Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,127,469	G→A	G254G (GGC→GGT)	b2981 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,127,469	0	G	A	99.4%	1073.9 / NA	311	G254G (GGC→GGT)	b2981	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (169/140); minor base C (0/2); total (169/142)
Fisher's exact test for biased strand distribution p-value = 2.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 315 total aligned reads displayed.

TTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT  >  NC_000913/3127380‑3127558

ttCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAccc                                                                                        >  2:7241703/1‑93 (MQ=255)

ttCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAccc                                                                                        >  2:2888864/1‑93 (MQ=255)

ttCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAccc                                                                                        >  1:803520/1‑93 (MQ=255)

 tCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCa                                                                                       <  2:4159779/93‑1 (MQ=255)

 tCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCa                                                                                       <  1:7249279/93‑1 (MQ=255)

  cGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAt                                                                                      <  2:3509726/93‑1 (MQ=255)

  cGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAt                                                                                      <  2:2129444/93‑1 (MQ=255)

  cGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAt                                                                                      <  1:5267115/93‑1 (MQ=255)

   ggCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATg                                                                                     <  2:5399692/93‑1 (MQ=255)

    gCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATgg                                                                                    >  2:6904871/1‑93 (MQ=255)

      aaGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTc                                                                                  <  1:7763468/93‑1 (MQ=255)

      aaGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTc                                                                                  >  1:5941779/1‑93 (MQ=255)

      aaGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTc                                                                                  >  1:5132995/1‑93 (MQ=255)

       aGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcg                                                                                 >  2:7865828/1‑93 (MQ=255)

       aGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcg                                                                                 <  2:7625408/93‑1 (MQ=255)

        gCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcgc                                                                                >  1:305649/1‑93 (MQ=255)

        gCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcgc                                                                                >  2:5345798/1‑93 (MQ=255)

        gCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCAATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcgc                                                                                >  1:3650472/1‑93 (MQ=255)

         ccGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTcgcg                                                                               >  1:6917081/1‑93 (MQ=255)

          cGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGa                                                                              >  2:3086476/1‑93 (MQ=255)

          cGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGa                                                                              >  2:1102054/1‑93 (MQ=255)

           gACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGaa                                                                             >  1:3791037/1‑93 (MQ=255)

           gACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGaa                                                                             >  1:7344467/1‑93 (MQ=255)

            aCAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAt                                                                            >  1:7151272/1‑93 (MQ=255)

            aCAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAt                                                                            >  2:5606693/1‑93 (MQ=255)

            aCAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAt                                                                            >  1:4713707/1‑93 (MQ=255)

             cAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAtt                                                                           >  1:2029566/1‑93 (MQ=255)

             cAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAtt                                                                           <  1:5389556/93‑1 (MQ=255)

              aaTAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTc                                                                          >  1:4393146/1‑93 (MQ=255)

               aTAAACGCGCAGGGGGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCa                                                                         >  2:3818794/1‑93 (MQ=255)

                tAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAt                                                                        <  2:699765/93‑1 (MQ=255)

                tAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAt                                                                        <  1:701933/93‑1 (MQ=255)

                 aaaCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATg                                                                       >  1:2500596/1‑93 (MQ=255)

                   aCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGtt                                                                     <  2:5252058/93‑1 (MQ=255)

                   aCGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATCGTCGCGAATTCATGtt                                                                     <  2:5220203/93‑1 (MQ=255)

                          gggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTaaa                                                              <  1:288422/93‑1 (MQ=255)

                          gggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTaaa                                                              >  1:430475/1‑93 (MQ=255)

                          gggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTaaa                                                              >  2:4177162/1‑93 (MQ=255)

                           ggTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAc                                                             <  2:1262816/93‑1 (MQ=255)

                             tGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACgg                                                           <  1:1404862/93‑1 (MQ=255)

                             tGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACgg                                                           >  1:4518778/1‑93 (MQ=255)

                              gCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGc                                                          <  1:7081299/93‑1 (MQ=255)

                                 gAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca                                                       <  1:2343274/93‑1 (MQ=255)

                                 gAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca                                                       >  1:1285134/1‑93 (MQ=255)

                                 gAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca                                                       >  1:3222964/1‑93 (MQ=255)

                                 gAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca                                                       >  2:2590708/1‑93 (MQ=255)

                                 gAATCAATCTCAGCGATATAGATCAGATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGcaca                                                       <  2:5471974/93‑1 (MQ=255)

