Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,284,393 |
A→G |
E161E (GAA→GAG) |
agaI → |
putative galactosamine‑6‑phosphate isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,284,393 | 0 | A | G | 100.0%
| 424.2
/ NA
| 135 | E161E (GAA→GAG) | agaI | putative galactosamine‑6‑phosphate isomerase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (81/54); total (81/54) |
Only 100 of 173 total aligned reads displayed.
CGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCC > NC_000913/3284303‑3284481
|
gAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCg > 2:2566500/1‑93 (MQ=255)
aaCGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCgg < 2:62049/93‑1 (MQ=255)
aaCGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCgg < 2:2249901/93‑1 (MQ=255)
aCGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCggg > 1:4120788/1‑93 (MQ=255)
gggTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGgag < 2:4478945/93‑1 (MQ=255)
gTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGaa < 2:1560556/93‑1 (MQ=255)
tAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGaaa > 2:3292548/1‑93 (MQ=255)
aCGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGc > 2:2188859/1‑93 (MQ=255)
aCGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGc > 2:4143939/1‑93 (MQ=255)
aCGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGc < 1:4646526/93‑1 (MQ=255)
cGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGcc > 2:3625646/1‑93 (MQ=255)
gAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCt > 2:566413/1‑93 (MQ=255)
aCCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGc > 1:3574010/1‑93 (MQ=255)
aCCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGc < 2:2648583/93‑1 (MQ=255)
aCCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGc > 1:3865439/1‑93 (MQ=255)
ccTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCa > 2:50790/1‑93 (MQ=255)
cTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATGGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCaa < 1:1336315/93‑1 (MQ=255)
tGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAAc > 2:4678399/1‑93 (MQ=255)
gATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAAcc > 1:1819982/1‑93 (MQ=255)
gATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAAcc > 2:1023571/1‑93 (MQ=255)
gATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAAcc > 1:342599/1‑93 (MQ=255)
gcgcgcAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAACCGGTCATCTTGGGCTGAAGGAGCCGGGAGAAAGCCTGCAACCGGcc < 2:3247324/93‑1 (MQ=255)
gcAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGcc > 1:2444157/1‑93 (MQ=255)
cAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCa < 2:3844177/93‑1 (MQ=255)
aaaGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCat < 1:4303578/93‑1 (MQ=255)
aaGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCata > 1:1531070/1‑93 (MQ=255)
aGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCatat > 2:2239937/1‑93 (MQ=255)
gTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTc > 2:2801906/1‑93 (MQ=255)
gTCTGGATTTATGCGTTCTCGGATTGGGAAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTc < 2:3737426/93‑1 (MQ=255)
tCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCa > 1:645711/1‑93 (MQ=255)
tGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAc > 1:4229076/1‑93 (MQ=255)
tGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAc < 1:1746644/93‑1 (MQ=255)
gATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACtt < 1:1288052/93‑1 (MQ=255)
gATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCAATATCAGTAAACtt > 2:936522/1‑93 (MQ=255)
aTTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTg > 1:1943544/1‑93 (MQ=255)
tttATGGGTTCTCGGATGGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGa < 2:1906258/93‑1 (MQ=255)
tttATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGa > 2:3545840/1‑93 (MQ=255)
tttATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGa > 1:1407600/1‑93 (MQ=255)
tatATGTGTTCTCGGTTTGGAGAAAAACGATCATTTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGa < 2:3705306/91‑1 (MQ=255)
ttATGCGTTCTCGGATTGGGAAAAACCGGTCATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGAt < 2:1436450/93‑1 (MQ=255)
ttATGCGTTCTCGGATGGGGGAAAACCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGAt < 1:1087359/93‑1 (MQ=255)
aTGCGTTCTCGGATTGGGAAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGc < 1:1891052/93‑1 (MQ=255)
tGCTTTCTGGGATGGGGAAAAAACGGTAATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGcc < 1:962484/93‑1 (MQ=255)
tGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACTGGCCTGCCATATCAGTCAACTTGATGcc > 1:323820/1‑93 (MQ=255)
tGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGcc > 2:2874448/1‑93 (MQ=255)
gtgTTCTAGGGTTGGGAAAAACGGGTCATTTTGGGCTGAAGGAGCCGGGAGAAAGCGTGCAACCGCCCTGCCATATCAGTCAACTTGATGCCa < 2:1966694/91‑1 (MQ=255)
gCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCa > 1:3282714/1‑93 (MQ=255)
gTTCTCGGATGGGGAAAAAACGGTCATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGa < 2:40526/93‑1 (MQ=255)
