Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,036,938 T→C T276A (ACG→GCG)  xerD ← XerD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,036,9380TC99.7% 891.2 / ‑5.2 288T276A (ACG→GCG) xerDXerD
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (146/141);  total (147/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.45e-01

Only 100 of 315 total aligned reads displayed.

TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGC  >  NC_000913/3036848‑3037026
                                                                                          |                                                                                        
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATACATTTGCgcgg                                                                                        >  1:7533795/1‑93 (MQ=255)
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg                                                                                        >  2:2549034/1‑93 (MQ=255)
ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg                                                                                        >  2:690565/1‑93 (MQ=255)
 tCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcggt                                                                                       <  2:3960124/93‑1 (MQ=255)
  cccGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcggtg                                                                                      <  1:3347990/93‑1 (MQ=255)
    cGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGga                                                                                    <  2:6853664/93‑1 (MQ=255)
    cGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGga                                                                                    <  2:5195493/93‑1 (MQ=255)
    cGTTCTTATCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGga                                                                                    <  1:4663527/93‑1 (MQ=255)
     gTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgag                                                                                   >  2:5248928/1‑93 (MQ=255)
      ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga                                                                                  >  2:7863481/1‑93 (MQ=255)
      ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga                                                                                  >  2:1626538/1‑93 (MQ=255)
      ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga                                                                                  <  2:2194721/93‑1 (MQ=255)
       tCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagag                                                                                 >  1:2518219/1‑93 (MQ=255)
        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                >  1:2175491/1‑93 (MQ=255)
        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                >  1:5696402/1‑93 (MQ=255)
        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                <  2:857306/93‑1 (MQ=255)
        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                <  2:4419972/93‑1 (MQ=255)
        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                <  2:4182618/93‑1 (MQ=255)
         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgcgaggt                                                                               >  2:3895757/1‑91 (MQ=255)
         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               >  1:6399582/1‑93 (MQ=255)
         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               >  1:6512355/1‑93 (MQ=255)
         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               >  2:1708704/1‑93 (MQ=255)
         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               <  1:2614527/93‑1 (MQ=255)
          tttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATc                                                                              >  2:2254/1‑93 (MQ=255)
          tttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATc                                                                              <  1:4464890/93‑1 (MQ=255)
           ttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCg                                                                             >  2:1601897/1‑93 (MQ=255)
              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:1051268/93‑1 (MQ=255)
              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:1611319/93‑1 (MQ=255)
              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:981200/93‑1 (MQ=255)
              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          >  2:6518631/1‑93 (MQ=255)
              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:3822297/93‑1 (MQ=255)
               gACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgt                                                                         <  2:7081109/93‑1 (MQ=255)
               gACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgt                                                                         <  1:1722229/93‑1 (MQ=255)
                aCATCACGCACGGGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgtg                                                                        <  1:3660096/93‑1 (MQ=255)
                   tCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGcc                                                                     >  2:3507935/1‑93 (MQ=255)
                   tCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGcc                                                                     >  2:2935974/1‑93 (MQ=255)
                      cGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAg                                                                  <  1:1378868/93‑1 (MQ=255)
                        cccGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTa                                                                >  1:5394747/1‑93 (MQ=255)
                             gggTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATc                                                           >  2:7669274/1‑93 (MQ=255)
                                tGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGc                                                        >  1:4564470/1‑93 (MQ=255)
                                 gATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcc                                                       >  1:4253978/1‑92 (MQ=255)
                                  aTGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcac                                                      <  1:70009/93‑1 (MQ=255)
                                   tGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcacc                                                     >  1:4155599/1‑93 (MQ=255)
                                     cTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcaccac                                                   <  1:4750522/93‑1 (MQ=255)
                                     cTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcaccac                                                   >  2:1568101/1‑93 (MQ=255)
