Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,027,430 |
A→G |
F513L (TTC→CTC) |
ygfT ← |
putative oxidoreductase Fe‑S subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,027,430 | 0 | A | G | 98.8%
| 532.7
/ ‑2.9
| 170 | F513L (TTC→CTC) | ygfT | putative oxidoreductase Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (100/68); total (101/69) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01 |
Only 100 of 177 total aligned reads displayed.
GCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCA > NC_000913/3027340‑3027519
|
gCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACt < 2:2765492/93‑1 (MQ=255)
gCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGATAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCt > 1:2510020/1‑93 (MQ=255)
cccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGa > 2:2476041/1‑93 (MQ=255)
cccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGa < 1:2857818/93‑1 (MQ=255)
ccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaa > 2:3031493/1‑93 (MQ=255)
ccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaa > 1:341811/1‑93 (MQ=255)
cGGCTCGCCCATGGCGGTACGAAACAGGCCCACCGCAATTAAACGCCCATTTTAGTCCCAAGGGATATATTGCGGTTGAACATTGAGCTGaaa < 1:3471851/93‑1 (MQ=255)
cGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaaa < 1:3584612/93‑1 (MQ=255)
cGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaaa < 2:757299/93‑1 (MQ=255)
cTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTc > 2:2900414/1‑93 (MQ=255)
cTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTc < 1:557530/93‑1 (MQ=255)
tCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCg > 1:3972385/1‑93 (MQ=255)
ccATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGacac > 2:1332387/1‑93 (MQ=255)
cATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACAcc < 2:1705746/93‑1 (MQ=255)
aTGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCt < 2:3864645/93‑1 (MQ=255)
gCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTcc < 1:3481353/93‑1 (MQ=255)
ggTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTc < 2:2853128/93‑1 (MQ=255)
gTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTcg > 2:2683256/1‑93 (MQ=255)
aaTCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCgcgcgc < 1:2778850/93‑1 (MQ=255)
aTCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCa > 2:4182799/1‑93 (MQ=255)
tCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCgcgcgctt > 2:1435957/1‑91 (MQ=255)
tCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCAt > 1:1120647/1‑93 (MQ=255)
aGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTa < 2:2953378/93‑1 (MQ=255)
ggCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTaa < 2:3346130/93‑1 (MQ=255)
cccACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAacc < 1:2910308/93‑1 (MQ=255)
cccACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAacc > 2:2003473/1‑93 (MQ=255)
cACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccac > 2:864700/1‑93 (MQ=255)
cccGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc < 1:142607/92‑1 (MQ=255)
aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc < 1:4022412/93‑1 (MQ=255)
aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc > 2:1063165/1‑93 (MQ=255)
aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc > 1:865141/1‑93 (MQ=255)
cGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACctc < 2:957252/93‑1 (MQ=255)
cGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACctc < 1:3219217/93‑1 (MQ=255)
cGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACctc > 1:1786931/1‑93 (MQ=255)
cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt < 1:1693782/93‑1 (MQ=255)
cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt < 1:3208825/93‑1 (MQ=255)
cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt < 1:2548744/93‑1 (MQ=255)
cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt < 1:2446876/93‑1 (MQ=255)
aGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCttt < 2:190850/93‑1 (MQ=255)
gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg > 2:3877269/1‑93 (MQ=255)
gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg > 2:4499057/1‑93 (MQ=255)
gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg > 2:160560/1‑93 (MQ=255)
ttAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTgc < 1:3785761/93‑1 (MQ=255)
aaaCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTgcgc < 1:1878884/93‑1 (MQ=255)
aaaCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACCCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTgcgc < 1:3089152/93‑1 (MQ=255)
aaCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGcgcg < 1:4201052/93‑1 (MQ=255)
cccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGcc > 1:3079154/1‑93 (MQ=255)
cccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTATTTGCGCGAgtc > 2:3508853/1‑91 (MQ=255)
ccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTT‑CTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg > 1:1188196/1‑93 (MQ=255)
cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg > 2:2345721/1‑93 (MQ=255)
cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg > 2:2054227/1‑93 (MQ=255)
cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg > 1:1398400/1‑93 (MQ=255)
aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg > 2:3240892/1‑93 (MQ=255)
aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg > 1:2202560/1‑93 (MQ=255)
aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg < 1:1932556/93‑1 (MQ=255)
tCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGc > 2:972297/1‑93 (MQ=255)
tCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGc > 2:3719113/1‑93 (MQ=255)
tgtCGTCACAAGCGATATATTGCGGTTGACCATTGAGCTGAACCTCGACCCCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCa < 2:1808863/91‑1 (MQ=255)
cTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCa > 2:2043625/1‑93 (MQ=255)
ttCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAt > 1:4653783/1‑93 (MQ=255)
cGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAc < 1:1260358/93‑1 (MQ=255)
cGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAc < 2:347403/93‑1 (MQ=255)
gTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACt < 1:600266/93‑1 (MQ=255)
gTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACt > 2:3026284/1‑93 (MQ=255)
tCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTg > 2:3529884/1‑93 (MQ=255)
tCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTg > 2:607670/1‑93 (MQ=255)
cacaAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGa < 1:2188751/93‑1 (MQ=255)
cacaAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTAGCGCGAGCCCGGCATACTGa > 1:3128053/1‑93 (MQ=255)
acaAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGAc < 2:1574703/93‑1 (MQ=255)
caAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACt > 1:4018089/1‑93 (MQ=255)
caAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACt > 2:4113188/1‑93 (MQ=255)
caAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACt > 2:2106824/1‑93 (MQ=255)
aaGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACtt > 1:3641537/1‑93 (MQ=255)
aGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtc > 1:4476298/1‑93 (MQ=255)
aGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtc > 1:2642951/1‑93 (MQ=255)
gCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtca < 1:1785070/93‑1 (MQ=255)
gATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatc > 2:2364545/1‑93 (MQ=255)
gATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatc > 1:1480901/1‑93 (MQ=255)
atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCTCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca > 2:1964704/1‑93 (MQ=255)
atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca > 1:2029351/1‑93 (MQ=255)
atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca > 1:3327377/1‑93 (MQ=255)
tatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacga < 1:1203103/93‑1 (MQ=255)
tatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacga > 2:4349347/1‑93 (MQ=255)
atTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGGGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacgac > 2:501753/1‑93 (MQ=255)
ggTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAc > 1:4660836/1‑93 (MQ=255)
ggTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAc < 1:905506/93‑1 (MQ=255)
gTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAcg > 2:2266014/1‑93 (MQ=255)
gAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACgcgc > 2:1794957/1‑93 (MQ=255)
aaCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCa < 1:3227736/93‑1 (MQ=255)
aaCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCa < 2:4261078/93‑1 (MQ=255)
aaCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCa < 2:3714514/93‑1 (MQ=255)
aCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAg > 2:1153662/1‑93 (MQ=255)
aCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAg > 2:649031/1‑93 (MQ=255)
cATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAgg > 1:2384644/1‑93 (MQ=255)
cATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAgg > 2:3980340/1‑93 (MQ=255)
aTTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGt > 1:3527135/1‑93 (MQ=255)
aTTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGt < 1:3320720/93‑1 (MQ=255)
aTTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGt > 2:3424438/1‑93 (MQ=255)
ttGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTc > 2:3516727/1‑93 (MQ=255)
tGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCa > 2:76770/1‑93 (MQ=255)
|
GCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCA > NC_000913/3027340‑3027519
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGC > NC_000913/3027337‑3027522
|
CCGGCCCCGGCTCTCCCATGGCGGTACGAATCAGGCACACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG < SRR4302535.1307934/94‑1 (MQ=60)
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG > SRR4302535.4227756/1‑94 (MQ=60)
CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAG < SRR4302535.4320054/94‑1 (MQ=60)
GGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCT < SRR4302535.844730/94‑1 (MQ=60)
GGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGATAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCT > SRR4302535.2528113/1‑94 (MQ=60)
CCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGTGCTGA > SRR4302535.1941120/1‑94 (MQ=60)
CCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAA < SRR4302535.2878065/94‑1 (MQ=60)
CCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAA > SRR4302535.344181/1‑94 (MQ=60)
CGGCTCGCCCATGGCGGTACGAAACAGGCCCACCGCAATTAAACGCCCATTTTAGTCCCAAGGGATATATTGCGGTTGAACATTGAGCTGAAAC < SRR4302535.3495975/94‑1 (MQ=60)
CGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAAC > SRR4302535.1478173/1‑94 (MQ=60)
CGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAAC < SRR4302535.3609471/94‑1 (MQ=60)
CTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCG < SRR4302535.561435/94‑1 (MQ=60)
CTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCG > SRR4302535.3076267/1‑94 (MQ=60)
CTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCG > SRR4302535.3999519/1‑94 (MQ=60)
CTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCG < SRR4302535.4081095/94‑1 (MQ=60)
CCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACC < SRR4302535.2496633/94‑1 (MQ=60)
TGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTC > SRR4302535.837491/1‑94 (MQ=60)
GCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCT < SRR4302535.3505533/94‑1 (MQ=60)
GTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGC > SRR4302535.1251766/1‑94 (MQ=60)
CGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCG > SRR4302535.3108344/1‑94 (MQ=60)
AATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCA < SRR4302535.2798636/94‑1 (MQ=60)
ATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCAT > SRR4302535.1128639/1‑94 (MQ=60)
CGGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACTCCTTCCTCGCGCGCATTA < SRR4302535.1635236/94‑1 (MQ=60)
CCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCA < SRR4302535.2930868/94‑1 (MQ=60)
CACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACC > SRR4302535.871255/1‑94 (MQ=60)
CACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACC > SRR4302535.3267166/1‑94 (MQ=60)
CCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCT < SRR4302535.143603/94‑1 (MQ=60)
ACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCT < SRR4302535.4049933/94‑1 (MQ=60)
CCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTC > SRR4302535.1799858/1‑94 (MQ=60)
CGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCT < SRR4302535.3241522/94‑1 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT > SRR4302535.3349815/1‑94 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT < SRR4302535.3243667/94‑1 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT < SRR4302535.3231052/94‑1 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT < SRR4302535.2464499/94‑1 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT < SRR4302535.2567086/94‑1 (MQ=60)
CAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTT < SRR4302535.1706032/94‑1 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG > SRR4302535.3525085/1‑94 (MQ=60)
AGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTG > SRR4302535.918156/1‑94 (MQ=60)
GTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTACTCGCGCGCATTAACCACCTCTTTGC > SRR4302535.3129307/1‑94 (MQ=60)
TTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCG < SRR4302535.3811875/94‑1 (MQ=60)
AAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCG < SRR4302535.1892422/94‑1 (MQ=60)
AAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACCCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTGCGCG < SRR4302535.3110667/94‑1 (MQ=60)
AACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGA < SRR4302535.4229800/94‑1 (MQ=60)
GCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCC > SRR4302535.3100627/1‑94 (MQ=60)
CCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTT‑CTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG > SRR4302535.1196704/1‑94 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG > SRR4302535.4418543/1‑94 (MQ=60)
CCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCG > SRR4302535.1408381/1‑94 (MQ=60)
CATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGG > SRR4302535.2218257/1‑94 (MQ=60)
ATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGC > SRR4302535.4512935/1‑94 (MQ=60)
ATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGC > SRR4302535.380876/1‑94 (MQ=60)
ATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGC < SRR4302535.1946478/94‑1 (MQ=60)
CTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAT > SRR4302535.4685289/1‑94 (MQ=60)
TTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGTGAGCCCGGCATA > SRR4302535.2704467/1‑94 (MQ=60)
CGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACT < SRR4302535.1269378/94‑1 (MQ=60)
CGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACT < SRR4302535.3501598/94‑1 (MQ=60)
GTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTG < SRR4302535.604466/94‑1 (MQ=60)
GTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTG < SRR4302535.3226798/94‑1 (MQ=60)
TCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTAGCGCGAGCCCGGCATACTGA > SRR4302535.3149837/1‑94 (MQ=60)
TCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTAGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTTA > SRR4302535.2432951/1‑94 (MQ=60)
CACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGAC < SRR4302535.2204338/94‑1 (MQ=60)
CACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGAC < SRR4302535.2576125/94‑1 (MQ=60)
ACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACT > SRR4302535.4045579/1‑94 (MQ=60)
CAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTT > SRR4302535.3666759/1‑94 (MQ=60)
CAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTT > SRR4302535.2065754/1‑94 (MQ=60)
AAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTC > SRR4302535.2661878/1‑94 (MQ=60)
AAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTC > SRR4302535.4507030/1‑94 (MQ=60)
AGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTGCGCGAGCCCGGCATACTGACTTCA < SRR4302535.3624751/94‑1 (MQ=60)
AGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCA > SRR4302535.1888486/1‑94 (MQ=60)
GCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCAT < SRR4302535.1797989/94‑1 (MQ=60)
CGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATC > SRR4302535.580972/1‑94 (MQ=60)
CGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATC > SRR4302535.1491493/1‑94 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA > SRR4302535.2043978/1‑94 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA > SRR4302535.3350529/1‑94 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA > SRR4302535.2043979/1‑94 (MQ=60)
GATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCA > SRR4302535.1721389/1‑94 (MQ=60)
ATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGA > SRR4302535.2868538/1‑94 (MQ=60)
TATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGAC < SRR4302535.1211740/94‑1 (MQ=60)
TATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGAC < SRR4302535.521724/94‑1 (MQ=60)
GCGGTTGACCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATA < SRR4302535.4041143/94‑1 (MQ=60)
CGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAC > SRR4302535.4692359/1‑94 (MQ=60)
GGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACG < SRR4302535.911932/94‑1 (MQ=60)
GGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACG > SRR4302535.1339429/1‑94 (MQ=60)
GTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGC > SRR4302535.2385760/1‑94 (MQ=60)
TTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCG < SRR4302535.3448903/94‑1 (MQ=60)
AACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAG > SRR4302535.1207351/1‑94 (MQ=60)
AACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAG < SRR4302535.3250106/94‑1 (MQ=60)
ACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGG > SRR4302535.2401770/1‑94 (MQ=60)
CATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGT > SRR4302535.3551628/1‑94 (MQ=60)
ATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTC < SRR4302535.3343826/94‑1 (MQ=60)
TGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCAC < SRR4302535.3947908/94‑1 (MQ=60)
TGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCAC > SRR4302535.2067229/1‑94 (MQ=60)
TGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCAC > SRR4302535.1601243/1‑94 (MQ=60)
AGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGC > SRR4302535.1789652/1‑94 (MQ=60)
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CCGGCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGC > NC_000913/3027337‑3027522
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
