Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,127,469 |
G→A |
G254G (GGC→GGT) |
b2981 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,127,469 | 0 | G | A | 99.5%
| 674.7
/ NA
| 193 | G254G (GGC→GGT) | b2981 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (119/73); minor base C (0/1); total (119/74) |
| Fisher's exact test for biased strand distribution p-value = 3.83e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 198 total aligned reads displayed.
GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT > NC_000913/3127379‑3127558
|
gTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAcc > 1:1233821/1‑93 (MQ=255)
gTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAcc > 1:1608288/1‑93 (MQ=255)
ttCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAccc < 2:306983/93‑1 (MQ=255)
tCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCa < 1:3903415/93‑1 (MQ=255)
aaGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTc > 2:1522665/1‑93 (MQ=255)
aGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcg > 2:1984136/1‑93 (MQ=255)
gCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcgc > 2:188891/1‑93 (MQ=255)
ccGACAATAAACGCTCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcgcg > 1:2754061/1‑93 (MQ=255)
ccGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCACATATTTAAGTTGATCACCCATGGTcgcg > 1:3955472/1‑93 (MQ=255)
cGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGa > 1:3564101/1‑93 (MQ=255)
gACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGaa < 1:4338200/93‑1 (MQ=255)
cAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAtt < 2:695503/93‑1 (MQ=255)
aaTAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTc < 1:459467/93‑1 (MQ=255)
aaTAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTc > 1:3520800/1‑93 (MQ=255)
aTAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCa > 1:3773583/1‑93 (MQ=255)
tAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAt > 2:3469178/1‑93 (MQ=255)
aaCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGt > 2:4652819/1‑93 (MQ=255)
aaCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGt > 1:1420403/1‑93 (MQ=255)
aCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGtt > 2:2132978/1‑93 (MQ=255)
aCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGtt < 2:107065/93‑1 (MQ=255)
aCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGtt < 1:4269893/93‑1 (MQ=255)
cgcgCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTc < 2:2657085/93‑1 (MQ=255)
cgcgCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTc < 2:3178562/93‑1 (MQ=255)
gcgcAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCg < 2:3988386/93‑1 (MQ=255)
cgcAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCgg > 1:2179855/1‑93 (MQ=255)
gcAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGt < 2:1924218/93‑1 (MQ=255)
gggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTaaa > 2:1470957/1‑93 (MQ=255)
gTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACg > 1:2621368/1‑93 (MQ=255)
gAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca > 1:322812/1‑93 (MQ=255)
gAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca > 1:526802/1‑93 (MQ=255)
gAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca > 1:2367092/1‑93 (MQ=255)
aatcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACaa > 1:3415143/1‑93 (MQ=255)
aatcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACaa > 2:1276723/1‑93 (MQ=255)
aatcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACaa > 2:4501125/1‑93 (MQ=255)
atcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACaaa < 2:1707509/93‑1 (MQ=255)
aatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATcc > 2:1856046/1‑93 (MQ=255)
aatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATcc > 2:2941689/1‑93 (MQ=255)
atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc < 1:1948042/93‑1 (MQ=255)
atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc > 2:2156589/1‑93 (MQ=255)
atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc > 1:3395611/1‑93 (MQ=255)
atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc < 2:4348884/93‑1 (MQ=255)
atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc < 1:448356/93‑1 (MQ=255)
atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACACATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc > 2:356590/1‑93 (MQ=255)
tctcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATcccc > 1:2255831/1‑93 (MQ=255)
ctcAGCGAGATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCa < 2:181131/93‑1 (MQ=255)
tcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGTTAAACGGCACAAATCCCCAg > 2:2227264/1‑93 (MQ=255)
tcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAg < 2:3352478/93‑1 (MQ=255)
cGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCCTGGACGCGAATTCATGTTCGGTAAAAGGCACAAATCACAAGgtgt > 2:926802/1‑93 (MQ=255)
gATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTtgtg > 1:608153/1‑93 (MQ=255)
gATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTtgtg > 1:1852191/1‑93 (MQ=255)
atatAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgc > 2:489273/1‑93 (MQ=255)
atatAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgc > 2:845618/1‑93 (MQ=255)
atatAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgc > 2:2352910/1‑93 (MQ=255)
atatAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgc < 1:2101285/93‑1 (MQ=255)
atatAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgc < 1:2935142/93‑1 (MQ=255)
tataGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgct > 2:4316792/1‑93 (MQ=255)
taGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgctgc > 1:1976889/1‑93 (MQ=255)
gatgatATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcca < 1:4248572/93‑1 (MQ=255)
gATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcca > 2:3925608/1‑93 (MQ=255)
aTCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccag > 2:955772/1‑93 (MQ=255)
tCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagc > 2:1860014/1‑93 (MQ=255)
atatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagcca < 1:1672334/93‑1 (MQ=255)
tCGTCCGGCACCAGATATTTAAGTTGATTACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag > 2:2526693/1‑93 (MQ=255)
tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag > 1:1032695/1‑93 (MQ=255)
tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag > 1:1540701/1‑93 (MQ=255)
tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag > 1:1913753/1‑93 (MQ=255)
cGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGt < 1:2776260/93‑1 (MQ=255)
cGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGt < 1:128402/93‑1 (MQ=255)
cGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGt < 1:2596703/93‑1 (MQ=255)
tCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTg > 2:632597/1‑93 (MQ=255)
ggCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGaaa < 1:1018817/93‑1 (MQ=255)
ggCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGaaa > 1:1656265/1‑93 (MQ=255)
ggCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGaaa < 1:663420/93‑1 (MQ=255)
gCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGaaaa > 1:2716267/1‑93 (MQ=255)
cACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCGCCAGTTGTGCTGCCAGCCAGAGTTGAAAAt > 2:3614455/1‑93 (MQ=255)
tccAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGaaaagc < 2:590041/92‑3 (MQ=255)
aCCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtc > 1:3736102/1‑93 (MQ=255)
ccAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtct < 1:48981/93‑1 (MQ=255)
ccAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtct > 1:4097445/1‑93 (MQ=255)
cAGATATTTAAGTTGATCCCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtctc < 1:1571728/93‑1 (MQ=255)
cAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtctc > 2:3833918/1‑93 (MQ=255)
cAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtctc > 2:974249/1‑93 (MQ=255)
cAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtctc > 1:872277/1‑93 (MQ=255)
aGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCa > 2:4246632/1‑93 (MQ=255)
aGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCa > 2:331704/1‑93 (MQ=255)
gATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAc < 2:1146256/93‑1 (MQ=255)
gATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAc < 1:4109628/93‑1 (MQ=255)
gATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAc > 2:4463901/1‑93 (MQ=255)
gATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAc < 2:898772/93‑1 (MQ=255)
gATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAc > 2:2890491/1‑93 (MQ=255)
atatTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACg < 1:2214012/93‑1 (MQ=255)
atatTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACg > 2:2629671/1‑93 (MQ=255)
aaGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGAt < 2:2287668/93‑1 (MQ=255)
aGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATc < 2:957882/93‑1 (MQ=255)
gTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCt < 2:1804567/93‑1 (MQ=255)
tGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGc > 1:4202913/1‑93 (MQ=255)
gATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCa > 1:3163827/1‑93 (MQ=255)
aTCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAt < 1:3029032/93‑1 (MQ=255)
aTCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAt < 1:717547/93‑1 (MQ=255)
aTCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAt < 2:1641009/93‑1 (MQ=255)
|
GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT > NC_000913/3127379‑3127558
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT > NC_000913/3127377‑3127562
|
ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAC < SRR4302535.28272/94‑1 (MQ=60)
TGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGTTCACC > SRR4302535.3506681/1‑94 (MQ=60)
TGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACC > SRR4302535.1242640/1‑94 (MQ=60)
TGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACC > SRR4302535.1619887/1‑94 (MQ=60)
TCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT < SRR4302535.3930154/94‑1 (MQ=60)
CGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATG > SRR4302535.2251204/1‑94 (MQ=60)
CAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTC > SRR4302535.3254080/1‑94 (MQ=60)
CAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTC < SRR4302535.2736983/94‑1 (MQ=60)
AAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCG > SRR4302535.140270/1‑94 (MQ=60)
GCCGACAATAAACGCTCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCG > SRR4302535.2773691/1‑94 (MQ=60)
GCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCACATATTTAAGTTGATCACCCATGGTCGCG > SRR4302535.3982480/1‑94 (MQ=60)
CCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGA > SRR4302535.3588813/1‑94 (MQ=60)
GACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAT < SRR4302535.4367868/94‑1 (MQ=60)
GACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAT < SRR4302535.543740/94‑1 (MQ=60)
CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC > SRR4302535.3545253/1‑94 (MQ=60)
AATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCA < SRR4302535.462679/94‑1 (MQ=60)
AATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCA > SRR4302535.3799611/1‑94 (MQ=60)
AATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATCGTCGCGAATTCA > SRR4302535.1936365/1‑94 (MQ=60)
AAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGT > SRR4302535.1430544/1‑94 (MQ=60)
AAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGT > SRR4302535.2218573/1‑94 (MQ=60)
ACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTC < SRR4302535.4299127/94‑1 (MQ=60)
GCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGG > SRR4302535.2195415/1‑94 (MQ=60)
CAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAA < SRR4302535.1564410/94‑1 (MQ=60)
AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA > SRR4302535.2807940/1‑94 (MQ=60)
AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA > SRR4302535.456052/1‑94 (MQ=60)
GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG < SRR4302535.188642/94‑1 (MQ=60)
GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG > SRR4302535.2640163/1‑94 (MQ=60)
GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG > SRR4302535.716741/1‑94 (MQ=60)
TGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGC > SRR4302535.2624041/1‑94 (MQ=60)
TGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA > SRR4302535.343033/1‑94 (MQ=60)
AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA > SRR4302535.2384084/1‑94 (MQ=60)
AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA > SRR4302535.325044/1‑94 (MQ=60)
AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA > SRR4302535.530481/1‑94 (MQ=60)
GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTACACGGCACAA > SRR4302535.1669707/1‑94 (MQ=60)
GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA > SRR4302535.3438900/1‑94 (MQ=60)
AATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAA > SRR4302535.3790797/1‑94 (MQ=60)
ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT > SRR4302535.3187358/1‑94 (MQ=60)
ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT > SRR4302535.49529/1‑94 (MQ=60)
TCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATC < SRR4302535.3939419/94‑1 (MQ=60)
CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC > SRR4302535.1237294/1‑94 (MQ=60)
AATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCC > SRR4302535.3419235/1‑94 (MQ=60)
AATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCC > SRR4302535.465310/1‑94 (MQ=60)
ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC < SRR4302535.4179991/94‑1 (MQ=60)
ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC < SRR4302535.451498/94‑1 (MQ=60)
ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC > SRR4302535.3134100/1‑94 (MQ=60)
ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC < SRR4302535.1962067/94‑1 (MQ=60)
ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC > SRR4302535.2271892/1‑94 (MQ=60)
TCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCA < SRR4302535.4321317/94‑1 (MQ=60)
CGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTG > SRR4302535.1865536/1‑94 (MQ=60)
CGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTG > SRR4302535.612394/1‑94 (MQ=60)
CGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTG > SRR4302535.3562360/1‑94 (MQ=60)
CGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTG < SRR4302535.1975905/94‑1 (MQ=60)
GATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGC > SRR4302535.1597058/1‑94 (MQ=60)
ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT < SRR4302535.2955798/94‑1 (MQ=60)
ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT < SRR4302535.821895/94‑1 (MQ=60)
ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT > SRR4302535.4284495/1‑94 (MQ=60)
ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT < SRR4302535.2116438/94‑1 (MQ=60)
ATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGC > SRR4302535.1991127/1‑94 (MQ=60)