                                     cTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcaccac                                                   <  1:3766421/93‑1 (MQ=255)
                                      tGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcg                                                  <  2:7356661/93‑1 (MQ=255)
                                      tGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcg                                                  >  1:6006192/1‑93 (MQ=255)
                                       gTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgc                                                 >  1:2927246/1‑93 (MQ=255)
                                        ttGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgcg                                                >  1:3043755/1‑93 (MQ=255)
                                         tgatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGt                                               >  2:3372730/1‑93 (MQ=255)
                                         tgatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGt                                               >  1:4955419/1‑93 (MQ=255)
                                         tgatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGt                                               >  1:7144682/1‑93 (MQ=255)
                                          gattaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTa                                              <  1:7289556/93‑1 (MQ=255)
                                          gatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTa                                              <  1:1951072/93‑1 (MQ=255)
                                           atgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTaa                                             >  2:4853020/1‑93 (MQ=255)
                                            tgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTaaa                                            >  1:5541901/1‑93 (MQ=255)
                                             gaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAt                                           <  1:623054/93‑1 (MQ=255)
                                              aaGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATc                                          <  2:5074632/93‑1 (MQ=255)
                                              aaGTTGCAGCAGACGCGCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATc                                          <  1:6740472/93‑1 (MQ=255)
                                                gTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCg                                        <  1:5822847/93‑1 (MQ=255)
                                                 ttGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGc                                       <  1:7935919/93‑1 (MQ=255)
                                                 ttGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGc                                       >  2:2753815/1‑93 (MQ=255)
                                                      gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCAt                                  >  1:2402656/1‑93 (MQ=255)
                                                      gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCAt                                  >  2:7183222/1‑93 (MQ=255)
                                                      gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAAGCGTAAATCCGCAccct                                  >  2:6432716/1‑91 (MQ=255)
                                                        aGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGa                                <  1:3239403/93‑1 (MQ=255)
                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          >  1:6122437/1‑50 (MQ=255)
                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  2:6122436/50‑1 (MQ=255)
                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAt                               <  2:1068142/93‑1 (MQ=255)
                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAt                               >  1:5213151/1‑93 (MQ=255)
                                                           cGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAttt                             >  1:2337513/1‑93 (MQ=255)
                                                           cGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAttt                             <  2:3292635/93‑1 (MQ=255)
                                                           cGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAttt                             <  1:626289/93‑1 (MQ=255)
                                                            gCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTta                            >  1:912660/1‑93 (MQ=255)
                                                             cTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaa                           <  1:1888283/93‑1 (MQ=255)
                                                              tCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaat                          <  2:4689463/93‑1 (MQ=255)
                                                                ggTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaataa                        <  2:5607232/93‑1 (MQ=255)
                                                                 gTAGCGACATGCGTATAAATGTGCGCGGTTGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATaaa                       <  1:5853482/93‑1 (MQ=255)
                                                                  tAGCGACATGCGTATAAATTTGCGCGGTGGAGTGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAt                      >  1:62214/1‑93 (MQ=255)
                                                                  tAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAt                      <  1:4986140/93‑1 (MQ=255)
                                                                   aGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATg                     <  2:1811031/93‑1 (MQ=255)
                                                                    gCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGa                    <  1:1219043/93‑1 (MQ=255)
                                                                        cATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTgg                >  1:7740470/1‑93 (MQ=255)
                                                                         aTGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGc               >  2:6242391/1‑93 (MQ=255)
                                                                          tGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCa              >  2:3824238/1‑93 (MQ=255)
                                                                          tGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCa              >  1:315500/1‑93 (MQ=255)
                                                                           gCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCaa             >  2:545559/1‑93 (MQ=255)
                                                                            cGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCaaa            >  2:665545/1‑93 (MQ=255)
