Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,286,677 A→G T75A (ACT→GCT)  yraJ → putative outer membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,286,6770AG99.4% 1047.2 / ‑5.3 331T75A (ACT→GCT) yraJputative outer membrane protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (152/177);  total (153/178)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 333 total aligned reads displayed.

TCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA  >  NC_000913/3286588‑3286766
                                                                                         |                                                                                         
 cGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTa                                                                                       >  1:4863504/1‑93 (MQ=255)
   aCCCCATAATGCTGTTACCCACAACCAGTAACATGCCAACAAACGAGCTGTAGCGCTGTCTGAAACAATATGCACAACTACCAGGAGCTCAtt                                                                                     >  2:3686318/1‑92 (MQ=255)
    ccccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCa                                                                                    >  1:764594/1‑93 (MQ=255)
    ccccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCa                                                                                    <  2:4206938/93‑1 (MQ=255)
     cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg                                                                                   <  1:6508663/93‑1 (MQ=255)
     cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg                                                                                   >  2:2222352/1‑93 (MQ=255)
     cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg                                                                                   >  1:5718488/1‑93 (MQ=255)
      ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAgg                                                                                  <  2:5971736/93‑1 (MQ=255)
      ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGAACAACTACCAGGAGCTTATCAgg                                                                                  >  1:1905659/1‑93 (MQ=255)
       cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 <  2:5797447/93‑1 (MQ=255)
       cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 <  2:5740172/93‑1 (MQ=255)
           aTGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGat                                                                             >  2:1509918/1‑93 (MQ=255)
            tGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTCCCAGGAGCTTATCAGGTTGata                                                                            <  1:3994039/93‑1 (MQ=255)
              cTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATc                                                                          >  2:4056013/1‑93 (MQ=255)
              cTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATc                                                                          <  2:5200900/93‑1 (MQ=255)
               tGGAAACCACAAAAAGTGGTATGCAAACAGCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt                                                                         <  1:497573/93‑1 (MQ=255)
               tGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt                                                                         >  2:6928981/1‑93 (MQ=255)
               tGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt                                                                         <  1:148994/93‑1 (MQ=255)
               tGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt                                                                         <  1:7280408/93‑1 (MQ=255)
                ggAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTg                                                                        <  1:5517935/93‑1 (MQ=255)
                ggAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTg                                                                        <  1:2514814/93‑1 (MQ=255)
                  aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc                                                                      <  2:5017168/93‑1 (MQ=255)
                    aCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTg                                                                    <  2:2692690/93‑1 (MQ=255)
                    aCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTg                                                                    >  2:776623/1‑93 (MQ=255)
                      cacaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGaa                                                                  <  2:1868207/93‑1 (MQ=255)
                      cacaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGaa                                                                  <  1:1121383/93‑1 (MQ=255)
                      cacaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGaa                                                                  <  2:3803424/93‑1 (MQ=255)
                       acaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt                                                                 <  1:444566/93‑1 (MQ=255)
                        caAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATa                                                                >  1:4845119/1‑93 (MQ=255)
                        caAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATa                                                                >  1:5686637/1‑93 (MQ=255)
                        aaaaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATa                                                                <  1:5567882/92‑1 (MQ=255)
                         aaaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaa                                                               >  2:6707776/1‑93 (MQ=255)
                         aaaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaa                                                               <  2:5287794/93‑1 (MQ=255)
                          aaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaa                                                              <  1:1052083/93‑1 (MQ=255)
                          aaaaGTGGTATGCAAACAACCGACCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaa                                                              <  2:5641108/93‑1 (MQ=255)
                           aaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaa                                                             <  1:1682856/93‑1 (MQ=255)
                            aaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaaa                                                            <  2:300155/93‑1 (MQ=255)
                             aGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaag                                                           <  1:646673/93‑1 (MQ=255)
                              gTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaaga                                                          <  1:5090403/93‑1 (MQ=255)
                                ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        >  1:2530581/1‑93 (MQ=255)
                                ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        <  2:3801294/93‑1 (MQ=255)
                                   aTGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGtt                                                     <  1:3072005/93‑1 (MQ=255)
                                   aTGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGtt                                                     <  1:3185139/93‑1 (MQ=255)
