Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,255,885	(A)_8→7	intergenic (‑288/+43)	yhaO ← / ← yhaP	putative transport system permease protein/putative L‑serine dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,255,878	0	A	.	99.7%	1391.1 / ‑2.8	305	intergenic (‑281/+50)	yhaO/yhaP	putative transport system permease protein/putative L‑serine dehydratase
Reads supporting (aligned to +/- strand): ref base A (1/0); new base . (159/145); total (160/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.47e-01

Only 100 of 343 total aligned reads displayed.

ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA  >  NC_000913/3255786‑3255966

  aaTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaa                                                                                        >  2:4186326/1‑93 (MQ=255)

   aTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaa                                                                                       >  1:4703931/1‑93 (MQ=255)

    tCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaa                                                                                      <  2:5306593/93‑1 (MQ=255)

    tCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaa                                                                                      <  1:2959583/93‑1 (MQ=255)

     cAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaa                                                                                     >  2:2502628/1‑93 (MQ=255)

       aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag                                                                                   <  2:6013355/93‑2 (MQ=255)

        gACTTTGAAATAACGGCGATAGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaagg                                                                                  <  1:7034849/93‑3 (MQ=255)

         aCTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggt                                                                                 >  1:5751701/1‑90 (MQ=255)

          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                <  1:4073826/93‑5 (MQ=255)

          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                >  2:3463298/1‑89 (MQ=255)

           tttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGc                                                                              <  2:2407117/93‑1 (MQ=255)

           tttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGc                                                                              <  2:1467934/93‑1 (MQ=255)

           tttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAAGAGAATATTCATTCTCTATTTGCTGCAGATCAC‑AAAAAAAGGTGc                                                                              >  2:4415123/1‑93 (MQ=255)

            ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGca                                                                             >  1:2414986/1‑93 (MQ=255)

            ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGca                                                                             <  2:4710997/93‑1 (MQ=255)

            ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGca                                                                             <  1:1970475/93‑1 (MQ=255)

              gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGcaca                                                                           <  2:3641875/93‑1 (MQ=255)

              gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGcaca                                                                           <  1:5014914/93‑1 (MQ=255)

               aaaTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAt                                                                          <  2:2978727/93‑1 (MQ=255)

                aagaaCGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAtt                                                                         <  1:5392693/90‑1 (MQ=255)

                aaTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAtt                                                                         <  1:1599018/93‑1 (MQ=255)

                  tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtg                                                                       >  1:6306982/1‑93 (MQ=255)

                  tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtg                                                                       <  2:6858805/93‑1 (MQ=255)

                  tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtg                                                                       <  1:4606635/93‑1 (MQ=255)

                    aCGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtgtg                                                                     <  1:6986332/93‑1 (MQ=255)

                       gagaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAc                                                                  >  1:7726996/1‑93 (MQ=255)

                        agaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAcc                                                                 <  2:927947/93‑1 (MQ=255)

                        agaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAcc                                                                 >  1:3302579/1‑93 (MQ=255)

                         gaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAccc                                                                >  2:6510854/1‑93 (MQ=255)

                         gaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAccc                                                                >  2:7228475/1‑93 (MQ=255)

                           tGGATAAGATTTTTCTAATAAATTAATCGCAGGAGAATATTCTTTCTCTATTGGCGGCAGACCAC‑AAAAAAAGGTGCACTTTTGTGCCCCCaa                                                              <  2:5663613/93‑1 (MQ=255)

                           tGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCaa                                                              >  2:54886/1‑93 (MQ=255)

                             gATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAgg                                                            >  2:1343040/1‑93 (MQ=255)

                               tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAt                                                          >  1:3376673/1‑93 (MQ=255)

                               tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAt                                                          <  2:2473503/93‑1 (MQ=255)

                                aaGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATg                                                         >  1:428002/1‑93 (MQ=255)

                                aaGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATg                                                         <  2:7727182/93‑1 (MQ=255)

                                 aGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGa                                                        >  1:1170697/1‑93 (MQ=255)

                                 aGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGa                                                        <  1:2795662/93‑1 (MQ=255)

