Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,046,045 |
T→C |
V339V (GTA→GTG) |
gcvP ← |
glycine decarboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,046,045 | 0 | T | C | 100.0%
| 607.6
/ NA
| 190 | V339V (GTA→GTG) | gcvP | glycine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (68/122); total (68/122) |
Only 100 of 199 total aligned reads displayed.
TCGGTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGTACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGCC > NC_000913/3045956‑3046134
|
tCGGTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCAcc < 1:2021457/93‑1 (MQ=255)
ggTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTg > 2:4529655/1‑93 (MQ=255)
gTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTgg > 2:1473029/1‑93 (MQ=255)
gTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTgg > 2:3156064/1‑93 (MQ=255)
tCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTggg > 1:620142/1‑93 (MQ=255)
aGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGaa < 2:3404716/93‑1 (MQ=255)
aGACGGTGAATGCAGTTAGCCATACGTTACAGCCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCAAGCAGCACCTGGGaa < 2:279056/93‑1 (MQ=255)
gACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAg < 1:3691261/93‑1 (MQ=255)
gACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAg > 2:2455701/1‑93 (MQ=255)
aCGGTGAATGCGGTGAGCGATACGTTTCAGGCCAACCGGGCTGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGt < 2:3830471/93‑1 (MQ=255)
cGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTa < 1:2618994/93‑1 (MQ=255)
gTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACa < 2:4306431/93‑1 (MQ=255)
gTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACa > 2:620566/1‑93 (MQ=255)
tGAATGCGGTTAGCGATACGTTTCACGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGCAGTACaa > 2:695063/1‑93 (MQ=255)
gAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACaaa < 1:1558937/93‑1 (MQ=255)
gAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACaaa < 1:4086966/93‑1 (MQ=255)
aaTGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAAt < 1:4523373/93‑1 (MQ=255)
aaTGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAAt < 1:3211751/93‑1 (MQ=255)
aaTGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAAt < 2:4430523/93‑1 (MQ=255)
aaTGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAAt > 2:546012/1‑93 (MQ=255)
aTGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATg < 1:4193854/93‑1 (MQ=255)
aTGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATg < 1:1109156/93‑1 (MQ=255)
tGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGt < 1:2048847/93‑1 (MQ=255)
tGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGt < 2:525914/93‑1 (MQ=255)
cGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTg < 2:1247569/93‑1 (MQ=255)
cGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTCGGAAGTACAAATGTTg > 2:3196285/1‑93 (MQ=255)
cGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGACTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTg < 1:2510316/93‑1 (MQ=255)
gTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGa < 1:4101497/93‑1 (MQ=255)
ttAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAg < 1:2894356/93‑1 (MQ=255)
ttAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAg < 1:657616/93‑1 (MQ=255)
ttAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAg < 1:953337/93‑1 (MQ=255)
tAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGt < 1:1135964/93‑1 (MQ=255)
tAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGt < 2:2074990/93‑1 (MQ=255)
aGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGtt < 1:3115287/93‑1 (MQ=255)
gCGATACGTTTCAGGCCAACCGTGACGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTc < 2:3094486/93‑1 (MQ=255)
gCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTc > 2:2881585/1‑93 (MQ=255)
gCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTc > 2:2290488/1‑93 (MQ=255)
gATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGc > 2:4507195/1‑93 (MQ=255)
aCGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGTAGTTCGCttt < 2:668329/93‑1 (MQ=255)
gTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTtct < 2:3173557/93‑1 (MQ=255)
tttCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTtctc < 1:4060634/93‑1 (MQ=255)
tCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCAc < 1:3007642/93‑1 (MQ=255)
cAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCAcg < 2:4392309/93‑1 (MQ=255)
aGGCCAACCGGTACGTGATAAACGTCATACAGGCTGGCGATGTTTACCAGCAGCACCTCGGAAGTACAAATGTTGGAGTTCGCTTTCTCGcgg < 2:2376217/93‑1 (MQ=255)
aGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCAcgg > 1:2792609/1‑93 (MQ=255)
ccAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCAcggcgg > 2:3280311/1‑93 (MQ=255)
cAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGa > 1:49452/1‑93 (MQ=255)
cAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGa > 2:145756/1‑93 (MQ=255)
aaCCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGat > 1:3269303/1‑93 (MQ=255)
aaCCGGGCCGTGATAAACGGCATACAGGATGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGat > 1:852557/1‑93 (MQ=255)
aCCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGata < 1:1481190/93‑1 (MQ=255)
cGGGCCGTGATAAACGGCATACAGGCTGGCAATTTTTGCCGGCAGCCCTTGGAAAGTACAATTTTGGGAGTTGGCTTTCTCCCGGCGGatagg < 2:3665783/93‑3 (MQ=255)
gggCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTTGAGTTCGCTTTCTCACGGCGGATATGt > 2:4485917/1‑93 (MQ=255)
gggCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGt < 2:1044455/93‑1 (MQ=255)
gggCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGt < 1:1839468/93‑1 (MQ=255)
ggCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGtt < 1:371342/93‑1 (MQ=255)
gCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTg < 2:2840387/93‑1 (MQ=255)
ccGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCGCGGCGGATATGTTGc < 2:799413/93‑1 (MQ=255)
ccGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGc < 2:3514723/93‑1 (MQ=255)
ccGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGc > 1:1900580/1‑93 (MQ=255)
cGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCt < 1:2577884/93‑1 (MQ=255)
gATAAACGTCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTcgc < 1:2179644/93‑1 (MQ=255)
aTAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACAGCGGATATGTTGCTcgcg > 2:2001645/1‑93 (MQ=255)
tAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGa > 1:430326/1‑93 (MQ=255)
tAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGa < 2:1857659/93‑1 (MQ=255)
tAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACAGCGGATATGTTGCTagcgg > 1:1373985/1‑92 (MQ=255)
tAAACGGCATACAGGCTGGAGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTGCGCTTTCTCACGGCGGATATGTTGCTCGCGa < 1:3567453/93‑1 (MQ=255)
aCGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTc < 1:2477714/93‑1 (MQ=255)
aCGGCATACAGGATGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGGTGCTCGCGAGTc > 1:4281410/1‑93 (MQ=255)
cGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCt > 1:2314489/1‑93 (MQ=255)
ggCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTg < 2:2139056/93‑1 (MQ=255)
gCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGc > 1:1248955/1‑93 (MQ=255)
cATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCa < 1:1267945/93‑1 (MQ=255)
aTACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCAt < 1:157847/93‑1 (MQ=255)
tACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATc > 2:4149537/1‑93 (MQ=255)
ggCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCa < 2:2843917/93‑1 (MQ=255)
ggCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCa < 2:2256765/93‑1 (MQ=255)
ggCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCa < 1:2664176/93‑1 (MQ=255)
gCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCAt < 1:1736022/93‑1 (MQ=255)
tGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATgc < 2:289402/93‑1 (MQ=255)
gCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATgcgc > 2:4175707/1‑93 (MQ=255)
gCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATgcgc < 2:2166990/93‑1 (MQ=255)
cGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCa < 2:96078/93‑1 (MQ=255)
gATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAg > 2:3020886/1‑93 (MQ=255)
gATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAg < 1:3625494/93‑1 (MQ=255)
gATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAg > 2:1375035/1‑93 (MQ=255)
aTGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAgc > 1:3763181/1‑93 (MQ=255)
tGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAgcg > 1:3700208/1‑93 (MQ=255)
gTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCcgcgg > 2:2031114/1‑92 (MQ=255)
gTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAgcgc < 2:4658817/93‑1 (MQ=255)
tttGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGcgcg < 2:1156540/93‑1 (MQ=255)
ttGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCgg < 1:10593/93‑1 (MQ=255)
tGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGt < 2:1587318/93‑1 (MQ=255)
gCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTa < 1:3959459/93‑1 (MQ=255)
ccAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTAt > 2:1706654/1‑93 (MQ=255)
ccAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTAt < 2:2660267/93‑1 (MQ=255)
agcagcACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTg > 2:1933264/1‑93 (MQ=255)
agcagcACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTg > 1:822102/1‑93 (MQ=255)
agcagcACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTg > 2:3461730/1‑93 (MQ=255)
gcagcaCCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGc > 1:463998/1‑93 (MQ=255)
|
TCGGTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGTACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGCC > NC_000913/3045956‑3046134