                                    tGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGttt                                                    >  1:3390819/1‑93 (MQ=255)
                                    tGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGttt                                                    <  1:1839057/93‑1 (MQ=255)
                                     gCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTCAATAAAAAGAAGGTTTc                                                   <  2:5465524/93‑1 (MQ=255)
                                      cAAACGACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTca                                                  <  1:4743550/93‑1 (MQ=255)
                                        aacaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcaca                                                >  2:1412951/1‑93 (MQ=255)
                                         acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAg                                               <  2:6577415/93‑1 (MQ=255)
                                         acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAg                                               <  1:4211946/93‑1 (MQ=255)
                                           aacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaa                                             >  1:6235172/1‑93 (MQ=255)
                                            acCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaa                                            <  1:6003382/93‑1 (MQ=255)
                                            acCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaa                                            >  1:1269597/1‑93 (MQ=255)
                                               gATCTGTTGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaa                                         >  1:2196805/1‑93 (MQ=255)
                                                 tCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAt                                       <  2:7396619/93‑1 (MQ=255)
                                                  cTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAtt                                      <  1:745724/93‑1 (MQ=255)
                                                   tGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTa                                     <  2:730776/93‑1 (MQ=255)
                                                    gTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTAc                                    <  1:4640727/93‑1 (MQ=255)
                                                     tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACa                                   <  2:3381069/93‑1 (MQ=255)
                                                      cgcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACaa                                  <  2:3197634/93‑2 (MQ=255)
                                                       gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt                                 <  2:5306068/93‑1 (MQ=255)
                                                       gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt                                 <  2:3888668/93‑1 (MQ=255)
                                                       gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt                                 <  2:4577238/93‑1 (MQ=255)
                                                       gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt                                 <  1:3750792/93‑1 (MQ=255)
                                                         gTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTa                               >  2:2763632/1‑93 (MQ=255)
                                                          tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc                              >  1:895688/1‑93 (MQ=255)
                                                          tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc                              >  1:4515965/1‑93 (MQ=255)
                                                          tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc                              <  1:6943447/93‑1 (MQ=255)
                                                           ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc                             <  1:1746704/93‑1 (MQ=255)
                                                             ttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGGATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAACGc                           >  2:4497229/1‑93 (MQ=255)
                                                                aaaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCaa                        <  1:2468495/93‑1 (MQ=255)
                                                                aaaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCaa                        >  1:7757270/1‑93 (MQ=255)
                                                                 aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       >  1:5181747/1‑93 (MQ=255)
                                                                 aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       <  1:5969424/93‑1 (MQ=255)
                                                                 aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       >  1:537325/1‑93 (MQ=255)
                                                                  aaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATg                      >  2:4668869/1‑93 (MQ=255)
                                                                    aaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGcg                    >  2:1668918/1‑92 (MQ=255)
                                                                    aaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCa                    <  2:3093345/93‑1 (MQ=255)
                                                                      atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  <  1:7227245/93‑1 (MQ=255)
                                                                      atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  <  2:2002263/93‑1 (MQ=255)
                                                                      atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  <  1:7097252/93‑1 (MQ=255)
                                                                      atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  <  2:6302305/93‑1 (MQ=255)
                                                                      atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  >  1:3540767/1‑93 (MQ=255)
                                                                       tatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCagag                 >  2:1269879/1‑93 (MQ=255)
                                                                           cacaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAAc             <  2:3513799/93‑1 (MQ=255)
                                                                            gcaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACt            <  1:6059524/92‑1 (MQ=255)
                                                                            acaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACt            >  1:6793905/1‑93 (MQ=255)
                                                                              aaCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTc          <  1:7907097/93‑1 (MQ=255)
                                                                                cTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTg        >  1:5004954/1‑93 (MQ=255)
                                                                                 tACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGc       >  1:2088871/1‑93 (MQ=255)
