Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,036,938 |
T→C |
T276A (ACG→GCG) |
xerD ← |
XerD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,036,938 | 0 | T | C | 100.0%
| 482.4
/ NA
| 155 | T276A (ACG→GCG) | xerD | XerD |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (76/79); total (76/79) |
Only 100 of 177 total aligned reads displayed.
TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAC > NC_000913/3036848‑3037024
|
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg > 1:2891617/1‑93 (MQ=255)
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg > 2:4146209/1‑93 (MQ=255)
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg > 1:2988392/1‑93 (MQ=255)
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg > 1:1790780/1‑93 (MQ=255)
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGCTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg > 1:2482795/1‑93 (MQ=255)
tCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcggt < 1:49918/93‑1 (MQ=255)
tCCCGTTCTTGTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcggt < 2:2702156/93‑1 (MQ=255)
cccGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcggtg > 2:1101210/1‑93 (MQ=255)
ccGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGcggtgg > 1:933474/1‑93 (MQ=255)
ccGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGcggtgg > 2:3983565/1‑93 (MQ=255)
ccGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGcggtgg > 2:4533670/1‑93 (MQ=255)
gTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgag > 2:1984464/1‑93 (MQ=255)
ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga > 2:1684843/1‑93 (MQ=255)
ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga > 2:1569106/1‑93 (MQ=255)
ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga > 2:1495989/1‑93 (MQ=255)
ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga > 1:3395555/1‑93 (MQ=255)
ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga > 1:2769565/1‑93 (MQ=255)
ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga > 1:1328290/1‑93 (MQ=255)
tCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagag > 1:4582240/1‑93 (MQ=255)
cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga < 1:2240246/93‑1 (MQ=255)
cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga > 1:2520126/1‑93 (MQ=255)
cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga < 1:3345695/93‑1 (MQ=255)
ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt < 2:896902/93‑1 (MQ=255)
tttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATc < 1:2580583/93‑1 (MQ=255)
tCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGc > 1:1362144/1‑93 (MQ=255)
cAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCt > 2:528022/1‑93 (MQ=255)
gACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgt > 1:3723521/1‑93 (MQ=255)
gACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgt > 2:554147/1‑93 (MQ=255)
gACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgt < 2:2502853/93‑1 (MQ=255)
aCATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgtg > 1:1068857/1‑93 (MQ=255)
aCATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgtg > 2:3522769/1‑93 (MQ=255)
cATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTgg > 2:4675820/1‑93 (MQ=255)
tCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGcc > 1:4270631/1‑93 (MQ=255)
cccGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTa < 2:1669397/93‑1 (MQ=255)
cccGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTa < 2:3535527/93‑1 (MQ=255)
cgcgGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGc < 2:3111231/93‑1 (MQ=255)
gcgGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCa < 1:360169/93‑1 (MQ=255)
gcgGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCa < 1:2309494/93‑1 (MQ=255)
gATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGca > 2:1874382/1‑93 (MQ=255)
aTGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcac < 2:1834969/93‑1 (MQ=255)
aTGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcac < 1:2394898/93‑1 (MQ=255)
tGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcacc > 2:871760/1‑93 (MQ=255)
tGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcacc > 2:146617/1‑93 (MQ=255)
tGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcacc < 1:1259762/93‑1 (MQ=255)
gCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcacca > 1:340560/1‑93 (MQ=255)
cTGTTGATGAGGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGTAGAGATCGCTGTGGCCCAGTAGCATCTGccccac < 2:3809176/93‑1 (MQ=255)
cTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcaccac < 2:3705779/93‑1 (MQ=255)
gTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgc < 1:4530563/93‑1 (MQ=255)
gTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgc < 2:3881056/93‑1 (MQ=255)
gTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgc > 1:3980553/1‑93 (MQ=255)
gatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTa < 1:3220412/93‑1 (MQ=255)
tgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTaaa > 2:2118579/1‑93 (MQ=255)
tgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTaaa < 1:2507724/93‑1 (MQ=255)
tgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTaaa < 1:3659268/93‑1 (MQ=255)
gaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAt > 2:4404063/1‑93 (MQ=255)
gaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAt < 2:1919779/93‑1 (MQ=255)
aaGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATc < 1:1950/93‑1 (MQ=255)
aaGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATc < 2:4096758/93‑1 (MQ=255)
aGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGTGATCTCGCTGTGGCCCGGCAGGATCTGGACCACGCGTAAAttc > 2:1912300/1‑91 (MQ=255)
aGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATcc < 2:4488050/93‑1 (MQ=255)
gTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCg < 2:3050167/93‑1 (MQ=255)
ttGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGc > 2:3498733/1‑93 (MQ=255)
tGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCa < 1:4353328/93‑1 (MQ=255)
cGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATACGCACCa > 2:2665108/1‑93 (MQ=255)
gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCAt > 2:3603375/1‑93 (MQ=255)
gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCAt < 1:1691371/93‑1 (MQ=255)
gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAt < 1:1026693/93‑1 (MQ=255)
cTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaa < 1:3795485/93‑1 (MQ=255)
cTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGACCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaa < 2:3251281/93‑1 (MQ=255)
tCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaat > 1:1917260/1‑93 (MQ=255)
gTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATaaa < 2:2542209/93‑1 (MQ=255)
gTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATaaa < 1:3919610/93‑1 (MQ=255)
gTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATaaa < 1:833834/93‑1 (MQ=255)
gTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATaaa > 2:2823681/1‑93 (MQ=255)
tAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAt < 2:2108539/93‑1 (MQ=255)
aGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATg < 1:2067513/93‑1 (MQ=255)
gCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGa < 2:1730330/93‑1 (MQ=255)
gCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGa > 2:4376679/1‑93 (MQ=255)
cGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAg < 2:4233364/93‑1 (MQ=255)
cGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAg < 1:4527908/93‑1 (MQ=255)
gACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGGAAATCCGCACCATGATTTAATAAATGAGt > 1:3272961/1‑93 (MQ=255)
aCATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAggg < 2:2048946/93‑3 (MQ=255)
aCATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTg < 1:279645/93‑1 (MQ=255)
aTGCGAATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGc > 2:3853449/1‑93 (MQ=255)
tGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCa > 1:2967094/1‑93 (MQ=255)
tGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCa > 1:1744205/1‑93 (MQ=255)
gTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCaaaa > 1:997043/1‑93 (MQ=255)
tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg > 2:44862/1‑93 (MQ=255)
tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg > 2:1400512/1‑93 (MQ=255)
ataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGc < 1:2178073/93‑1 (MQ=255)
ataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGc > 1:3798002/1‑93 (MQ=255)
taAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCg > 1:4242334/1‑93 (MQ=255)
aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt < 1:4084261/93‑1 (MQ=255)
aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt < 1:3509697/93‑1 (MQ=255)
aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt < 2:715183/93‑1 (MQ=255)
aaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTg > 2:4173283/1‑93 (MQ=255)
aTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGa < 1:4238465/93‑1 (MQ=255)
tttGCGCTGTGGAGATATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAc < 2:1247048/93‑1 (MQ=255)
tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAc > 1:2049201/1‑93 (MQ=255)
tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAc > 2:329661/1‑93 (MQ=255)
|
TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAC > NC_000913/3036848‑3037024
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACA > NC_000913/3036845‑3037030
|
ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGC > SRR4302535.2671030/1‑94 (MQ=60)
CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGG > SRR4302535.3009346/1‑94 (MQ=60)
CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGG > SRR4302535.2912075/1‑94 (MQ=60)
CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGG > SRR4302535.1803729/1‑94 (MQ=60)
CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGCTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGG > SRR4302535.2500697/1‑94 (MQ=60)
TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGT < SRR4302535.3371757/94‑1 (MQ=60)
TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGT > SRR4302535.622020/1‑94 (MQ=60)
TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGT > SRR4302535.4468003/1‑94 (MQ=60)
TCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTG < SRR4302535.50288/94‑1 (MQ=60)
CCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGG > SRR4302535.940078/1‑94 (MQ=60)
CCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGA > SRR4302535.461065/1‑94 (MQ=60)
GTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGA > SRR4302535.3673485/1‑94 (MQ=60)
GTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGA > SRR4302535.1337768/1‑94 (MQ=60)
GTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGA > SRR4302535.3419179/1‑94 (MQ=60)
GTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGA > SRR4302535.2789286/1‑94 (MQ=60)
TTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAG > SRR4302535.4613447/1‑94 (MQ=60)
TTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAG > SRR4302535.1360872/1‑94 (MQ=60)
TCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGA > SRR4302535.2538288/1‑94 (MQ=60)
CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT < SRR4302535.3369000/94‑1 (MQ=60)
CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT < SRR4302535.2256181/94‑1 (MQ=60)
CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT > SRR4302535.3447681/1‑94 (MQ=60)
TTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATC < SRR4302535.2521207/94‑1 (MQ=60)
TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG > SRR4302535.2801913/1‑94 (MQ=60)
TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG < SRR4302535.2599122/94‑1 (MQ=60)
TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG < SRR4302535.1749302/94‑1 (MQ=60)
TTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGC > SRR4302535.1371887/1‑94 (MQ=60)
CAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTG > SRR4302535.3991755/1‑94 (MQ=60)
AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT > SRR4302535.3749315/1‑94 (MQ=60)
AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGGAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT > SRR4302535.4104295/1‑94 (MQ=60)
GACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTG < SRR4302535.2232635/94‑1 (MQ=60)
GACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTG > SRR4302535.1076455/1‑94 (MQ=60)
ACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGG > SRR4302535.2050147/1‑94 (MQ=60)
ATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCC > SRR4302535.4299867/1‑94 (MQ=60)
CCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGC < SRR4302535.1193524/94‑1 (MQ=60)
GCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCAT > SRR4302535.960042/1‑94 (MQ=60)
GCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCAT < SRR4302535.362661/94‑1 (MQ=60)
GCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCAT < SRR4302535.2326024/94‑1 (MQ=60)
GGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCT < SRR4302535.2346698/94‑1 (MQ=60)
GGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATGTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTG < SRR4302535.1802190/94‑1 (MQ=60)
GTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGC > SRR4302535.2452393/1‑94 (MQ=60)
ATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACC < SRR4302535.2412110/94‑1 (MQ=60)
TGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCA > SRR4302535.342922/1‑94 (MQ=60)
TGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCA < SRR4302535.1268778/94‑1 (MQ=60)
TGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGC > SRR4302535.4007747/1‑94 (MQ=60)
GTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCG < SRR4302535.4561577/94‑1 (MQ=60)
TGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTA > SRR4302535.3736549/1‑94 (MQ=60)
GATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAA < SRR4302535.3242729/94‑1 (MQ=60)
TGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAT < SRR4302535.3684597/94‑1 (MQ=60)
TGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAT < SRR4302535.2525802/94‑1 (MQ=60)
GAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATC < SRR4302535.2992199/94‑1 (MQ=60)
GAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATC > SRR4302535.1925038/1‑94 (MQ=60)
AAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCC < SRR4302535.1969/94‑1 (MQ=60)
TGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCAC < SRR4302535.4383123/94‑1 (MQ=60)
GCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATG < SRR4302535.1703609/94‑1 (MQ=60)
AGACGCTCGGTAGCGACATGCGAATAAATATGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCAGCACCACGCGTAAATCCGCACCATGAT < SRR4302535.4711390/94‑1 (MQ=60)
GACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATT < SRR4302535.1033984/94‑1 (MQ=60)
ACGCTCGGTAGCGACATGCGGATAAGTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTT < SRR4302535.4292082/94‑1 (MQ=60)
CTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAAT > SRR4302535.1931075/1‑94 (MQ=60)
CTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAAT < SRR4302535.3821648/94‑1 (MQ=60)
TCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATA > SRR4302535.4375996/1‑94 (MQ=60)
CGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAA < SRR4302535.3800160/94‑1 (MQ=60)
GGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAA > SRR4302535.3261302/1‑94 (MQ=60)
GTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAT < SRR4302535.839679/94‑1 (MQ=60)
GTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAT < SRR4302535.3946415/94‑1 (MQ=60)
TAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATG < SRR4302535.265022/94‑1 (MQ=60)
AGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGA < SRR4302535.2082415/94‑1 (MQ=60)
CGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGT < SRR4302535.4169236/94‑1 (MQ=60)
CGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGT < SRR4302535.4558918/94‑1 (MQ=60)
CGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGT < SRR4302535.3828258/94‑1 (MQ=60)
CGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGGAAATCCGCACCATGATTTAATAAATGAGT > SRR4302535.3295695/1‑94 (MQ=60)
GACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTG < SRR4302535.2972394/94‑1 (MQ=60)
ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG < SRR4302535.3034178/94‑1 (MQ=60)
ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG < SRR4302535.281596/94‑1 (MQ=60)
CATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGC < SRR4302535.131036/94‑1 (MQ=60)
ATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCA > SRR4302535.1756824/1‑94 (MQ=60)
ATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCA > SRR4302535.2987912/1‑94 (MQ=60)
CGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAA > SRR4302535.1004121/1‑94 (MQ=60)
GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG > SRR4302535.254544/1‑94 (MQ=60)
GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG < SRR4302535.3423822/94‑1 (MQ=60)
GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG < SRR4302535.211663/94‑1 (MQ=60)
TATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGC > SRR4302535.3824186/1‑94 (MQ=60)
ATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCG < SRR4302535.2193629/94‑1 (MQ=60)
ATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCG > SRR4302535.4271372/1‑94 (MQ=60)
TAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGT < SRR4302535.2065795/94‑1 (MQ=60)
AAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG < SRR4302535.3534086/94‑1 (MQ=60)
AAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG < SRR4302535.4112188/94‑1 (MQ=60)
ATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAC > SRR4302535.2063954/1‑94 (MQ=60)
ATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAC < SRR4302535.4267483/94‑1 (MQ=60)
GCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACA < SRR4302535.1895734/94‑1 (MQ=60)
GCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACA < SRR4302535.1010857/94‑1 (MQ=60)
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ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAACA > NC_000913/3036845‑3037030
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