                                  aatcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACaa                                                      >  1:5386003/1‑93 (MQ=255)

                                  aatcaatcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACaa                                                      <  2:3042876/93‑1 (MQ=255)

                                       atcTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATccc                                                 <  2:42838/93‑1 (MQ=255)

                                         ctcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCa                                               <  1:3963864/93‑1 (MQ=255)

                                         ctcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCa                                               <  1:6287935/93‑1 (MQ=255)

                                          tcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCat                                              >  1:6025214/1‑92 (MQ=255)

                                          tcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAg                                              >  1:5702783/1‑93 (MQ=255)

                                          tcAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAg                                              >  2:7414411/1‑93 (MQ=255)

                                            aGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGtt                                            <  2:6471783/93‑1 (MQ=255)

                                               gATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTtgtg                                         >  2:7500548/1‑93 (MQ=255)

                                                atatAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGATCGGTAAACGGCACAAATCCCCAGTTGtgc                                        <  1:3478333/93‑1 (MQ=255)

                                                 tataGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgct                                       >  1:3947386/1‑93 (MQ=255)

                                                 tataGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGtgct                                       <  2:1492257/93‑1 (MQ=255)

                                                    aGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcc                                    >  1:1078585/1‑93 (MQ=255)

                                                     gATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcca                                   >  1:4182131/1‑93 (MQ=255)

                                                     gATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcca                                   >  1:4666951/1‑93 (MQ=255)

                                                     gATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcca                                   <  2:7322974/93‑1 (MQ=255)

                                                     gATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgcca                                   >  1:2637360/1‑93 (MQ=255)

                                                      aTCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccag                                  >  1:7513008/1‑93 (MQ=255)

                                                      aTCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccag                                  <  1:7667247/93‑1 (MQ=255)

                                                       tCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagc                                 >  1:5516928/1‑93 (MQ=255)

                                                        cATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagcc                                >  2:4679157/1‑93 (MQ=255)

                                                        cATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagcc                                >  1:1666623/1‑93 (MQ=255)

                                                         atatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagcca                               <  2:5743012/93‑1 (MQ=255)

                                                         atatCCACCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTgccagcca                               <  1:6676919/93‑1 (MQ=255)

                                                          tatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGccagccag                              >  1:1931534/1‑93 (MQ=255)

                                                          tatCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGGTGGCCTGcccgccag                              >  2:2012163/1‑93 (MQ=255)

                                                           atCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCaga                             >  2:1644783/1‑93 (MQ=255)

                                                           atCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCaga                             <  2:3564160/93‑1 (MQ=255)

                                                           atCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCaga                             <  2:4827395/93‑1 (MQ=255)

                                                            tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag                            >  2:1755593/1‑93 (MQ=255)

                                                            tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag                            <  1:6491362/93‑1 (MQ=255)

                                                            tCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCagag                            >  1:1177781/1‑93 (MQ=255)

                                                              gTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGtt                          <  2:2327145/93‑1 (MQ=255)

                                                               tCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTg                         >  1:2147461/1‑93 (MQ=255)

                                                                    cACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAt                    >  2:2451657/1‑93 (MQ=255)

                                                                     aCCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtc                   <  2:5899206/93‑1 (MQ=255)

                                                                     aCCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAtc                   <  2:6721938/93‑1 (MQ=255)

                                                                        aGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCa                <  1:3582423/93‑1 (MQ=255)

                                                                        aGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCa                <  1:6122836/93‑1 (MQ=255)

                                                                          atatTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCAAGTTGAGCTGCCAGCCAGAGTTGAAAACATCACg              >  1:1730317/1‑93 (MQ=255)

                                                                           tatTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGc             >  2:3411144/1‑93 (MQ=255)

                                                                            atTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCa            >  2:5587190/1‑93 (MQ=255)

                                                                            atTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCa            >  1:505968/1‑93 (MQ=255)

                                                                             tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCGGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           <  2:3222962/93‑1 (MQ=255)

                                                                             tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           >  2:1796689/1‑93 (MQ=255)

                                                                             tttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAg           <  2:2683878/93‑1 (MQ=255)

                                                                              ttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAgg          <  2:190597/93‑1 (MQ=255)

                                                                              ttAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAgg          <  1:154213/93‑1 (MQ=255)