ttCTGGGATGGGGAAAAAACGGTCCTCTGGGCCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGaa < 2:2446723/93‑1 (MQ=255)
ttCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGaa > 2:2102812/1‑93 (MQ=255)
tctcGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAac > 1:1141420/1‑93 (MQ=255)
tctcGGATGGGGGAAAACCGGTCATCTGGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAac < 1:870429/93‑1 (MQ=255)
ctcGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAaca < 1:287916/93‑1 (MQ=255)
tcGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAacac > 1:195488/1‑93 (MQ=255)
tcGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAacac > 1:922017/1‑93 (MQ=255)
gagtGGGAAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGc < 2:3134904/90‑1 (MQ=255)
gATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGc > 2:1542065/1‑93 (MQ=255)
gATTGGAGAAAACCGGTCATCTTGGGCTAACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGc < 1:3187589/93‑1 (MQ=255)
gATGGGGGAAAAACGGTCATCTGGGGCGGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGc < 2:1753183/93‑1 (MQ=255)
aTTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCa > 1:4592857/1‑93 (MQ=255)
aTTGGCGAAAAACGGTCACCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCa < 1:2632072/93‑1 (MQ=255)
tgggggAAAAACGGTCATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCaa < 2:696954/91‑1 (MQ=255)
gggggAAAAACGGTCATCTTGGGCTGAACGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAAc < 1:516671/92‑1 (MQ=255)
gggaAAAAACGGTCATCTTGGGCTGAAGGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACa < 2:1652852/93‑1 (MQ=255)
gggAAAAACGGTCATCTTGGGCTGAACGAGGCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGACAGAACACAGCAACAt > 2:1490326/1‑93 (MQ=255)
gggAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCAAGAACACAGCAACAt > 2:1135724/1‑93 (MQ=255)
ggaaaaaaCGGTCATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCATCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACAt < 1:3043976/90‑1 (MQ=255)
aaaaaCGGTCATCTGGGGCGGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgag < 1:3550547/93‑1 (MQ=255)
aaaaaCGGTAATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCACCCGACCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgag < 1:4051102/93‑1 (MQ=255)
aaacCGGTCATCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgaga < 1:4546960/93‑1 (MQ=255)
aaaaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgaga > 1:2605320/1‑93 (MQ=255)
aaaaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgaga > 1:552527/1‑93 (MQ=255)
aaaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATgagag > 2:1022581/1‑92 (MQ=255)
aaCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATg > 2:3174769/1‑93 (MQ=255)
cGGTCATCTGGGGCGGAGCGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGtt < 1:1711214/93‑1 (MQ=255)
gTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaa > 1:3495753/1‑93 (MQ=255)
gTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaa > 2:2854690/1‑93 (MQ=255)
cATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaaaa < 2:2791279/93‑1 (MQ=255)
aTCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaaaaa < 1:1612548/93‑1 (MQ=255)
aTCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTaaaaa > 2:1703776/1‑93 (MQ=255)
tCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAAc > 2:1632663/1‑93 (MQ=255)
tCTGGGGCGGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAAc < 1:26924/93‑1 (MQ=255)
ctggggATGAACAAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAAcc < 1:614397/90‑1 (MQ=255)
ttGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcg > 2:541723/1‑93 (MQ=255)
ttGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcg > 1:1619714/1‑93 (MQ=255)
ggggCTGAACGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcgc < 2:1023148/92‑1 (MQ=255)
gggCGGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACcgcg < 2:3302523/93‑1 (MQ=255)
ggCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCgg < 1:4180711/93‑1 (MQ=255)
gCTGACCGACCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCggg < 1:1348001/93‑1 (MQ=255)
gCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCggg < 2:2482009/93‑1 (MQ=255)
cTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGt < 1:2971547/93‑1 (MQ=255)
cTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCgggc > 1:80860/1‑92 (MQ=255)
tGAAGGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTc < 1:696236/93‑1 (MQ=255)
gaaacgagcCGGGAGAAAGCCTGCACCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTc < 1:2922066/91‑1 (MQ=255)
gaacgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCg > 1:173476/1‑93 (MQ=255)
gaacgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCg > 1:4066403/1‑93 (MQ=255)
gaacgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCg > 2:1941663/1‑93 (MQ=255)
gaacgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCg > 1:2068025/1‑93 (MQ=255)
aacgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGc > 2:4241608/1‑93 (MQ=255)
acgagcCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGcc > 2:620426/1‑93 (MQ=255)
|
CGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCC > NC_000913/3284303‑3284481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCCCCG > NC_000913/3284300‑3284484
|
GTGCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAG < SRR4302535.1710519/94‑1 (MQ=60)
GTGCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAG > SRR4302535.2261668/1‑94 (MQ=60)
GCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCC < SRR4302535.1595564/94‑1 (MQ=60)
GCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCC < SRR4302535.3808228/94‑1 (MQ=60)
CGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCG < SRR4302535.3292676/94‑1 (MQ=60)
CGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCG > SRR4302535.735771/1‑94 (MQ=60)
AACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGG > SRR4302535.4148986/1‑94 (MQ=60)
CGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAG > SRR4302535.2906689/1‑94 (MQ=60)
GGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGA < SRR4302535.3596440/94‑1 (MQ=60)
GGTAACGAGCCTGATTGCGCGCAAATGCGTTCTGGATTTACGGGTTCGCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAA < SRR4302535.558631/94‑1 (MQ=60)
AACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGC > SRR4302535.653305/1‑94 (MQ=60)
ACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCC < SRR4302535.4678007/94‑1 (MQ=60)
AACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGC > SRR4302535.4159269/1‑94 (MQ=60)
AACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGC > SRR4302535.3598790/1‑94 (MQ=60)
AACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGC > SRR4302535.3892025/1‑94 (MQ=60)
ACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCA > SRR4302535.4095186/1‑94 (MQ=60)
CTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATGGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAAC < SRR4302535.1345849/94‑1 (MQ=60)
TGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACC > SRR4302535.1833131/1‑94 (MQ=60)
TGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACC > SRR4302535.344971/1‑94 (MQ=60)
CGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCC > SRR4302535.2461766/1‑94 (MQ=60)
CAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCAT < SRR4302535.2612481/94‑1 (MQ=60)
AAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATA > SRR4302535.4690455/1‑94 (MQ=60)
AAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATA > SRR4302535.1317786/1‑94 (MQ=60)
AAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATA > SRR4302535.1542100/1‑94 (MQ=60)
AAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATA > SRR4302535.1361839/1‑94 (MQ=60)
AAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATA < SRR4302535.4333023/94‑1 (MQ=60)
GCGTTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAG < SRR4302535.2180073/94‑1 (MQ=60)
cgttttgtATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGT < SRR4302535.932625/86‑1 (MQ=60)
GTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCA > SRR4302535.650217/1‑94 (MQ=60)
GTCTGAATTTATGCGTTCTCGGATTGGGAAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCA < SRR4302535.1844001/94‑1 (MQ=60)
TCTGGATTTATGCTTTCTCGGATTGGGGAAAATCAGTCATCTTGGCCTAAACGAGCCGGGAGAAAGCCTGAACCCGGCCTGCCATATCAGTCAA < SRR4302535.3453864/94‑1 (MQ=60)
TTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAC < SRR4302535.4618703/94‑1 (MQ=60)
CTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAC > SRR4302535.4258020/1‑94 (MQ=60)
CTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAC > SRR4302535.3014995/1‑94 (MQ=60)
CTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAC > SRR4302535.1543394/1‑94 (MQ=60)
CTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAAC > SRR4302535.1655339/1‑94 (MQ=60)
TGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACT < SRR4302535.1759279/94‑1 (MQ=60)
GATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTG < SRR4302535.1297230/94‑1 (MQ=60)
GATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTG > SRR4302535.1957541/1‑94 (MQ=60)
ATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGA > SRR4302535.1751829/1‑94 (MQ=60)
ATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGA > SRR4302535.1496743/1‑94 (MQ=60)
ATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGA > SRR4302535.1417658/1‑94 (MQ=60)
TTATGCGTTCTCGGATGGGGGAAAACCGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATG < SRR4302535.1095090/94‑1 (MQ=60)
ATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACTGGCCTGCCATATCAGTCAACTTGATGCC > SRR4302535.326056/1‑94 (MQ=60)
ATGCGTTCTCGGATTGGGAAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCC < SRR4302535.1904672/94‑1 (MQ=60)
TGCTTTCTGGGATGGGGAAAAAACGGTAATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCA < SRR4302535.969322/94‑1 (MQ=60)
TGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCA > SRR4302535.4229663/1‑94 (MQ=60)
TGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCA > SRR4302535.3305514/1‑94 (MQ=60)
TTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAAC > SRR4302535.1149556/1‑94 (MQ=60)
TCTCGGATGGGGGAAAACCGGTCATCTGGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACA < SRR4302535.876594/94‑1 (MQ=60)
CTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACAC > SRR4302535.928553/1‑94 (MQ=60)
CTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACAC > SRR4302535.196831/1‑94 (MQ=60)
CTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACAC < SRR4302535.289933/94‑1 (MQ=60)
CGCGGATGGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACAC < SRR4302535.1243997/94‑1 (MQ=60)
TGGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCACCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACA < SRR4302535.4548893/94‑1 (MQ=60)
TCGGATTGGAGAAAAAGGATCATTTGGGGCTGAACGAGCCGGGAGAAAGCTTGCACCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACA < SRR4302535.2851831/94‑1 (MQ=60)
GGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGTCAGAACACAGC > SRR4302535.1927993/1‑94 (MQ=60)
GGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGC > SRR4302535.2076890/1‑94 (MQ=60)
GATTGGGGAAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCA > SRR4302535.4624119/1‑94 (MQ=60)
GATTGGAGAAAACCGGTCATCTTGGGCTAACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCA < SRR4302535.3209634/94‑1 (MQ=60)
ATTGGCGAAAAACGGTCACCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAA < SRR4302535.2650934/94‑1 (MQ=60)
TGGGGAAAAACGGTCATCTTGGTCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACA < SRR4302535.987618/94‑1 (MQ=60)
GGGGGAAAAACGGTCATCTTGGGCTGAACGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACA < SRR4302535.520285/94‑1 (MQ=60)
GGAAAAAACGGTCATCTGGGGCTGAACGAGCCGGGAGAAAGCCTGCATCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATG < SRR4302535.3065299/94‑1 (MQ=60)
aaaaccgtcctTCTTGGCCTGAACGAGCCGGGAGAAACCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGA < SRR4302535.978235/83‑1 (MQ=60)
AAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGTTGCCAAAACACAGCAACATGAGA > SRR4302535.830343/1‑94 (MQ=60)
AAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGA > SRR4302535.3350309/1‑94 (MQ=60)
AAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGA > SRR4302535.2624020/1‑94 (MQ=60)
AAAAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGA > SRR4302535.556397/1‑94 (MQ=60)
AAAAACGGTCATCTGGGGCGGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGA < SRR4302535.3575186/94‑1 (MQ=60)
AAAAACGGTAATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCACCCGACCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGA < SRR4302535.4078837/94‑1 (MQ=60)
AAACCGGTCATCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGAT < SRR4302535.4578049/94‑1 (MQ=60)
aggcgccttgttgGGGCTGATCGAGCCGGGAGAAAGCCGGCACCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATG < SRR4302535.671810/81‑1 (MQ=60)
AAACGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCATAACACAGCAACATGAGATG > SRR4302535.839930/1‑94 (MQ=60)
ACGGTGATCTGGGGCTGAACGAGCCGGGAGAAACCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTT < SRR4302535.3635611/94‑1 (MQ=60)
CGGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTA > SRR4302535.4076378/1‑94 (MQ=60)
CGGTCATCTGGGGCGGAGCGAGCGGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTA < SRR4302535.1723583/94‑1 (MQ=60)
GGTCATCTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAA > SRR4302535.3520043/1‑94 (MQ=60)
ATCTTGGGCTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAAC < SRR4302535.1624170/94‑1 (MQ=60)
ATCGTGGGCTAAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAAC < SRR4302535.320314/94‑1 (MQ=60)
TCTGGGGCGGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACC < SRR4302535.27135/94‑1 (MQ=60)
CTTGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCG > SRR4302535.1631397/1‑94 (MQ=60)
TGGGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCG < SRR4302535.541226/94‑1 (MQ=60)
GGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGG < SRR4302535.4209324/94‑1 (MQ=60)
GGCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGG > SRR4302535.937939/1‑94 (MQ=60)
GCTGACCGACCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGT < SRR4302535.1357623/94‑1 (MQ=60)
GCTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGC > SRR4302535.81436/1‑94 (MQ=60)
CTGACCGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTC < SRR4302535.2992405/94‑1 (MQ=60)
CTGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTC > SRR4302535.1732445/1‑94 (MQ=60)
gaAACGAGCCGGGAGAAAGCCTGCACCCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCG < SRR4302535.2942677/92‑1 (MQ=60)
TGAAGGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCG < SRR4302535.701118/94‑1 (MQ=60)
TGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCG > SRR4302535.2082931/1‑94 (MQ=60)
TGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCG > SRR4302535.174674/1‑94 (MQ=60)
TGAACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCG > SRR4302535.4094229/1‑94 (MQ=60)
AACGAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCC > SRR4302535.591938/1‑94 (MQ=60)
GAGCCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCCCCG > SRR4302535.1496118/1‑94 (MQ=60)
|
GTGCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCCCCG > NC_000913/3284300‑3284484
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
