Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,027,430 |
A→G |
F513L (TTC→CTC) |
ygfT ← |
putative oxidoreductase Fe‑S subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,027,430 | 0 | A | G | 99.0%
| 968.9
/ ‑2.5
| 305 | F513L (TTC→CTC) | ygfT | putative oxidoreductase Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (166/136); total (168/137) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 310 total aligned reads displayed.
GCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCA > NC_000913/3027340‑3027519
|
gcgccGGCTCACCCATGGCGGTACGAATCAGGCCCTCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTTAACATTGAGCt < 1:7083653/90‑1 (MQ=255)
cccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGa < 2:3677348/93‑1 (MQ=255)
cccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGa > 1:5067816/1‑93 (MQ=255)
cGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaaa > 1:6590954/1‑93 (MQ=255)
cGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaaa > 1:3187509/1‑93 (MQ=255)
ggCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAAc < 2:5222645/93‑1 (MQ=255)
gCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACt > 2:4136769/1‑93 (MQ=255)
cTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTc > 2:2631217/1‑93 (MQ=255)
tCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCg > 1:6625579/1‑93 (MQ=255)
cACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGa > 2:1321889/1‑93 (MQ=255)
aCCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGac > 1:263156/1‑93 (MQ=255)
tGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCtt > 2:4663169/1‑93 (MQ=255)
tGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCtt > 1:548906/1‑93 (MQ=255)
tGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCtt > 2:6806768/1‑93 (MQ=255)
tGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCtt > 1:412100/1‑93 (MQ=255)
tgCGGTACGAATGAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACGAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACTTTc < 2:4209316/92‑1 (MQ=255)
ggCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTc > 1:8707/1‑93 (MQ=255)
cGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCt < 1:5758823/93‑1 (MQ=255)
ggTACGAATCACGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTc < 2:5846963/93‑1 (MQ=255)
gTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTcg < 1:3870333/93‑1 (MQ=255)
gTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTcg > 1:7584910/1‑93 (MQ=255)
tACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACCTTGAGCTGAAACTCGACACCTTCCTcgc > 1:4353296/1‑93 (MQ=255)
tACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTcgc > 1:6968052/1‑93 (MQ=255)
aCGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTcgcg < 2:2835010/93‑1 (MQ=255)
cGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTcgcgc < 1:530744/93‑1 (MQ=255)
aTCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCa > 1:2106144/1‑93 (MQ=255)
aTCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCa < 2:1927331/93‑1 (MQ=255)
tCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCAt > 1:6049965/1‑93 (MQ=255)
acAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCAt < 1:2804648/92‑1 (MQ=255)
cAGGCCCACCGCAGTGAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCAtt < 1:220448/93‑1 (MQ=255)
aGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCTTTa > 1:6246734/1‑93 (MQ=255)
ggCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTaa > 2:7367735/1‑93 (MQ=255)
ggCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTaa > 1:4801340/1‑93 (MQ=255)
gCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAac < 1:7706943/93‑1 (MQ=255)
ccACCGCAGTTAAACGCCCATCTTCGTCGCAAGCGATATATTGCGGTTGAACATTGAGCTGAACCTCGACAACTTCCTCGCGCGCATTAacca < 1:1408554/93‑1 (MQ=255)
ccACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAacca > 2:1834095/1‑93 (MQ=255)
cACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccac > 2:5705356/1‑93 (MQ=255)
cACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccac < 1:2743954/93‑1 (MQ=255)
cccGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc < 2:6454906/92‑1 (MQ=255)
aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc > 2:3176845/1‑93 (MQ=255)
aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc > 1:7223842/1‑93 (MQ=255)
ccGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACct > 2:3587290/1‑93 (MQ=255)
cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt < 1:13092/93‑1 (MQ=255)
aGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCttt < 1:1182420/93‑1 (MQ=255)
aGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCttt < 1:1793365/93‑1 (MQ=255)
gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTCACCCCCTCTTTg > 2:7053620/1‑93 (MQ=255)
gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg > 2:7861913/1‑93 (MQ=255)
gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg < 1:6405213/93‑1 (MQ=255)
tAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTgcg > 1:5658882/1‑93 (MQ=255)
aCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGa < 2:3268311/93‑1 (MQ=255)
aCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGa < 2:6544683/93‑1 (MQ=255)
aCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGa > 2:6863601/1‑93 (MQ=255)
cGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAg > 2:4890572/1‑93 (MQ=255)
cccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGcc > 1:790579/1‑93 (MQ=255)
ccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGccc > 2:6085123/1‑93 (MQ=255)
ccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGccc > 2:5510638/1‑93 (MQ=255)
ccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGccc < 1:4984607/93‑1 (MQ=255)
cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg < 2:7087821/93‑1 (MQ=255)
cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg > 1:2349057/1‑93 (MQ=255)
cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg > 1:3251413/1‑93 (MQ=255)
cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg > 2:4080898/1‑93 (MQ=255)
aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg > 2:1967014/1‑93 (MQ=255)
aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg < 1:3025274/93‑1 (MQ=255)
tCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGc > 2:867597/1‑93 (MQ=255)
tCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGc > 1:4724668/1‑93 (MQ=255)
ttCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAt < 1:5101290/93‑1 (MQ=255)
cGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAc < 2:7295845/93‑1 (MQ=255)
cGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAc > 2:2037268/1‑93 (MQ=255)
gTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACt > 2:3862878/1‑93 (MQ=255)
acaAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGAc < 2:3002182/93‑1 (MQ=255)
caAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACt < 2:6752612/93‑1 (MQ=255)
aaGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACtt > 2:1620967/1‑93 (MQ=255)
gCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtca > 2:3471116/1‑93 (MQ=255)
cGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcat < 2:4911802/93‑1 (MQ=255)
gATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatc > 2:2587423/1‑93 (MQ=255)
gATATATTGCGGGTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCACGGCATACTGACTtcatc > 2:5260741/1‑93 (MQ=255)
atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca > 2:1066874/1‑93 (MQ=255)
atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca < 2:4438907/93‑1 (MQ=255)
atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca > 1:1734499/1‑93 (MQ=255)
atatatTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAGACTGACTtcatac > 1:4188276/1‑91 (MQ=255)
tatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCac > 1:7507736/1‑93 (MQ=255)
tatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCac > 1:588521/1‑93 (MQ=255)
tatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCac < 2:5302894/93‑1 (MQ=255)
tatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCac < 1:2673432/93‑1 (MQ=255)
tatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacga > 2:555876/1‑93 (MQ=255)
tatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacga < 1:4524327/93‑1 (MQ=255)
atTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacgac > 2:5828576/1‑93 (MQ=255)
ttGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacgacg > 1:7644859/1‑93 (MQ=255)
gCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGAt < 2:2332860/93‑1 (MQ=255)
cGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATa > 1:6689841/1‑93 (MQ=255)
ttGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAcgc < 2:7568308/93‑1 (MQ=255)
tGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAcgcg > 1:195485/1‑93 (MQ=255)
aaCATTGAGCTCAAACTCGACCCCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCa < 1:1116970/93‑1 (MQ=255)
cATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAgg > 1:3530300/1‑93 (MQ=255)
cATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAgg < 2:5778628/93‑1 (MQ=255)
aTTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGt < 1:2544218/93‑1 (MQ=255)
ttGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTc < 2:2528333/93‑1 (MQ=255)
ttGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTc < 2:6371021/93‑1 (MQ=255)
tGAGCTGAAGCTCGACGCCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCa < 2:1523568/93‑1 (MQ=255)
tGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCa > 2:2163771/1‑93 (MQ=255)
|
GCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCA > NC_000913/3027340‑3027519
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCT > NC_000913/3027337‑3027523
|
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG > SRR4302543.525922/1‑94 (MQ=60)
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG < SRR4302543.5181187/94‑1 (MQ=60)
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG < SRR4302543.2676121/94‑1 (MQ=60)
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG < SRR4302543.1398260/94‑1 (MQ=60)
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG < SRR4302543.1398261/94‑1 (MQ=60)
GGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCT < SRR4302543.6640501/94‑1 (MQ=60)
GGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCT < SRR4302543.5287765/94‑1 (MQ=60)
GGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCT < SRR4302543.4365317/94‑1 (MQ=60)
