Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,049,165 |
T→C |
G391G (GGA→GGG) |
visC ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,049,165 | 0 | T | C | 100.0%
| 565.2
/ NA
| 176 | G391G (GGA→GGG) | visC | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/80); total (96/80) |
Only 100 of 183 total aligned reads displayed.
GCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAATCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGG > NC_000913/3049075‑3049254
|
gCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAAccc < 1:2533704/93‑1 (MQ=255)
gAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCa > 2:1219609/1‑93 (MQ=255)
aaaaaCCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCAtt > 1:4662449/1‑93 (MQ=255)
aaaaaCCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCAtt > 1:2640070/1‑93 (MQ=255)
aaCCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGcc < 1:4523733/93‑1 (MQ=255)
ccGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTg < 2:2348900/93‑1 (MQ=255)
gaTGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGAt > 2:1496737/1‑93 (MQ=255)
gaTGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGAt > 1:923849/1‑93 (MQ=255)
gaTGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGAt > 1:4607170/1‑93 (MQ=255)
aTGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATa < 2:453683/93‑1 (MQ=255)
tGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATaa < 2:1585053/93‑1 (MQ=255)
tGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATaa > 2:732966/1‑93 (MQ=255)
aaaGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGt < 1:4057014/93‑1 (MQ=255)
aaGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGtt < 1:1157598/93‑1 (MQ=255)
aaGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGtt < 1:4163802/93‑1 (MQ=255)
gtgtGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGc > 2:358025/1‑93 (MQ=255)
gtgATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCgg > 2:3036778/1‑93 (MQ=255)
tgATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGc < 2:4400614/93‑1 (MQ=255)
tGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTa > 2:3458925/1‑93 (MQ=255)
ggTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAAc < 2:4043825/93‑1 (MQ=255)
ggTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAAc > 1:945110/1‑93 (MQ=255)
gTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACg > 2:2810813/1‑93 (MQ=255)
gTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACg > 1:3932541/1‑93 (MQ=255)
tATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGc > 1:1896374/1‑93 (MQ=255)
aTCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACggc > 1:1385373/1‑91 (MQ=255)
aTCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGcc < 1:3835305/93‑1 (MQ=255)
tCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCa > 2:2322319/1‑93 (MQ=255)
tCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCa > 2:467487/1‑93 (MQ=255)
cAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAg < 2:1214165/93‑1 (MQ=255)
aaaTAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAgg > 2:300861/1‑93 (MQ=255)
aaTAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGa > 2:4080853/1‑93 (MQ=255)
tAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAg > 2:2754796/1‑93 (MQ=255)
tAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAg < 2:2183581/93‑1 (MQ=255)
aaaCAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGc < 2:3790333/93‑1 (MQ=255)
aacaacAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCg < 1:3252731/93‑1 (MQ=255)
aacaacAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCg < 1:652363/93‑1 (MQ=255)
acaacaGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCgt < 1:672715/93‑1 (MQ=255)
acaacaGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCgt < 1:4200943/93‑1 (MQ=255)
caacaGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGTCTTAACGCCAGGAAGCgtg < 2:4550554/93‑1 (MQ=255)
aacaGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCgtgt > 2:2031919/1‑93 (MQ=255)
acaGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTc > 1:576285/1‑93 (MQ=255)
acaGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTc > 1:3138647/1‑93 (MQ=255)
acaGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTc > 2:3395154/1‑93 (MQ=255)
caGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCg > 2:636317/1‑93 (MQ=255)
gaggagAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGc > 1:2281247/1‑93 (MQ=255)
aggagAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGcc > 1:534374/1‑93 (MQ=255)
aggagAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGcc < 2:3320841/93‑1 (MQ=255)
ggagAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCa > 1:2931212/1‑93 (MQ=255)
gagaAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAg > 2:4029055/1‑93 (MQ=255)
gagaAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGGCGGcccg > 2:2081710/1‑91 (MQ=255)
agaAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGt < 2:1826320/93‑1 (MQ=255)
aaaTTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGttt < 2:483592/93‑1 (MQ=255)
aaaTTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGttt < 1:3663974/93‑1 (MQ=255)
aaTTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTc > 2:950483/1‑93 (MQ=255)
aaTTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTc > 1:1124893/1‑93 (MQ=255)
aaTTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTc > 2:2651662/1‑93 (MQ=255)
aTTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCa > 1:3209248/1‑93 (MQ=255)
aTTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCa > 1:778229/1‑93 (MQ=255)
attttAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCaa < 1:1566627/92‑1 (MQ=255)
tttAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAAc < 2:1722816/93‑1 (MQ=255)
aaCGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCaa < 2:1341231/93‑1 (MQ=255)
aaCGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCaa < 2:4153810/93‑1 (MQ=255)
aCGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAat > 1:2479673/1‑93 (MQ=255)
cGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAata < 1:1316682/93‑1 (MQ=255)
gCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAatat > 2:555589/1‑93 (MQ=255)
gCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAatat < 1:2388846/93‑1 (MQ=255)
gCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAatat > 2:4323633/1‑93 (MQ=255)
gCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGCGTCGGCCTGTTTCAAACCAatat > 1:2237234/1‑93 (MQ=255)
aGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCa < 1:2514185/93‑1 (MQ=255)
ccATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACg > 2:2595332/1‑93 (MQ=255)
ccATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACg < 2:3216306/93‑1 (MQ=255)
cATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgc > 2:2231266/1‑93 (MQ=255)
cATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgc > 1:1721945/1‑93 (MQ=255)
cATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgc > 1:4190665/1‑93 (MQ=255)
cATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgc > 2:3425212/1‑93 (MQ=255)
cATTAAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgc > 2:1109750/1‑93 (MQ=255)
aTTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgca > 2:3974838/1‑93 (MQ=255)
ttCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCGAGTTTCAAACCAATATCACgcag > 1:4086228/1‑93 (MQ=255)
tCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgcagc < 1:2881935/93‑1 (MQ=255)
tCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgcagc < 2:4455923/93‑1 (MQ=255)
cAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACgcagca < 1:4205318/93‑1 (MQ=255)
ggCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGt > 1:2775351/1‑93 (MQ=255)
ggCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGt > 1:3355356/1‑93 (MQ=255)
ggCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGt < 1:2169296/93‑1 (MQ=255)
ggCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGt < 1:2169297/93‑1 (MQ=255)
gCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGtt < 1:1191570/93‑1 (MQ=255)
cAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGttt < 2:4261294/93‑1 (MQ=255)
aaaTCGTGTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGtttt < 1:2011060/93‑1 (MQ=255)
aaTCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGttttt > 1:1287471/1‑93 (MQ=255)
aTCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGtttttt > 1:2585623/1‑93 (MQ=255)
aTCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGtttttt > 1:526926/1‑93 (MQ=255)
aTCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGtttttt < 2:1804206/93‑1 (MQ=255)
tCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTc < 2:46030/93‑1 (MQ=255)
gTTTATCCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGc < 1:554793/93‑1 (MQ=255)
gTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGc < 2:2932667/93‑1 (MQ=255)
tttAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGcc > 1:979331/1‑93 (MQ=255)
tttAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGcc > 2:601670/1‑93 (MQ=255)
ttAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCg > 2:1470627/1‑93 (MQ=255)
tAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCgg < 1:4451727/93‑1 (MQ=255)
tAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCgg < 1:1440381/93‑1 (MQ=255)
|
GCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAATCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGG > NC_000913/3049075‑3049254
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGGCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAATCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGGATTG > NC_000913/3049072‑3049258
|
CCGGCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAAC < SRR4302535.3435996/94‑1 (MQ=60)
CGGCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACC < SRR4302535.254013/94‑1 (MQ=60)
GGCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCC < SRR4302535.4485246/94‑1 (MQ=60)
GCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCC < SRR4302535.2551955/94‑1 (MQ=60)
GCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCC < SRR4302535.2551954/94‑1 (MQ=60)
GAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCAT > SRR4302535.4224568/1‑94 (MQ=60)
GAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCAT < SRR4302535.382966/94‑1 (MQ=60)
AAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATT > SRR4302535.2926174/1‑94 (MQ=60)
AAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATT > SRR4302535.2658983/1‑94 (MQ=60)
AAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATT > SRR4302535.4693979/1‑94 (MQ=60)
AACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCT < SRR4302535.4554726/94‑1 (MQ=60)
CCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGG < SRR4302535.1524050/94‑1 (MQ=60)
CCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGG < SRR4302535.3267545/94‑1 (MQ=60)
GGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGG < SRR4302535.591260/94‑1 (MQ=60)
AGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGAT > SRR4302535.930394/1‑94 (MQ=60)
AGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGAT > SRR4302535.3391695/1‑94 (MQ=60)
AGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGAT > SRR4302535.4638478/1‑94 (MQ=60)
AAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTT < SRR4302535.4084786/94‑1 (MQ=60)
AAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTG < SRR4302535.4192307/94‑1 (MQ=60)
AAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTG < SRR4302535.1165876/94‑1 (MQ=60)
AGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGC > SRR4302535.4664612/1‑94 (MQ=60)
TGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCT < SRR4302535.4547342/94‑1 (MQ=60)
TGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAA > SRR4302535.570380/1‑94 (MQ=60)
GGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAAC > SRR4302535.4145225/1‑94 (MQ=60)
GGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAAC > SRR4302535.951802/1‑94 (MQ=60)
GGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAAC < SRR4302535.3332018/94‑1 (MQ=60)
GGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACG > SRR4302535.1737084/1‑94 (MQ=60)
GGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACG > SRR4302535.3959383/1‑94 (MQ=60)
GGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACG > SRR4302535.2620666/1‑94 (MQ=60)
GGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACG < SRR4302535.968844/94‑1 (MQ=60)
GTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGC > SRR4302535.2495335/1‑94 (MQ=60)
GTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGC > SRR4302535.1910017/1‑94 (MQ=60)
TATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGGC > SRR4302535.1395261/1‑94 (MQ=60)
ATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCA > SRR4302535.42052/1‑94 (MQ=60)
ATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCA < SRR4302535.3861752/94‑1 (MQ=60)
TCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACACCATTGCCTGGCGGATAAGGTGGGGCTTAACGGCAG > SRR4302535.1674818/1‑94 (MQ=60)
CAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGG > SRR4302535.4308012/1‑94 (MQ=60)
ATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAG < SRR4302535.4589596/94‑1 (MQ=60)
AAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCG > SRR4302535.2156740/1‑94 (MQ=60)
AAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCG < SRR4302535.935492/94‑1 (MQ=60)
AAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCG > SRR4302535.676654/1‑94 (MQ=60)
AAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCG < SRR4302535.1982432/94‑1 (MQ=60)
AACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGT < SRR4302535.656912/94‑1 (MQ=60)
AACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGT < SRR4302535.3275331/94‑1 (MQ=60)
ACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTG < SRR4302535.4229690/94‑1 (MQ=60)
ACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTG < SRR4302535.677411/94‑1 (MQ=60)
AACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTC > SRR4302535.3160489/1‑94 (MQ=60)
AACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTC > SRR4302535.580332/1‑94 (MQ=60)
AACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTC < SRR4302535.2263305/94‑1 (MQ=60)
AACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTC > SRR4302535.2782187/1‑94 (MQ=60)
AGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGC > SRR4302535.2297541/1‑94 (MQ=60)
AGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGC > SRR4302535.2812414/1‑94 (MQ=60)
GAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCC > SRR4302535.538110/1‑94 (MQ=60)
AGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCA > SRR4302535.2951853/1‑94 (MQ=60)
GAAATTGTTACCGCAGCCATTCAGCCAACTCGTTTAACCCCATTGCCTGGCGCATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTT < SRR4302535.549361/94‑1 (MQ=60)
AAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTC < SRR4302535.3689338/94‑1 (MQ=60)
AAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTC > SRR4302535.1132920/1‑94 (MQ=60)
AATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCA > SRR4302535.783696/1‑94 (MQ=60)
AATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCA > SRR4302535.3231480/1‑94 (MQ=60)
ATTTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAA > SRR4302535.1315450/1‑94 (MQ=60)
ATTTTAACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAA < SRR4302535.1577933/94‑1 (MQ=60)
AACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAAT < SRR4302535.2202325/94‑1 (MQ=60)
AACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAAT > SRR4302535.2497555/1‑94 (MQ=60)
ACGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATA < SRR4302535.493400/94‑1 (MQ=60)
CGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATAT < SRR4302535.1326089/94‑1 (MQ=60)
CGCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGCGTCGGCCTGTTTCAAACCAATAT > SRR4302535.2253150/1‑94 (MQ=60)
GCAGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATC < SRR4302535.2406018/94‑1 (MQ=60)
AGCCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCAC < SRR4302535.2532310/94‑1 (MQ=60)
CCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGC > SRR4302535.4219346/1‑94 (MQ=60)
CCATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGC > SRR4302535.1734400/1‑94 (MQ=60)
ATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCGAGTTTCAAACCAATATCACGCAG > SRR4302535.4114186/1‑94 (MQ=60)
ATTCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAG > SRR4302535.4114184/1‑94 (MQ=60)
TCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCA > SRR4302535.1166748/1‑94 (MQ=60)
TCAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCA < SRR4302535.2902332/94‑1 (MQ=60)
CAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAG < SRR4302535.4036635/94‑1 (MQ=60)
CAGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAG < SRR4302535.4234097/94‑1 (MQ=60)
AGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGT > SRR4302535.3378718/1‑94 (MQ=60)
AGGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGT > SRR4302535.2795111/1‑94 (MQ=60)
GGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTT < SRR4302535.2184835/94‑1 (MQ=60)
GGCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTT < SRR4302535.2184836/94‑1 (MQ=60)
GCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTT < SRR4302535.1200102/94‑1 (MQ=60)
GCAAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTT < SRR4302535.3192418/94‑1 (MQ=60)
AAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTT > SRR4302535.1273605/1‑94 (MQ=60)
AAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTT > SRR4302535.1296647/1‑94 (MQ=60)
AAATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTT < SRR4302535.737572/94‑1 (MQ=60)
AAATCGTGTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTT < SRR4302535.2025536/94‑1 (MQ=60)
AATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTT > SRR4302535.530606/1‑94 (MQ=60)
AATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTT > SRR4302535.2604192/1‑94 (MQ=60)
ATCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTC < SRR4302535.2511513/94‑1 (MQ=60)
TCGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCG < SRR4302535.2367124/94‑1 (MQ=60)
CGTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGC > SRR4302535.137879/1‑94 (MQ=60)
GTTTATCCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCC < SRR4302535.558682/94‑1 (MQ=60)
GTTTAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCC > SRR4302535.986292/1‑94 (MQ=60)
TAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGGA < SRR4302535.4482257/94‑1 (MQ=60)
TAACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGGA < SRR4302535.1450682/94‑1 (MQ=60)
AACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGGAT > SRR4302535.512603/1‑94 (MQ=60)
ACCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGGATT < SRR4302535.3224959/94‑1 (MQ=60)
CCCCATTGCCTGGCGGATAAGTTGCGGCTTACCGCCAGGAAGCGCGTCGGCCAGTTTCAAACCAATATCACGCAGCAGCTTTTTCGCCGGATTG > SRR4302535.715467/1‑94 (MQ=60)
CCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGGATTG > SRR4302535.615543/1‑94 (MQ=60)
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CCGGCGAAAAAACCGGGAGATGAAAGTGTGATGGGTATCAAATAAACAACAGAGGAGAAATTTTTAACGCAGCCATTCAGGCAAATCGTTTAATCCCATTGCCTGGCGGATAAGTTGCGGCTTAACGCCAGGAAGCGTGTCGGCCAGTTTCAAACCAATATCACGCAGCAGTTTTTTCGCCGGATTG > NC_000913/3049072‑3049258
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
