Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,078,221 |
C→T |
Q478Q (CAG→CAA) |
tktA ← |
transketolase 1 isozyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,078,221 | 0 | C | T | 100.0%
| 683.2
/ NA
| 190 | Q478Q (CAG→CAA) | tktA | transketolase 1 isozyme |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (93/97); total (93/97) |
Only 100 of 195 total aligned reads displayed.
CTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGC > NC_000913/3078131‑3078310
|
cTCAACGCCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTg > 1:3524439/1‑93 (MQ=255)
tCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGCAGCGACTTGc > 2:396167/1‑93 (MQ=255)
tCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGc > 1:4423177/1‑93 (MQ=255)
aaCACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTc > 1:1738623/1‑93 (MQ=255)
acacCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCa > 1:209362/1‑93 (MQ=255)
acacCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCa < 1:2696918/93‑1 (MQ=255)
ccGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAAcc > 1:2407575/1‑93 (MQ=255)
gTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCgg > 1:231753/1‑93 (MQ=255)
tATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGc > 2:807222/1‑93 (MQ=255)
tttCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTg > 1:3169239/1‑93 (MQ=255)
ttcccACGCGACCGCGGATTCAACGTGGTCACACAGACGCCATGTAGACATGTTCGGGGTTACGCGCAAAGAAGCGACTTGCTCAACCGGCTg < 2:2504591/90‑1 (MQ=255)
ttCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTgg < 2:3931100/93‑1 (MQ=255)
ttCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTgg < 2:271748/93‑1 (MQ=255)
tCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGt < 2:1017179/93‑1 (MQ=255)
ccACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTg > 1:3489793/1‑93 (MQ=255)
aCGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAg > 2:551903/1‑93 (MQ=255)
cgACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCg > 2:760200/1‑93 (MQ=255)
gACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCgg > 1:2048460/1‑93 (MQ=255)
gACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCgg < 2:2723296/93‑1 (MQ=255)
aCCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCggg < 1:1306683/93‑2 (MQ=255)
aCCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCggg > 2:4413025/1‑92 (MQ=255)
ccGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCgggc < 2:1808176/93‑3 (MQ=255)
ccGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCgggc < 1:3290281/93‑3 (MQ=255)
gcgGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCg > 2:1435597/1‑93 (MQ=255)
gATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCt > 1:3926155/1‑93 (MQ=255)
gATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCt > 1:980402/1‑93 (MQ=255)
gATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCt < 2:3386666/93‑1 (MQ=255)
aTTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCtt < 1:2192547/93‑1 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc > 2:1843052/1‑93 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc > 1:95041/1‑93 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc > 1:1058619/1‑93 (MQ=255)
tCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCg > 1:1088451/1‑93 (MQ=255)
aaCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGcc > 1:1918935/1‑93 (MQ=255)
aaCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGcc < 2:4359092/93‑1 (MQ=255)
aaCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGcc > 2:3160715/1‑93 (MQ=255)
aCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGccc > 1:3523991/1‑93 (MQ=255)
ccTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCa > 2:2397640/1‑93 (MQ=255)
ccTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCa < 1:1586300/93‑1 (MQ=255)
ccTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCa < 1:798517/93‑1 (MQ=255)
cTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAg > 2:2821564/1‑93 (MQ=255)
tGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGa > 1:3836053/1‑93 (MQ=255)
tGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGa < 1:4656695/93‑1 (MQ=255)
ggTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGAc < 2:1481004/93‑1 (MQ=255)
ggTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGAc < 2:1164795/93‑1 (MQ=255)
ggTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGACTGGTGAGTCGGGCCGTCTTCGCCCAGAc < 2:3791702/93‑1 (MQ=255)
tCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCg > 2:305684/1‑93 (MQ=255)
cacaCGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGa < 1:2652065/93‑1 (MQ=255)
cacaCGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGa < 2:3816571/93‑1 (MQ=255)
acacGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAt < 2:688666/93‑1 (MQ=255)
cacGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATg > 1:1806305/1‑93 (MQ=255)
acGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGCTgg > 1:3742475/1‑93 (MQ=255)
cGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGa < 2:644106/93‑1 (MQ=255)
ggACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAg > 2:4445752/1‑93 (MQ=255)
gACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGt < 2:1325444/93‑1 (MQ=255)
gACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGt < 1:1532672/93‑1 (MQ=255)
aCGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAggc > 1:2970338/1‑91 (MQ=255)
aCGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTc > 1:3091237/1‑93 (MQ=255)
cGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCg > 1:2609517/1‑93 (MQ=255)
gCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCgg > 2:936622/1‑92 (MQ=255)
gCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGt < 2:2951178/93‑1 (MQ=255)
gCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGt > 1:122102/1‑93 (MQ=255)
ccATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTg < 1:3773048/93‑1 (MQ=255)
ccATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTg > 1:882581/1‑93 (MQ=255)
tGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGgt > 2:4061717/1‑93 (MQ=255)
aGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTa > 2:2638011/1‑93 (MQ=255)
aGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTa < 1:4254285/93‑1 (MQ=255)
aCATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTaaa < 1:663713/93‑1 (MQ=255)
aCATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTaaa < 1:1729795/93‑1 (MQ=255)
cATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAc < 2:4335465/93‑1 (MQ=255)
cATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAc > 2:4124217/1‑93 (MQ=255)
cATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGACGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAc > 1:4158178/1‑93 (MQ=255)
aTGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAcc > 2:857279/1‑93 (MQ=255)
gTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCAt < 2:1741235/93‑1 (MQ=255)
gTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCAt > 2:497378/1‑93 (MQ=255)
ttCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATc < 2:4159457/93‑1 (MQ=255)
ttCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATc < 2:2323174/93‑1 (MQ=255)
ggggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCAcc < 2:2140114/93‑1 (MQ=255)
ggggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCAcc < 2:3211020/93‑1 (MQ=255)
gggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCt > 2:3613604/1‑93 (MQ=255)
gggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCt > 1:4617560/1‑93 (MQ=255)
gTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGa < 2:2365290/93‑1 (MQ=255)
gTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATAACCTGa > 2:3259929/1‑93 (MQ=255)
aCGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGc < 2:1369014/93‑1 (MQ=255)
aCGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGc > 1:1471095/1‑93 (MQ=255)
aCGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGc < 2:2309782/93‑1 (MQ=255)
aCGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGc < 2:2545491/93‑1 (MQ=255)
cgcgCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCt < 1:4047556/93‑1 (MQ=255)
gcAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTgat > 1:585826/1‑91 (MQ=255)
gcAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGtt < 1:2816731/93‑1 (MQ=255)
gcAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGtt < 2:1957718/93‑1 (MQ=255)
cAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGttt < 1:4479015/93‑1 (MQ=255)
agagAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtc > 2:1590096/1‑93 (MQ=255)
gagaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtca < 2:3127714/93‑1 (MQ=255)
gagaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGGCGTGGGTGTAAACCATCACCTGACGCTGTTtca > 2:4552143/1‑93 (MQ=255)
agaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcat < 1:1861391/93‑1 (MQ=255)
gaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCACACAGATGGAGTCGTGCGGGTAAACCATCACCCGCCGCTGTTtcctc > 2:1645801/1‑93 (MQ=255)
aaGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcatca < 2:4648326/93‑1 (MQ=255)
aaGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcatca > 2:1979237/1‑93 (MQ=255)
gCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCAGCTGACGCTGTTTCATCAgc > 1:4306858/1‑93 (MQ=255)
gACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAgcgc > 2:4207295/1‑93 (MQ=255)
|
CTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGC > NC_000913/3078131‑3078310
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCC > NC_000913/3078128‑3078314
|
ACGCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACT < SRR4302535.1341642/94‑1 (MQ=60)
ACGCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACT < SRR4302535.1738351/94‑1 (MQ=60)
ACGCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACT < SRR4302535.1683772/94‑1 (MQ=60)
CGCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTT > SRR4302535.75273/1‑94 (MQ=60)
GCTCAACGCCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTG > SRR4302535.3548916/1‑94 (MQ=60)
GCTCAACGCCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTG > SRR4302535.3548917/1‑94 (MQ=60)
GCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTG < SRR4302535.2194797/94‑1 (MQ=60)
GCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTG < SRR4302535.1656450/94‑1 (MQ=60)
CTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGC > SRR4302535.4453469/1‑94 (MQ=60)
CAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTC > SRR4302535.1751189/1‑94 (MQ=60)
AACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCA > SRR4302535.210799/1‑94 (MQ=60)
ACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAA < SRR4302535.2716194/94‑1 (MQ=60)
ACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACC > SRR4302535.2424904/1‑94 (MQ=60)
ACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACC > SRR4302535.3163172/1‑94 (MQ=60)
CCGTATTTCCACGCGACCGCGGATTGAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCG < SRR4302535.819413/94‑1 (MQ=60)
CGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGG > SRR4302535.233352/1‑94 (MQ=60)
ATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTG > SRR4302535.3191191/1‑94 (MQ=60)
TCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTG > SRR4302535.3514042/1‑94 (MQ=60)
CGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTG > SRR4302535.1253391/1‑94 (MQ=60)
GCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCG < SRR4302535.4357115/94‑1 (MQ=60)
CGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGG > SRR4302535.2063209/1‑94 (MQ=60)
ACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGC < SRR4302535.1316014/94‑1 (MQ=60)
CCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCC < SRR4302535.3313157/94‑1 (MQ=60)
CGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCG < SRR4302535.685861/94‑1 (MQ=60)
GCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGggcgt > SRR4302535.2624244/1‑89 (MQ=60)
GCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGT > SRR4302535.2624243/1‑94 (MQ=60)
CGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTC > SRR4302535.2640800/1‑94 (MQ=60)
GGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCT > SRR4302535.3952979/1‑94 (MQ=60)
GGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCT > SRR4302535.987370/1‑94 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC < SRR4302535.4609482/94‑1 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC > SRR4302535.95718/1‑94 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC > SRR4302535.1066155/1‑94 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC < SRR4302535.2208149/94‑1 (MQ=60)
TTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCG > SRR4302535.1096198/1‑94 (MQ=60)
TAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCC < SRR4302535.3490409/94‑1 (MQ=60)
CAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCC > SRR4302535.1932765/1‑94 (MQ=60)
AACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCC > SRR4302535.3548464/1‑94 (MQ=60)
CCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAG < SRR4302535.804123/94‑1 (MQ=60)
CCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAG < SRR4302535.1597747/94‑1 (MQ=60)
CTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGA > SRR4302535.3862504/1‑94 (MQ=60)
TGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGAC < SRR4302535.4688204/94‑1 (MQ=60)
GGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACC > SRR4302535.1122205/1‑94 (MQ=60)
GGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACC < SRR4302535.4143360/94‑1 (MQ=60)
CACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAT < SRR4302535.3779910/94‑1 (MQ=60)
CACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAT < SRR4302535.2671063/94‑1 (MQ=60)
CACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAT < SRR4302535.4495423/94‑1 (MQ=60)
ACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATG > SRR4302535.1819355/1‑94 (MQ=60)
ACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATG < SRR4302535.427472/94‑1 (MQ=60)
CACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGCTGG > SRR4302535.3768369/1‑94 (MQ=60)
CACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGG > SRR4302535.561643/1‑94 (MQ=60)
CACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGG < SRR4302535.160832/94‑1 (MQ=60)
CGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAG < SRR4302535.191398/94‑1 (MQ=60)
GACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTC > SRR4302535.3112764/1‑94 (MQ=60)
GACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTC < SRR4302535.1543714/94‑1 (MQ=60)
GACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGGC > SRR4302535.2991188/1‑94 (MQ=60)
ACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCG > SRR4302535.2628243/1‑94 (MQ=60)
CGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGT > SRR4302535.3031449/1‑94 (MQ=60)
CGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGT > SRR4302535.122957/1‑94 (MQ=60)
GCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTG > SRR4302535.888830/1‑94 (MQ=60)
CCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGG < SRR4302535.3799070/94‑1 (MQ=60)
CATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGG < SRR4302535.2408442/94‑1 (MQ=60)
CATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGG > SRR4302535.1783157/1‑94 (MQ=60)
TGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTG < SRR4302535.3659257/94‑1 (MQ=60)
GTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGT > SRR4302535.4334457/1‑94 (MQ=60)
AGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAA < SRR4302535.4283432/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC < SRR4302535.1742298/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC < SRR4302535.2073030/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC < SRR4302535.668352/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGACGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC > SRR4302535.4186641/1‑94 (MQ=60)
TGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCAT > SRR4302535.2303068/1‑94 (MQ=60)
GGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCT > SRR4302535.215352/1‑94 (MQ=60)
GGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCT > SRR4302535.4648941/1‑94 (MQ=60)
GGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTG < SRR4302535.1366551/94‑1 (MQ=60)
GGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTG < SRR4302535.4011467/94‑1 (MQ=60)
GTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGAC < SRR4302535.2735972/94‑1 (MQ=60)
TTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACG < SRR4302535.205306/94‑1 (MQ=60)
TACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGC > SRR4302535.1481629/1‑94 (MQ=60)
ACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGATTCGTGGGTGTAAACCATCACCTGACGCT < SRR4302535.2708267/94‑1 (MQ=60)
CGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTG < SRR4302535.4075262/94‑1 (MQ=60)
CGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGAT > SRR4302535.589930/1‑94 (MQ=60)
GCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTT < SRR4302535.2836738/94‑1 (MQ=60)
CAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTC < SRR4302535.3898519/94‑1 (MQ=60)
CAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTC > SRR4302535.1542645/1‑94 (MQ=60)
CAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTC < SRR4302535.4509766/94‑1 (MQ=60)
AGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCA > SRR4302535.1747566/1‑94 (MQ=60)
GAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCAT < SRR4302535.3835706/94‑1 (MQ=60)
AGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATC < SRR4302535.3519469/94‑1 (MQ=60)
AGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATC > SRR4302535.977637/1‑94 (MQ=60)
AGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATC < SRR4302535.1874814/94‑1 (MQ=60)
GAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCA < SRR4302535.3276074/94‑1 (MQ=60)
AGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCAGCTGACGCTGTTTCATCAGC > SRR4302535.4336323/1‑94 (MQ=60)
AGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGC < SRR4302535.1569893/94‑1 (MQ=60)
GCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCG < SRR4302535.1853461/94‑1 (MQ=60)
CGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGC > SRR4302535.4656388/1‑94 (MQ=60)
CGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGC > SRR4302535.912624/1‑94 (MQ=60)
ACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAG > SRR4302535.2793561/1‑94 (MQ=60)
CTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGG > SRR4302535.4533195/1‑94 (MQ=60)
TTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCC > SRR4302535.516924/1‑94 (MQ=60)
|
ACGCTCAACACCGTATTTCCACGCGACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCC > NC_000913/3078128‑3078314
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