                                                                              tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg          <  2:5824333/93‑1 (MQ=255)
                                                                              tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg          >  2:2643508/1‑93 (MQ=255)
                                                                              tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg          >  1:1491902/1‑93 (MQ=255)
                                                                               ttaAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGc         <  2:1328118/92‑1 (MQ=255)
                                                                                 aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt       <  1:28418/93‑1 (MQ=255)
                                                                                 aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt       <  1:4822633/93‑1 (MQ=255)
                                                                                 aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt       <  1:4015253/93‑1 (MQ=255)
                                                                                    tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGag    >  1:2765468/1‑92 (MQ=255)
                                                                                    tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAc    >  1:5065273/1‑93 (MQ=255)
                                                                                    tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAc    >  1:5378158/1‑93 (MQ=255)
                                                                                      tGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGc  >  1:3877707/1‑93 (MQ=255)
                                                                                          |                                                                                        
TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGC  >  NC_000913/3036848‑3037026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAAC  >  NC_000913/3036845‑3037029
                                                                                             |                                                                                           
ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGC                                                                                             >  SRR4302543.3660624/1‑94 (MQ=60)
ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGC                                                                                             >  SRR4302543.4214103/1‑94 (MQ=60)
ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGC                                                                                             <  SRR4302543.6630467/94‑1 (MQ=60)
 TCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCG                                                                                            >  SRR4302543.6649834/1‑94 (MQ=60)
 TCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCCACATGCGTATAAATTTGCGCG                                                                                            >  SRR4302543.5263676/1‑94 (MQ=60)
  CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATACATTTGCGCGG                                                                                           >  SRR4302543.7605631/1‑94 (MQ=60)
  CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGG                                                                                           >  SRR4302543.4107661/1‑94 (MQ=60)
  CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGG                                                                                           >  SRR4302543.4340478/1‑94 (MQ=60)
  CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGG                                                                                           >  SRR4302543.6184613/1‑94 (MQ=60)
  CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCAGCAGACGCTCGGTAGCGACAAGCGTATAAATTTGCGCGG                                                                                           >  SRR4302543.2848257/1‑94 (MQ=60)
  CTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGCTGCGGCATACGCTCGGGAGCGACACGCTTATAAATTTGCGCGG                                                                                           >  SRR4302543.5384314/1‑94 (MQ=60)
    TCCCGTTCTTTTCAGACATTACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTG                                                                                         >  SRR4302543.6078559/1‑94 (MQ=60)
    TCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTG                                                                                         <  SRR4302543.2477586/94‑1 (MQ=60)
    TCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTG                                                                                         <  SRR4302543.2570822/94‑1 (MQ=60)
     CCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGG                                                                                        <  SRR4302543.5890639/94‑1 (MQ=60)
     CCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGG                                                                                        <  SRR4302543.3378133/94‑1 (MQ=60)
     CCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGG                                                                                        >  SRR4302543.4768171/1‑94 (MQ=60)
      CCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGA                                                                                       >  SRR4302543.3548247/1‑94 (MQ=60)
       CGTTCTTATCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAG                                                                                      <  SRR4302543.4706025/94‑1 (MQ=60)
         TTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAG                                                                                    >  SRR4302543.2541097/1‑94 (MQ=60)
         TTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAG                                                                                    >  SRR4302543.506285/1‑94 (MQ=60)
         TTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAG                                                                                    >  SRR4302543.506283/1‑94 (MQ=60)
          TCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGA                                                                                   >  SRR4302543.5748372/1‑94 (MQ=60)
          TCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGA                                                                                   >  SRR4302543.2194983/1‑94 (MQ=60)
           CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT                                                                                  >  SRR4302543.5894180/1‑94 (MQ=60)
           CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT                                                                                  <  SRR4302543.80278/94‑1 (MQ=60)
           CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT                                                                                  >  SRR4302543.6573697/1‑94 (MQ=60)
           CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT                                                                                  >  SRR4302543.4827620/1‑94 (MQ=60)
           CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT                                                                                  >  SRR4302543.6459833/1‑94 (MQ=60)
           CTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAT                                                                                  <  SRR4302543.6405219/94‑1 (MQ=60)
            TTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATC                                                                                 <  SRR4302543.2638243/94‑1 (MQ=60)
            TTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATC                                                                                 <  SRR4302543.312507/94‑1 (MQ=60)
             TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG                                                                                <  SRR4302543.2573139/94‑1 (MQ=60)
             TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG                                                                                <  SRR4302543.986437/94‑1 (MQ=60)
             TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG                                                                                <  SRR4302543.4505358/94‑1 (MQ=60)
             TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG                                                                                <  SRR4302543.664244/94‑1 (MQ=60)
             TTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCG                                                                                <  SRR4302543.1100034/94‑1 (MQ=60)
              TTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGC                                                                               >  SRR4302543.1431512/1‑94 (MQ=60)
                CAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTG                                                                             <  SRR4302543.162921/94‑1 (MQ=60)
                CAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTG                                                                             <  SRR4302543.3143330/94‑1 (MQ=60)
                 AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT                                                                            <  SRR4302543.3856008/94‑1 (MQ=60)
                 AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT                                                                            <  SRR4302543.989859/94‑1 (MQ=60)
                 AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT                                                                            >  SRR4302543.2844808/1‑94 (MQ=60)
                 AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT                                                                            <  SRR4302543.1060680/94‑1 (MQ=60)
                 AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT                                                                            <  SRR4302543.1913567/94‑1 (MQ=60)
                 AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT                                                                            <  SRR4302543.2642762/94‑1 (MQ=60)
                 AGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGT                                                                            <  SRR4302543.1625694/94‑1 (MQ=60)
                  GACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTG                                                                           <  SRR4302543.4273236/94‑1 (MQ=60)
                  GACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTG                                                                           <  SRR4302543.7241442/94‑1 (MQ=60)
                  GACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTG                                                                           <  SRR4302543.3009619/94‑1 (MQ=60)
                  GACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTG                                                                           <  SRR4302543.1737588/94‑1 (MQ=60)
                   ACATCACGCACGGGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGG                                                                          <  SRR4302543.3692240/94‑1 (MQ=60)
                    CATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGC                                                                         >  SRR4302543.5133713/1‑94 (MQ=60)
                    CATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGC                                                                         >  SRR4302543.4610142/1‑94 (MQ=60)
                    CATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGC                                                                         >  SRR4302543.3197443/1‑94 (MQ=60)
                     ATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCC                                                                        >  SRR4302543.7071311/1‑94 (MQ=60)
                      TCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCC                                                                       >  SRR4302543.6288521/1‑94 (MQ=60)
                        ACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAG                                                                     >  SRR4302543.7454562/1‑94 (MQ=60)
                         CGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGT                                                                    <  SRR4302543.1391264/94‑1 (MQ=60)
                          GCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGATAGATCGCTGTGGCCCAGTA                                                                   >  SRR4302543.5812525/1‑94 (MQ=60)
                          GCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTA                                                                   <  SRR4302543.4603443/94‑1 (MQ=60)
                          GCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTA                                                                   <  SRR4302543.5435589/94‑1 (MQ=60)
                          GCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTA                                                                   <  SRR4302543.5435591/94‑1 (MQ=60)
                          GCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTA                                                                   >  SRR4302543.5443802/1‑94 (MQ=60)
                             CGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCA                                                                <  SRR4302543.400421/94‑1 (MQ=60)
                             CGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCA                                                                >  SRR4302543.4336127/1‑94 (MQ=60)
                              GCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCAT                                                               <  SRR4302543.1685453/94‑1 (MQ=60)