                                                                               tAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGa         <  1:300157/93‑1 (MQ=255)

                                                                                aaGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGAt        <  2:6139284/93‑1 (MQ=255)

                                                                                  gTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCt      >  2:1956520/1‑93 (MQ=255)

                                                                                    tGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGc    >  2:5503075/1‑93 (MQ=255)

TTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT  >  NC_000913/3127380‑3127558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  >  NC_000913/3127376‑3127562

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCA                                                                                               >  SRR4302543.1679811/1‑94 (MQ=60)

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCA                                                                                               <  SRR4302543.3530941/94‑1 (MQ=60)

 ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAC                                                                                              >  SRR4302543.881689/1‑94 (MQ=60)

 ATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCAC                                                                                              >  SRR4302543.4702133/1‑94 (MQ=60)

   GTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCC                                                                                            >  SRR4302543.810588/1‑94 (MQ=60)

    TTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCA                                                                                           >  SRR4302543.4385531/1‑94 (MQ=60)

     TCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT                                                                                          <  SRR4302543.6862847/94‑1 (MQ=60)

     TCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT                                                                                          <  SRR4302543.1218428/94‑1 (MQ=60)

     TCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT                                                                                          <  SRR4302543.3678781/94‑1 (MQ=60)

     TCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT                                                                                          >  SRR4302543.7017209/1‑94 (MQ=60)

     TCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT                                                                                          <  SRR4302543.7319395/94‑1 (MQ=60)

     TAGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCAT                                                                                          <  SRR4302543.2010220/94‑1 (MQ=60)

      CGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATG                                                                                         <  SRR4302543.5495498/94‑1 (MQ=60)

      CGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATG                                                                                         <  SRR4302543.5314633/94‑1 (MQ=60)

       GGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGG                                                                                        <  SRR4302543.1522158/94‑1 (MQ=60)

       GGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGG                                                                                        >  SRR4302543.52967/1‑94 (MQ=60)

        GCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGGCCGGCACCAGATATTTAAGTTGATCACCCATGGT                                                                                       >  SRR4302543.5947302/1‑94 (MQ=60)

         CAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTC                                                                                      >  SRR4302543.5179391/1‑94 (MQ=60)

         CAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTC                                                                                      >  SRR4302543.5996149/1‑94 (MQ=60)

         CAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTC                                                                                      >  SRR4302543.2387442/1‑94 (MQ=60)

          AAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCG                                                                                     <  SRR4302543.7836731/94‑1 (MQ=60)

          AAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCG                                                                                     <  SRR4302543.7836733/94‑1 (MQ=60)

          AAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCG                                                                                     >  SRR4302543.7977215/1‑94 (MQ=60)

           AGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGC                                                                                    >  SRR4302543.308411/1‑94 (MQ=60)

           AGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGC                                                                                    >  SRR4302543.1177844/1‑94 (MQ=60)

           AGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGC                                                                                    >  SRR4302543.4713453/1‑94 (MQ=60)

           AGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCAATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGC                                                                                    >  SRR4302543.3682551/1‑94 (MQ=60)

            GCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCG                                                                                   >  SRR4302543.2877517/1‑94 (MQ=60)

            GCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCG                                                                                   >  SRR4302543.6982108/1‑94 (MQ=60)

            GCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCG                                                                                   <  SRR4302543.4067039/94‑1 (MQ=60)

              CGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAA                                                                                 >  SRR4302543.7415124/1‑94 (MQ=60)

              CGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAA                                                                                 >  SRR4302543.3824438/1‑94 (MQ=60)

               GACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAT                                                                                >  SRR4302543.7220780/1‑94 (MQ=60)

               GACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAAT                                                                                >  SRR4302543.4756780/1‑94 (MQ=60)

                ACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATT                                                                               >  SRR4302543.2047809/1‑94 (MQ=60)

                 CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              <  SRR4302543.5438539/94‑1 (MQ=60)

                 CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              <  SRR4302543.3073720/94‑1 (MQ=60)

                 CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              >  SRR4302543.4432975/1‑94 (MQ=60)

                 CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              >  SRR4302543.3327661/1‑94 (MQ=60)

                 CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              >  SRR4302543.3422500/1‑94 (MQ=60)

                 CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              >  SRR4302543.5929805/1‑94 (MQ=60)

                 CAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              >  SRR4302543.3002131/1‑94 (MQ=60)

                 AAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTC                                                                              <  SRR4302543.5438540/94‑1 (MQ=60)

