Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,286,677 |
A→G |
T75A (ACT→GCT) |
yraJ → |
putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,286,677 | 0 | A | G | 100.0%
| 706.2
/ NA
| 221 | T75A (ACT→GCT) | yraJ | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (100/121); total (100/121) |
Only 100 of 224 total aligned reads displayed.
TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA > NC_000913/3286587‑3286766
|
cGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTa < 2:3763561/93‑1 (MQ=255)
cGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTa < 2:2990490/93‑1 (MQ=255)
cGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTa > 2:644283/1‑93 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATc > 2:4105188/1‑93 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATc < 1:4019536/93‑1 (MQ=255)
cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg > 2:3267068/1‑93 (MQ=255)
ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAgg < 1:2801378/93‑1 (MQ=255)
ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAgg > 1:901513/1‑93 (MQ=255)
cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACATCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt < 2:3317527/93‑1 (MQ=255)
cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt < 2:3551505/93‑1 (MQ=255)
cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt < 1:1283961/93‑1 (MQ=255)
ttATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCCCAACTACCAGGAGCTTATCAGGTTg > 1:480748/1‑93 (MQ=255)
ttATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTg > 1:190228/1‑93 (MQ=255)
tGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGata > 2:515981/1‑93 (MQ=255)
gCTGGAAACCACAAAAAGTGGTATGCAAACACCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGatat < 2:4510069/93‑1 (MQ=255)
gCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGatat > 2:2383635/1‑93 (MQ=255)
tGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt < 1:3667161/93‑1 (MQ=255)
gAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTgg < 2:1812428/93‑1 (MQ=255)
aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc < 1:2581769/93‑1 (MQ=255)
aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc > 2:1763709/1‑93 (MQ=255)
aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc > 1:3812223/1‑93 (MQ=255)
aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc < 2:3254730/93‑1 (MQ=255)
aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc < 1:3543516/93‑1 (MQ=255)
aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc < 2:823645/93‑1 (MQ=255)
aCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTg > 1:1380148/1‑93 (MQ=255)
ccACAAAACGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGa > 2:4565926/1‑93 (MQ=255)
ccACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGa > 2:1418722/1‑93 (MQ=255)
ccACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGa < 2:1732457/93‑1 (MQ=255)
cacaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGaa < 2:2491482/93‑1 (MQ=255)
cacaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGaa > 2:1122947/1‑93 (MQ=255)
cacaAAAAGGGGTATGCAAACAACCGATCTGTCGCGGTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAAGTTGATATTTGGCTGaa > 2:3476917/1‑93 (MQ=255)
acaAAAAGTGGTATGCAAACACCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt < 2:2713829/93‑1 (MQ=255)
acaAAAAGTGGTATGCAAACAACCGATCTGTCTCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt < 1:2477065/93‑1 (MQ=255)
acaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt < 1:2057162/93‑1 (MQ=255)
acaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt > 1:3843419/1‑93 (MQ=255)
acaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAt < 2:3777429/93‑1 (MQ=255)
acaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTAACAGGAGCTTATCAGGTTGATATCTGGCTGAAt > 1:2241500/1‑93 (MQ=255)
caAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATa > 1:278088/1‑93 (MQ=255)
caAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGATTGATATCTGGCTGAATa > 1:320137/1‑93 (MQ=255)
aaaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaa < 1:4578373/93‑1 (MQ=255)
aaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaaa < 2:1888381/93‑1 (MQ=255)
aaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaaa < 2:1017309/93‑1 (MQ=255)
aaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaaa < 1:163204/93‑1 (MQ=255)
gTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaaga < 1:2993505/93‑1 (MQ=255)
tGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaa < 2:4669324/93‑1 (MQ=255)
gTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAgg < 2:2143182/93‑1 (MQ=255)
gTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAgg < 2:2279918/93‑1 (MQ=255)
gCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATAAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTc < 1:704895/93‑1 (MQ=255)
aaaCAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcac > 1:1119745/1‑93 (MQ=255)
acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGCATAAAAAGAAGGTTTCACAg > 2:1933897/1‑93 (MQ=255)
acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAg < 1:4451179/93‑1 (MQ=255)
caacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGa < 2:1554428/93‑1 (MQ=255)
acCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaa > 1:1440542/1‑93 (MQ=255)
cGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaa < 1:3142720/93‑1 (MQ=255)
aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaaa < 2:2221625/93‑1 (MQ=255)
aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaaa < 2:858723/93‑1 (MQ=255)
tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACa < 1:868780/93‑1 (MQ=255)
tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACa > 1:4397917/1‑93 (MQ=255)
cgcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAt < 1:770207/93‑1 (MQ=255)
cgcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAt < 1:4083717/93‑1 (MQ=255)
gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt > 1:4511550/1‑93 (MQ=255)
gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt > 2:4430675/1‑93 (MQ=255)
gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt > 2:2813328/1‑93 (MQ=255)
gTTTTTCAAAAAGATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTa > 1:2531722/1‑93 (MQ=255)
tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc < 2:959213/93‑1 (MQ=255)
tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc < 2:3843419/93‑1 (MQ=255)
tttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAc < 2:4351993/93‑1 (MQ=255)
ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc < 1:2004076/93‑1 (MQ=255)
ttttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTAcc < 2:1353175/93‑1 (MQ=255)
tttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCg > 1:1198244/1‑93 (MQ=255)
cAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCa > 1:3804209/1‑93 (MQ=255)
aaaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCaa < 2:3107735/93‑1 (MQ=255)
aaaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCaa < 1:1547999/93‑1 (MQ=255)
aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt < 2:1541975/93‑1 (MQ=255)
aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt > 1:2146646/1‑93 (MQ=255)
aaaaaTATGCACAACTACCAGGAGCTTATCAGGCTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATg > 1:1924790/1‑93 (MQ=255)
aaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCa < 1:1164602/93‑1 (MQ=255)
aaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCag > 2:1691452/1‑93 (MQ=255)
atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga < 2:3928946/93‑1 (MQ=255)
atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga < 2:124866/93‑1 (MQ=255)
atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga > 2:4679701/1‑93 (MQ=255)
tatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCagat > 1:2320926/1‑92 (MQ=255)
tatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCagag > 2:4149425/1‑93 (MQ=255)
atGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGc < 2:3156695/93‑1 (MQ=255)
tGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCa > 1:1479444/1‑93 (MQ=255)
gCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCaa < 2:1506855/93‑1 (MQ=255)
gCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCaa > 1:3769376/1‑93 (MQ=255)
cacaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAAc > 2:2618699/1‑93 (MQ=255)
acaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACt > 1:3106964/1‑93 (MQ=255)
acaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACt > 2:3382787/1‑93 (MQ=255)
caACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACtt > 2:2420634/1‑93 (MQ=255)
caACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGCTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACtt > 2:3684601/1‑93 (MQ=255)
aaCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGCGCAACTTc < 2:4542195/93‑1 (MQ=255)
tACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGc < 2:711600/93‑1 (MQ=255)
tACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGc > 2:777280/1‑93 (MQ=255)
ccAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAg > 2:685376/1‑93 (MQ=255)
cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc > 2:778655/1‑93 (MQ=255)
cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc > 2:3848827/1‑93 (MQ=255)
cAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGc > 2:902356/1‑93 (MQ=255)
ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca > 2:2471279/1‑93 (MQ=255)
|
TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA > NC_000913/3286587‑3286766
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGT > NC_000913/3286585‑3286770
|
ATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGC < SRR4302535.4063766/94‑1 (MQ=60)
TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTT < SRR4302535.1472619/94‑1 (MQ=60)
GACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATC > SRR4302535.2562514/1‑94 (MQ=60)
ACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCA < SRR4302535.4047040/94‑1 (MQ=60)
ACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCA < SRR4302535.3832436/94‑1 (MQ=60)
CCCCATTATGCTGGAAACCACAGAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAG < SRR4302535.914435/94‑1 (MQ=60)
CCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAG < SRR4302535.1202881/94‑1 (MQ=60)
CCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGG < SRR4302535.1336774/94‑1 (MQ=60)
CCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGG > SRR4302535.907896/1‑94 (MQ=60)
CCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGT < SRR4302535.2821303/94‑1 (MQ=60)
CATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTT < SRR4302535.1293112/94‑1 (MQ=60)
CATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTT < SRR4302535.1792806/94‑1 (MQ=60)
ATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCCCAACTACCAGGAGCTTATCAGGTTG > SRR4302535.484119/1‑94 (MQ=60)
ATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTG > SRR4302535.191541/1‑94 (MQ=60)
TTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGA > SRR4302535.3649793/1‑94 (MQ=60)
TGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATAT > SRR4302535.899762/1‑94 (MQ=60)
TGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTG < SRR4302535.3849373/94‑1 (MQ=60)
TGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTG < SRR4302535.3692554/94‑1 (MQ=60)
GAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGC > SRR4302535.3838531/1‑94 (MQ=60)
AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCT > SRR4302535.3788796/1‑94 (MQ=60)
AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCT < SRR4302535.3568130/94‑1 (MQ=60)
AAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCT < SRR4302535.2600316/94‑1 (MQ=60)
AACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTG > SRR4302535.1389991/1‑94 (MQ=60)
CACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAT < SRR4302535.2840424/94‑1 (MQ=60)
CACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAAT > SRR4302535.3869893/1‑94 (MQ=60)
CACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTAACAGGAGCTTATCAGGTTGATATCTGGCTGAAT > SRR4302535.2257445/1‑94 (MQ=60)
ACAAAAAGTGGTATGCAAACAACCGATCTGTCTCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA < SRR4302535.2494930/94‑1 (MQ=60)
ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA < SRR4302535.2071981/94‑1 (MQ=60)
ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA > SRR4302535.1934794/1‑94 (MQ=60)
ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATA > SRR4302535.280027/1‑94 (MQ=60)
ACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGATTGATATCTGGCTGAATA > SRR4302535.322352/1‑94 (MQ=60)
AAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAA < SRR4302535.4609561/94‑1 (MQ=60)
AAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAACAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAA > SRR4302535.3411603/1‑94 (MQ=60)
AAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAA < SRR4302535.3808353/94‑1 (MQ=60)
AAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAG < SRR4302535.164343/94‑1 (MQ=60)
AGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGA < SRR4302535.4527069/94‑1 (MQ=60)
AGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGA < SRR4302535.4686423/94‑1 (MQ=60)
GTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAA < SRR4302535.3014494/94‑1 (MQ=60)
GGTATGCAAACAGCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGG < SRR4302535.4583132/94‑1 (MQ=60)
GGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGG < SRR4302535.2882387/94‑1 (MQ=60)
GGTATGCAAACAACCGATCTGTCGCGTTATTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGG < SRR4302535.2043725/94‑1 (MQ=60)
GTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGT < SRR4302535.24705/94‑1 (MQ=60)
GTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGT > SRR4302535.3406489/1‑94 (MQ=60)
TATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTT < SRR4302535.3858063/94‑1 (MQ=60)
ATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTT > SRR4302535.963785/1‑94 (MQ=60)
TGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTC < SRR4302535.2292237/94‑1 (MQ=60)
TGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTC < SRR4302535.851698/94‑1 (MQ=60)
GCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATAAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCA < SRR4302535.709844/94‑1 (MQ=60)
CAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCAC > SRR4302535.1127731/1‑94 (MQ=60)
AAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACA > SRR4302535.3912110/1‑94 (MQ=60)
ACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGA < SRR4302535.4481706/94‑1 (MQ=60)
CAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAA < SRR4302535.3050025/94‑1 (MQ=60)
AACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAA > SRR4302535.1450847/1‑94 (MQ=60)
ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAA < SRR4302535.2805037/94‑1 (MQ=60)
CCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAA > SRR4302535.1551335/1‑94 (MQ=60)
CGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAA < SRR4302535.3164585/94‑1 (MQ=60)
GATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAA > SRR4302535.3219807/1‑94 (MQ=60)
GATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAA > SRR4302535.208181/1‑94 (MQ=60)
GATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAA > SRR4302535.2458452/1‑94 (MQ=60)
GTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA > SRR4302535.4428020/1‑94 (MQ=60)
GTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACA < SRR4302535.1638564/94‑1 (MQ=60)
TCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAT < SRR4302535.2507622/94‑1 (MQ=60)
TCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAT < SRR4302535.874927/94‑1 (MQ=60)
TCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAT < SRR4302535.207244/94‑1 (MQ=60)
CGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATT < SRR4302535.4111643/94‑1 (MQ=60)
CGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATT < SRR4302535.775626/94‑1 (MQ=60)
CGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATT > SRR4302535.4542494/1‑94 (MQ=60)
CGTTTTTCAAAAAGATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTA > SRR4302535.2549963/1‑94 (MQ=60)
CGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTA > SRR4302535.1992758/1‑94 (MQ=60)
TTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCG < SRR4302535.2018518/94‑1 (MQ=60)
TTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCG > SRR4302535.1404807/1‑94 (MQ=60)
TTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCG > SRR4302535.1206829/1‑94 (MQ=60)
TTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCC > SRR4302535.2777080/1‑94 (MQ=60)
TCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCA > SRR4302535.3830432/1‑94 (MQ=60)
CAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAA > SRR4302535.127480/1‑94 (MQ=60)
AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT > SRR4302535.730692/1‑94 (MQ=60)
AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT < SRR4302535.1559150/94‑1 (MQ=60)
AAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAT > SRR4302535.2162087/1‑94 (MQ=60)
AAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATG > SRR4302535.4244191/1‑94 (MQ=60)
AAAAAATATGCACAACTACCAGGAGCTTATCAGGCTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATG > SRR4302535.1938661/1‑94 (MQ=60)
AAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCA > SRR4302535.1663945/1‑94 (MQ=60)
AAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAG < SRR4302535.1172920/94‑1 (MQ=60)
AATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGA < SRR4302535.1419791/94‑1 (MQ=60)
ATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAT > SRR4302535.2337537/1‑94 (MQ=60)
TATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGATC < SRR4302535.4455268/94‑1 (MQ=60)
ATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCA > SRR4302535.1490029/1‑94 (MQ=60)
TGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAA > SRR4302535.3795392/1‑94 (MQ=60)
TCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTCCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAAC < SRR4302535.611782/94‑1 (MQ=60)
CACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACT > SRR4302535.2503750/1‑94 (MQ=60)
CACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACT > SRR4302535.3128594/1‑94 (MQ=60)
ACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTT < SRR4302535.4047869/94‑1 (MQ=60)
CAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAACTACATTTACCGCCAATGCAGAGCAACTTC > SRR4302535.11445/1‑94 (MQ=60)
AACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCT > SRR4302535.4451102/1‑94 (MQ=60)
TACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCA > SRR4302535.316372/1‑94 (MQ=60)
ACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAG > SRR4302535.2238364/1‑94 (MQ=60)
CCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGC > SRR4302535.485314/1‑94 (MQ=60)
GAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACA < SRR4302535.508567/94‑1 (MQ=60)
GAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACA > SRR4302535.3457375/1‑94 (MQ=60)
GAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACA > SRR4302535.1146278/1‑94 (MQ=60)
AGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAG < SRR4302535.3703117/94‑1 (MQ=60)
AGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAG < SRR4302535.3658347/94‑1 (MQ=60)
AGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAG > SRR4302535.3250646/1‑94 (MQ=60)
GCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGT < SRR4302535.1339350/94‑1 (MQ=60)
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ATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGT > NC_000913/3286585‑3286770
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