                                   aaTTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGaaa                                                      >  2:6647514/1‑93 (MQ=255)

                                   aaTTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGaaa                                                      <  1:3424729/93‑1 (MQ=255)

                                     ttttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGc                                                    >  1:1790467/1‑93 (MQ=255)

                                      tttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCt                                                   >  1:6801614/1‑93 (MQ=255)

                                      tttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCt                                                   >  1:984640/1‑93 (MQ=255)

                                       ttatactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTg                                                  <  2:4539018/90‑1 (MQ=255)

                                         ctactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAACAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAc                                                <  2:7041198/93‑1 (MQ=255)

                                          tactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACa                                               <  1:4246632/93‑1 (MQ=255)

                                          tactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACa                                               <  1:1696040/93‑1 (MQ=255)

                                           actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg                                              <  2:1145052/93‑1 (MQ=255)

                                            ctaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGc                                             <  1:1381754/93‑1 (MQ=255)

                                                aTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATg                                         >  2:5207137/1‑93 (MQ=255)

                                                aTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATg                                         >  1:4474471/1‑93 (MQ=255)

                                                aTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATg                                         >  1:7328526/1‑93 (MQ=255)

                                                  tAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTc                                       >  2:6379553/1‑93 (MQ=255)

                                                   aaTCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCa                                      <  1:7532401/93‑1 (MQ=255)

                                                     tCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGGTGAAAGCTGACAGCAATGTCAGc                                    >  2:4281139/1‑93 (MQ=255)

                                                     tCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGc                                    <  2:416817/93‑1 (MQ=255)

                                                     tCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGc                                    <  1:4827350/93‑1 (MQ=255)

                                                      cGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGcc                                   >  1:6161816/1‑93 (MQ=255)

                                                      cGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGcc                                   >  1:6920089/1‑93 (MQ=255)

                                                        cAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGc                                 >  2:2612118/1‑93 (MQ=255)

                                                         aGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa                                <  2:4594224/93‑1 (MQ=255)

                                                         aGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa                                >  2:3091844/1‑93 (MQ=255)

                                                         aGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa                                <  2:2064240/93‑1 (MQ=255)

                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               >  1:7241733/1‑93 (MQ=255)

                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               >  2:1727128/1‑93 (MQ=255)

                                                           gagaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGa                              >  2:3544553/1‑93 (MQ=255)

                                                            agaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAc                             >  1:7128316/1‑93 (MQ=255)

                                                            agaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAc                             >  1:2600975/1‑93 (MQ=255)

                                                               attttcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGCGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc                          >  2:1898920/4‑93 (MQ=255)

                                                               atatTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc                          <  2:759135/93‑1 (MQ=255)

                                                                 attcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        <  2:379229/93‑1 (MQ=255)

                                                                 attcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        >  2:3869159/1‑93 (MQ=255)

                                                                 attcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        >  1:3817741/1‑93 (MQ=255)

                                                                 attcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACtt                        >  2:7396558/1‑93 (MQ=255)

                                                                  ttcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt                       >  1:3998082/1‑93 (MQ=255)

                                                                  ttcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt                       >  1:5248560/1‑93 (MQ=255)

                                                                  ttcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt                       >  1:2198383/1‑93 (MQ=255)

                                                                     attcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt                    <  2:7475914/93‑1 (MQ=255)

                                                                      ttcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATg                   >  1:7876702/1‑93 (MQ=255)

                                                                      ttcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATg                   <  1:5543171/93‑1 (MQ=255)

                                                                      ttcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATg                   <  1:2733306/93‑1 (MQ=255)

                                                                        ctctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGc                 >  2:2718012/1‑93 (MQ=255)

                                                                        ctctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGc                 >  1:778052/1‑93 (MQ=255)

                                                                         tctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCCAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGcc                >  2:4669183/1‑93 (MQ=255)

                                                                         tctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGcc                >  2:6906451/1‑93 (MQ=255)

                                                                          ctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCa               <  1:6431361/93‑1 (MQ=255)

                                                                            aTTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGt             <  1:5986797/93‑1 (MQ=255)