GCGCCGGCTCACCCATGGCGGTACGAATCAGGCCCTCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTTAACATTGAGCTG < SRR4302543.7152447/94‑1 (MQ=60)
GCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTG < SRR4302543.4235814/94‑1 (MQ=60)
CCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGA > SRR4302543.5113819/1‑94 (MQ=60)
CCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGA > SRR4302543.7067137/1‑94 (MQ=60)
CCCGGCTCCCCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGCCACAAGCGATATATTGCGGTTGAACATTGAGCTGAA < SRR4302543.1370704/94‑1 (MQ=60)
CCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAA > SRR4302543.265469/1‑94 (MQ=60)
CCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAA < SRR4302543.4091975/94‑1 (MQ=60)
cgtGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAA < SRR4302543.2993785/91‑1 (MQ=60)
CCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAA > SRR4302543.6653047/1‑94 (MQ=60)
CCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAA > SRR4302543.6024592/1‑94 (MQ=60)
CCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAA > SRR4302543.3216250/1‑94 (MQ=60)
GGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACT < SRR4302543.2493814/94‑1 (MQ=60)
GCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTGGAACATTGAGCTGAAACTC > SRR4302543.7102516/1‑94 (MQ=60)
CTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCG > SRR4302543.6688062/1‑94 (MQ=60)
CTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCG > SRR4302543.1358601/1‑94 (MQ=60)
CACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGAC > SRR4302543.265458/1‑94 (MQ=60)
CACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGAC > SRR4302543.683735/1‑94 (MQ=60)
CCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACAC > SRR4302543.5915691/1‑94 (MQ=60)
CCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACC > SRR4302543.5520824/1‑94 (MQ=60)
CATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCT < SRR4302543.501097/94‑1 (MQ=60)
ATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTT < SRR4302543.6674419/94‑1 (MQ=60)
ATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTT > SRR4302543.415915/1‑94 (MQ=60)
ATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTT > SRR4302543.553964/1‑94 (MQ=60)
TGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTC > SRR4302543.8788/1‑94 (MQ=60)
gactGTACGAATCAGGCCCACCCCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCC < SRR4302543.176121/90‑1 (MQ=60)
GGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCC < SRR4302543.5391707/94‑1 (MQ=60)
GGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCC < SRR4302543.5114435/94‑1 (MQ=60)
CGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTC < SRR4302543.5811291/94‑1 (MQ=60)
CGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTC < SRR4302543.6884501/94‑1 (MQ=60)
GGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCG < SRR4302543.4028444/94‑1 (MQ=60)
GGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCG > SRR4302543.7656998/1‑94 (MQ=60)
GGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCG < SRR4302543.7381790/94‑1 (MQ=60)
GTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACCTTGAGCTGAAACTCGACACCTTCCTCGC > SRR4302543.4392751/1‑94 (MQ=60)
GTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGC > SRR4302543.7033624/1‑94 (MQ=60)
GTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGC < SRR4302543.1191565/94‑1 (MQ=60)
GTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGC < SRR4302543.3904506/94‑1 (MQ=60)
CGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCG > SRR4302543.6385088/1‑94 (MQ=60)
CGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCG > SRR4302543.3232773/1‑94 (MQ=60)
CGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCG < SRR4302543.535657/94‑1 (MQ=60)
GAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGC > SRR4302543.5073970/1‑94 (MQ=60)
AATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCA > SRR4302543.2124991/1‑94 (MQ=60)
ATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCAT > SRR4302543.6107231/1‑94 (MQ=60)
ACAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATT < SRR4302543.2830305/94‑1 (MQ=60)
CAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCTTTA > SRR4302543.6305664/1‑94 (MQ=60)
CAGGCCCACCGCAGTGAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTA < SRR4302543.222348/94‑1 (MQ=60)
AGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAA > SRR4302543.5078866/1‑94 (MQ=60)
AGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAA > SRR4302543.4845222/1‑94 (MQ=60)
GGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAAC > SRR4302543.7977186/1‑94 (MQ=60)
GGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTAGACACCTTCCTCGCGCGCATTAAC > SRR4302543.57228/1‑94 (MQ=60)
GCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACC < SRR4302543.7779854/94‑1 (MQ=60)
CCACCGCAGTTAAACGCCCATCTTCGTCGCAAGCGATATATTGCGGTTGAACATTGAGCTGAACCTCGACAACTTCCTCGCGCGCATTAACCAC < SRR4302543.1421284/94‑1 (MQ=60)
CCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCAC > SRR4302543.7615380/1‑94 (MQ=60)
CCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCAC > SRR4302543.7595809/1‑94 (MQ=60)
CCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCAC < SRR4302543.1421285/94‑1 (MQ=60)
CACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACC > SRR4302543.7293848/1‑94 (MQ=60)
CACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACC < SRR4302543.6615946/94‑1 (MQ=60)
CACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACC > SRR4302543.874647/1‑94 (MQ=60)
CACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACC < SRR4302543.2768902/94‑1 (MQ=60)
ACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTAAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCT > SRR4302543.3006918/1‑94 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT < SRR4302543.13209/94‑1 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT > SRR4302543.187806/1‑94 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT < SRR4302543.2002306/94‑1 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG > SRR4302543.7666907/1‑94 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG > SRR4302543.2520136/1‑94 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG < SRR4302543.1258273/94‑1 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG < SRR4302543.1204102/94‑1 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG < SRR4302543.1809411/94‑1 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG < SRR4302543.1193106/94‑1 (MQ=60)
GTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGC < SRR4302543.6465535/94‑1 (MQ=60)
GTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGC > SRR4302543.1668014/1‑94 (MQ=60)
GTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGC < SRR4302543.6668532/94‑1 (MQ=60)
TTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCG > SRR4302543.5710494/1‑94 (MQ=60)
TAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTCACCACCTCTTTGCGC > SRR4302543.4492903/1‑94 (MQ=60)
TAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGC > SRR4302543.28189/1‑94 (MQ=60)
ACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAG > SRR4302543.4792629/1‑94 (MQ=60)
ACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAG < SRR4302543.3182564/94‑1 (MQ=60)
GCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCC > SRR4302543.4653763/1‑94 (MQ=60)
GCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCC > SRR4302543.797527/1‑94 (MQ=60)
CCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCC < SRR4302543.1986583/94‑1 (MQ=60)
CCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCC < SRR4302543.2307749/94‑1 (MQ=60)
CCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCC > SRR4302543.906530/1‑94 (MQ=60)
CCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCC < SRR4302543.2644830/94‑1 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG > SRR4302543.2370358/1‑94 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG > SRR4302543.809177/1‑94 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG > SRR4302543.3280805/1‑94 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG > SRR4302543.6231633/1‑94 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG < SRR4302543.7757490/94‑1 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG < SRR4302543.5029977/94‑1 (MQ=60)
CATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGG > SRR4302543.2129504/1‑94 (MQ=60)
CATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGG < SRR4302543.5570615/94‑1 (MQ=60)
gttTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAACCTCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTGCGCGAGCCCGGC < SRR4302543.4431926/91‑1 (MQ=60)
ATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGC > SRR4302543.4767838/1‑94 (MQ=60)
ATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGC > SRR4302543.3406852/1‑94 (MQ=60)
ATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGC > SRR4302543.6751436/1‑94 (MQ=60)
ATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGC < SRR4302543.3052612/94‑1 (MQ=60)
TCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCA > SRR4302543.4224644/1‑94 (MQ=60)
CTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAT > SRR4302543.5868965/1‑94 (MQ=60)
CTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAT > SRR4302543.6285226/1‑94 (MQ=60)
CTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAT < SRR4302543.233005/94‑1 (MQ=60)
CTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAT < SRR4302543.2759327/94‑1 (MQ=60)
CTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAT < SRR4302543.6414371/94‑1 (MQ=60)
TTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATA > SRR4302543.3915754/1‑94 (MQ=60)
TTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATA < SRR4302543.5147473/94‑1 (MQ=60)
TTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATA < SRR4302543.5212929/94‑1 (MQ=60)
TCGTCACAAGCGATATATTGCGGTTGAACATTGTGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAC < SRR4302543.7725998/94‑1 (MQ=60)
TCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAC < SRR4302543.3518256/94‑1 (MQ=60)
GTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTG < SRR4302543.4162843/94‑1 (MQ=60)
GTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTG > SRR4302543.7019008/1‑94 (MQ=60)
CACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGAC > SRR4302543.3808608/1‑94 (MQ=60)
ACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACT < SRR4302543.7272291/94‑1 (MQ=60)
AAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTC > SRR4302543.1757232/1‑94 (MQ=60)
AAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTC > SRR4302543.2696165/1‑94 (MQ=60)
AAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTC < SRR4302543.2546902/94‑1 (MQ=60)
AGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCA > SRR4302543.6734592/1‑94 (MQ=60)
AGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCA < SRR4302543.5941441/94‑1 (MQ=60)
GCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCAT < SRR4302543.4587466/94‑1 (MQ=60)
GCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCAT < SRR4302543.3136716/94‑1 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA > SRR4302543.5161324/1‑94 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA < SRR4302543.5128141/94‑1 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA > SRR4302543.725101/1‑94 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA > SRR4302543.1749960/1‑94 (MQ=60)
GATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAGACTGACTTCATac > SRR4302543.4226248/1‑92 (MQ=60)
ATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCAC > SRR4302543.593904/1‑94 (MQ=60)
ATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCAC > SRR4302543.5418995/1‑94 (MQ=60)
ATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCAC > SRR4302543.7579484/1‑94 (MQ=60)
TATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACG > SRR4302543.6603762/1‑94 (MQ=60)
TATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACG < SRR4302543.2697669/94‑1 (MQ=60)
TATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACG > SRR4302543.7690560/1‑94 (MQ=60)
ATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGA < SRR4302543.3677545/94‑1 (MQ=60)
TATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGAC < SRR4302543.4395831/94‑1 (MQ=60)
TATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGAC < SRR4302543.4565486/94‑1 (MQ=60)
TATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGAC > SRR4302543.2212287/1‑94 (MQ=60)
TATTGCGGTTGAACATTGAGCTGAAACTAGACACCTTCCTCGCGTGACTTAACCATCTCTTTGCGCGggcacggcatcttactttactaccgcc > SRR4302543.2212288/1‑67 (MQ=38)
ATTGCGGTTGAACATTGAGCTGAAACTCGACTCCTCCCTCGCGCTCATTCACCTCCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACG < SRR4302543.6493044/94‑1 (MQ=60)
ATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACG > SRR4302543.7717358/1‑94 (MQ=60)
ATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACG < SRR4302543.4904408/94‑1 (MQ=60)
ATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACG > SRR4302543.3229297/1‑94 (MQ=60)
ATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACG > SRR4302543.2721640/1‑94 (MQ=60)
GCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATA > SRR4302543.6752991/1‑94 (MQ=60)
GCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATA < SRR4302543.4314384/94‑1 (MQ=60)
ggtgaAACATTGAGCTGAAACTCGCCACCTTCGTCGCTCGCATGAAGCCCCTCTTAGCGCGAGCCCGGCATACTGACTTCATCACGACGATACG < SRR4302543.3296925/89‑1 (MQ=55)
GTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGC > SRR4302543.4797587/1‑94 (MQ=60)
TTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCG > SRR4302543.197134/1‑94 (MQ=60)
AACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAG < SRR4302543.7878900/94‑1 (MQ=60)
AACATTGAGCTCAAACTCGACCCCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAG < SRR4302543.1127084/94‑1 (MQ=60)
ACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGG > SRR4302543.3561743/1‑94 (MQ=60)
ACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGG > SRR4302543.194444/1‑94 (MQ=60)
ACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACCGACTTCATCACGACGATACGCGCAGG > SRR4302543.567736/1‑94 (MQ=60)
CATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCGTACTGACTTCATCACGACGATACCCGCAGGC > SRR4302543.7541356/1‑94 (MQ=60)
ATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTC > SRR4302543.1141368/1‑94 (MQ=60)
ATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTC > SRR4302543.2637730/1‑94 (MQ=60)
ATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTC < SRR4302543.2567422/94‑1 (MQ=60)
ATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACCGACTTCATCACGCCGATACGCGCAGATC > SRR4302543.2805883/1‑94 (MQ=60)
TGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCAC < SRR4302543.5724159/94‑1 (MQ=60)
TGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCAC > SRR4302543.462822/1‑94 (MQ=60)
TGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCAC > SRR4302543.3449083/1‑94 (MQ=60)
GAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACG > SRR4302543.5079598/1‑94 (MQ=60)
GAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACG < SRR4302543.473157/94‑1 (MQ=60)
AGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGC > SRR4302543.3480431/1‑94 (MQ=60)
GCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCT > SRR4302543.223074/1‑94 (MQ=60)
GCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCT > SRR4302543.223073/1‑94 (MQ=60)
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CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCT > NC_000913/3027337‑3027523
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