                               CGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATC                                                              >  SRR4302543.7057315/1‑94 (MQ=60)
                               CGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATC                                                              >  SRR4302543.2998723/1‑94 (MQ=60)
                                GGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCT                                                             >  SRR4302543.1265310/1‑94 (MQ=60)
                                GGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCT                                                             >  SRR4302543.4773654/1‑94 (MQ=60)
                                 GGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTG                                                            <  SRR4302543.1920612/94‑1 (MQ=60)
                                  GTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGC                                                           >  SRR4302543.4606007/1‑94 (MQ=60)
                                  GTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGC                                                           >  SRR4302543.1499161/1‑94 (MQ=60)
                                   TGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCC                                                          >  SRR4302543.4292592/1‑94 (MQ=60)
                                     ATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACC                                                        >  SRR4302543.4193176/1‑94 (MQ=60)
                                     ATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACC                                                        <  SRR4302543.70647/94‑1 (MQ=60)
                                     ATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACC                                                        >  SRR4302543.4193177/1‑94 (MQ=60)
                                       GCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAC                                                      >  SRR4302543.1521312/1‑94 (MQ=60)
                                       GCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAC                                                      <  SRR4302543.4485209/94‑1 (MQ=60)
                                       GCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAC                                                      <  SRR4302543.6516412/94‑1 (MQ=60)
                                        CTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACG                                                     <  SRR4302543.4793945/94‑1 (MQ=60)
                                        CTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACG                                                     >  SRR4302543.6061470/1‑94 (MQ=60)
                                        CTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACG                                                     >  SRR4302543.885411/1‑94 (MQ=60)
                                        CTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACG                                                     <  SRR4302543.3799575/94‑1 (MQ=60)
                                         TGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGC                                                    >  SRR4302543.2953837/1‑94 (MQ=60)
                                         TGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGC                                                    >  SRR4302543.2953836/1‑94 (MQ=60)
                                          GTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCG                                                   >  SRR4302543.3071200/1‑94 (MQ=60)
                                           TTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGT                                                  >  SRR4302543.7823928/1‑94 (MQ=60)
                                           TTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGT                                                  >  SRR4302543.7214113/1‑94 (MQ=60)
                                           TTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGT                                                  >  SRR4302543.5000543/1‑94 (MQ=60)
                                             GATTAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAA                                                <  SRR4302543.7359919/94‑1 (MQ=60)
                                             GATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAA                                                <  SRR4302543.1968569/94‑1 (MQ=60)
                                             GATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAA                                                <  SRR4302543.1090766/94‑1 (MQ=60)
                                              ATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAA                                               >  SRR4302543.5592289/1‑94 (MQ=60)
                                              ATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAA                                               <  SRR4302543.7462971/94‑1 (MQ=60)
                                               TGAACTTTCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAT                                              <  SRR4302543.493033/94‑1 (MQ=60)
                                                GAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATC                                             >  SRR4302543.2932700/1‑94 (MQ=60)
                                                GAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATC                                             <  SRR4302543.1361242/94‑1 (MQ=60)
                                                GAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATC                                             <  SRR4302543.628760/94‑1 (MQ=60)
                                                 AAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCC                                            <  SRR4302543.6454193/94‑1 (MQ=60)
                                                 AAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCC                                            <  SRR4302543.241714/94‑1 (MQ=60)
                                                 AAGTTGCAGCAGACGCGCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCC                                            <  SRR4302543.6804131/94‑1 (MQ=60)
                                                  AGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCG                                           >  SRR4302543.2123456/1‑94 (MQ=60)
                                                   GTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGC                                          <  SRR4302543.5875799/94‑1 (MQ=60)
                                                   GTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGC                                          >  SRR4302543.507835/1‑94 (MQ=60)
                                                    TTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCA                                         <  SRR4302543.8010409/94‑1 (MQ=60)