                                                                              ttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcc           <  2:800232/93‑1 (MQ=255)

                                                                              ttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcc           <  2:3989741/93‑1 (MQ=255)

                                                                                gCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctc         >  1:5891077/1‑93 (MQ=255)

                                                                                gCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctc         <  1:5036731/93‑1 (MQ=255)

                                                                                 cGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctcc        <  2:1504137/93‑1 (MQ=255)

                                                                                  ggCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcg       >  1:3001209/1‑93 (MQ=255)

                                                                                     aGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgcgg    >  1:2262538/1‑92 (MQ=255)

                                                                                     aGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGt    <  1:5126351/93‑1 (MQ=255)

                                                                                      gATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTg   >  1:7479263/1‑93 (MQ=255)

                                                                                      gATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTg   >  2:3911850/1‑93 (MQ=255)

                                                                                      gATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTg   >  2:4852168/1‑93 (MQ=255)

                                                                                       aTCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGa  <  1:7907494/93‑1 (MQ=255)

ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA  >  NC_000913/3255786‑3255966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGTA  >  NC_000913/3255793‑3255978

AGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGG                                                                                              >  SRR4302543.6174404/1‑94 (MQ=60)

AGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAGG                                                                                              <  SRR4302543.5587847/94‑1 (MQ=60)

 GACTTTGAAATAACGGCGATAGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGT                                                                                            <  SRR4302543.7102567/94‑1 (MQ=60)

 GACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGT                                                                                            <  SRR4302543.3075332/94‑1 (MQ=60)

 GACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGT                                                                                            >  SRR4302543.5804124/1‑94 (MQ=60)

   CTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGC                                                                                          <  SRR4302543.4110327/94‑1 (MQ=60)

   CTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGC                                                                                          >  SRR4302543.987308/1‑94 (MQ=60)

    TTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCA                                                                                         >  SRR4302543.2436809/1‑94 (MQ=60)

     TTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCAC                                                                                        <  SRR4302543.1988136/94‑1 (MQ=60)

       GAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAT                                                                                      <  SRR4302543.5060545/94‑1 (MQ=60)

       GAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAT                                                                                      <  SRR4302543.4992937/94‑1 (MQ=60)

         ACTAACGGAGATGGATAAGAATGTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTT                                                                                    <  SRR4302543.5441720/94‑1 (MQ=60)

         AATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTT                                                                                    <  SRR4302543.1613285/94‑1 (MQ=60)

         AAGAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTT                                                                                    <  SRR4302543.5441721/94‑1 (MQ=60)

          ATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTG                                                                                   >  SRR4302543.5786187/1‑94 (MQ=60)

          ATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTG                                                                                   <  SRR4302543.6264374/94‑1 (MQ=60)

          ATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTG                                                                                   >  SRR4302543.6366305/1‑94 (MQ=60)

          ATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTG                                                                                   >  SRR4302543.7795201/1‑94 (MQ=60)

           TAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGT                                                                                  <  SRR4302543.4648481/94‑1 (MQ=60)

            AACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTG                                                                                 >  SRR4302543.3015086/1‑94 (MQ=60)

             ACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGC                                                                                <  SRR4302543.7052084/94‑1 (MQ=60)

              CGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCA                                                                               >  SRR4302543.506763/1‑94 (MQ=60)

              CGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCA                                                                               <  SRR4302543.4260404/94‑1 (MQ=60)

              CGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCA                                                                               <  SRR4302543.1620243/94‑1 (MQ=60)

               GGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAC                                                                              <  SRR4302543.7916674/94‑1 (MQ=60)

               GGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAC                                                                              >  SRR4302543.7800038/1‑94 (MQ=60)

               GGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAC                                                                              <  SRR4302543.7001731/94‑1 (MQ=60)

               GGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAC                                                                              <  SRR4302543.1623847/94‑1 (MQ=60)

               GGAGATAGATAAGAATATTCTACTAAATTAATCGCAGAAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAC                                                                              <  SRR4302543.7062993/94‑1 (MQ=60)

                GAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACC                                                                             >  SRR4302543.3332380/1‑94 (MQ=60)

