Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,366,054 |
A→G |
H198R (CAC→CGC) |
yhcG → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,366,054 | 0 | A | G | 99.5%
| 654.6
/ NA
| 211 | H198R (CAC→CGC) | yhcG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (103/107); minor base C (1/0); total (104/107) |
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 231 total aligned reads displayed.
GGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG > NC_000913/3365964‑3366143
|
ggTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAAcgcg > 2:2430504/1‑93 (MQ=255)
tGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGGCAAATCAGCCATGCTGCAACAACGCGCTcc > 2:479215/1‑93 (MQ=255)
tGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTcc < 2:3935650/93‑1 (MQ=255)
tGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTcc < 1:4223390/93‑1 (MQ=255)
ttCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTg < 2:3518386/93‑1 (MQ=255)
tCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGc < 1:196587/93‑1 (MQ=255)
cGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGcc < 1:1478189/93‑1 (MQ=255)
cAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCgag > 2:736376/1‑93 (MQ=255)
aGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCgaga > 1:3784847/1‑93 (MQ=255)
aGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCgaga < 1:4310030/93‑1 (MQ=255)
gCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAc > 2:1869027/1‑93 (MQ=255)
cTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACg > 1:1074364/1‑93 (MQ=255)
agagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCa < 2:2505947/93‑1 (MQ=255)
agagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCa < 2:2934290/93‑1 (MQ=255)
agagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCa < 1:1623395/93‑1 (MQ=255)
agagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCa > 2:2951211/1‑93 (MQ=255)
gagCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCat < 2:4293892/93‑1 (MQ=255)
gCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCatat > 2:1799407/1‑93 (MQ=255)
cGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAtt < 1:4574053/93‑1 (MQ=255)
gCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGGCGCATAttct > 2:2553828/1‑93 (MQ=255)
aaaTTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAttcttc < 2:3154505/93‑1 (MQ=255)
aaaTTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAttcttc > 1:3648720/1‑93 (MQ=255)
aaTTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTcc > 1:3683433/1‑93 (MQ=255)
ttGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGc > 2:4249419/1‑93 (MQ=255)
gCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCaa < 2:4025435/93‑1 (MQ=255)
cGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAAc < 1:2823865/93‑1 (MQ=255)
gACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACa > 1:466461/1‑93 (MQ=255)
gACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACa < 1:1829600/93‑1 (MQ=255)
aCCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAg < 1:4191146/93‑1 (MQ=255)
cccAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAgg > 1:545176/1‑93 (MQ=255)
ccAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGc > 1:4386806/1‑93 (MQ=255)
ccAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCCCTCCTGCCGAGACGCATATTCTTCCGCAACAGGc > 1:712870/1‑93 (MQ=255)
aGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCAATGCTGCAACAACCCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGcaa > 2:156559/1‑91 (MQ=255)
gTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGAt < 2:2089747/93‑1 (MQ=255)
gTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGAt < 2:1489913/93‑1 (MQ=255)
ttttATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATa < 1:2183555/93‑1 (MQ=255)
ttttATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATa < 1:435559/93‑1 (MQ=255)
ttttATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATa < 1:492520/93‑1 (MQ=255)
tttATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGTAACAGGCGATAc > 2:3186110/1‑93 (MQ=255)
tttATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAc < 1:2807200/93‑1 (MQ=255)
aTGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAcgcg > 2:3378936/1‑93 (MQ=255)
tGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGa > 2:2253341/1‑93 (MQ=255)
tGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGa > 2:4589997/1‑93 (MQ=255)
aGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATc > 2:1224147/1‑93 (MQ=255)
gACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCtt < 2:2687944/93‑1 (MQ=255)
accctactGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCttt < 2:183000/90‑1 (MQ=255)
cacTCCTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTtg < 2:1022992/93‑1 (MQ=255)
cacTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTtg < 1:1250418/93‑1 (MQ=255)
cacTACTGTCACAAGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTtg > 2:4502338/1‑93 (MQ=255)
actactGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTtgt < 2:569731/93‑1 (MQ=255)
actactGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTtgt < 2:246261/93‑1 (MQ=255)
ctactGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTtgtg < 1:3030310/93‑1 (MQ=255)
actGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCt > 1:871580/1‑93 (MQ=255)
ctGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTCTGTGCTc > 1:2282664/1‑93 (MQ=255)
tGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCg > 1:2884404/1‑93 (MQ=255)
gTCACATGACAAATCAGCCATGCTGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGa < 2:3469190/93‑1 (MQ=255)
gTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGa > 2:3293025/1‑93 (MQ=255)
acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGACtt > 1:92900/1‑93 (MQ=255)
acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAtt < 2:4676699/93‑1 (MQ=255)
acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAtt < 2:3118578/93‑1 (MQ=255)
acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAtt > 2:4175459/1‑93 (MQ=255)
acaTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAtt < 2:4316888/93‑1 (MQ=255)
caTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAttt < 2:3876375/93‑1 (MQ=255)
caTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAttt > 1:2416394/1‑93 (MQ=255)
caTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAttt < 2:536082/93‑1 (MQ=255)
aTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTc > 1:2087052/1‑93 (MQ=255)
aTGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTc < 1:2970862/93‑1 (MQ=255)
tcaCAAATCAGCCATGCTGCAACACCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCt < 2:4272198/91‑1 (MQ=255)
tGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCt < 1:1325721/93‑1 (MQ=255)
gACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTg > 1:1167875/1‑93 (MQ=255)
cAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTgtc > 1:4503411/1‑91 (MQ=255)
cAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGa < 1:3162403/93‑1 (MQ=255)
cAAATCAGCCATGCTACAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGa < 1:2338460/93‑1 (MQ=255)
aaaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGaa > 2:528632/1‑93 (MQ=255)
aaaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGaa < 2:3058871/93‑1 (MQ=255)
aaaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGaa > 2:1947053/1‑93 (MQ=255)
aaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAt < 2:1303059/93‑1 (MQ=255)
aaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAt < 1:3258568/93‑1 (MQ=255)
aaTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAt < 2:1174937/93‑1 (MQ=255)
aTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAtt < 2:844590/93‑1 (MQ=255)
aTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAtt > 2:372619/1‑93 (MQ=255)
aTCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAAtt > 1:1757552/1‑93 (MQ=255)
tCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTg < 1:770848/93‑1 (MQ=255)
tCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTg > 1:2509808/1‑93 (MQ=255)
cAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGa < 1:349436/93‑1 (MQ=255)
aGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGaa < 2:4356441/93‑1 (MQ=255)
aGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGaa < 1:257291/93‑1 (MQ=255)
gCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGaaa < 2:4007572/93‑1 (MQ=255)
gCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGaaa < 1:2671199/93‑1 (MQ=255)
cATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGa > 2:65124/1‑93 (MQ=255)
cATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGa < 1:3044683/93‑1 (MQ=255)
aTGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAt < 2:4337417/93‑1 (MQ=255)
tgctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATg > 1:1123864/1‑93 (MQ=255)
tgctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATg < 1:1395540/93‑1 (MQ=255)
tgctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATg > 2:2137718/1‑93 (MQ=255)
gctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGa < 1:3347737/93‑1 (MQ=255)
ctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGaa < 1:2118688/93‑1 (MQ=255)
ctgcAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGaa < 2:2386466/93‑1 (MQ=255)
caacaaCGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAatat > 1:4000046/1‑93 (MQ=255)
aacgCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAg > 1:814618/1‑93 (MQ=255)
|
GGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG > NC_000913/3365964‑3366143
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAA > NC_000913/3365961‑3366145
|
GCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACG < SRR4302535.1036173/94‑1 (MQ=60)
CTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGC < SRR4302535.2704993/94‑1 (MQ=60)
TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG > SRR4302535.1530848/1‑94 (MQ=60)
TGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCG < SRR4302535.4400450/94‑1 (MQ=60)
GGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGC > SRR4302535.491810/1‑94 (MQ=60)
GGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGC > SRR4302535.2175787/1‑94 (MQ=60)
TGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCT < SRR4302535.4252289/94‑1 (MQ=60)
GTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTG > SRR4302535.2943639/1‑94 (MQ=60)
GTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTG > SRR4302535.1293443/1‑94 (MQ=60)
TCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCC < SRR4302535.197940/94‑1 (MQ=60)
CGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCG < SRR4302535.1488765/94‑1 (MQ=60)
GCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGA < SRR4302535.1086244/94‑1 (MQ=60)
CCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAG < SRR4302535.1705770/94‑1 (MQ=60)
CAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGA > SRR4302535.3810958/1‑94 (MQ=60)
CAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGA > SRR4302535.2404583/1‑94 (MQ=60)
CAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGA < SRR4302535.2688747/94‑1 (MQ=60)
AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAC > SRR4302535.3682773/1‑94 (MQ=60)
AGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGAC < SRR4302535.4339514/94‑1 (MQ=60)
GCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACG > SRR4302535.1082003/1‑94 (MQ=60)
AGAGCGGCAAATTGCGACCCAGTTTTATGGGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCAT > SRR4302535.4442369/1‑94 (MQ=60)
AGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCAT < SRR4302535.1635115/94‑1 (MQ=60)
AGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCAT < SRR4302535.198907/94‑1 (MQ=60)
GAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATA < SRR4302535.37705/94‑1 (MQ=60)
AGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAT > SRR4302535.3150839/1‑94 (MQ=60)
AGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATAT > SRR4302535.4369543/1‑94 (MQ=60)
GCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCGACAACGCGCTCCTGCCGAGACGCATATT < SRR4302535.3059160/94‑1 (MQ=60)
CGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTC < SRR4302535.4605232/94‑1 (MQ=60)
CGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTC > SRR4302535.2842129/1‑94 (MQ=60)
CAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTC < SRR4302535.2147329/94‑1 (MQ=60)
CAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTC > SRR4302535.3673985/1‑94 (MQ=60)
CAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTC < SRR4302535.3385447/94‑1 (MQ=60)
AAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCC > SRR4302535.3708921/1‑94 (MQ=60)
AATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCG < SRR4302535.518809/94‑1 (MQ=60)
AATTGCGACCAAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCG < SRR4302535.1946372/94‑1 (MQ=60)
CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACA < SRR4302535.2843908/94‑1 (MQ=60)
CGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACA > SRR4302535.469726/1‑94 (MQ=60)
GACCCAGTTTTATGAGCGGCCACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAG < SRR4302535.1334743/94‑1 (MQ=60)
GACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAG > SRR4302535.3668453/1‑94 (MQ=60)
GACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAG < SRR4302535.1842810/94‑1 (MQ=60)
ACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTTTTCCGCAACAGG > SRR4302535.2876442/1‑94 (MQ=60)
ACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGG < SRR4302535.4219830/94‑1 (MQ=60)
ACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGG > SRR4302535.548986/1‑94 (MQ=60)
CCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGC > SRR4302535.4416816/1‑94 (MQ=60)
CCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCCCTCCTGCCGAGACGCATATTCTTCCGCAACAGGC > SRR4302535.717873/1‑94 (MQ=60)
CCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCG > SRR4302535.972239/1‑94 (MQ=60)
CAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGA < SRR4302535.4401002/94‑1 (MQ=60)
TTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAC < SRR4302535.438594/94‑1 (MQ=60)
TTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAC < SRR4302535.2199126/94‑1 (MQ=60)
TTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATAC < SRR4302535.495972/94‑1 (MQ=60)
TTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACG < SRR4302535.2827154/94‑1 (MQ=60)
ATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGA > SRR4302535.1412551/1‑94 (MQ=60)
ATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGA > SRR4302535.4179081/1‑94 (MQ=60)
TGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGAT > SRR4302535.1142955/1‑94 (MQ=60)
AGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCC > SRR4302535.702857/1‑94 (MQ=60)
GCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCCTATTCTTCCGCAACAGGCGATACGCGATCAC > SRR4302535.3029285/1‑94 (MQ=60)
GACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTT > SRR4302535.2741499/1‑94 (MQ=60)
GACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTT < SRR4302535.1343886/94‑1 (MQ=60)
ACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTG > SRR4302535.292544/1‑94 (MQ=60)
ACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTG < SRR4302535.1222498/94‑1 (MQ=60)
CACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGT < SRR4302535.895626/94‑1 (MQ=60)
CACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGT < SRR4302535.1259347/94‑1 (MQ=60)
CACTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGT > SRR4302535.3637682/1‑94 (MQ=60)
CTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGC < SRR4302535.3051525/94‑1 (MQ=60)
CTACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGC > SRR4302535.462471/1‑94 (MQ=60)
TACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCT > SRR4302535.4003891/1‑94 (MQ=60)
TACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCT > SRR4302535.877756/1‑94 (MQ=60)
ACTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTCTGTGCTC > SRR4302535.2298971/1‑94 (MQ=60)
CTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCG > SRR4302535.2904814/1‑94 (MQ=60)
CTGTCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCG > SRR4302535.1836312/1‑94 (MQ=60)
TCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAT < SRR4302535.4295749/94‑1 (MQ=60)
TCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAT < SRR4302535.4291266/94‑1 (MQ=60)
TCACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAAT > SRR4302535.74108/1‑94 (MQ=60)
CACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGACTT > SRR4302535.93558/1‑94 (MQ=60)
ACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTT > SRR4302535.2433787/1‑94 (MQ=60)
ACATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTT < SRR4302535.786181/94‑1 (MQ=60)
CATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTC < SRR4302535.1621969/94‑1 (MQ=60)
CATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTC > SRR4302535.2102082/1‑94 (MQ=60)
ATGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCT < SRR4302535.2991714/94‑1 (MQ=60)
ATGAAAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCT < SRR4302535.3080997/94‑1 (MQ=60)
TGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTG < SRR4302535.1335184/94‑1 (MQ=60)
TGACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTG > SRR4302535.1176214/1‑94 (MQ=60)
GCAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGA < SRR4302535.783544/94‑1 (MQ=60)
ACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGtc > SRR4302535.4534334/1‑92 (MQ=60)
ACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGA > SRR4302535.4580796/1‑94 (MQ=60)
ACAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGA > SRR4302535.4697334/1‑94 (MQ=60)
CAAATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAA < SRR4302535.3184337/94‑1 (MQ=60)
CAAATCAGCCATGCTACAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAA < SRR4302535.2355193/94‑1 (MQ=60)
AATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATT < SRR4302535.3281215/94‑1 (MQ=60)
AATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATT > SRR4302535.1770256/1‑94 (MQ=60)
ATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTG < SRR4302535.2276171/94‑1 (MQ=60)
ATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTG > SRR4302535.2527901/1‑94 (MQ=60)
ATCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTG < SRR4302535.1860253/94‑1 (MQ=60)
TCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGA > SRR4302535.2106388/1‑94 (MQ=60)
TCAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGA < SRR4302535.776275/94‑1 (MQ=60)
CAGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAA < SRR4302535.351841/94‑1 (MQ=60)
AGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAA > SRR4302535.828483/1‑94 (MQ=60)
AGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAA < SRR4302535.3191885/94‑1 (MQ=60)
AGCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAA < SRR4302535.259066/94‑1 (MQ=60)
GCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAG > SRR4302535.3845242/1‑94 (MQ=60)
GCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAG < SRR4302535.3352622/94‑1 (MQ=60)
GCCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAG < SRR4302535.2690310/94‑1 (MQ=60)
CCATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCTCTTTGTGCTCGACTTTCTGGAATTGAAAGA > SRR4302535.4226290/1‑94 (MQ=60)
CATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAT < SRR4302535.3066009/94‑1 (MQ=60)
CATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGAT < SRR4302535.2314237/94‑1 (MQ=60)
ATGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATG > SRR4302535.1131884/1‑94 (MQ=60)
TGCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGA < SRR4302535.1405508/94‑1 (MQ=60)
GCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAA > SRR4302535.257454/1‑94 (MQ=60)
GCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAA < SRR4302535.3371057/94‑1 (MQ=60)
GCTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAA < SRR4302535.2496193/94‑1 (MQ=60)
CTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAAT < SRR4302535.4432525/94‑1 (MQ=60)
CTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAAT < SRR4302535.2133971/94‑1 (MQ=60)
CTGCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAAT < SRR4302535.27084/94‑1 (MQ=60)
GCAACAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATAT > SRR4302535.4027412/1‑94 (MQ=60)
CAACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAG > SRR4302535.820329/1‑94 (MQ=60)
AACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGA > SRR4302535.1364345/1‑94 (MQ=60)
AACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGA < SRR4302535.2494740/94‑1 (MQ=60)
ACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAA < SRR4302535.193464/94‑1 (MQ=60)
ACGCGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAA < SRR4302535.2235475/94‑1 (MQ=60)
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GCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAA > NC_000913/3365961‑3366145
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