                                                        CGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCAT                                     >  SRR4302543.2424384/1‑94 (MQ=60)
                                                          CAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGA                                   >  SRR4302543.1966405/1‑94 (MQ=60)
                                                          CAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGA                                   <  SRR4302543.4596217/94‑1 (MQ=60)
                                                          CAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGA                                   >  SRR4302543.386296/1‑94 (MQ=60)
                                                           AGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTagagtggagatcggaagagcggttcagcaggaatgccgagac                                  >  SRR4302543.6180426/1‑52 (MQ=60)
                                                           AGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAT                                  >  SRR4302543.6616741/1‑94 (MQ=60)
                                                           AGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAT                                  <  SRR4302543.3268705/94‑1 (MQ=60)
                                                           AGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAT                                  >  SRR4302543.5260118/1‑94 (MQ=60)
                                                           AGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAT                                  >  SRR4302543.3936271/1‑94 (MQ=60)
                                                             ACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTT                                >  SRR4302543.3608774/1‑94 (MQ=60)
                                                             ACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTT                                >  SRR4302543.2358722/1‑94 (MQ=60)
                                                              CGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTA                               >  SRR4302543.3335904/1‑94 (MQ=60)
                                                              CGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTA                               >  SRR4302543.920674/1‑94 (MQ=60)
                                                              CGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTA                               <  SRR4302543.632018/94‑1 (MQ=60)
                                                               GCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAA                              <  SRR4302543.5769099/94‑1 (MQ=60)
                                                               GCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAA                              <  SRR4302543.534971/94‑1 (MQ=60)
                                                               GCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAA                              >  SRR4302543.556590/1‑94 (MQ=60)
                                                                CTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCCCCATGATTTAAT                             <  SRR4302543.4702650/94‑1 (MQ=60)
                                                                CTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAAT                             <  SRR4302543.1905247/94‑1 (MQ=60)
                                                                  CGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAA                           <  SRR4302543.5008462/94‑1 (MQ=60)
                                                                  CGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAA                           <  SRR4302543.5257756/94‑1 (MQ=60)
                                                                  CGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAA                           <  SRR4302543.3417680/94‑1 (MQ=60)
                                                                   GGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAA                          >  SRR4302543.7750715/1‑94 (MQ=60)
                                                                    GTAGCGACATGCGTATAAATTTGCGCGGTGGAGTGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAT                         >  SRR4302543.62759/1‑94 (MQ=60)
                                                                    GTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAT                         <  SRR4302543.7040287/94‑1 (MQ=60)
                                                                    GTAGCGACATGCGTATAAATGTGCGCGGTTGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAT                         <  SRR4302543.5906753/94‑1 (MQ=60)
                                                                     TAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATG                        <  SRR4302543.5331877/94‑1 (MQ=60)
                                                                     TAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATG                        <  SRR4302543.2166624/94‑1 (MQ=60)
                                                                     TAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATG                        <  SRR4302543.5031524/94‑1 (MQ=60)
                                                                     TAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATG                        <  SRR4302543.5457551/94‑1 (MQ=60)
                                                                     TAGCGACATCCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATG                        >  SRR4302543.631822/1‑94 (MQ=60)
                                                                     TAGCGACATCCGTATAAATTTGCGCAGTGGAGAGATCGCTGTGGCCCAGTAGCGTCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATG                        <  SRR4302543.4897004/94‑1 (MQ=60)
                                                                      AGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGA                       <  SRR4302543.3830279/94‑1 (MQ=60)
                                                                      AGCGACATGAGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGA                       <  SRR4302543.5019423/94‑1 (MQ=60)
                                                                       GCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAG                      >  SRR4302543.6000776/1‑94 (MQ=60)
                                                                       GCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAG                      <  SRR4302543.5920612/94‑1 (MQ=60)
                                                                       GCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAG                      <  SRR4302543.1230000/94‑1 (MQ=60)
                                                                        CGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGT                     >  SRR4302543.1775067/1‑94 (MQ=60)
                                                                         GACATGCGTATAAATTTGCGCGGTTGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCGCGCGTAAACCCGCACCATGATTTAATAAATGAGTG                    <  SRR4302543.2843505/94‑1 (MQ=60)