                 AGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCC                                                                            >  SRR4302543.4849710/1‑94 (MQ=60)

                  GATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCA                                                                           >  SRR4302543.7130296/1‑94 (MQ=60)

                   ATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAA                                                                          >  SRR4302543.2020259/1‑94 (MQ=60)

                   ATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAA                                                                          >  SRR4302543.4535760/1‑94 (MQ=60)

                     GGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGG                                                                        <  SRR4302543.4493540/94‑1 (MQ=60)

                     GGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGG                                                                        <  SRR4302543.3348879/94‑1 (MQ=60)

                     GGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGG                                                                        <  SRR4302543.5909844/94‑1 (MQ=60)

                      GATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGA                                                                       >  SRR4302543.3055470/1‑94 (MQ=60)

                      GATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGA                                                                       >  SRR4302543.1696310/1‑94 (MQ=60)

                       ATAAGAATTTTCTACTAAATTAATCGCAGGATAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT                                                                      <  SRR4302543.2668296/94‑1 (MQ=60)

                       ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTGATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT                                                                      >  SRR4302543.2768592/1‑94 (MQ=60)

                       ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT                                                                      <  SRR4302543.7622924/94‑1 (MQ=60)

                       ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT                                                                      <  SRR4302543.4834211/94‑1 (MQ=60)

                       ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT                                                                      >  SRR4302543.1545578/1‑94 (MQ=60)

                       ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT                                                                      >  SRR4302543.3406985/1‑94 (MQ=60)

                       ATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAT                                                                      <  SRR4302543.1247074/94‑1 (MQ=60)

                        TAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCCCCCAAGGATG                                                                     <  SRR4302543.2910478/94‑1 (MQ=60)

                        TAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATG                                                                     >  SRR4302543.432013/1‑94 (MQ=60)

                         AAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGA                                                                    >  SRR4302543.1181326/1‑94 (MQ=60)

                         AAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGA                                                                    <  SRR4302543.7131552/94‑1 (MQ=60)

                          AGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGTCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAA                                                                   <  SRR4302543.5899223/94‑1 (MQ=60)

                          AGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAA                                                                   <  SRR4302543.2821211/94‑1 (MQ=60)

                          AGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAA                                                                   <  SRR4302543.2821210/94‑1 (MQ=60)

                           GAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAA                                                                  <  SRR4302543.4299705/94‑1 (MQ=60)

                            AATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAG                                                                 <  SRR4302543.1972430/94‑1 (MQ=60)

                            AATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAG                                                                 <  SRR4302543.3455377/94‑1 (MQ=60)

                             ATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGC                                                                <  SRR4302543.5069778/94‑1 (MQ=60)

                             ATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGC                                                                >  SRR4302543.6001276/1‑94 (MQ=60)

                             ATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGC                                                                >  SRR4302543.1806491/1‑94 (MQ=60)

                              TTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCT                                                               >  SRR4302543.6865837/1‑94 (MQ=60)

                              TTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCT                                                               >  SRR4302543.993335/1‑94 (MQ=60)

                                TTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGA                                                             <  SRR4302543.3407599/94‑1 (MQ=60)

                                TTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGA                                                             >  SRR4302543.6991969/1‑94 (MQ=60)

                                 TCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAC                                                            <  SRR4302543.4237338/94‑1 (MQ=60)

                                 TCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAC                                                            <  SRR4302543.6296309/94‑1 (MQ=60)

                                  CTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACA                                                           <  SRR4302543.5971707/94‑1 (MQ=60)

                                  CTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACA                                                           >  SRR4302543.270359/1‑94 (MQ=60)

                                   TACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAG                                                          <  SRR4302543.1711251/94‑1 (MQ=60)

                                   TACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAG                                                          <  SRR4302543.4285167/94‑1 (MQ=60)

                                   TACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAG                                                          <  SRR4302543.4285166/94‑1 (MQ=60)

                                   TACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAG                                                          <  SRR4302543.7851924/94‑1 (MQ=60)

                                    ACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGC                                                         >  SRR4302543.7583194/1‑94 (MQ=60)

                                     CTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCA                                                        <  SRR4302543.1394180/94‑1 (MQ=60)