                  AATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCA                                                                             >  SRR4302543.7198621/1‑94 (MQ=60)

                  AATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCA                                                                             >  SRR4302543.1948395/1‑94 (MQ=60)

                  AATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCA                                                                             >  SRR4302543.7475174/1‑94 (MQ=60)

                   ATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAT                                                                            <  SRR4302543.5605268/94‑1 (MQ=60)

                   ATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAT                                                                            <  SRR4302543.2090404/94‑1 (MQ=60)

                   ATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAT                                                                            <  SRR4302543.2552488/94‑1 (MQ=60)

                   ATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCAT                                                                            >  SRR4302543.2196097/1‑94 (MQ=60)

                    TAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATG                                                                           <  SRR4302543.708344/94‑1 (MQ=60)

                    TAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATG                                                                           >  SRR4302543.2523293/1‑94 (MQ=60)

                     AAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGT                                                                          <  SRR4302543.6467650/94‑1 (MQ=60)

                     AAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGT                                                                          <  SRR4302543.7127907/94‑1 (MQ=60)

                     AAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCACGGTCGCGCATTCATGT                                                                          >  SRR4302543.6933777/1‑94 (MQ=60)

                      AACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTT                                                                         <  SRR4302543.3678510/94‑1 (MQ=60)

                       ACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTC                                                                        <  SRR4302543.7152810/94‑1 (MQ=60)

                             AGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA                                                                  >  SRR4302543.434510/1‑94 (MQ=60)

                              GGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAAC                                                                 <  SRR4302543.290993/94‑1 (MQ=60)

                               GGTGCAGAATCAATCTCAGCTATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG                                                                >  SRR4302543.130191/1‑94 (MQ=60)

                               GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG                                                                >  SRR4302543.4303454/1‑94 (MQ=60)

                               GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG                                                                <  SRR4302543.500004/94‑1 (MQ=60)

                               GGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACG                                                                <  SRR4302543.6087824/94‑1 (MQ=60)

                                GTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGG                                                               >  SRR4302543.4570942/1‑94 (MQ=60)

                                GTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGG                                                               >  SRR4302543.4559876/1‑94 (MQ=60)

                                 TGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGC                                                              <  SRR4302543.1417547/94‑1 (MQ=60)

                                 TGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGC                                                              >  SRR4302543.3125555/1‑94 (MQ=60)

                                  GCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCA                                                             <  SRR4302543.7150067/94‑1 (MQ=60)

                                  GCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCA                                                             <  SRR4302543.635415/94‑1 (MQ=60)

                                   CAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCCCCCATGGTCGCGAATTCATGTTCGGTAAACGGCAC                                                            <  SRR4302543.768600/94‑1 (MQ=60)

                                   CAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCAC                                                            >  SRR4302543.3530819/1‑94 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           <  SRR4302543.5124207/94‑1 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           <  SRR4302543.5543502/94‑1 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           >  SRR4302543.1296592/1‑94 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           >  SRR4302543.1296591/1‑94 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACA                                                           >  SRR4302543.3252091/1‑94 (MQ=60)

                                    AGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGATGATCACCCATGGTCGCGAATTCATGTTCGGCAAACGGCACA                                                           >  SRR4302543.3252092/1‑94 (MQ=60)

                                     GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA                                                          >  SRR4302543.5434916/1‑94 (MQ=60)

                                     GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA                                                          <  SRR4302543.2364532/94‑1 (MQ=60)

                                     GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA                                                          >  SRR4302543.3049330/1‑94 (MQ=60)

                                     GAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAA                                                          >  SRR4302543.906140/1‑94 (MQ=60)

                                      AATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAA                                                         >  SRR4302543.245079/1‑94 (MQ=60)

                                       ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT                                                        <  SRR4302543.4125433/94‑1 (MQ=60)

                                       ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT                                                        <  SRR4302543.7688892/94‑1 (MQ=60)

                                       ATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAAT                                                        >  SRR4302543.4479424/1‑94 (MQ=60)

                                        TCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATC                                                       <  SRR4302543.5387348/94‑1 (MQ=60)

                                         CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC                                                      >  SRR4302543.3922361/1‑94 (MQ=60)

                                         CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC                                                      >  SRR4302543.1745443/1‑94 (MQ=60)

                                         CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC                                                      <  SRR4302543.7246446/94‑1 (MQ=60)

                                         CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC                                                      >  SRR4302543.6700567/1‑94 (MQ=60)

