Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,289,431	T→C	G150G (GGT→GGC)	yraK →	putative fimbrial protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,289,431	0	T	C	99.4%	1083.5 / ‑5.3	348	G150G (GGT→GGC)	yraK	putative fimbrial protein
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (195/151); total (196/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01

Only 100 of 358 total aligned reads displayed.

CGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT  >  NC_000913/3289341‑3289520

  aCCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATa                                                                                       <  2:4939896/93‑1 (MQ=255)

  aCCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATa                                                                                       >  1:2184339/1‑93 (MQ=255)

  aCCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATa                                                                                       >  2:761433/1‑93 (MQ=255)

   ccAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATAc                                                                                      <  1:2799663/93‑1 (MQ=255)

    cAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACg                                                                                     >  1:5326896/1‑93 (MQ=255)

      ggTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtc                                                                                   <  1:3587783/93‑1 (MQ=255)

        ttGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtctc                                                                                 >  1:5156722/1‑93 (MQ=255)

        ttGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtctc                                                                                 <  2:3443138/93‑1 (MQ=255)

        ttGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtctc                                                                                 <  1:4249123/93‑1 (MQ=255)

        ttGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGtctc                                                                                 <  1:4151836/93‑1 (MQ=255)

         tGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCg                                                                                >  1:7220862/1‑93 (MQ=255)

          gTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGt                                                                               <  2:1561765/93‑1 (MQ=255)

            ctctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTa                                                                             <  2:2720017/93‑1 (MQ=255)

              ctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATg                                                                           <  2:4027790/93‑1 (MQ=255)

              ctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATg                                                                           <  2:1072127/93‑1 (MQ=255)

              ctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATg                                                                           >  1:4834450/1‑93 (MQ=255)

              ctGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATg                                                                           <  2:5517989/93‑1 (MQ=255)

               tGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATgg                                                                          >  2:357422/1‑93 (MQ=255)

                gTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGa                                                                         >  1:6565198/1‑93 (MQ=255)

                   aaCACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAccc                                                                      <  2:1923118/93‑1 (MQ=255)

                   aaCACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAccc                                                                      >  1:6708617/1‑93 (MQ=255)

                    acacCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCg                                                                     >  2:2526274/1‑93 (MQ=255)

                       cccGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTa                                                                  <  2:2830801/93‑1 (MQ=255)

                        ccGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTaa                                                                 >  2:3668429/1‑93 (MQ=255)

                        ccGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTaa                                                                 <  2:4629601/93‑1 (MQ=255)

                         cGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAat                                                                <  2:412054/93‑1 (MQ=255)

                         cGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAat                                                                >  2:352358/1‑93 (MQ=255)

                         cGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAat                                                                >  1:695951/1‑93 (MQ=255)

                           aTTCACACAGATAAAAAACAACACGGCATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAatat                                                              >  2:6432596/1‑93 (MQ=255)

                            ttCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAtt                                                             >  1:73359/1‑93 (MQ=255)

                            ttCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAtt                                                             >  2:440714/1‑93 (MQ=255)

                            ttCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAtt                                                             >  2:3845361/1‑93 (MQ=255)

                             tCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTg                                                            <  2:5674494/93‑1 (MQ=255)

                             tCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTg                                                            >  2:85765/1‑93 (MQ=255)

                             tCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTg                                                            <  1:1425870/93‑1 (MQ=255)

                               acacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGt                                                          <  2:7472038/93‑1 (MQ=255)

                                cacaGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTg                                                         >  2:6079827/1‑93 (MQ=255)

                                  caGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCg                                                       >  2:2148684/1‑93 (MQ=255)

                                  caGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGCGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCg                                                       >  2:1875272/1‑93 (MQ=255)

                                   aGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGa                                                      >  1:1622499/1‑93 (MQ=255)

                                    gATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGGTAATATTGGTGCGaa                                                     >  2:7037817/1‑93 (MQ=255)

                                      tAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAacc                                                   >  2:1788729/1‑92 (MQ=255)

                                        aaaaaCAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAaacc                                                 >  2:4757397/1‑93 (MQ=255)

                                          aaaCAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAcaccac                                               >  2:7424263/1‑93 (MQ=255)

                                           aacaacACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACaccacc                                              >  1:7627236/1‑93 (MQ=255)

                                            acaacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCt                                             <  1:1032996/93‑1 (MQ=255)

                                            acaacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCt                                             >  1:5941351/1‑93 (MQ=255)