                                     CTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCA                                                        >  SRR4302543.3252493/1‑94 (MQ=60)

                                       AAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAAT                                                      <  SRR4302543.6888243/94‑1 (MQ=60)

                                       AAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAAT                                                      <  SRR4302543.3720932/94‑1 (MQ=60)

                                       AAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAAT                                                      <  SRR4302543.270344/94‑1 (MQ=60)

                                       AAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAAT                                                      <  SRR4302543.4897951/94‑1 (MQ=60)

                                       AAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAAT                                                      >  SRR4302543.4718280/1‑94 (MQ=60)

                                        AATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATG                                                     >  SRR4302543.4515079/1‑94 (MQ=60)

                                        AATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATG                                                     <  SRR4302543.7475477/94‑1 (MQ=60)

                                        AATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATG                                                     >  SRR4302543.7399068/1‑94 (MQ=60)

                                        AATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATG                                                     >  SRR4302543.7399069/1‑94 (MQ=60)

                                         ATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGT                                                    <  SRR4302543.5242476/94‑1 (MQ=60)

                                         ATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGT                                                    <  SRR4302543.177891/94‑1 (MQ=60)

                                         ATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGT                                                    >  SRR4302543.4486805/1‑94 (MQ=60)

                                           TAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCA                                                  >  SRR4302543.5740548/1‑94 (MQ=60)

                                            AATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAG                                                 <  SRR4302543.4289055/94‑1 (MQ=60)

                                            AATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAG                                                 >  SRR4302543.7173051/1‑94 (MQ=60)

                                            AATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAG                                                 <  SRR4302543.7604231/94‑1 (MQ=60)

                                             ATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGC                                                <  SRR4302543.6088230/94‑1 (MQ=60)

                                             ATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGC                                                <  SRR4302543.5156051/94‑1 (MQ=60)

                                              TCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCC                                               >  SRR4302543.1235703/1‑94 (MQ=60)

                                              TCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCC                                               >  SRR4302543.6985153/1‑94 (MQ=60)

                                              TCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCC                                               <  SRR4302543.7540244/94‑1 (MQ=60)

                                              TCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCC                                               >  SRR4302543.6220132/1‑94 (MQ=60)

                                              TCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCC                                               <  SRR4302543.4871400/94‑1 (MQ=60)

                                              TCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCC                                               <  SRR4302543.4871401/94‑1 (MQ=60)

                                               CGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCG                                              >  SRR4302543.6475344/1‑94 (MQ=60)

                                               CGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCG                                              >  SRR4302543.3590266/1‑94 (MQ=60)

                                               CGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCG                                              >  SRR4302543.7886103/1‑94 (MQ=60)

                                               CGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCG                                              >  SRR4302543.7224342/1‑94 (MQ=60)

                                                GCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGA                                             >  SRR4302543.2613344/1‑94 (MQ=60)

                                                 CAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCA                                            <  SRR4302543.2893152/94‑1 (MQ=60)

                                                 CAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCA                                            <  SRR4302543.7867125/94‑1 (MQ=60)

                                                  AGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATTAAAGCTGACAGCAATGTCAGCCGCAA                                           >  SRR4302543.7978738/1‑94 (MQ=60)

                                                  AGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAG                                           >  SRR4302543.7311821/1‑94 (MQ=60)

                                                  AGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAG                                           >  SRR4302543.227337/1‑94 (MQ=60)

                                                    GAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGTAAGCTGACAGCAATGTCAGCCGCAGAC                                         >  SRR4302543.7197586/1‑94 (MQ=60)

                                                    GAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAC                                         >  SRR4302543.7197585/1‑94 (MQ=60)

                                                    GAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAC                                         >  SRR4302543.2624597/1‑94 (MQ=60)

                                                        ATGTTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAACCTGACGACAATGTCAGCCGCACACCACT                                     >  SRR4302543.2419777/1‑94 (MQ=60)

                                                        ATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACT                                     >  SRR4302543.3389433/1‑94 (MQ=60)

                                                        ATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACT                                     >  SRR4302543.4740024/1‑94 (MQ=60)