                                         CAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCC                                                      <  SRR4302543.6316987/94‑1 (MQ=60)

                                          AATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCC                                                     >  SRR4302543.4700326/1‑94 (MQ=60)

                                           ATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCC                                                    >  SRR4302543.5438535/1‑94 (MQ=60)

                                             CTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAT                                                  >  SRR4302543.6081299/1‑94 (MQ=60)

                                             CTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAG                                                  <  SRR4302543.3998972/94‑1 (MQ=60)

                                             CTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAG                                                  <  SRR4302543.6347156/94‑1 (MQ=60)

                                             CTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAG                                                  >  SRR4302543.1783249/1‑94 (MQ=60)

                                             CTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAG                                                  >  SRR4302543.5754798/1‑94 (MQ=60)

                                              TCAGCGATATAGATCAGATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGT                                                 >  SRR4302543.7780747/1‑94 (MQ=60)

                                                AGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTG                                               >  SRR4302543.6058769/1‑94 (MQ=60)

                                                  CGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTG                                             <  SRR4302543.538455/94‑1 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT                                           <  SRR4302543.3509491/94‑1 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT                                           >  SRR4302543.543667/1‑94 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCT                                           >  SRR4302543.3982281/1‑94 (MQ=60)

                                                    ATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGATCGGTAAACGGCACAAATCCCCAGTTGTGCT                                           <  SRR4302543.3509490/94‑1 (MQ=60)

                                                     TATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTG                                          >  SRR4302543.3810194/1‑94 (MQ=60)

                                                     TATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGCTAAACGtcataactccacagttgtgatc                                          >  SRR4302543.3810193/1‑72 (MQ=60)

                                                      ATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGC                                         >  SRR4302543.2770570/1‑94 (MQ=60)

                                                      ATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGC                                         >  SRR4302543.3886220/1‑94 (MQ=60)

                                                      ATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGC                                         <  SRR4302543.4678146/94‑1 (MQ=60)

                                                       TAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCC                                        >  SRR4302543.7341981/1‑94 (MQ=60)

                                                       TAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCC                                        >  SRR4302543.1088281/1‑94 (MQ=60)

                                                        AGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCA                                       >  SRR4302543.4220028/1‑94 (MQ=60)

                                                        AGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCA                                       >  SRR4302543.2661243/1‑94 (MQ=60)

                                                        AGATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCA                                       >  SRR4302543.4709486/1‑94 (MQ=60)

                                                         GATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAG                                      >  SRR4302543.7584768/1‑94 (MQ=60)

                                                         GATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAG                                      <  SRR4302543.6518365/94‑1 (MQ=60)

                                                          ATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGC                                     <  SRR4302543.7739911/94‑1 (MQ=60)

                                                          ATCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGC                                     >  SRR4302543.5567032/1‑94 (MQ=60)

                                                           TCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCC                                    >  SRR4302543.1103915/1‑94 (MQ=60)

                                                           TCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCC                                    >  SRR4302543.1681548/1‑94 (MQ=60)

                                                           TCATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAACCCCCAGTTGTGCTGCCcccc                                    >  SRR4302543.1681547/1‑90 (MQ=60)

                                                            CATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCA                                   >  SRR4302543.7365890/1‑94 (MQ=60)

                                                            CATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCA                                   >  SRR4302543.6141007/1‑94 (MQ=60)

                                                             ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  <  SRR4302543.3987011/94‑1 (MQ=60)

                                                             ATATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  >  SRR4302543.1948913/1‑94 (MQ=60)

                                                             ATATCCACCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAG                                  <  SRR4302543.6739953/94‑1 (MQ=60)

                                                              TATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGA                                 >  SRR4302543.4731251/1‑94 (MQ=60)

                                                               ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG                                >  SRR4302543.1188442/1‑94 (MQ=60)

                                                               ATCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAG                                <  SRR4302543.6232079/94‑1 (MQ=60)

                                                                TCGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGT                               <  SRR4302543.6552517/94‑1 (MQ=60)

                                                                 CGTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTT                              <  SRR4302543.2005719/94‑1 (MQ=60)

                                                                  GTCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTG                             >  SRR4302543.2166688/1‑94 (MQ=60)

                                                                   TCCGGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAACCCCCAGTTGTGCTGCCAGCCAGAGTTGA                            <  SRR4302543.1768800/94‑1 (MQ=60)