                                                                         GACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTG                    <  SRR4302543.7103241/94‑1 (MQ=60)
                                                                         GACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTG                    <  SRR4302543.1740386/94‑1 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   <  SRR4302543.95268/94‑1 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   <  SRR4302543.1004374/94‑1 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   >  SRR4302543.7804496/1‑94 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   >  SRR4302543.7813591/1‑94 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   <  SRR4302543.323483/94‑1 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   <  SRR4302543.6238249/94‑1 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   >  SRR4302543.3374991/1‑94 (MQ=60)
                                                                          ACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGG                   <  SRR4302543.4994499/94‑1 (MQ=60)
                                                                           CATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGC                  >  SRR4302543.7858933/1‑94 (MQ=60)
                                                                            ATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCA                 >  SRR4302543.6406760/1‑94 (MQ=60)
                                                                            ATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCA                 >  SRR4302543.318350/1‑94 (MQ=60)
                                                                            ATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCA                 >  SRR4302543.6179890/1‑94 (MQ=60)
                                                                            ATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCA                 >  SRR4302543.2391470/1‑94 (MQ=60)
                                                                              GCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAA               <  SRR4302543.1587800/94‑1 (MQ=60)
                                                                              GCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAA               <  SRR4302543.7229967/94‑1 (MQ=60)
                                                                               CGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAA              >  SRR4302543.628050/1‑94 (MQ=60)
                                                                               CGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAA              >  SRR4302543.5690824/1‑94 (MQ=60)
                                                                               CGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAA              >  SRR4302543.5690823/1‑94 (MQ=60)
                                                                                GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCGTCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG             <  SRR4302543.6292525/94‑1 (MQ=60)
                                                                                GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG             >  SRR4302543.4103656/1‑94 (MQ=60)
                                                                                GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG             >  SRR4302543.3902452/1‑94 (MQ=60)
                                                                                GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG             <  SRR4302543.3744984/94‑1 (MQ=60)
                                                                                GTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAG             >  SRR4302543.1505326/1‑94 (MQ=60)
                                                                                  ATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCG           >  SRR4302543.2319893/1‑94 (MQ=60)
                                                                                  ATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCG           <  SRR4302543.2728502/94‑1 (MQ=60)
                                                                                   TAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGT          <  SRR4302543.2467108/94‑1 (MQ=60)
                                                                                    AAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG         <  SRR4302543.4866652/94‑1 (MQ=60)
                                                                                    AAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG         <  SRR4302543.4051115/94‑1 (MQ=60)
                                                                                    AAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG         <  SRR4302543.28673/94‑1 (MQ=60)
                                                                                    AAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG         <  SRR4302543.3842054/94‑1 (MQ=60)
                                                                                    AAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTG         <  SRR4302543.5839001/94‑1 (MQ=60)
                                                                                     AATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGA        >  SRR4302543.4857131/1‑94 (MQ=60)
                                                                                     AATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGA        <  SRR4302543.7616848/94‑1 (MQ=60)
                                                                                      ATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAG       >  SRR4302543.2790632/1‑94 (MQ=60)
                                                                                      ATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAC       >  SRR4302543.5426906/1‑94 (MQ=60)
                                                                                      ATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAC       >  SRR4302543.5111266/1‑94 (MQ=60)
                                                                                      ATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAGCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAC       <  SRR4302543.6516781/94‑1 (MQ=60)
                                                                                       TTTGCGCGGTGGAGAGATCGCTGTGGCCCCGTAGCATCCGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACG      <  SRR4302543.379153/94‑1 (MQ=60)
                                                                                        TTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGC     >  SRR4302543.3911939/1‑94 (MQ=60)
                                                                                           CGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAAC  <  SRR4302543.2655314/94‑1 (MQ=60)
                                                                                             |                                                                                           
ATCTTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGCAAC  >  NC_000913/3036845‑3037029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