                                                        ATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACT                                     >  SRR4302543.7674972/1‑94 (MQ=60)

                                                        ATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACT                                     <  SRR4302543.3453596/94‑1 (MQ=60)

                                                         TATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTT                                    >  SRR4302543.5565310/1‑94 (MQ=60)

                                                         TATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTT                                    <  SRR4302543.2148812/94‑1 (MQ=60)

                                                         TATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTT                                    >  SRR4302543.3851402/1‑94 (MQ=60)

                                                          ATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGCCAGCAATGTCAGCCGCAGACCACTTA                                   >  SRR4302543.4033723/1‑94 (MQ=60)

                                                          ATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTT                                   >  SRR4302543.5295873/1‑94 (MQ=60)

                                                          ATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTT                                   >  SRR4302543.6920195/1‑94 (MQ=60)

                                                          ATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTT                                   >  SRR4302543.4033722/1‑94 (MQ=60)

                                                          ATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTT                                   >  SRR4302543.2218152/1‑94 (MQ=60)

                                                           TTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTA                                  >  SRR4302543.5124095/1‑94 (MQ=60)

                                                             CATTCTCTATTTGCGGCAGATCACAAAAAAAAGGCGCACCTTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAA                                 >  SRR4302543.3412160/1‑94 (MQ=60)

                                                             CATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAT                                <  SRR4302543.5199658/94‑1 (MQ=60)

                                                             CATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAT                                <  SRR4302543.4588620/94‑1 (MQ=60)

                                                             CATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAT                                <  SRR4302543.3017132/94‑1 (MQ=60)

                                                              ATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATG                               >  SRR4302543.7548924/1‑94 (MQ=60)

                                                              ATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATG                               >  SRR4302543.2400641/1‑94 (MQ=60)

                                                              ATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATG                               >  SRR4302543.7950845/1‑94 (MQ=60)

                                                               TTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGG                              <  SRR4302543.5593569/94‑1 (MQ=60)

                                                               TTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGG                              <  SRR4302543.2758179/94‑1 (MQ=60)

                                                                TCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGC                             <  SRR4302543.6993681/94‑1 (MQ=60)

                                                                TCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGC                             >  SRR4302543.784889/1‑94 (MQ=60)

                                                                TCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGC                             >  SRR4302543.784890/1‑94 (MQ=60)

                                                                 CTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCC                            >  SRR4302543.402537/1‑94 (MQ=60)

                                                                   CTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAG                          <  SRR4302543.5578824/94‑1 (MQ=60)

                                                                   CTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAG                          <  SRR4302543.6491959/94‑1 (MQ=60)

                                                                   CTATTTCCGGCAGATCACAAAAAAAAGGTGCACATTTGTGGACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAGTGGCCA                           >  SRR4302543.5156602/1‑94 (MQ=60)

                                                                    TATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGT                         >  SRR4302543.897842/1‑94 (MQ=60)

                                                                     ATTTGCGGCAGATCAC‑ACAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTC                        <  SRR4302543.7084093/94‑1 (MQ=60)

                                                                     ATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTC                        >  SRR4302543.3885742/1‑94 (MQ=60)

                                                                     ATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTC                        >  SRR4302543.1759360/1‑94 (MQ=60)

                                                                     ATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTC                        <  SRR4302543.6041658/94‑1 (MQ=60)

                                                                     ATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTC                        <  SRR4302543.6041657/94‑1 (MQ=60)

                                                                      TTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCATCCGCAGACCACTTTAATGGCCAGTCC                       >  SRR4302543.1847491/1‑94 (MQ=60)

                                                                      TTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCC                       >  SRR4302543.1847493/1‑94 (MQ=60)

                                                                       TTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGACAGCTGACAGCAATGTCAGCCGCAGCCCACTTTAATGGCCAGTCCT                      >  SRR4302543.2264259/1‑94 (MQ=60)

                                                                       TTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCT                      <  SRR4302543.4100391/94‑1 (MQ=60)

                                                                       TTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCT                      <  SRR4302543.4100389/94‑1 (MQ=60)