                                                                                 tACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAATACATTTACCGCCAATGCAGAGCAACTTCTGc       <  2:6235171/93‑1 (MQ=255)
                                                                                    cAGGAGCTTATCAGGTTGATATCTGGCTTAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc    <  1:7555328/93‑1 (MQ=255)
                                                                                    cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc    >  1:2703391/1‑93 (MQ=255)
                                                                                    cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGAAGc    >  1:1950889/1‑93 (MQ=255)
                                                                                     aGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGcc   >  1:1402282/1‑93 (MQ=255)
                                                                                     aGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGcc   >  2:7571567/1‑93 (MQ=255)
                                                                                     aGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGcc   <  1:389858/93‑1 (MQ=255)
                                                                                      ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  1:20549/1‑93 (MQ=255)
                                                                                      ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  2:3259553/1‑93 (MQ=255)
                                                                                      ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  2:7891677/1‑93 (MQ=255)
                                                                                         |                                                                                         
TCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA  >  NC_000913/3286588‑3286766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAG  >  NC_000913/3286584‑3286769
                                                                                             |                                                                                            
TATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAG                                                                                              <  SRR4302543.960162/94‑1 (MQ=60)
TATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAG                                                                                              <  SRR4302543.3372386/94‑1 (MQ=60)
TATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAG                                                                                              <  SRR4302543.2733328/94‑1 (MQ=60)
TATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAG                                                                                              >  SRR4302543.6821872/1‑94 (MQ=60)
TATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAG                                                                                              <  SRR4302543.7356562/94‑1 (MQ=60)
TATTGCGCCCCTATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAG                                                                                              <  SRR4302543.960161/94‑1 (MQ=60)
   TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTT                                                                                           >  SRR4302543.3869360/1‑94 (MQ=60)
    TCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTA                                                                                          >  SRR4302543.4907836/1‑94 (MQ=60)
    TCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTA                                                                                          >  SRR4302543.4907840/1‑94 (MQ=60)
     CGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTAT                                                                                         <  SRR4302543.4004807/94‑1 (MQ=60)
     CGACCCCACTATGCCGGAAACCACAAAAAGTGGTATGCAAACAACCGAGCCGTCGCGTTGGTCAAAAAAACATGCACAACTACCAGGAGCTTAC                                                                                         >  SRR4302543.6067268/1‑94 (MQ=60)
       ACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCA                                                                                       >  SRR4302543.771324/1‑94 (MQ=60)
       ACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCA                                                                                       <  SRR4302543.20721/94‑1 (MQ=60)
        CCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAG                                                                                      <  SRR4302543.7668599/94‑1 (MQ=60)
        CCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAG                                                                                      >  SRR4302543.2557880/1‑94 (MQ=60)
        CCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAG                                                                                      >  SRR4302543.5770665/1‑94 (MQ=60)
         CCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGG                                                                                     <  SRR4302543.6569971/94‑1 (MQ=60)
         CCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGG                                                                                     <  SRR4302543.7632345/94‑1 (MQ=60)
         CCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGG                                                                                     >  SRR4302543.1922822/1‑94 (MQ=60)
         CCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGAACAACTACCAGGAGCTTATCAGG                                                                                     >  SRR4302543.1922821/1‑94 (MQ=60)
         CCCATTATGCTGGAAACCACAAAAAGGGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGG                                                                                     <  SRR4302543.1454643/94‑1 (MQ=60)
          CCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGT                                                                                    >  SRR4302543.2342542/1‑94 (MQ=60)
           CATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTT                                                                                   <  SRR4302543.3142899/94‑1 (MQ=60)
           CATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTT                                                                                   <  SRR4302543.7079785/94‑1 (MQ=60)
           CATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTT                                                                                   <  SRR4302543.5320676/94‑1 (MQ=60)
           CATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTT                                                                                   <  SRR4302543.5628622/94‑1 (MQ=60)
            ATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTG                                                                                  <  SRR4302543.5034306/94‑1 (MQ=60)
            ATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTG                                                                                  >  SRR4302543.4575066/1‑94 (MQ=60)
            ATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTG                                                                                  <  SRR4302543.4843357/94‑1 (MQ=60)
              TATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGAT                                                                                <  SRR4302543.6039/94‑1 (MQ=60)
               ATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAACAATATGCACAACTACCAGGAGCTTATCAGGTTGATA                                                                               >  SRR4302543.6262364/1‑94 (MQ=60)
               ATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATA                                                                               <  SRR4302543.1866019/94‑1 (MQ=60)
               ATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATA                                                                               >  SRR4302543.2099729/1‑94 (MQ=60)
                TGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTCCCAGGAGCTTATCAGGTTGATAT                                                                              <  SRR4302543.4029601/94‑1 (MQ=60)
                TGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGCTGATAT                                                                              >  SRR4302543.3920740/1‑94 (MQ=60)
                  CTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCT                                                                            >  SRR4302543.2595365/1‑94 (MQ=60)
                  CTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCT                                                                            <  SRR4302543.4695816/94‑1 (MQ=60)
                   TGGAAACCACAAAAAGTGGTATGCAAACAGCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTG                                                                           <  SRR4302543.502171/94‑1 (MQ=60)
                   TGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTG                                                                           >  SRR4302543.6527635/1‑94 (MQ=60)
                   TGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTG                                                                           <  SRR4302543.7350721/94‑1 (MQ=60)
                   TGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTG                                                                           <  SRR4302543.150285/94‑1 (MQ=60)
                    GGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGG                                                                          >  SRR4302543.4313035/1‑94 (MQ=60)
                    GGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGG                                                                          <  SRR4302543.2537653/94‑1 (MQ=60)
                    GGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGG                                                                          <  SRR4302543.5568050/94‑1 (MQ=60)
                    GGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGG                                                                          <  SRR4302543.5568048/94‑1 (MQ=60)
                     GAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGC                                                                         >  SRR4302543.7293825/1‑94 (MQ=60)
                     GAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGC                                                                         <  SRR4302543.4838375/94‑1 (MQ=60)
                      AAACCACAAAAGGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCT                                                                        <  SRR4302543.7850381/94‑1 (MQ=60)
                      AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCT                                                                        <  SRR4302543.1593486/94‑1 (MQ=60)
                       AACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTG                                                                       <  SRR4302543.2014462/94‑1 (MQ=60)
                       AACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTG                                                                       >  SRR4302543.5745863/1‑94 (MQ=60)
                       AACCACAAAAAGGGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTG                                                                       >  SRR4302543.4445347/1‑94 (MQ=60)
                        ACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGA                                                                      >  SRR4302543.3936366/1‑94 (MQ=60)
                        ACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGA                                                                      >  SRR4302543.5116159/1‑94 (MQ=60)
                          CACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAT                                                                    <  SRR4302543.5665270/94‑1 (MQ=60)
                          CACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAT                                                                    <  SRR4302543.5207510/94‑1 (MQ=60)
                          CACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAT                                                                    <  SRR4302543.1131551/94‑1 (MQ=60)
                          CACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAT                                                                    <  SRR4302543.3552601/94‑1 (MQ=60)
                           ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAGATATGCACAACTCCCAGGAGCTTATCAGGTTGATATCTGGCTGAATA                                                                   <  SRR4302543.5762610/94‑1 (MQ=60)
                           ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA                                                                   <  SRR4302543.6186246/94‑1 (MQ=60)
                           ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA                                                                   <  SRR4302543.448729/94‑1 (MQ=60)
                           ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA                                                                   >  SRR4302543.4889294/1‑94 (MQ=60)
                           ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA                                                                   >  SRR4302543.5738535/1‑94 (MQ=60)
                            CAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAA                                                                  >  SRR4302543.7510886/1‑94 (MQ=60)
                            CAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAA                                                                  <  SRR4302543.4502528/94‑1 (MQ=60)
                            AAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAA                                                                  <  SRR4302543.5618540/94‑1 (MQ=60)
                              AAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAA                                                                >  SRR4302543.6845920/1‑94 (MQ=60)
                              AAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAA                                                                <  SRR4302543.1061504/94‑1 (MQ=60)
                               AAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAA                                                               >  SRR4302543.7723158/1‑94 (MQ=60)
                               AAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAA                                                               <  SRR4302543.1697957/94‑1 (MQ=60)
                               AAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAA                                                               <  SRR4302543.5015448/94‑1 (MQ=60)
                                AAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAG                                                              <  SRR4302543.6059933/94‑1 (MQ=60)
                                 AGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGA                                                             <  SRR4302543.7989730/94‑1 (MQ=60)