                                                                    CCCGCACCAGATATTTAAGTTGTTCACCCATGGTTGCGAATTCATGTTCGGCAAACGGCACAAATCCCCATTTGTGCTGCCAGCCAGAGTTGAA                           <  SRR4302543.4828095/94‑1 (MQ=60)

                                                                      GGCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAA                         <  SRR4302543.3709220/94‑1 (MQ=60)

                                                                       GCACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAAT                        <  SRR4302543.1554854/94‑1 (MQ=60)

                                                                        CACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTTTGTTGCCAGCCAGAGTTGAAAATT                       >  SRR4302543.2359314/1‑94 (MQ=60)

                                                                        CACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATC                       <  SRR4302543.816810/94‑1 (MQ=60)

                                                                        CACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAA‑GGCACAAATTCCCAGTTGTGCTTCCAACCAGAGgttgaaatct                      >  SRR4302543.5707038/1‑84 (MQ=60)

                                                                         ACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCT                      <  SRR4302543.7404753/94‑1 (MQ=60)

                                                                         ACCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCT                      <  SRR4302543.7240122/94‑1 (MQ=60)

                                                                          CCAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTC                     <  SRR4302543.5151431/94‑1 (MQ=60)

                                                                           CAGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCA                    >  SRR4302543.2132202/1‑94 (MQ=60)

                                                                            AGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAC                   <  SRR4302543.6180827/94‑1 (MQ=60)

                                                                            AGATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCAC                   <  SRR4302543.3614068/94‑1 (MQ=60)

                                                                             GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACG                  <  SRR4302543.6011146/94‑1 (MQ=60)

                                                                             GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACG                  >  SRR4302543.1745742/1‑94 (MQ=60)

                                                                             GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCAAGTTGAGCTGCCAGCCAGAGTTGAAAACATCACG                  >  SRR4302543.1745743/1‑94 (MQ=60)

                                                                             GATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCACCAGTTGTGCTGCAAGCCAGAGTTGAAAATCTCACG                  <  SRR4302543.1372123/94‑1 (MQ=60)

                                                                              ATATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGC                 >  SRR4302543.2914051/1‑94 (MQ=60)

                                                                               TATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCA                >  SRR4302543.510669/1‑94 (MQ=60)

                                                                               TATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCA                <  SRR4302543.1575689/94‑1 (MQ=60)

                                                                                ATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAG               <  SRR4302543.7548528/94‑1 (MQ=60)

                                                                                ATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAG               <  SRR4302543.7847694/94‑1 (MQ=60)

                                                                                ATTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAG               >  SRR4302543.2644544/1‑94 (MQ=60)

                                                                                 TTTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGG              <  SRR4302543.3983737/94‑1 (MQ=60)

                                                                                  TTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGA             <  SRR4302543.4536162/94‑1 (MQ=60)

                                                                                  TTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGA             <  SRR4302543.155542/94‑1 (MQ=60)

                                                                                  TTAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGA             >  SRR4302543.519743/1‑94 (MQ=60)

                                                                                   TAAGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGAT            <  SRR4302543.302855/94‑1 (MQ=60)

                                                                                     AGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCT          >  SRR4302543.7125230/1‑94 (MQ=60)

                                                                                     AGTTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCT          <  SRR4302543.4408180/94‑1 (MQ=60)

                                                                                       TTGATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGC        >  SRR4302543.3010103/1‑94 (MQ=60)

                                                                                         GATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT      >  SRR4302543.4328151/1‑94 (MQ=60)

                                                                                         GATCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCAT      <  SRR4302543.6733668/94‑1 (MQ=60)

                                                                                           TCACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCT    >  SRR4302543.4481973/1‑94 (MQ=60)

                                                                                            CACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTC   >  SRR4302543.111573/1‑94 (MQ=60)

                                                                                            CACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTC   <  SRR4302543.6039233/94‑1 (MQ=60)

                                                                                             ACCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  <  SRR4302543.2431859/94‑1 (MQ=60)

GATGTTCGGCAAGCCGACAATAAACGCGCAGGGTGCAGAATCAATCTCAGCGATATAGATCATATCGTCCGGCACCAGATATTTAAGTTGATCGCCCATGGTCGCGAATTCATGTTCGGTAAACGGCACAAATCCCCAGTTGTGCTGCCAGCCAGAGTTGAAAATCTCACGCAGGATCTGCATCTCT  >  NC_000913/3127376‑3127562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`