                                             caacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCtt                                            <  1:7902491/93‑1 (MQ=255)

                                              aacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCttt                                           <  2:1234247/93‑1 (MQ=255)

                                              aacaCGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCttt                                           >  2:536188/1‑93 (MQ=255)

                                               acacGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTa                                          >  2:3206986/1‑93 (MQ=255)

                                                 acGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAcc                                        >  1:3057365/1‑93 (MQ=255)

                                                 acGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAcc                                        >  2:6907953/1‑93 (MQ=255)

                                                 acGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAcc                                        <  1:1902277/93‑1 (MQ=255)

                                                   ggTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCt                                      >  1:6028430/1‑93 (MQ=255)

                                                      atatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa                                   <  1:3076246/93‑1 (MQ=255)

                                                      atatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTa                                   <  2:3006602/93‑1 (MQ=255)

                                                       tatTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAt                                  >  2:240384/1‑93 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                <  2:6896483/93‑1 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                >  1:1185015/1‑93 (MQ=255)

                                                         ttCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGt                                >  1:3291441/1‑93 (MQ=255)

                                                          tCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTc                               >  1:7508944/1‑93 (MQ=255)

                                                              ctgcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCa                           >  2:3309451/1‑93 (MQ=255)

                                                                gcAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAg                         <  2:373518/93‑1 (MQ=255)

                                                                  aaCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGcc                       >  2:597945/1‑93 (MQ=255)

                                                                   aCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCa                      >  2:5765940/1‑93 (MQ=255)

                                                                   aCCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCa                      >  2:3616388/1‑93 (MQ=255)

                                                                    cccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAt                     <  2:5315805/93‑1 (MQ=255)

                                                                    cccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAt                     >  2:5064760/1‑93 (MQ=255)

                                                                     ccAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAtt                    <  2:3116118/93‑1 (MQ=255)

                                                                      cAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGTACCCGTTAATATTCGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAttt                   >  1:3763461/1‑93 (MQ=255)

                                                                       aaaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtc                  <  2:6741946/93‑1 (MQ=255)

                                                                       aaaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtc                  <  1:345289/93‑1 (MQ=255)

                                                                        aaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtct                 <  2:4360993/93‑1 (MQ=255)

                                                                        aaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtct                 <  2:1416141/93‑1 (MQ=255)

                                                                        aaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtct                 >  2:1651223/1‑93 (MQ=255)

                                                                        aaCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtct                 >  1:263872/1‑93 (MQ=255)

                                                                         aCGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTtctc                <  2:4843912/93‑1 (MQ=255)

                                                                          cGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCg               <  1:1439735/93‑1 (MQ=255)

                                                                           gggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCgg              >  2:6349731/1‑93 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGCTACGTCTCGTTATGGACCCGTTAATATTCGTGCGAACACCCCCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             <  1:6432444/93‑1 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             >  1:5849571/1‑93 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             <  1:870030/93‑1 (MQ=255)

                                                                            ggTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGc             <  1:4648937/93‑1 (MQ=255)

                                                                             gtgtTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCt            <  1:5631705/93‑1 (MQ=255)

                                                                             gtgtTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCt            >  2:2972718/1‑93 (MQ=255)

                                                                               gtTTGCCAGGGCGATACGTCTTGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCg          <  1:619193/93‑1 (MQ=255)

                                                                                tttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGa         >  1:5671600/1‑93 (MQ=255)

                                                                                tttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGa         >  1:2702289/1‑93 (MQ=255)

                                                                                tttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGa         <  1:1728448/93‑1 (MQ=255)

                                                                                tttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGa         >  1:2295839/1‑93 (MQ=255)

                                                                                 ttGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGAt        <  1:2457666/93‑1 (MQ=255)

                                                                                  tGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATg       <  2:881867/93‑1 (MQ=255)

                                                                                   gCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGa      >  1:3954997/1‑93 (MQ=255)

                                                                                      ggggCGATACGTCTCTTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTCCCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  2:7726390/92‑1 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   >  2:7230688/1‑93 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  1:2521277/93‑1 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  2:7863439/93‑1 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   >  2:818221/1‑93 (MQ=255)

                                                                                      aGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCa   <  1:5959009/93‑1 (MQ=255)

CGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT  >  NC_000913/3289341‑3289520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  >  NC_000913/3289338‑3289524

AACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGC                                                                                               >  SRR4302543.2979420/1‑94 (MQ=60)

AACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGC                                                                                               >  SRR4302543.2441903/1‑94 (MQ=60)

AACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGC                                                                                               >  SRR4302543.7353644/1‑94 (MQ=60)

 actcaccacGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCG                                                                                              <  SRR4302543.2702679/85‑1 (MQ=60)

 ACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCG                                                                                              <  SRR4302543.1259569/94‑1 (MQ=60)

    GACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATA                                                                                           >  SRR4302543.2203924/1‑94 (MQ=60)

     ACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATAC                                                                                          <  SRR4302543.6887233/94‑1 (MQ=60)

     ACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATAC                                                                                          <  SRR4302543.1948194/94‑1 (MQ=60)

      CCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACG                                                                                         >  SRR4302543.5700058/1‑94 (MQ=60)

      CCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACG                                                                                         <  SRR4302543.2825263/94‑1 (MQ=60)

      CCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACG                                                                                         <  SRR4302543.6706342/94‑1 (MQ=60)

      CCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACG                                                                                         >  SRR4302543.5375062/1‑94 (MQ=60)

       CAGGTTGTCTCTGTTAACACCCGATTCGCACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGT                                                                                        <  SRR4302543.7971430/94‑1 (MQ=60)

       CAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGT                                                                                        >  SRR4302543.4211218/1‑94 (MQ=60)

       CAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGT                                                                                        >  SRR4302543.2619764/1‑94 (MQ=60)

       CAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGT                                                                                        >  SRR4302543.7408303/1‑94 (MQ=60)

        AGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTC                                                                                       >  SRR4302543.5436879/1‑94 (MQ=60)

         GGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCT                                                                                      <  SRR4302543.2763568/94‑1 (MQ=60)

         GGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCT                                                                                      <  SRR4302543.3619465/94‑1 (MQ=60)

         GGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCT                                                                                      <  SRR4302543.1642167/94‑1 (MQ=60)

         GGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCT                                                                                      <  SRR4302543.5967841/94‑1 (MQ=60)

          GTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTC                                                                                     >  SRR4302543.5203323/1‑94 (MQ=60)

          GTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTC                                                                                     >  SRR4302543.6321610/1‑94 (MQ=60)

           TTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCG                                                                                    <  SRR4302543.4189373/94‑1 (MQ=60)

           TTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCG                                                                                    >  SRR4302543.7290847/1‑94 (MQ=60)

           TTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCG                                                                                    <  SRR4302543.4287686/94‑1 (MQ=60)

            TGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGT                                                                                   >  SRR4302543.6017225/1‑94 (MQ=60)

            TGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGT                                                                                   >  SRR4302543.7386542/1‑94 (MQ=60)

             GTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTT                                                                                  >  SRR4302543.4813501/1‑94 (MQ=60)

               CTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTAT                                                                                >  SRR4302543.964916/1‑94 (MQ=60)

               CTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTAT                                                                                >  SRR4302543.4881048/1‑94 (MQ=60)

               CTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGCGTTTGCCAGGGCGATACGTCTCGTTAT                                                                                >  SRR4302543.7453063/1‑94 (MQ=60)

                TCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATG                                                                               >  SRR4302543.4878544/1‑94 (MQ=60)

                 CTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGG                                                                              >  SRR4302543.6449966/1‑94 (MQ=60)

                 CTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGG                                                                              <  SRR4302543.6106254/94‑1 (MQ=60)

                  TGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGA                                                                             >  SRR4302543.6626974/1‑94 (MQ=60)

                  TGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGA                                                                             >  SRR4302543.2839946/1‑94 (MQ=60)

                  TGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAAACCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGA                                                                             >  SRR4302543.5356607/1‑94 (MQ=60)

                   TTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGAC                                                                            <  SRR4302543.6038346/94‑1 (MQ=60)

                     TAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCC                                                                          >  SRR4302543.5953268/1‑94 (MQ=60)

                     TAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCC                                                                          >  SRR4302543.3892945/1‑94 (MQ=60)

                     TAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCC                                                                          >  SRR4302543.6771965/1‑94 (MQ=60)

                      AACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCG                                                                         <  SRR4302543.1916586/94‑1 (MQ=60)

                      AACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCG                                                                         >  SRR4302543.6608142/1‑94 (MQ=60)

                       ACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGT                                                                        <  SRR4302543.1794467/94‑1 (MQ=60)

                        CACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGGT                                                                       >  SRR4302543.7294063/1‑94 (MQ=60)