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCGGTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGTACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGCCAG > NC_000913/3045956‑3046136
|
TCGGTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCT < SRR4302535.2036031/94‑1 (MQ=60)
TGTCAGACGGTGAATGCTGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGG < SRR4302535.3967171/94‑1 (MQ=60)
GTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGG > SRR4302535.624454/1‑94 (MQ=60)
GACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGT < SRR4302535.3716807/94‑1 (MQ=60)
CGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTAC < SRR4302535.2637772/94‑1 (MQ=60)
GTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAA > SRR4302535.4093320/1‑94 (MQ=60)
TGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAA < SRR4302535.781109/94‑1 (MQ=60)
TGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAA > SRR4302535.1192043/1‑94 (MQ=60)
GAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAAT < SRR4302535.1570177/94‑1 (MQ=60)
GAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAAT < SRR4302535.4114929/94‑1 (MQ=60)
AATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATG < SRR4302535.4554365/94‑1 (MQ=60)
AATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATG < SRR4302535.3233994/94‑1 (MQ=60)
ATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGT < SRR4302535.4222552/94‑1 (MQ=60)
ATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGT < SRR4302535.1117077/94‑1 (MQ=60)
TGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTT < SRR4302535.2063597/94‑1 (MQ=60)
CGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGACTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGG < SRR4302535.2528413/94‑1 (MQ=60)
GGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGA < SRR4302535.840658/94‑1 (MQ=60)
GGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGA > SRR4302535.2502323/1‑94 (MQ=60)
GGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGA > SRR4302535.2042189/1‑94 (MQ=60)
GTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAG < SRR4302535.4129579/94‑1 (MQ=60)
TTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGT < SRR4302535.960092/94‑1 (MQ=60)
TTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGT < SRR4302535.662205/94‑1 (MQ=60)
TTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGT < SRR4302535.2914829/94‑1 (MQ=60)
TAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTT < SRR4302535.1144064/94‑1 (MQ=60)
AGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTC < SRR4302535.3136977/94‑1 (MQ=60)
GATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCT > SRR4302535.1535697/1‑94 (MQ=60)
CGTTTCAGGCCACCCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCT < SRR4302535.1879004/94‑1 (MQ=60)
CGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCT < SRR4302535.1581255/94‑1 (MQ=60)
TTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCA > SRR4302535.3725498/1‑94 (MQ=60)
TTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCA < SRR4302535.4088429/94‑1 (MQ=60)
TTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCAC < SRR4302535.2994918/94‑1 (MQ=60)
TCAGGCCAACCGGGCCGTGATAAACGGCATACAGTCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACG < SRR4302535.3607968/94‑1 (MQ=60)
TCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACG < SRR4302535.3028709/94‑1 (MQ=60)
TCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACG < SRR4302535.2872990/94‑1 (MQ=60)
CAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGG < SRR4302535.4223943/94‑1 (MQ=60)
CAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGG > SRR4302535.2812481/1‑94 (MQ=60)
CAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCCATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGG > SRR4302535.4142413/1‑94 (MQ=60)
AGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGC < SRR4302535.4038233/94‑1 (MQ=60)
CCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGA > SRR4302535.4525349/1‑94 (MQ=60)
CCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGA > SRR4302535.49822/1‑94 (MQ=60)
CAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGAT > SRR4302535.3292014/1‑94 (MQ=60)
CAACCGGGCCGTGATAAACGGCATACAGGATGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGAT > SRR4302535.858563/1‑94 (MQ=60)
AACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGAGA > SRR4302535.1121497/1‑94 (MQ=60)
ACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATAT < SRR4302535.1491782/94‑1 (MQ=60)
ACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATAT < SRR4302535.1446183/94‑1 (MQ=60)
GGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTT < SRR4302535.1852736/94‑1 (MQ=60)
GGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTT > SRR4302535.4567957/1‑94 (MQ=60)
GGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTG < SRR4302535.373913/94‑1 (MQ=60)
GCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGC > SRR4302535.1914258/1‑94 (MQ=60)
CGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTC < SRR4302535.2596409/94‑1 (MQ=60)
GTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCG < SRR4302535.4115223/94‑1 (MQ=60)
GATAAACGTCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCG < SRR4302535.2195204/94‑1 (MQ=60)
ATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGA > SRR4302535.433319/1‑94 (MQ=60)
ATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACAGCGGATATGTTGCTagcgg > SRR4302535.1383804/1‑89 (MQ=60)
TAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAG < SRR4302535.2616026/94‑1 (MQ=60)
TAAACGGCATACAGGCTGGAGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTGCGCTTTCTCACGGCGGATATGTTGCTCGCGAG < SRR4302535.3592189/94‑1 (MQ=60)
AAACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGG > SRR4302535.1773981/1‑94 (MQ=60)
AACGGCATACAGGATGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGGTGCTCGCGAGTC > SRR4302535.4310704/1‑94 (MQ=60)
ACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCT < SRR4302535.2495584/94‑1 (MQ=60)
ACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCT > SRR4302535.2331049/1‑94 (MQ=60)
ACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCT < SRR4302535.2355188/94‑1 (MQ=60)
ACGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCT < SRR4302535.3760483/94‑1 (MQ=60)
CGGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTG > SRR4302535.1955754/1‑94 (MQ=60)
GGCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGC > SRR4302535.1257870/1‑94 (MQ=60)
GCATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCA < SRR4302535.4313047/94‑1 (MQ=60)
CATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCAT < SRR4302535.2792232/94‑1 (MQ=60)
CATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCAT < SRR4302535.1277016/94‑1 (MQ=60)
CATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCAT < SRR4302535.3240934/94‑1 (MQ=60)
ATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATC > SRR4302535.2538562/1‑94 (MQ=60)
ATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATC < SRR4302535.158961/94‑1 (MQ=60)
ATACAGGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATC < SRR4302535.3516761/94‑1 (MQ=60)
ACAGGCTGGCGGTGTTTGCCAGCAGCACCTGGGAAGTACAAAGGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGC < SRR4302535.1344409/94‑1 (MQ=60)
GGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCAT < SRR4302535.2679355/94‑1 (MQ=60)
GGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCAT < SRR4302535.2683250/94‑1 (MQ=60)
GGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCAT < SRR4302535.552339/94‑1 (MQ=60)
GGCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCAT < SRR4302535.3224690/94‑1 (MQ=60)
GCTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATG < SRR4302535.1748570/94‑1 (MQ=60)
CTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGC > SRR4302535.1258388/1‑94 (MQ=60)
CTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGC > SRR4302535.3093279/1‑94 (MQ=60)
CTGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCCTTCTCACGGCGGACATGTTGCTCGCGAGTCTGGAGCGCCATGG > SRR4302535.1740974/1‑94 (MQ=60)
TGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCG > SRR4302535.2329868/1‑94 (MQ=60)
TGGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCG < SRR4302535.2126502/94‑1 (MQ=60)
GGCGATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGC < SRR4302535.3677011/94‑1 (MQ=60)
GATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGC < SRR4302535.3650622/94‑1 (MQ=60)
GATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGC > SRR4302535.3789179/1‑94 (MQ=60)
ATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCG > SRR4302535.3725838/1‑94 (MQ=60)
ATGTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCG > SRR4302535.635678/1‑94 (MQ=60)
GTTTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCG < SRR4302535.3736972/94‑1 (MQ=60)
TTGCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGT < SRR4302535.10673/94‑1 (MQ=60)
GCCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTAT < SRR4302535.3986499/94‑1 (MQ=60)
CCAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATT > SRR4302535.4699515/1‑94 (MQ=60)
CAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTG > SRR4302535.827865/1‑94 (MQ=60)
CAGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTG < SRR4302535.878891/94‑1 (MQ=60)
AGCAGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGC > SRR4302535.467241/1‑94 (MQ=60)
AGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGCCAG < SRR4302535.679042/94‑1 (MQ=60)
AGCACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGCCAG < SRR4302535.706149/94‑1 (MQ=60)
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TCGGTCAGACGGTGAATGCGGTTAGCGATACGTTTCAGGCCAACCGGGCCGTGATAAACGGCATACAGGCTGGCGATGTTTGCCAGCAGTACCTGGGAAGTACAAATGTTGGAGTTCGCTTTCTCACGGCGGATATGTTGCTCGCGAGTCTGCATCGCCATGCGCAGCGCGGTATTGCCAG > NC_000913/3045956‑3046136
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