                                 AGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGA                                                             <  SRR4302543.652586/94‑1 (MQ=60)
                                  GTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAA                                                            >  SRR4302543.7597921/1‑94 (MQ=60)
                                  GTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAA                                                            <  SRR4302543.4089553/94‑1 (MQ=60)
                                  GTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAA                                                            <  SRR4302543.5136531/94‑1 (MQ=60)
                                   TGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAG                                                           >  SRR4302543.2553611/1‑94 (MQ=60)
                                   TGGTATGCAAACAACCGATCTGTCGCGTTTCTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAG                                                           <  SRR4302543.256366/94‑1 (MQ=60)
                                    GGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGG                                                          <  SRR4302543.6324526/94‑1 (MQ=60)
                                     GTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGT                                                         <  SRR4302543.5101441/94‑1 (MQ=60)
                                      TATGCAAACAGCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTT                                                        <  SRR4302543.5155374/94‑1 (MQ=60)
                                      TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTT                                                        <  SRR4302543.5554284/94‑1 (MQ=60)
                                      TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTT                                                        <  SRR4302543.4354672/94‑1 (MQ=60)
                                       ATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTT                                                       <  SRR4302543.3099634/94‑1 (MQ=60)
                                       ATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTT                                                       <  SRR4302543.3213863/94‑1 (MQ=60)
                                       ATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTT                                                       <  SRR4302543.3213865/94‑1 (MQ=60)
                                       ATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTT                                                       >  SRR4302543.7760426/1‑94 (MQ=60)
                                       ATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTT                                                       >  SRR4302543.3421223/1‑94 (MQ=60)
                                        TGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTC                                                      <  SRR4302543.1855599/94‑1 (MQ=60)
                                         GCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCA                                                     <  SRR4302543.1351142/94‑1 (MQ=60)
                                         GCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCA                                                     <  SRR4302543.134348/94‑1 (MQ=60)
                                         GCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCA                                                     <  SRR4302543.2544201/94‑1 (MQ=60)
                                          CAAACGACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCAC                                                    <  SRR4302543.4786897/94‑1 (MQ=60)
                                          CAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCAC                                                    <  SRR4302543.1734336/94‑1 (MQ=60)
                                          CAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCAC                                                    <  SRR4302543.1815140/94‑1 (MQ=60)
                                          CAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCAC                                                    >  SRR4302543.1448696/1‑94 (MQ=60)
                                          CAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCAC                                                    >  SRR4302543.4712863/1‑94 (MQ=60)
                                            AACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAG                                                  >  SRR4302543.6935613/1‑94 (MQ=60)
                                            AACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAG                                                  >  SRR4302543.5023619/1‑94 (MQ=60)
                                             ACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGA                                                 <  SRR4302543.4250139/94‑1 (MQ=60)
                                              CAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAA                                                >  SRR4302543.6294021/1‑94 (MQ=60)
                                              CAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAA                                                >  SRR4302543.4897517/1‑94 (MQ=60)
                                               AACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAA                                               >  SRR4302543.1280945/1‑94 (MQ=60)
                                                ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAA                                              <  SRR4302543.6058586/94‑1 (MQ=60)
                                                 CCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAA                                             <  SRR4302543.5817018/94‑1 (MQ=60)
                                                  CGATCTGTTGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAA                                            >  SRR4302543.2216553/1‑94 (MQ=60)
                                                  CGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAA                                            >  SRR4302543.4934948/1‑94 (MQ=60)
                                                     TCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATT                                         >  SRR4302543.5187591/1‑94 (MQ=60)
                                                     TCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATT                                         <  SRR4302543.7210606/94‑1 (MQ=60)
                                                     TCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATT                                         >  SRR4302543.2542138/1‑94 (MQ=60)
                                                     TCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATT                                         >  SRR4302543.7570064/1‑94 (MQ=60)
                                                     TCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATT                                         >  SRR4302543.3606459/1‑94 (MQ=60)
                                                     TCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATT                                         <  SRR4302543.2451348/94‑1 (MQ=60)
                                                      CTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTA                                        >  SRR4302543.455902/1‑94 (MQ=60)
                                                      CTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTA                                        >  SRR4302543.3810810/1‑94 (MQ=60)