                         ACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTA                                                                      >  SRR4302543.2530897/1‑94 (MQ=60)

                          CCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAA                                                                     >  SRR4302543.4259265/1‑94 (MQ=60)

                          CCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAA                                                                     >  SRR4302543.7710193/1‑94 (MQ=60)

                           CCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAAT                                                                    <  SRR4302543.3324325/94‑1 (MQ=60)

                           CCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAAT                                                                    >  SRR4302543.702327/1‑94 (MQ=60)

                            CGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATA                                                                   <  SRR4302543.2704941/94‑1 (MQ=60)

                             GATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAT                                                                  <  SRR4302543.6615380/94‑1 (MQ=60)

                             GATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATAT                                                                  <  SRR4302543.834780/94‑1 (MQ=60)

                              ATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATT                                                                 >  SRR4302543.74025/1‑94 (MQ=60)

                              ATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATT                                                                 <  SRR4302543.4731014/94‑1 (MQ=60)

                              ATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATT                                                                 >  SRR4302543.5693472/1‑94 (MQ=60)

                                TCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGG                                                               <  SRR4302543.1305338/94‑1 (MQ=60)

                                TCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGG                                                               <  SRR4302543.1438772/94‑1 (MQ=60)

                                 CACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGT                                                              <  SRR4302543.2764616/94‑1 (MQ=60)

                                 CACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGT                                                              <  SRR4302543.5706908/94‑1 (MQ=60)

                                  ACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTG                                                             >  SRR4302543.3185868/1‑94 (MQ=60)

                                   CACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGC                                                            >  SRR4302543.4132741/1‑94 (MQ=60)

                                   CACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGC                                                            <  SRR4302543.2476088/94‑1 (MQ=60)

                                   CACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGC                                                            >  SRR4302543.1135217/1‑94 (MQ=60)

                                    ACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCG                                                           >  SRR4302543.1645231/1‑94 (MQ=60)

                                    ACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCG                                                           <  SRR4302543.6082605/94‑1 (MQ=60)

                                    ACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCG                                                           <  SRR4302543.3444685/94‑1 (MQ=60)

                                     CAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGA                                                          <  SRR4302543.2766551/94‑1 (MQ=60)

                                     CAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGA                                                          >  SRR4302543.1636958/1‑94 (MQ=60)

                                      AGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAA                                                         <  SRR4302543.1286043/94‑1 (MQ=60)

                                       GATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAC                                                        >  SRR4302543.6727592/1‑94 (MQ=60)

                                       GATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAAC                                                        >  SRR4302543.2011201/1‑94 (MQ=60)

                                        ATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACA                                                       >  SRR4302543.3597045/1‑94 (MQ=60)

                                        ATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACA                                                       >  SRR4302543.5735369/1‑94 (MQ=60)

                                         TAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACAC                                                      <  SRR4302543.2658325/94‑1 (MQ=60)

                                         TAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACAC                                                      >  SRR4302543.3532831/1‑94 (MQ=60)

                                          AAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACC                                                     <  SRR4302543.3733483/94‑1 (MQ=60)

                                           AAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCA                                                    <  SRR4302543.5999414/94‑1 (MQ=60)

                                           AAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCA                                                    >  SRR4302543.7178484/1‑94 (MQ=60)

                                            AAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCAC                                                   <  SRR4302543.5842101/94‑1 (MQ=60)

                                            AAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCAC                                                   <  SRR4302543.3153944/94‑1 (MQ=60)

                                             AAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACC                                                  <  SRR4302543.5418303/94‑1 (MQ=60)

                                             AAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACC                                                  >  SRR4302543.4995848/1‑94 (MQ=60)

                                             AAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACC                                                  >  SRR4302543.7699622/1‑94 (MQ=60)

                                             AAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACC                                                  <  SRR4302543.6155129/94‑1 (MQ=60)

                                              AACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCT                                                 >  SRR4302543.5184261/1‑94 (MQ=60)

                                              AACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCT                                                 >  SRR4302543.5995717/1‑94 (MQ=60)

                                               ACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTT                                                <  SRR4302543.1042167/94‑1 (MQ=60)

                                                CAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTT                                               <  SRR4302543.7788017/94‑1 (MQ=60)

                                                CAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTT                                               <  SRR4302543.7976767/94‑1 (MQ=60)

                                                CAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTT                                               >  SRR4302543.2130291/1‑94 (MQ=60)

                                                  ACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAC                                             >  SRR4302543.1076211/1‑94 (MQ=60)