ATAGATCATATCGTCCGGCACCAGATACTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGC > SRR4302535.208111/1‑94 (MQ=60)
TAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCC < SRR4302535.1822975/94‑1 (MQ=60)
AGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCA < SRR4302535.2572921/94‑1 (MQ=60)
GATGATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAG < SRR4302535.4277671/94‑1 (MQ=60)
ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG < SRR4302535.1684438/94‑1 (MQ=60)
ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG > SRR4302535.1040031/1‑94 (MQ=60)
ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG > SRR4302535.1551806/1‑94 (MQ=60)
ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG > SRR4302535.1927546/1‑94 (MQ=60)
TCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGT < SRR4302535.4249064/94‑1 (MQ=60)
TCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGT < SRR4302535.4128831/94‑1 (MQ=60)
CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT < SRR4302535.129308/94‑1 (MQ=60)
CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT > SRR4302535.3655976/1‑94 (MQ=60)
CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT < SRR4302535.2615352/94‑1 (MQ=60)
CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT < SRR4302535.2319898/94‑1 (MQ=60)
CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT < SRR4302535.2796025/94‑1 (MQ=60)
GTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTG > SRR4302535.651287/1‑94 (MQ=60)
CGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAA > SRR4302535.1668244/1‑94 (MQ=60)
GGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAA < SRR4302535.668055/94‑1 (MQ=60)
GGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAA < SRR4302535.1026054/94‑1 (MQ=60)
GGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAA > SRR4302535.2735672/1‑94 (MQ=60)
GCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAT < SRR4302535.2671802/94‑1 (MQ=60)
CACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATC > SRR4302535.3761961/1‑94 (MQ=60)
ACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCT > SRR4302535.4125491/1‑94 (MQ=60)
CCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTC < SRR4302535.49351/94‑1 (MQ=60)
CCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTC > SRR4302535.878457/1‑94 (MQ=60)
CAGATATTTAAGTTGATCCCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCA < SRR4302535.1583074/94‑1 (MQ=60)
CAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCA > SRR4302535.1621423/1‑94 (MQ=60)
CAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCA < SRR4302535.2186966/94‑1 (MQ=60)
CAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCA > SRR4302535.2789752/1‑94 (MQ=60)
AGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAC > SRR4302535.3037120/1‑94 (MQ=60)
GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACG < SRR4302535.4137765/94‑1 (MQ=60)
GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACG > SRR4302535.1243941/1‑94 (MQ=60)
ATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGC < SRR4302535.2229779/94‑1 (MQ=60)
ATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCACTCAGAGATGAAAATCTCACGCAG > SRR4302535.3899104/1‑94 (MQ=60)
TTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGC > SRR4302535.4231674/1‑94 (MQ=60)
TGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTTTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCA > SRR4302535.1473539/1‑94 (MQ=60)
TGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCA > SRR4302535.3185766/1‑94 (MQ=60)
GATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT < SRR4302535.3991405/94‑1 (MQ=60)
ATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCCCAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCACGATCTGCATC > SRR4302535.1857339/1‑94 (MQ=60)
ATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATC < SRR4302535.3050235/94‑1 (MQ=60)
ATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATC < SRR4302535.722587/94‑1 (MQ=60)
ATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATC < SRR4302535.4417185/94‑1 (MQ=60)
TCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCT < SRR4302535.3216629/94‑1 (MQ=60)
CACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTC > SRR4302535.2589272/1‑94 (MQ=60)
CACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTC < SRR4302535.672384/94‑1 (MQ=60)
CACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCAAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTC > SRR4302535.2717611/1‑94 (MQ=60)
ACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT > SRR4302535.1912492/1‑94 (MQ=60)
ACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT < SRR4302535.714381/94‑1 (MQ=60)
ACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT > SRR4302535.4132606/1‑94 (MQ=60)
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ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT > NC_000913/3127377‑3127562
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
