Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,100,603 |
A→G |
F90L (TTC→CTC) |
yggH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,100,603 | 0 | A | G | 99.4%
| 501.2
/ NA
| 162 | F90L (TTC→CTC) | yggH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (86/75); minor base C (1/0); total (87/75) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 169 total aligned reads displayed.
GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA > NC_000913/3100513‑3100692
|
gACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGt < 2:2032790/93‑1 (MQ=255)
acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc > 2:560956/1‑93 (MQ=255)
acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc < 2:4499199/93‑1 (MQ=255)
acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc < 2:3800332/93‑1 (MQ=255)
acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc < 2:2392082/93‑1 (MQ=255)
acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc > 2:2723403/1‑93 (MQ=255)
acacATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTc > 1:196232/1‑93 (MQ=255)
cacaTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTcc > 2:1045140/1‑93 (MQ=255)
caTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTg > 2:2462464/1‑93 (MQ=255)
aTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGc < 1:1095398/93‑1 (MQ=255)
aTCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGc > 1:1891956/1‑93 (MQ=255)
cACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTc < 2:3184852/93‑1 (MQ=255)
aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa < 1:3210910/93‑1 (MQ=255)
aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa < 2:2317078/93‑1 (MQ=255)
aCGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCa > 2:2979669/1‑93 (MQ=255)
cgcgCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAg > 1:1913143/1‑93 (MQ=255)
gcgcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAgg < 1:833176/93‑1 (MQ=255)
gcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGc > 2:3661043/1‑93 (MQ=255)
gcAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGc > 1:3069466/1‑93 (MQ=255)
cAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCg > 2:206536/1‑93 (MQ=255)
cAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCAATTCAATGCCGAGGAGGTCCTGCTCAgggtg < 2:2285663/93‑3 (MQ=255)
ttGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCt < 2:3773727/93‑1 (MQ=255)
ttGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCt < 1:1446860/93‑1 (MQ=255)
ttGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCt > 2:3922576/1‑93 (MQ=255)
ttGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCt < 2:789034/93‑1 (MQ=255)
ttAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAg > 1:2490732/1‑93 (MQ=255)
ttAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAg < 1:572727/93‑1 (MQ=255)
ttAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAg > 2:2198283/1‑93 (MQ=255)
ttAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAg < 1:2852717/93‑1 (MQ=255)
ttAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAg > 1:176601/1‑93 (MQ=255)
tAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGc > 2:1781600/1‑93 (MQ=255)
tAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGc > 1:3855844/1‑93 (MQ=255)
aaCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCa > 1:4181298/1‑93 (MQ=255)
aCCTTCTTCATGCGCAGAAGCCAGGCACGCACCACCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAt < 1:1042333/93‑1 (MQ=255)
aCCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAt > 2:1877944/1‑93 (MQ=255)
ccTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAtt < 1:3324504/93‑1 (MQ=255)
ccTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAtt > 1:2746741/1‑93 (MQ=255)
ccTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAtt > 2:3965809/1‑93 (MQ=255)
ccTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCAtt > 1:1348381/1‑93 (MQ=255)
cttcttCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTg > 1:1185853/1‑93 (MQ=255)
cttcttCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTg > 1:30971/1‑93 (MQ=255)
cttcttCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTg < 2:3962785/93‑1 (MQ=255)
tcttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGcc < 1:4623528/93‑1 (MQ=255)
cttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGGCCTGCTCCGGGCGATCTTTAGCCATTGcca > 2:429636/1‑93 (MQ=255)
ttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGccac > 2:2617084/1‑93 (MQ=255)
ttcATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGccac > 2:4162563/1‑93 (MQ=255)
cATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGccacca < 2:1995499/93‑1 (MQ=255)
tGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGc > 1:657146/1‑93 (MQ=255)
cgcAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGCCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCgc > 2:1931172/1‑92 (MQ=255)
gcAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGAc > 2:3283777/1‑93 (MQ=255)
cAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACg > 1:2570793/1‑93 (MQ=255)
aGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGc < 1:987891/93‑1 (MQ=255)
gAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcc > 1:2116303/1‑93 (MQ=255)
gAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcc > 1:1023749/1‑93 (MQ=255)
gAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcc > 2:1796425/1‑93 (MQ=255)
aGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGcccc > 1:1458676/1‑93 (MQ=255)
gCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGccccc > 1:610505/1‑93 (MQ=255)
gCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGccccc > 1:1190927/1‑93 (MQ=255)
ccAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCa < 1:3072810/93‑1 (MQ=255)
ccAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCa < 2:468077/93‑1 (MQ=255)
ccAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCa < 1:2382847/93‑1 (MQ=255)
ccAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCa < 1:3871509/93‑1 (MQ=255)
cAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAt > 2:3667072/1‑93 (MQ=255)
aGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATg > 2:749391/1‑93 (MQ=255)
ggCACGCACCAACACCCGGTGGATGCACTTCAATGCCGAGGACGCCCTGCTCAGCGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGc > 2:1561989/1‑93 (MQ=255)
gcacgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGcc < 2:4431712/93‑1 (MQ=255)
cgcacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCaaa < 2:3137210/93‑1 (MQ=255)
cacCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAAc > 2:581447/1‑93 (MQ=255)
cAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCaa > 2:1523692/1‑93 (MQ=255)
cAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCaa < 1:1650488/93‑1 (MQ=255)
aCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtc > 2:217613/1‑93 (MQ=255)
aCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtc > 2:3443844/1‑93 (MQ=255)
cGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtct < 1:3187222/93‑1 (MQ=255)
gCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAtctc < 2:4076838/93‑1 (MQ=255)
ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa < 2:3403612/93‑1 (MQ=255)
ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa < 2:1449114/93‑1 (MQ=255)
ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa < 2:3682994/93‑1 (MQ=255)
ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa < 2:2033719/93‑1 (MQ=255)
ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa > 2:1990953/1‑93 (MQ=255)
ccGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTGAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCaa < 1:3380185/93‑1 (MQ=255)
cGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAg > 1:3006724/1‑93 (MQ=255)
ggTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGc > 2:3130810/1‑93 (MQ=255)
ggTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGc < 2:2759472/93‑1 (MQ=255)
gTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCg > 2:2639163/1‑93 (MQ=255)
gAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTc < 1:3480127/93‑1 (MQ=255)
aTGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAc < 2:3903516/93‑1 (MQ=255)
tGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAcc > 1:1782119/1‑93 (MQ=255)
tGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCAcc < 1:3683821/93‑1 (MQ=255)
cTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCACAACCAATCTCAAGCGTCACCGgcg > 2:1280122/1‑93 (MQ=255)
cTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgcg > 2:3340819/1‑93 (MQ=255)
ttCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgcgc < 1:523045/93‑1 (MQ=255)
ttCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGgcgc < 1:4074236/93‑1 (MQ=255)
tCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCt < 2:2117208/93‑1 (MQ=255)
aaTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTc < 2:1082625/93‑1 (MQ=255)
aaTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTc > 2:4515393/1‑93 (MQ=255)
aTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCa > 1:3821168/1‑93 (MQ=255)
aTGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCa < 2:1777049/93‑1 (MQ=255)
tGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCAc < 2:1658356/93‑1 (MQ=255)
cGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGc > 1:1507181/1‑93 (MQ=255)
ggAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCaa > 2:1264480/1‑93 (MQ=255)
|
GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAA > NC_000913/3100513‑3100692
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAAG > NC_000913/3100510‑3100696
|
CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAG < SRR4302535.730529/94‑1 (MQ=60)
CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAG < SRR4302535.417112/94‑1 (MQ=60)
GTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGG > SRR4302535.3378034/1‑94 (MQ=60)
GTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGG > SRR4302535.4478229/1‑94 (MQ=60)
TGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGT < SRR4302535.3802053/94‑1 (MQ=60)
TGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGT < SRR4302535.2498569/94‑1 (MQ=60)
GACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTC > SRR4302535.197582/1‑94 (MQ=60)
ACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCTAGGAGGTCCTG < SRR4302535.810548/94‑1 (MQ=60)
CATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGC > SRR4302535.1905580/1‑94 (MQ=60)
ATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCT < SRR4302535.1103193/94‑1 (MQ=60)
ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG > SRR4302535.1926928/1‑94 (MQ=60)
ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG < SRR4302535.3233150/94‑1 (MQ=60)
ACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAG < SRR4302535.3292304/94‑1 (MQ=60)
GCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGG < SRR4302535.839014/94‑1 (MQ=60)
CGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGC > SRR4302535.3090903/1‑94 (MQ=60)
CGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGC < SRR4302535.1960141/94‑1 (MQ=60)
GGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATC > SRR4302535.2564291/1‑94 (MQ=60)
TTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTT < SRR4302535.1457208/94‑1 (MQ=60)
GCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTA > SRR4302535.4061434/1‑94 (MQ=60)
CTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAG > SRR4302535.2508699/1‑94 (MQ=60)
CTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAG > SRR4302535.638127/1‑94 (MQ=60)
CTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAG > SRR4302535.177828/1‑94 (MQ=60)
TTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC < SRR4302535.576748/94‑1 (MQ=60)
TTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC < SRR4302535.2872927/94‑1 (MQ=60)
TTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGC > SRR4302535.3882394/1‑94 (MQ=60)
AAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCA > SRR4302535.3351748/1‑94 (MQ=60)
AAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCA > SRR4302535.4209913/1‑94 (MQ=60)
ACCTTCTTCATGCGCAGAAGCCAGGCACGCACCACCGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATT < SRR4302535.1049722/94‑1 (MQ=60)
ACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATT > SRR4302535.1358012/1‑94 (MQ=60)
ACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATT > SRR4302535.2766321/1‑94 (MQ=60)
CCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTG < SRR4302535.3347637/94‑1 (MQ=60)
CCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTG > SRR4302535.31210/1‑94 (MQ=60)
CCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTG > SRR4302535.1194323/1‑94 (MQ=60)
TTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCC > SRR4302535.3847082/1‑94 (MQ=60)
TCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCA < SRR4302535.4654929/94‑1 (MQ=60)
CTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCAC > SRR4302535.1486693/1‑94 (MQ=60)
CTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCAC < SRR4302535.1005596/94‑1 (MQ=60)
CATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAG > SRR4302535.239764/1‑94 (MQ=60)
ATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGC > SRR4302535.661731/1‑94 (MQ=60)
CGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGAC < SRR4302535.2089487/94‑1 (MQ=60)
GCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACG > SRR4302535.2589275/1‑94 (MQ=60)
GCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACG > SRR4302535.29120/1‑94 (MQ=60)
AGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCC > SRR4302535.3850869/1‑94 (MQ=60)
AGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCC < SRR4302535.994910/94‑1 (MQ=60)
AGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCC > SRR4302535.1031023/1‑94 (MQ=60)
AGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCC > SRR4302535.2131573/1‑94 (MQ=60)
AAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCC > SRR4302535.1469119/1‑94 (MQ=60)
AGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCC > SRR4302535.1199452/1‑94 (MQ=60)
AGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCC > SRR4302535.614758/1‑94 (MQ=60)
GCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCA < SRR4302535.1193060/94‑1 (MQ=60)
CCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAT < SRR4302535.3094262/94‑1 (MQ=60)
CCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAT < SRR4302535.3898113/94‑1 (MQ=60)
CCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCAT < SRR4302535.2399959/94‑1 (MQ=60)
CAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATG < SRR4302535.1102157/94‑1 (MQ=60)
GCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAAC > SRR4302535.3094846/1‑94 (MQ=60)
GCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAAC < SRR4302535.259578/94‑1 (MQ=60)
CAACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAAT < SRR4302535.1662423/94‑1 (MQ=60)
ACGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCT < SRR4302535.3137913/94‑1 (MQ=60)
CGCCCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTC < SRR4302535.3209263/94‑1 (MQ=60)
CCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAG > SRR4302535.3027787/1‑94 (MQ=60)
CCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAG < SRR4302535.3030306/94‑1 (MQ=60)
CCGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTGAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAG < SRR4302535.3403686/94‑1 (MQ=60)
CGGTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGC < SRR4302535.1855691/94‑1 (MQ=60)
GTGAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGT > SRR4302535.476059/1‑94 (MQ=60)
GAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCA < SRR4302535.1403546/94‑1 (MQ=60)
GAATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCA < SRR4302535.3504304/94‑1 (MQ=60)
ATGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACC > SRR4302535.1795015/1‑94 (MQ=60)
TGCACTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCG < SRR4302535.3709309/94‑1 (MQ=60)
CTTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGC > SRR4302535.4137193/1‑94 (MQ=60)
TTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCT < SRR4302535.526704/94‑1 (MQ=60)
TTCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCT < SRR4302535.4102111/94‑1 (MQ=60)
TCAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTT > SRR4302535.1551792/1‑94 (MQ=60)
CAATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTC > SRR4302535.1342019/1‑94 (MQ=60)
AATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCA > SRR4302535.562622/1‑94 (MQ=60)
AATGCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCA > SRR4302535.3847531/1‑94 (MQ=60)
GCCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGG > SRR4302535.3467152/1‑94 (MQ=60)
CCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGC > SRR4302535.1518017/1‑94 (MQ=60)
CCGAGGAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGC > SRR4302535.1794286/1‑94 (MQ=60)
GAGGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAA > SRR4302535.3707292/1‑94 (MQ=60)
GGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAAG < SRR4302535.4057710/94‑1 (MQ=60)
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CGTGACACATCACGCGCAGGTTGCTTAAACCTTCTTCATGCGCAGAAGCCAGGCACGCACCAACGCCCGGTGAATGCACTTCAATGCCGAGGAAGTCCTGCTCAGGGCGATCTTTAGCCATTGCCACCAGCGACGCCCCCATGCCAAAACCAATCTCAAGCGTCACCGGCGCTTCACGGCCAAAAAG > NC_000913/3100510‑3100696
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