                                                  ACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTAC                                             >  SRR4302543.3632931/1‑94 (MQ=60)

                                                   CACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACC                                            <  SRR4302543.6795896/94‑1 (MQ=60)

                                                   CACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACC                                            >  SRR4302543.3084884/1‑94 (MQ=60)

                                                   CACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACC                                            <  SRR4302543.2481766/94‑1 (MQ=60)

                                                    ACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCC                                           <  SRR4302543.1919395/94‑1 (MQ=60)

                                                    ACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCC                                           >  SRR4302543.3093900/1‑94 (MQ=60)

                                                    ACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCC                                           >  SRR4302543.3093901/1‑94 (MQ=60)

                                                     CGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCT                                          >  SRR4302543.6084696/1‑94 (MQ=60)

                                                     CGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCT                                          >  SRR4302543.4603728/1‑94 (MQ=60)

                                                     CGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCT                                          >  SRR4302543.3599680/1‑94 (MQ=60)

                                                      GGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTG                                         >  SRR4302543.7995992/1‑94 (MQ=60)

                                                      GGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGCCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTT                                         >  SRR4302543.7791367/1‑94 (MQ=60)

                                                        TATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTA                                       >  SRR4302543.4468401/1‑94 (MQ=60)

                                                         ATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAT                                      >  SRR4302543.3874296/1‑94 (MQ=60)

                                                         ATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAT                                      >  SRR4302543.1429957/1‑94 (MQ=60)

                                                         ATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTAT                                      <  SRR4302543.3103914/94‑1 (MQ=60)

                                                          TATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATG                                     >  SRR4302543.2252815/1‑94 (MQ=60)

                                                          TATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATG                                     <  SRR4302543.7668318/94‑1 (MQ=60)

                                                          TATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACATCTCGTTATGAACCCGTTACTATGGGTGCGACCACCACCTTTccccttgatt                                     >  SRR4302543.2709537/1‑84 (MQ=60)

                                                          TATTCTGCTGCAACCCAAACGGGGGTTTGCCAGGGCGATACGTCTCGTTATGGACCTGTTAATATTGGTGAGAACACCACCTTTCCCCTGTATG                                     >  SRR4302543.2252816/1‑94 (MQ=60)

                                                           ATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGT                                    >  SRR4302543.1195712/1‑94 (MQ=60)

                                                           ATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGT                                    >  SRR4302543.3321147/1‑94 (MQ=60)

                                                            TTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTC                                   >  SRR4302543.7580696/1‑94 (MQ=60)

                                                              CTGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCAC                                 >  SRR4302543.1600129/1‑94 (MQ=60)

                                                               TGCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACC                                >  SRR4302543.3055178/1‑94 (MQ=60)

                                                                GCTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCA                               >  SRR4302543.909147/1‑94 (MQ=60)

                                                                 CTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAA                              >  SRR4302543.6009953/1‑94 (MQ=60)

                                                                 CTGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAA                              >  SRR4302543.6127654/1‑94 (MQ=60)

                                                                  TGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAG                             >  SRR4302543.7001374/1‑94 (MQ=60)

                                                                  TGCAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAG                             <  SRR4302543.1531007/94‑1 (MQ=60)

                                                                    CAACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCC                           <  SRR4302543.2548735/94‑1 (MQ=60)

                                                                     AACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCA                          >  SRR4302543.2425512/1‑94 (MQ=60)

                                                                      ACCCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCAT                         <  SRR4302543.1444846/94‑1 (MQ=60)

                                                                      ACCCAAACGGGTGTTTGCCAGGGCGACACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCCTTACCCTGTATGTCACCAAGCCAT                         >  SRR4302543.7558967/1‑94 (MQ=60)

                                                                        CCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGTACCCGTTAATATTCGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTT                       >  SRR4302543.3796587/1‑94 (MQ=60)

                                                                        CCAAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTT                       >  SRR4302543.985622/1‑94 (MQ=60)

                                                                          AATCGGGTGTTGTCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTGCCCTGTATGTCACCAAGCCATTTCT                     <  SRR4302543.465654/94‑1 (MQ=60)

                                                                          AAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCT                     <  SRR4302543.348478/94‑1 (MQ=60)

                                                                          AAACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCT                     >  SRR4302543.266185/1‑94 (MQ=60)

                                                                            ACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCG                   <  SRR4302543.5989670/94‑1 (MQ=60)

                                                                            ACGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCG                   >  SRR4302543.190617/1‑94 (MQ=60)