                                                      CTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTA                                        <  SRR4302543.752358/94‑1 (MQ=60)
                                                        GTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA                                      >  SRR4302543.3358782/1‑94 (MQ=60)
                                                        GTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA                                      >  SRR4302543.531013/1‑94 (MQ=60)
                                                        GTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA                                      <  SRR4302543.4682936/94‑1 (MQ=60)
                                                        GTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA                                      >  SRR4302543.4029884/1‑94 (MQ=60)
                                                         TCGCGTTTTTCAAAAAAATATGCACAGCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAT                                     <  SRR4302543.212174/94‑1 (MQ=60)
                                                         TCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAT                                     <  SRR4302543.6615465/94‑1 (MQ=60)
                                                         TCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAT                                     <  SRR4302543.212175/94‑1 (MQ=60)
                                                          CGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATT                                    >  SRR4302543.2062658/1‑94 (MQ=60)
                                                           GCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTT                                   <  SRR4302543.3783792/94‑1 (MQ=60)
                                                           GCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTT                                   <  SRR4302543.5822544/94‑1 (MQ=60)
                                                           GCGTTTTTAAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTT                                   <  SRR4302543.4917065/94‑1 (MQ=60)
                                                            CGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTA                                  <  SRR4302543.5597063/94‑1 (MQ=60)
                                                            CGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTA                                  >  SRR4302543.1097329/1‑94 (MQ=60)
                                                             GTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAC                                 <  SRR4302543.835186/94‑1 (MQ=60)
                                                             GTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAC                                 <  SRR4302543.1271800/94‑1 (MQ=60)
                                                             GTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAC                                 >  SRR4302543.3588165/1‑94 (MQ=60)
                                                             GTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAC                                 >  SRR4302543.903598/1‑94 (MQ=60)
                                                             GTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAC                                 >  SRR4302543.5586290/1‑94 (MQ=60)
                                                             GTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAC                                 >  SRR4302543.290961/1‑94 (MQ=60)
                                                             GTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAC                                 >  SRR4302543.4557042/1‑94 (MQ=60)
                                                              TTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACC                                <  SRR4302543.7857936/94‑1 (MQ=60)
                                                              TTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACC                                <  SRR4302543.7008775/94‑1 (MQ=60)
                                                              TTTTT‑‑‑AAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCC                             >  SRR4302543.6538549/1‑94 (MQ=60)
                                                               TTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCG                               <  SRR4302543.1762302/94‑1 (MQ=60)
                                                                   CAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTAaattatcgcccaa                           >  SRR4302543.6991138/1‑81 (MQ=60)
                                                                   CAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAA                           >  SRR4302543.7830486/1‑94 (MQ=60)
                                                                    AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT                          >  SRR4302543.7224602/1‑94 (MQ=60)
                                                                    AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT                          <  SRR4302543.4487133/94‑1 (MQ=60)
                                                                    AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT                          <  SRR4302543.2818385/94‑1 (MQ=60)
                                                                    AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT                          >  SRR4302543.542305/1‑94 (MQ=60)
                                                                    AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT                          >  SRR4302543.5980851/1‑94 (MQ=60)
                                                                    AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT                          <  SRR4302543.2490774/94‑1 (MQ=60)
                                                                    AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT                          >  SRR4302543.5228509/1‑94 (MQ=60)
                                                                     AAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATG                         <  SRR4302543.1706014/94‑1 (MQ=60)
                                                                     AAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATG                         <  SRR4302543.6024085/94‑1 (MQ=60)
                                                                      AAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGC                        <  SRR4302543.715917/94‑1 (MQ=60)
                                                                       AAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCA                       <  SRR4302543.1099247/94‑1 (MQ=60)
                                                                       AAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCA                       <  SRR4302543.7307856/94‑1 (MQ=60)
                                                                        AAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAG                      <  SRR4302543.1903005/94‑1 (MQ=60)
                                                                         AATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGA                     >  SRR4302543.3572236/1‑94 (MQ=60)
                                                                         AATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGA                     >  SRR4302543.1796107/1‑94 (MQ=60)