                                                                       TTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCT                      <  SRR4302543.2787653/94‑1 (MQ=60)

                                                                        TGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTC                     >  SRR4302543.5944785/1‑94 (MQ=60)

                                                                         GCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCC                    <  SRR4302543.2589097/94‑1 (MQ=60)

                                                                         GCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCC                    >  SRR4302543.357409/1‑94 (MQ=60)

                                                                         GCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCC                    <  SRR4302543.5082543/94‑1 (MQ=60)

                                                                          CGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCATCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCG                   <  SRR4302543.1494156/94‑1 (MQ=60)

                                                                          CGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCG                   >  SRR4302543.3028417/1‑94 (MQ=60)

                                                                           GGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGC                  <  SRR4302543.6854097/94‑1 (MQ=60)

                                                                           GGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGC                  <  SRR4302543.658060/94‑1 (MQ=60)

                                                                           GGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGC                  <  SRR4302543.6854099/94‑1 (MQ=60)

                                                                             CAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGG                >  SRR4302543.2283179/1‑94 (MQ=60)

                                                                              AGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTG               >  SRR4302543.7550862/1‑94 (MQ=60)

                                                                              AGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTG               <  SRR4302543.5172692/94‑1 (MQ=60)

                                                                               GATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA              >  SRR4302543.7979561/1‑94 (MQ=60)

                                                                               GATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA              >  SRR4302543.5324976/1‑94 (MQ=60)

                                                                                ATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGAT             >  SRR4302543.5446955/1‑94 (MQ=60)

                                                                                ATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGAT             >  SRR4302543.14571/1‑94 (MQ=60)

                                                                                ATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGAT             >  SRR4302543.5447378/1‑94 (MQ=60)

                                                                                ATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGAT             <  SRR4302543.7981797/94‑1 (MQ=60)

                                                                                 TCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATG            <  SRR4302543.5541085/94‑1 (MQ=60)

                                                                                  CAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGT           <  SRR4302543.4606768/94‑1 (MQ=60)

                                                                                    acAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTT          >  SRR4302543.4683644/3‑94 (MQ=60)

                                                                                    acAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTATAATGGCCAGTCCTCCGCGTGATGTT          >  SRR4302543.543284/3‑94 (MQ=60)

                                                                                     CAAAAAAAGGTGCACATTTGTGCGCCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTT         <  SRR4302543.100088/94‑1 (MQ=60)

                                                                                     CAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTT         >  SRR4302543.295510/1‑94 (MQ=60)

                                                                                     CAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTT         <  SRR4302543.3491157/94‑1 (MQ=60)

                                                                                     CAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTT         >  SRR4302543.4221548/1‑94 (MQ=60)

                                                                                     CAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTT         <  SRR4302543.6823847/94‑1 (MQ=60)

                                                                                      AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTC        >  SRR4302543.785224/1‑94 (MQ=60)

                                                                                      AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTC        >  SRR4302543.5978830/1‑94 (MQ=60)

                                                                                      AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTC        <  SRR4302543.6450061/94‑1 (MQ=60)

                                                                                       AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG       >  SRR4302543.4785456/1‑94 (MQ=60)

                                                                                       AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG       <  SRR4302543.4269626/94‑1 (MQ=60)

                                                                                       AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG       <  SRR4302543.4044797/94‑1 (MQ=60)

                                                                                       AAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCG       >  SRR4302543.4018757/1‑94 (MQ=60)

                                                                                         AAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCG     >  SRR4302543.4539570/1‑94 (MQ=60)

                                                                                          AAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGG    <  SRR4302543.4030260/94‑1 (MQ=60)

                                                                                           AAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGT   <  SRR4302543.527404/94‑1 (MQ=60)

                                                                                           AAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGT   <  SRR4302543.6346591/94‑1 (MQ=60)

                                                                                            AGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGTA  >  SRR4302543.4164490/1‑94 (MQ=60)

                                                                                            AGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGTA  >  SRR4302543.7053541/1‑94 (MQ=60)

                                                                                            AGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGGA  >  SRR4302543.7273564/1‑94 (MQ=60)

AGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGATGTTTCGCGGTA  >  NC_000913/3255793‑3255978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`