                                                                             CGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGG                  <  SRR4302543.1452743/94‑1 (MQ=60)

                                                                             CGGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGG                  >  SRR4302543.4180462/1‑94 (MQ=60)

                                                                              GGGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGC                 >  SRR4302543.5902800/1‑94 (MQ=60)

                                                                               GGTGTTTGCCAGGGCGCTACGTCTCGTTATGGACCCGTTAATATTCGTGCGAACACCCCCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCT                <  SRR4302543.6493055/94‑1 (MQ=60)

                                                                               GGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCT                <  SRR4302543.877792/94‑1 (MQ=60)

                                                                               GGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCT                <  SRR4302543.4691241/94‑1 (MQ=60)

                                                                               GGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCT                <  SRR4302543.6493056/94‑1 (MQ=60)

                                                                               GGTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCT                >  SRR4302543.7657521/1‑94 (MQ=60)

                                                                                GTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTC               <  SRR4302543.5683023/94‑1 (MQ=60)

                                                                                GTGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTC               <  SRR4302543.1564568/94‑1 (MQ=60)

                                                                                GTGTTGGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTC               <  SRR4302543.7077299/94‑1 (MQ=60)

                                                                                 TGTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCG              >  SRR4302543.7128389/1‑94 (MQ=60)

                                                                                  GTTTGCCAGGGCGATACGTCTTGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGA             <  SRR4302543.624861/94‑1 (MQ=60)

                                                                                  GTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGA             >  SRR4302543.2316776/1‑94 (MQ=60)

                                                                                  GTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGA             >  SRR4302543.5723365/1‑94 (MQ=60)

                                                                                  GTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGA             >  SRR4302543.2726800/1‑94 (MQ=60)

                                                                                  GTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGA             >  SRR4302543.2726801/1‑94 (MQ=60)

                                                                                  GTTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGA             >  SRR4302543.5286456/1‑94 (MQ=60)

                                                                                   TTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGAT            <  SRR4302543.1743853/94‑1 (MQ=60)

                                                                                   TTTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGAT            <  SRR4302543.3765200/94‑1 (MQ=60)

                                                                                    TTGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATG           <  SRR4302543.2479827/94‑1 (MQ=60)

                                                                                     TGCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGA          >  SRR4302543.3989998/1‑94 (MQ=60)

                                                                                      GCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGcagac         >  SRR4302543.5349002/1‑89 (MQ=60)

                                                                                      GCCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAA‑CCATTTCTtcgcctcatgacc        >  SRR4302543.4705687/1‑81 (MQ=60)

                                                                                       CCAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACC        <  SRR4302543.2849499/94‑1 (MQ=60)

                                                                                        CAGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCA       >  SRR4302543.3264697/1‑94 (MQ=60)

                                                                                         AGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGGACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT      >  SRR4302543.4153527/1‑94 (MQ=60)

                                                                                         AGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT      >  SRR4302543.2360970/1‑94 (MQ=60)

                                                                                         AGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT      <  SRR4302543.6013552/94‑1 (MQ=60)

                                                                                         AGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT      <  SRR4302543.5360378/94‑1 (MQ=60)

                                                                                         AGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT      <  SRR4302543.2544194/94‑1 (MQ=60)

                                                                                         AGGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCAT      <  SRR4302543.144176/94‑1 (MQ=60)

                                                                                          GGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATT     >  SRR4302543.7459019/1‑94 (MQ=60)

                                                                                          GGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATT     >  SRR4302543.3882691/1‑94 (MQ=60)

                                                                                          GGGCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACAATT     >  SRR4302543.3428189/1‑94 (MQ=60)

                                                                                            GCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCC   <  SRR4302543.6910011/94‑1 (MQ=60)

                                                                                            GCGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCC   >  SRR4302543.5791122/1‑94 (MQ=60)

                                                                                             GGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  <  SRR4302543.4010827/94‑1 (MQ=60)

                                                                                             CGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  >  SRR4302543.6560232/1‑94 (MQ=60)

                                                                                             CGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  >  SRR4302543.5490726/1‑94 (MQ=60)

                                                                                             CGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  <  SRR4302543.5636508/94‑1 (MQ=60)

                                                                                             CGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  >  SRR4302543.5387629/1‑94 (MQ=60)

                                                                                             CGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  >  SRR4302543.5119888/1‑94 (MQ=60)

                                                                                             CGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  <  SRR4302543.4010826/94‑1 (MQ=60)

AACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCG  >  NC_000913/3289338‑3289524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`