                                                                          ATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAG                    <  SRR4302543.7297259/94‑1 (MQ=60)
                                                                          ATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAG                    <  SRR4302543.7166168/94‑1 (MQ=60)
                                                                            ATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCA                  <  SRR4302543.6600539/94‑1 (MQ=60)
                                                                            ATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCA                  <  SRR4302543.7324729/94‑1 (MQ=60)
                                                                            ATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCA                  <  SRR4302543.4730752/94‑1 (MQ=60)
                                                                               CACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACT               >  SRR4302543.6858060/1‑94 (MQ=60)
                                                                                GCAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTT              <  SRR4302543.6116888/94‑1 (MQ=60)
                                                                                 CAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTC             >  SRR4302543.7004786/1‑94 (MQ=60)
                                                                                  AACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCT            <  SRR4302543.7981396/94‑1 (MQ=60)
                                                                                  AACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCT            <  SRR4302543.1439236/94‑1 (MQ=60)
                                                                                  AACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCT            <  SRR4302543.243007/94‑1 (MQ=60)
                                                                                  AACTACCAGGAGCTTATCAGGTGGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCT            <  SRR4302543.5564922/94‑1 (MQ=60)
                                                                                   ACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTG           >  SRR4302543.3300182/1‑94 (MQ=60)
                                                                                   ACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTG           >  SRR4302543.5050509/1‑94 (MQ=60)
                                                                                    CTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGC          >  SRR4302543.158598/1‑94 (MQ=60)
                                                                                    CTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGC          >  SRR4302543.2107533/1‑94 (MQ=60)
                                                                                    CTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGC          >  SRR4302543.7892913/1‑94 (MQ=60)
                                                                                    CTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGC          >  SRR4302543.2107534/1‑94 (MQ=60)
                                                                                    CTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGATTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAAGTTCGGC          >  SRR4302543.1219498/1‑94 (MQ=60)
                                                                                    CTACCAGGAGCTTATCAGGTTCATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGC          >  SRR4302543.180279/1‑94 (MQ=60)
                                                                                     TACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCA         <  SRR4302543.3368029/94‑1 (MQ=60)
                                                                                     TACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCA         <  SRR4302543.604418/94‑1 (MQ=60)
                                                                                       CCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGC       >  SRR4302543.3507363/1‑94 (MQ=60)
                                                                                       CCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGC       >  SRR4302543.2727920/1‑94 (MQ=60)
                                                                                       CCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGC       >  SRR4302543.2525750/1‑94 (MQ=60)
                                                                                       CCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGAAGC       >  SRR4302543.1968386/1‑94 (MQ=60)
                                                                                       CCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGAAGAGCAACTTCTGCAGC       >  SRR4302543.2525749/1‑94 (MQ=60)
                                                                                        CAGGAGCTTATCAGGTTGATATCTGGCTTAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCC      <  SRR4302543.7627269/94‑1 (MQ=60)
                                                                                        CAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCC      <  SRR4302543.7440161/94‑1 (MQ=60)
                                                                                        CAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCC      >  SRR4302543.1414939/1‑94 (MQ=60)
                                                                                        CAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCC      >  SRR4302543.654640/1‑94 (MQ=60)
                                                                                        CAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCC      <  SRR4302543.7627268/94‑1 (MQ=60)
                                                                                         AGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCC     >  SRR4302543.6255867/1‑94 (MQ=60)
                                                                                         AGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA     >  SRR4302543.1954036/1‑94 (MQ=60)
                                                                                         AGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA     <  SRR4302543.393458/94‑1 (MQ=60)
                                                                                         AGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA     >  SRR4302543.20738/1‑94 (MQ=60)
                                                                                          GGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCAC    >  SRR4302543.1050186/1‑94 (MQ=60)
                                                                                           GAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACA   <  SRR4302543.1230234/94‑1 (MQ=60)
                                                                                           GAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACA   >  SRR4302543.1066205/1‑94 (MQ=60)
                                                                                            AGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAG  >  SRR4302543.3958288/1‑94 (MQ=60)
                                                                                            AGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAG  >  SRR4302543.1629194/1‑94 (MQ=60)
                                                                                             |                                                                                            
TATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAG  >  NC_000913/3286584‑3286769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: