Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,255,885 |
(A)8→7 |
intergenic (‑288/+43) |
yhaO ← / ← yhaP |
putative transport system permease protein/putative L‑serine dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,255,878 | 0 | A | . | 100.0%
| 734.5
/ NA
| 160 | intergenic (‑281/+50) | yhaO/yhaP | putative transport system permease protein/putative L‑serine dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (96/64); total (96/64) |
Only 100 of 187 total aligned reads displayed.
ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA > NC_000913/3255786‑3255966
|
acaATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATcaca < 2:575727/93‑1 (MQ=255)
caATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaa > 2:3062151/1‑93 (MQ=255)
aaTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaa > 2:3630470/1‑93 (MQ=255)
aTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaa > 2:2420819/1‑93 (MQ=255)
aaGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaa < 2:1281374/93‑1 (MQ=255)
aaGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaa > 1:3591753/1‑93 (MQ=255)
aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag < 2:847964/93‑2 (MQ=255)
aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag > 2:1719137/1‑92 (MQ=255)
aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag > 2:3964867/1‑92 (MQ=255)
gACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaagg < 2:593956/93‑3 (MQ=255)
aCTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggt < 1:4148281/93‑4 (MQ=255)
aCTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggt < 2:387712/93‑4 (MQ=255)
cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg < 1:2145900/93‑5 (MQ=255)
cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg < 1:2145901/93‑5 (MQ=255)
cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg < 1:1314783/93‑5 (MQ=255)
cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg > 2:1181996/1‑89 (MQ=255)
ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGca > 1:1233957/1‑93 (MQ=255)
gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGcaca < 1:1655077/93‑1 (MQ=255)
gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGcaca > 1:690390/1‑93 (MQ=255)
aaTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAtt > 2:1717156/1‑93 (MQ=255)
aTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAttt > 2:4354969/1‑93 (MQ=255)
tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtg < 2:4075596/93‑1 (MQ=255)
aaCGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtgt < 1:289081/93‑1 (MQ=255)
cGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGc > 2:2247781/1‑93 (MQ=255)
cGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGc > 2:159184/1‑93 (MQ=255)
gagaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAc > 1:4353536/1‑93 (MQ=255)
agaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAcc > 2:910646/1‑93 (MQ=255)
gaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAccc > 1:2753356/1‑93 (MQ=255)
aTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCa > 2:1110407/1‑93 (MQ=255)
tGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCaa > 1:4578151/1‑93 (MQ=255)
ggATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAg < 2:2787885/93‑1 (MQ=255)
ggATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAg < 1:3449136/93‑1 (MQ=255)
ggATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAg < 2:4326065/93‑1 (MQ=255)
aTAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGa < 1:2771571/93‑1 (MQ=255)
aTAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGa < 2:3660644/93‑1 (MQ=255)
tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAt > 2:2320348/1‑93 (MQ=255)
tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAt < 1:742261/93‑1 (MQ=255)
aaTTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGaaa < 2:2493969/93‑1 (MQ=255)
ttttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGc < 1:3990998/93‑1 (MQ=255)
ttttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGc < 1:2254764/93‑1 (MQ=255)
tttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCt > 2:3396462/1‑93 (MQ=255)
tCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGa < 1:1015137/93‑1 (MQ=255)
tCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGa < 1:2612383/93‑1 (MQ=255)
ctactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAc < 2:2192918/93‑1 (MQ=255)
ctactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAACGTGCACATTTGTGCACCCAAGGATGAAAGCTGAc > 1:4616480/1‑93 (MQ=255)
tactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACa < 1:3877959/93‑1 (MQ=255)
actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg < 1:4397712/93‑1 (MQ=255)
actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg > 1:4480866/1‑93 (MQ=255)
actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg > 2:1961671/1‑93 (MQ=255)
taAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCa > 1:1467557/1‑93 (MQ=255)
aaaTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCaa > 1:1050102/1‑93 (MQ=255)
aaaTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCaa < 1:2030834/93‑1 (MQ=255)
ttAATCGCAGGAGAATATTCATTCTCTATTTGCGGCCGATC‑CCAACAAAAGGTGCACATTTGTGCACCCAGGGATGAAAGCTGGCAGCAACGt > 1:2175149/1‑93 (MQ=255)
ttAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGt > 1:2287937/1‑93 (MQ=255)
tAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGTTGACAGCAATGTc < 1:2384882/93‑1 (MQ=255)
aaTCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCa < 2:340473/93‑1 (MQ=255)
cGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGcc > 2:682772/1‑93 (MQ=255)
gCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCg > 1:1140812/1‑93 (MQ=255)
cAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGc < 1:2437272/93‑1 (MQ=255)
aGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa > 1:2672903/1‑93 (MQ=255)
ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCAGATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg > 1:1493573/1‑93 (MQ=255)
ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg > 2:71157/1‑93 (MQ=255)
ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg < 2:1813233/93‑1 (MQ=255)
ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg > 1:4666869/1‑93 (MQ=255)
agaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAc < 2:3455615/93‑1 (MQ=255)
gaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAcc < 2:2720127/93‑1 (MQ=255)
gaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAcc > 1:3271216/1‑93 (MQ=255)
atatTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc > 1:4234350/1‑93 (MQ=255)
atatTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc < 2:3005327/93‑1 (MQ=255)
ttcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt > 1:3078693/1‑93 (MQ=255)
tcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTa > 2:2946857/1‑93 (MQ=255)
cattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTaa < 2:3591454/93‑1 (MQ=255)
attcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt < 2:2625463/93‑1 (MQ=255)
attcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt < 1:1593856/93‑1 (MQ=255)
attcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt < 2:1518162/93‑1 (MQ=255)
tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg > 1:1883068/1‑93 (MQ=255)
tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg > 1:3753018/1‑93 (MQ=255)
tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg < 2:1005927/93‑1 (MQ=255)
tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg > 1:3278045/1‑93 (MQ=255)
tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg > 1:2430942/1‑93 (MQ=255)
tctcTATTTGCGGCAGATCAC‑AAAAAAAGGGGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg > 2:1999598/1‑93 (MQ=255)
ctctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGc < 1:3531978/93‑1 (MQ=255)
ctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCa > 2:2827148/1‑93 (MQ=255)
ctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCa < 1:1501821/93‑1 (MQ=255)
tATTTGCGGCAGATCAC‑AATAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAg > 2:4559122/1‑93 (MQ=255)
tATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAg < 2:1105081/93‑1 (MQ=255)
aTTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGt > 1:2171616/1‑93 (MQ=255)
tttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtc > 1:3673553/1‑93 (MQ=255)
tttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtc > 1:1438468/1‑93 (MQ=255)
ttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcc < 1:371315/93‑1 (MQ=255)
tGCGCCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcct < 1:3978777/93‑1 (MQ=255)
cGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctcc < 2:4595041/93‑1 (MQ=255)
ggCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcg > 2:1054007/1‑93 (MQ=255)
ggCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcg > 1:2079413/1‑93 (MQ=255)
gCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgc > 2:4255059/1‑93 (MQ=255)
gCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgc > 1:1966753/1‑93 (MQ=255)
gCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgc < 2:3515902/93‑1 (MQ=255)
aGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGt < 2:1674702/93‑1 (MQ=255)
aGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGt > 2:3116925/1‑93 (MQ=255)
gATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTACTCCGCGTg > 2:1319920/1‑93 (MQ=255)
|
ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA > NC_000913/3255786‑3255966
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGTA > NC_000913/3255794‑3255978
|
GACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGT > SRR4302535.1466578/1‑94 (MQ=60)
ACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTG < SRR4302535.4176682/94‑1 (MQ=60)
ACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTG < SRR4302535.4008466/94‑1 (MQ=60)
CTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGC < SRR4302535.1324176/94‑1 (MQ=60)
CTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGC < SRR4302535.2161338/94‑1 (MQ=60)
CTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGC < SRR4302535.2161339/94‑1 (MQ=60)
TTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCA > SRR4302535.1242776/1‑94 (MQ=60)
TGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACA > SRR4302535.733056/1‑94 (MQ=60)
TGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACA > SRR4302535.695230/1‑94 (MQ=60)
GAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAT < SRR4302535.1667049/94‑1 (MQ=60)
GAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAT < SRR4302535.2114745/94‑1 (MQ=60)
AAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATT < SRR4302535.2167004/94‑1 (MQ=60)
AATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTT < SRR4302535.3638988/94‑1 (MQ=60)
ATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTG < SRR4302535.2986005/94‑1 (MQ=60)
TAACGGAGATGAATAAGATTTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTTTATTGGCGGAAGATCA‑AAAAAAAAGGTGCACATTTGT < SRR4302535.95153/94‑1 (MQ=60)
AACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTG < SRR4302535.291104/94‑1 (MQ=60)
GGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAC > SRR4302535.2708948/1‑94 (MQ=60)
GGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAC > SRR4302535.4383332/1‑94 (MQ=60)
GAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACC > SRR4302535.1426879/1‑94 (MQ=60)
AGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCC > SRR4302535.2438705/1‑94 (MQ=60)
AGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCC > SRR4302535.2772978/1‑94 (MQ=60)
GATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCA > SRR4302535.2873457/1‑94 (MQ=60)
ATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAA > SRR4302535.4609339/1‑94 (MQ=60)
AGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAG < SRR4302535.3158402/94‑1 (MQ=60)
GGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGG < SRR4302535.3473116/94‑1 (MQ=60)
ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT > SRR4302535.2635154/1‑94 (MQ=60)
ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT < SRR4302535.2791307/94‑1 (MQ=60)
TAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATG < SRR4302535.747475/94‑1 (MQ=60)
AGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAA > SRR4302535.2005139/1‑94 (MQ=60)
AATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAG > SRR4302535.2091636/1‑94 (MQ=60)
TTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCT < SRR4302535.2270818/94‑1 (MQ=60)
TTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCT < SRR4302535.4018296/94‑1 (MQ=60)
TTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTG < SRR4302535.684434/94‑1 (MQ=60)
TTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGA > SRR4302535.4437140/1‑94 (MQ=60)
TCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAC < SRR4302535.1022356/94‑1 (MQ=60)
TCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAC < SRR4302535.2631119/94‑1 (MQ=60)
TCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAACGTGCACATTTGTGCACCCAAGGATGAAAGCTGAC > SRR4302535.4647853/1‑94 (MQ=60)
CTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACA < SRR4302535.3758827/94‑1 (MQ=60)
CTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACA > SRR4302535.3336514/1‑94 (MQ=60)
TACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAG < SRR4302535.3904589/94‑1 (MQ=60)
TACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAG > SRR4302535.4511622/1‑94 (MQ=60)
ACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGC < SRR4302535.4427813/94‑1 (MQ=60)
CTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCA > SRR4302535.223127/1‑94 (MQ=60)
CTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCA > SRR4302535.1478072/1‑94 (MQ=60)
CTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCA > SRR4302535.852077/1‑94 (MQ=60)
TAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAA > SRR4302535.3730495/1‑94 (MQ=60)
TAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAA < SRR4302535.1861225/94‑1 (MQ=60)
TAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAA > SRR4302535.1057570/1‑94 (MQ=60)
AAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAAT < SRR4302535.2045470/94‑1 (MQ=60)
AAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAAT < SRR4302535.1118335/94‑1 (MQ=60)
ATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCCGATC‑CCAACAAAAGGTGCACATTTGTGCACCCAGGGATGAAAGCTGGCAGCAACGT > SRR4302535.2190701/1‑94 (MQ=60)
ATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGT > SRR4302535.2190700/1‑94 (MQ=60)
ATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGT > SRR4302535.2304280/1‑94 (MQ=60)
TAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGTTGACAGCAATGTCA < SRR4302535.2402014/94‑1 (MQ=60)
CGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCG > SRR4302535.1148942/1‑94 (MQ=60)
CAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCA > SRR4302535.2692026/1‑94 (MQ=60)
CAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCA < SRR4302535.2454829/94‑1 (MQ=60)
AGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCAGATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAG > SRR4302535.1504305/1‑94 (MQ=60)
AGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCCGCCGCAG > SRR4302535.3616473/1‑94 (MQ=60)
AGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAG > SRR4302535.4698412/1‑94 (MQ=60)
AGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAG < SRR4302535.2448719/94‑1 (MQ=60)
AGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACC > SRR4302535.3293938/1‑94 (MQ=60)
AATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAC > SRR4302535.4337436/1‑94 (MQ=60)
AATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAC > SRR4302535.4263327/1‑94 (MQ=60)
TATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTT > SRR4302535.1617528/1‑94 (MQ=60)
ATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTT > SRR4302535.3100164/1‑94 (MQ=60)
TCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAA < SRR4302535.1566621/94‑1 (MQ=60)
CATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAT > SRR4302535.1262569/1‑94 (MQ=60)
ATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATG < SRR4302535.1605357/94‑1 (MQ=60)
ATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATG > SRR4302535.2776344/1‑94 (MQ=60)
TTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGG > SRR4302535.1896641/1‑94 (MQ=60)
TTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGG > SRR4302535.3778989/1‑94 (MQ=60)
TTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGG > SRR4302535.2448454/1‑94 (MQ=60)
TTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGG > SRR4302535.3300816/1‑94 (MQ=60)
TCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGC < SRR4302535.2297920/94‑1 (MQ=60)
TCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGACGCAGACCACTTTAATGGC > SRR4302535.4177857/1‑94 (MQ=60)
CTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCC < SRR4302535.3556498/94‑1 (MQ=60)
CTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCC > SRR4302535.1197360/1‑94 (MQ=60)
CTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAG < SRR4302535.1512626/94‑1 (MQ=60)
CTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAA > SRR4302535.4409960/1‑94 (MQ=60)
TATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGT > SRR4302535.2187159/1‑94 (MQ=60)
ATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTC > SRR4302535.3698989/1‑94 (MQ=60)
ATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTC > SRR4302535.1448750/1‑94 (MQ=60)
TTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCT < SRR4302535.1501604/94‑1 (MQ=60)
TTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCT < SRR4302535.373886/94‑1 (MQ=60)
TTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCT > SRR4302535.2337175/1‑94 (MQ=60)
TGCGCCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTC < SRR4302535.4005966/94‑1 (MQ=60)
CGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCG > SRR4302535.2094392/1‑94 (MQ=60)
GGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGC > SRR4302535.1980929/1‑94 (MQ=60)
GATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA > SRR4302535.4596319/1‑94 (MQ=60)
GATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA > SRR4302535.4692453/1‑94 (MQ=60)
CAAAAAAAGGTGCACACTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGAcgggt > SRR4302535.4716968/1‑89 (MQ=60)
AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCAGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTC > SRR4302535.4292737/1‑94 (MQ=60)
AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG < SRR4302535.1435009/94‑1 (MQ=60)
AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG > SRR4302535.438117/1‑94 (MQ=60)
AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG > SRR4302535.2340625/1‑94 (MQ=60)
AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG < SRR4302535.1493467/94‑1 (MQ=60)
AAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGC > SRR4302535.638294/1‑94 (MQ=60)
AAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCG > SRR4302535.4305011/1‑94 (MQ=60)
AAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCG > SRR4302535.2874268/1‑94 (MQ=60)
AAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCG > SRR4302535.1816976/1‑94 (MQ=60)
AAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGG > SRR4302535.309367/1‑94 (MQ=60)
AGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGTA < SRR4302535.4488571/94‑1 (MQ=60)
|
GACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGTA > NC_000913/3255794‑3255978
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
