQ=255)
cAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAc < 1:4351915/93‑1 (MQ=255)
cAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAc < 2:4036142/93‑1 (MQ=255)
aaGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAccg > 1:1168488/1‑93 (MQ=255)
aGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAccgc > 2:3563963/1‑93 (MQ=255)
aGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAccgc < 2:266040/93‑1 (MQ=255)
aGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAacgc > 2:4140774/1‑93 (MQ=255)
gCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGGAccgcc > 2:2449286/1‑93 (MQ=255)
ccTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAccgccgc < 1:2270438/93‑1 (MQ=255)
cTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAAccgccgcc < 2:3057284/93‑1 (MQ=255)
aCCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCggg < 1:212965/93‑1 (MQ=255)
ccAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCgggg > 1:2300426/1‑93 (MQ=255)
ccAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCgggg < 1:4505364/93‑1 (MQ=255)
cAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCggggg < 2:4608016/93‑1 (MQ=255)
cAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCggggg > 1:1820781/1‑93 (MQ=255)
aGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCgggggg > 1:1212526/1‑92 (MQ=255)
|
CTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGACTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGT > NC_000913/3025973‑3026151
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGCTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGACTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGTAAAAC > NC_000913/3025970‑3026156
|
ACGCTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGG < SRR4302535.521150/94‑1 (MQ=60)
CGCTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGC > SRR4302535.3620849/1‑94 (MQ=60)
TACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCA > SRR4302535.1425832/1‑94 (MQ=60)
CTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGT > SRR4302535.1143883/1‑94 (MQ=60)
CTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGT < SRR4302535.2242902/94‑1 (MQ=60)
CTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGT > SRR4302535.1281351/1‑94 (MQ=60)
CTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGT < SRR4302535.2177061/94‑1 (MQ=60)
TGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTA > SRR4302535.728248/1‑94 (MQ=60)
CACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACGACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGT > SRR4302535.3064114/1‑94 (MQ=60)
CACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGT > SRR4302535.2036899/1‑94 (MQ=60)
CACCATCCGGGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAACACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGAGCCTCAGGAAGT > SRR4302535.1457937/1‑94 (MQ=60)
ACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTT > SRR4302535.4250791/1‑94 (MQ=60)
ACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTT > SRR4302535.2374163/1‑94 (MQ=60)
ACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTT > SRR4302535.1718900/1‑94 (MQ=60)
CATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCA > SRR4302535.1761325/1‑94 (MQ=60)
TCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAAT < SRR4302535.458313/94‑1 (MQ=60)
CCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATA < SRR4302535.3696872/94‑1 (MQ=60)
GTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATT < SRR4302535.2013940/94‑1 (MQ=60)
GTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATT < SRR4302535.4308631/94‑1 (MQ=60)
GTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATT > SRR4302535.2605437/1‑94 (MQ=60)
GTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGATCAATATT > SRR4302535.1127834/1‑94 (MQ=60)
TGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTC < SRR4302535.3998337/94‑1 (MQ=60)
CCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTC < SRR4302535.679568/94‑1 (MQ=60)
GTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCG < SRR4302535.1329976/94‑1 (MQ=60)
TCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGG < SRR4302535.1330075/94‑1 (MQ=60)
CCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGCTCAATATTCTCCGGCCT > SRR4302535.512892/1‑94 (MQ=60)
CGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTG > SRR4302535.2837699/1‑94 (MQ=60)
GGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGGGGCTCAGTAAGTTCAATATTCTCCGGCCTGG > SRR4302535.4004763/1‑94 (MQ=60)
GTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGT < SRR4302535.1170167/94‑1 (MQ=60)
GTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGG > SRR4302535.1555997/1‑94 (MQ=60)
TCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTG < SRR4302535.3429777/94‑1 (MQ=60)
CAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGG > SRR4302535.151428/1‑94 (MQ=60)
GGCGAATTTGTTAGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGG > SRR4302535.2843876/1‑94 (MQ=60)
GCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGACCTGGTGGGCG > SRR4302535.1559127/1‑94 (MQ=60)
AATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAG < SRR4302535.1278830/94‑1 (MQ=60)
TTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCG < SRR4302535.2195594/94‑1 (MQ=60)
TGTTGGATAAAGACAACCAGATCATCAACGGCTGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCC < SRR4302535.2661108/94‑1 (MQ=60)
TGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCC > SRR4302535.2708221/1‑94 (MQ=60)
TGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCC > SRR4302535.2393136/1‑94 (MQ=60)
GTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCC > SRR4302535.314390/1‑94 (MQ=60)
GATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAG < SRR4302535.115264/94‑1 (MQ=60)
ATAAAGACAACCAGATCATCAACTGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGC < SRR4302535.944925/94‑1 (MQ=60)
ATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGC > SRR4302535.600868/1‑94 (MQ=60)
TAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGTCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCG < SRR4302535.1431051/94‑1 (MQ=60)
TAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCG < SRR4302535.1643629/94‑1 (MQ=60)
TAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCG < SRR4302535.858438/94‑1 (MQ=60)
GACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTT < SRR4302535.2552641/94‑1 (MQ=60)
GACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTT < SRR4302535.1434241/94‑1 (MQ=60)
CAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTAT < SRR4302535.1199253/94‑1 (MQ=60)
CAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTAT < SRR4302535.2302797/94‑1 (MQ=60)
AACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATA > SRR4302535.2073618/1‑94 (MQ=60)
ACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATAT < SRR4302535.2584068/94‑1 (MQ=60)
ACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATAT < SRR4302535.4551640/94‑1 (MQ=60)
CCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATC < SRR4302535.1315992/94‑1 (MQ=60)
CCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATC < SRR4302535.3031402/94‑1 (MQ=60)
CAGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCG > SRR4302535.75782/1‑94 (MQ=60)
AGATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGA > SRR4302535.2383749/1‑94 (MQ=60)
ATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGTTGGGCGCGGCGCCCGCAGCGGTTTATATCGAAT > SRR4302535.2067620/1‑94 (MQ=60)
ATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGcac > SRR4302535.1326504/1‑91 (MQ=60)
ATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAAT > SRR4302535.2962296/1‑94 (MQ=60)
ATCATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAAT > SRR4302535.3995854/1‑94 (MQ=60)
CATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCA < SRR4302535.1407705/94‑1 (MQ=60)
CATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCA < SRR4302535.4668276/94‑1 (MQ=60)
ATCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAG > SRR4302535.3787844/1‑94 (MQ=60)
TCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGC < SRR4302535.2855210/94‑1 (MQ=60)
TCAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGC > SRR4302535.4323734/1‑94 (MQ=60)
CAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCG > SRR4302535.112118/1‑94 (MQ=60)
CAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCG < SRR4302535.3244178/94‑1 (MQ=60)
CAACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCG < SRR4302535.2558059/94‑1 (MQ=60)
ACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGC < SRR4302535.480702/94‑1 (MQ=60)
ACGGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGC > SRR4302535.3060426/1‑94 (MQ=60)
GGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAG < SRR4302535.957854/94‑1 (MQ=60)
GGCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAG < SRR4302535.157232/94‑1 (MQ=60)
GCGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGG < SRR4302535.4492670/94‑1 (MQ=60)
CGGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGA < SRR4302535.1289961/94‑1 (MQ=60)
GGCAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAA < SRR4302535.2944405/94‑1 (MQ=60)
CAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACC < SRR4302535.3281925/94‑1 (MQ=60)
CAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACC < SRR4302535.4381694/94‑1 (MQ=60)
CAAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACC > SRR4302535.4227563/1‑94 (MQ=60)
AAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCG > SRR4302535.1176829/1‑94 (MQ=60)
AAAGCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACAG > SRR4302535.2258961/1‑94 (MQ=60)
GCCCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCG > SRR4302535.2596831/1‑94 (MQ=60)
CCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCC < SRR4302535.2286628/94‑1 (MQ=60)
CCTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCC > SRR4302535.1563207/1‑94 (MQ=60)
CTGACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCG > SRR4302535.2577107/1‑94 (MQ=60)
ACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGG > SRR4302535.2316888/1‑94 (MQ=60)
ACCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGG < SRR4302535.214428/94‑1 (MQ=60)
CCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGG < SRR4302535.4536295/94‑1 (MQ=60)
CCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGG > SRR4302535.1833936/1‑94 (MQ=60)
CCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGG < SRR4302535.3163820/94‑1 (MQ=60)
CCAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGGTTATATCGAATCAGCGGCAGGAAACGCCGCCGGGGG > SRR4302535.3028263/1‑94 (MQ=60)
CAGTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGG > SRR4302535.1221224/1‑94 (MQ=60)
GTGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGTAA > SRR4302535.689741/1‑94 (MQ=60)
TGGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGGAAA > SRR4302535.2447091/1‑94 (MQ=60)
GGCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGGAAAA > SRR4302535.1182014/1‑94 (MQ=60)
GCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGTAAAAC < SRR4302535.1404234/94‑1 (MQ=60)
GCTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGTAAAAC < SRR4302535.1876533/94‑1 (MQ=60)
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ACGCTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGACTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGTAAAAC > NC_000913/3025970‑3026156
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
