Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,082,961 |
A→G |
S324P (TCC→CCC) |
speA ← |
biosynthetic arginine decarboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,082,961 | 0 | A | G | 99.5%
| 586.2
/ NA
| 190 | S324P (TCC→CCC) | speA | biosynthetic arginine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (109/80); minor base T (0/1); total (109/81) |
| Fisher's exact test for biased strand distribution p-value = 4.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 198 total aligned reads displayed.
GCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGACTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACAT > NC_000913/3082871‑3083050
|
gCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCTCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCt < 2:273422/93‑1 (MQ=255)
cGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTg < 1:1261856/93‑1 (MQ=255)
ggCAGACGGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGc < 1:3459930/93‑1 (MQ=255)
cAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGa < 1:1000695/93‑1 (MQ=255)
gACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAAc > 2:1397684/1‑93 (MQ=255)
cGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAg > 2:3786674/1‑93 (MQ=255)
gTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGt < 1:2106645/93‑1 (MQ=255)
gTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGt > 1:2392220/1‑93 (MQ=255)
gTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGt < 1:1670355/93‑1 (MQ=255)
gTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGt > 1:1452001/1‑93 (MQ=255)
ttttCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGtc > 2:5423/1‑92 (MQ=255)
tttCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTAc < 1:2013424/93‑1 (MQ=255)
ttcACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTc > 1:3261918/1‑93 (MQ=255)
ttcACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTc > 2:1787153/1‑93 (MQ=255)
tcACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCa < 1:3576882/93‑1 (MQ=255)
tcACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCa < 1:4030701/93‑1 (MQ=255)
tcACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCa < 1:603365/93‑1 (MQ=255)
acGTATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAAt > 2:3346576/1‑93 (MQ=255)
ctcATCGCCAATCGCCCAGATAATGTTGTGGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATc < 2:2430419/91‑1 (MQ=255)
gCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATcc < 1:2778701/93‑1 (MQ=255)
cATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCa < 2:3437075/93‑1 (MQ=255)
cATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCa < 1:4676004/93‑1 (MQ=255)
aTCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCAc > 1:771274/1‑93 (MQ=255)
tCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACg > 2:4095750/1‑93 (MQ=255)
cGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGc > 2:4471688/1‑93 (MQ=255)
tccAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGTTGCGAACGAGTTCCTTCATAATCCACGcc < 2:3711706/92‑1 (MQ=255)
gCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGcc < 2:1928374/93‑1 (MQ=255)
gCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGcc < 2:3760267/93‑1 (MQ=255)
gCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGcc > 1:3969680/1‑93 (MQ=255)
gCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGcc > 1:3619987/1‑93 (MQ=255)
ccAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGccc > 2:3496682/1‑93 (MQ=255)
cAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCa > 2:1113590/1‑93 (MQ=255)
cAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCa > 1:748430/1‑93 (MQ=255)
cAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCa < 2:83621/93‑1 (MQ=255)
cAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCa < 2:2967289/93‑1 (MQ=255)
cAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCa > 1:1056201/1‑93 (MQ=255)
aaTCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAg > 1:3393349/1‑93 (MQ=255)
aaTCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAg > 1:530806/1‑93 (MQ=255)
tCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAc < 1:2813850/93‑1 (MQ=255)
gCCCAGATAATGTTGTTGGCGTATTCATTTAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCACAccc > 2:3138093/1‑92 (MQ=255)
gCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAccg < 1:2713399/93‑1 (MQ=255)
gCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAccg > 1:243495/1‑93 (MQ=255)
gCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAccc > 1:2898603/1‑92 (MQ=255)
ccAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCACAccgcc > 1:229859/1‑93 (MQ=255)
aGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAccgccgc > 1:1286033/1‑93 (MQ=255)
aGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAccgccgc > 1:1405004/1‑93 (MQ=255)
gATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCATCATAATCCACGCCCAGAccgccgcc > 2:685266/1‑93 (MQ=255)
tAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGa < 1:3996529/93‑1 (MQ=255)
tAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGa < 1:1571825/93‑1 (MQ=255)
tAATGTTGTTGGCATATCCATTGAGGCCGCAGTTCACCGAACAGTTGGGCTGCGAACGCGTTCCTTCATCATCCACGCCCAGAccgccgccgc > 2:651934/1‑92 (MQ=255)
aaTGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGAc > 2:4440013/1‑93 (MQ=255)
tgttgtTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGt > 1:1748903/1‑93 (MQ=255)
gttgttGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTc < 1:431721/93‑1 (MQ=255)
gttgttGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTc < 1:1817505/93‑1 (MQ=255)
ttgttgGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCg > 2:745205/1‑93 (MQ=255)
gttgGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGaa < 1:3826338/93‑1 (MQ=255)
ttgGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAg > 1:1032615/1‑93 (MQ=255)
tgGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGc < 2:4407896/93‑1 (MQ=255)
tgGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGc > 1:3488204/1‑93 (MQ=255)
ggCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCa > 2:4654485/1‑93 (MQ=255)
gCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAGCGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGcgc < 2:755214/93‑3 (MQ=255)
gCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCAc < 1:1212120/93‑1 (MQ=255)
gCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCAc < 2:1416175/93‑1 (MQ=255)
cGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGAACt > 1:3013157/1‑93 (MQ=255)
gTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTg > 2:1192166/1‑93 (MQ=255)
tATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGa > 2:4275750/1‑93 (MQ=255)
ttCATTGAGGCCGTAGTTCACCGAACAGTCGGGGTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAat < 2:1666927/93‑1 (MQ=255)
ttCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAat > 1:1240102/1‑93 (MQ=255)
tCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAata > 2:2626950/1‑93 (MQ=255)
cATTTAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAatat < 1:971698/93‑1 (MQ=255)
cATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAatat < 2:2510950/93‑1 (MQ=255)
cATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAatat < 2:4546678/93‑1 (MQ=255)
aTTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATAtt > 2:2820087/1‑93 (MQ=255)
aTTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATAtt < 1:3140232/93‑1 (MQ=255)
aTTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATAtt < 1:861308/93‑1 (MQ=255)
ttGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTg > 2:236235/1‑93 (MQ=255)
ttGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTg > 1:1941143/1‑93 (MQ=255)
ttGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTg > 1:570307/1‑93 (MQ=255)
tGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGa < 1:3906810/93‑1 (MQ=255)
aGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACg > 1:3219870/1‑93 (MQ=255)
ggCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGc > 2:3659350/1‑93 (MQ=255)
gTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAg > 2:3944924/1‑93 (MQ=255)
tAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGc < 1:3355671/93‑1 (MQ=255)
tAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGc > 2:2053276/1‑93 (MQ=255)
tAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGc > 2:2998822/1‑93 (MQ=255)
tAGTTCACCGAACAGTCGGACTTGGATCGAGTACCTTCATAATCCACTCCCAGACCGCCGCCGACTTCGAAGCTCTGAATATTGACGCCCAGc < 2:3886772/93‑1 (MQ=255)
gTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGACGCCGACGTCGAAGCACTGAATATTGACGCCCAGCtt > 1:3055475/1‑93 (MQ=255)
tccccGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTtgt < 2:1756365/90‑1 (MQ=255)
tCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTtgt < 1:787996/93‑1 (MQ=255)
aCCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGc < 2:1525666/93‑1 (MQ=255)
aCCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGc < 1:437333/93‑1 (MQ=255)
cGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAg > 2:397070/1‑93 (MQ=255)
gAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGt > 2:2243432/1‑93 (MQ=255)
gAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACAGAATATTGACGCCCAGCTTGTGCAGt > 2:798756/1‑93 (MQ=255)
aCAGTCGGTCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTc < 1:2685458/93‑1 (MQ=255)
aCAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTc > 1:1110268/1‑93 (MQ=255)
aCAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTc < 2:1628747/93‑1 (MQ=255)
aGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCca < 1:1391592/93‑1 (MQ=255)
gTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCcac > 2:1846938/1‑93 (MQ=255)
gTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCcac > 1:3518528/1‑93 (MQ=255)
|
GCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGACTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACAT > NC_000913/3082871‑3083050
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGACTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAGA > NC_000913/3082869‑3083053
|
ATGCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGC > SRR4302535.2626314/1‑94 (MQ=60)
TGCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCT < SRR4302535.4242901/94‑1 (MQ=60)
TGCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCT < SRR4302535.2545876/94‑1 (MQ=60)
TGCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCT < SRR4302535.2249188/94‑1 (MQ=60)
CGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGC > SRR4302535.34051/1‑94 (MQ=60)
CGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGC < SRR4302535.1270884/94‑1 (MQ=60)
CGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGC < SRR4302535.233278/94‑1 (MQ=60)
GGCAGACGGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCG < SRR4302535.3483986/94‑1 (MQ=60)
CAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAA < SRR4302535.1007806/94‑1 (MQ=60)
AGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAAC > SRR4302535.3275914/1‑94 (MQ=60)
GACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACG < SRR4302535.1289919/94‑1 (MQ=60)
GACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACG > SRR4302535.3504071/1‑94 (MQ=60)
GACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACG < SRR4302535.58202/94‑1 (MQ=60)
CGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGT > SRR4302535.2409418/1‑94 (MQ=60)
CGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGT > SRR4302535.1462389/1‑94 (MQ=60)
GTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTA > SRR4302535.2416118/1‑94 (MQ=60)
GTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTA < SRR4302535.1682446/94‑1 (MQ=60)
GTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTA < SRR4302535.2121841/94‑1 (MQ=60)
TTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACC < SRR4302535.2027930/94‑1 (MQ=60)
CTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTC > SRR4302535.205372/1‑94 (MQ=60)
CTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTC > SRR4302535.3284577/1‑94 (MQ=60)
TCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCAT < SRR4302535.3601680/94‑1 (MQ=60)
TCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCAT < SRR4302535.607587/94‑1 (MQ=60)
TCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCAT < SRR4302535.4058277/94‑1 (MQ=60)
ACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATC > SRR4302535.3241678/1‑94 (MQ=60)
CGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCC > SRR4302535.1699888/1‑94 (MQ=60)
GCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCA < SRR4302535.2798485/94‑1 (MQ=60)
CATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCAC > SRR4302535.776703/1‑94 (MQ=60)
CATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCAC < SRR4302535.4707567/94‑1 (MQ=60)
CATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCAC < SRR4302535.1166239/94‑1 (MQ=60)
CGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCC > SRR4302535.403260/1‑94 (MQ=60)
CGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCC > SRR4302535.3996795/1‑94 (MQ=60)
CGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCC > SRR4302535.3645080/1‑94 (MQ=60)
CCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCA > SRR4302535.1063712/1‑94 (MQ=60)
CCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCA > SRR4302535.753695/1‑94 (MQ=60)
CAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAG < SRR4302535.623171/94‑1 (MQ=60)
CAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAG > SRR4302535.3416959/1‑94 (MQ=60)
CAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAG > SRR4302535.534519/1‑94 (MQ=60)
ATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAC < SRR4302535.772622/94‑1 (MQ=60)
ATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGAC < SRR4302535.569780/94‑1 (MQ=60)
TCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACC < SRR4302535.2833848/94‑1 (MQ=60)
TCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACC > SRR4302535.2872266/1‑94 (MQ=60)
CGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCG > SRR4302535.245163/1‑94 (MQ=60)
CGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCC > SRR4302535.2919101/1‑94 (MQ=60)
GCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGC < SRR4302535.2732785/94‑1 (MQ=60)
CCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCC > SRR4302535.4155790/1‑94 (MQ=60)
CCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCC < SRR4302535.2786568/94‑1 (MQ=60)
CCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCC > SRR4302535.4480233/1‑94 (MQ=60)
CCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCACACCGCC > SRR4302535.231442/1‑94 (MQ=60)
CCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCG > SRR4302535.304646/1‑94 (MQ=60)
CCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCG > SRR4302535.1236130/1‑94 (MQ=60)
CAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGC > SRR4302535.1295200/1‑94 (MQ=60)
CAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGC > SRR4302535.1415048/1‑94 (MQ=60)
CAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGC > SRR4302535.1417008/1‑94 (MQ=60)
AGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCC > SRR4302535.1062312/1‑94 (MQ=60)
atgtgttttgtgtgcgttttcgTTGAGGGCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCG < SRR4302535.2670786/72‑1 (MQ=60)
GATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCG > SRR4302535.911814/1‑94 (MQ=60)
ATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGA > SRR4302535.2728451/1‑94 (MQ=60)
TAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGAC < SRR4302535.4023872/94‑1 (MQ=60)
TAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGAC < SRR4302535.1583172/94‑1 (MQ=60)
AATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCTCCGATCAGTCGGGCTGCGAACTAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACG < SRR4302535.4388568/94‑1 (MQ=60)
AATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACG > SRR4302535.3541871/1‑94 (MQ=60)
AATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACG > SRR4302535.3556437/1‑94 (MQ=60)
AATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACG < SRR4302535.3150165/94‑1 (MQ=60)
ATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGT > SRR4302535.1761555/1‑94 (MQ=60)
GTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCG < SRR4302535.1830640/94‑1 (MQ=60)
GTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCG < SRR4302535.4003539/94‑1 (MQ=60)
GTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCG < SRR4302535.434728/94‑1 (MQ=60)
TTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGA > SRR4302535.2180208/1‑94 (MQ=60)
TGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAA < SRR4302535.3730195/94‑1 (MQ=60)
GTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAG < SRR4302535.3852736/94‑1 (MQ=60)
GTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAG < SRR4302535.3870506/94‑1 (MQ=60)
GTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAG > SRR4302535.1039951/1‑94 (MQ=60)
GTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAG < SRR4302535.1927982/94‑1 (MQ=60)
TTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGC > SRR4302535.3512420/1‑94 (MQ=60)
TGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCA < SRR4302535.1594712/94‑1 (MQ=60)
TGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCA > SRR4302535.3006187/1‑94 (MQ=60)
GCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACT < SRR4302535.1220818/94‑1 (MQ=60)
GCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGAACT > SRR4302535.3034272/1‑94 (MQ=60)
GTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGA > SRR4302535.1569522/1‑94 (MQ=60)
GTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGA > SRR4302535.2807922/1‑94 (MQ=60)
ATTCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAAT > SRR4302535.1248955/1‑94 (MQ=60)
TCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATAT < SRR4302535.347169/94‑1 (MQ=60)
TCATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCCACGTCGGAGCACTGAATAT > SRR4302535.4360436/1‑94 (MQ=60)
CATTTAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATT < SRR4302535.978593/94‑1 (MQ=60)
CATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATT > SRR4302535.1410769/1‑94 (MQ=60)
ATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTG < SRR4302535.867391/94‑1 (MQ=60)
ATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTG > SRR4302535.813666/1‑94 (MQ=60)
ATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTG > SRR4302535.574313/1‑94 (MQ=60)
ATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTG > SRR4302535.1955129/1‑94 (MQ=60)
ATTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTG < SRR4302535.3162082/94‑1 (MQ=60)
TTGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGA > SRR4302535.1817375/1‑94 (MQ=60)
TGAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGAC < SRR4302535.3933576/94‑1 (MQ=60)
GAGGCCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACG > SRR4302535.3242182/1‑94 (MQ=60)
CCGTAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACCCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCA < SRR4302535.3323969/94‑1 (MQ=60)
TAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCT < SRR4302535.2487090/94‑1 (MQ=60)
TAGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCT < SRR4302535.3379036/94‑1 (MQ=60)
AGTTCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGACGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTT > SRR4302535.3076860/1‑94 (MQ=60)
TCACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTG < SRR4302535.793528/94‑1 (MQ=60)
ACCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCA < SRR4302535.440388/94‑1 (MQ=60)
CCGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAG < SRR4302535.1962822/94‑1 (MQ=60)
CGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGT > SRR4302535.3959820/1‑94 (MQ=60)
CGAACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGT > SRR4302535.3638936/1‑94 (MQ=60)
AACAGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTC > SRR4302535.1118196/1‑94 (MQ=60)
ACAGTCGGTCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCC < SRR4302535.2704660/94‑1 (MQ=60)
AGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCAC > SRR4302535.3542970/1‑94 (MQ=60)
AGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCAC < SRR4302535.1268324/94‑1 (MQ=60)
AGTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCAC < SRR4302535.1401525/94‑1 (MQ=60)
GTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACA > SRR4302535.1353182/1‑94 (MQ=60)
GTCGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACA < SRR4302535.52164/94‑1 (MQ=60)
CGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATA > SRR4302535.689095/1‑94 (MQ=60)
CGGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATA < SRR4302535.1100232/94‑1 (MQ=60)
GGGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAG < SRR4302535.2591835/94‑1 (MQ=60)
GGCTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAGA < SRR4302535.505039/94‑1 (MQ=60)
|
ATGCGGCAGACCGTTTTCTTCACACGCATCGCCAATCGCCCAGATAATGTTGTTGGCGTATTCATTGAGGCCGTAGTTCACCGAACAGTCGGACTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAGA > NC_000913/3082869‑3083053
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
