Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,367,240	T→C	Y249C (TAT→TGT)	yhcI ←	putative NAGC‑like transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,367,240	0	T	C	100.0%	1073.2 / NA	344	Y249C (TAT→TGT)	yhcI	putative NAGC‑like transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (161/183); total (161/183)

Only 100 of 348 total aligned reads displayed.

AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC  >  NC_000913/3367150‑3367330

aaaCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGacac                                                                                          >  1:5963316/1‑93 (MQ=255)

  aCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAccc                                                                                        <  2:4571804/93‑1 (MQ=255)

     tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc                                                                                     >  1:5831213/1‑93 (MQ=255)

     tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc                                                                                     <  2:6310636/93‑1 (MQ=255)

      gCATCATGGCGGTAATGTGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCt                                                                                    >  2:2498030/1‑93 (MQ=255)

      gCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCt                                                                                    <  2:2035071/93‑1 (MQ=255)

      gCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCt                                                                                    <  1:3005564/93‑1 (MQ=255)

         tcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGcc                                                                                 >  2:6481143/1‑93 (MQ=255)

         tcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGcc                                                                                 >  2:5799987/1‑93 (MQ=255)

          catGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCa                                                                                <  1:4917651/93‑1 (MQ=255)

           atGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAg                                                                               <  1:4262063/93‑1 (MQ=255)

            tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa                                                                              <  2:6762882/93‑1 (MQ=255)

            tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa                                                                              >  1:7903081/1‑93 (MQ=255)

               cGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACACTTCTGCCAGACCa                                                                           >  2:2744048/1‑93 (MQ=255)

                ggTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCaa                                                                          <  1:2946158/93‑1 (MQ=255)

                 gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc                                                                         <  2:732497/93‑1 (MQ=255)

                 gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc                                                                         <  1:6937499/93‑1 (MQ=255)

                 gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc                                                                         >  2:4476054/1‑93 (MQ=255)

                   aaTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGc                                                                       <  1:2235693/93‑1 (MQ=255)

                   aaTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGc                                                                       >  2:614137/1‑93 (MQ=255)

                    aTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCt                                                                      <  1:1905159/93‑1 (MQ=255)

                     tGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTg                                                                     >  2:7233367/1‑93 (MQ=255)

                      gcgcCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGc                                                                    >  1:1954882/1‑93 (MQ=255)

                      gcgcCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGc                                                                    <  2:6820482/93‑1 (MQ=255)

                      gcgcCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGc                                                                    >  2:3392362/1‑93 (MQ=255)

                       cgccgcCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGcc                                                                   <  1:7251987/93‑1 (MQ=255)

                         ccgccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCAc                                                                 <  2:1718629/93‑1 (MQ=255)

                            ccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGa                                                              <  2:3601744/93‑1 (MQ=255)

                                tAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccac                                                          >  2:587090/1‑93 (MQ=255)

                                tAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccac                                                          >  1:5865514/1‑93 (MQ=255)

                                 aaaTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccacc                                                         <  1:451418/93‑1 (MQ=255)

                                  aaTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAccacca                                                        <  2:2460500/93‑1 (MQ=255)

                                  aaTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAccacca                                                        <  1:3356900/93‑1 (MQ=255)

                                   aTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACcaccac                                                       <  1:521057/93‑1 (MQ=255)

                                   aTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACcaccac                                                       <  1:1629408/93‑1 (MQ=255)

                                   aTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACcaccac                                                       <  2:1367146/93‑1 (MQ=255)

                                    tCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACg                                                      >  1:1569913/1‑93 (MQ=255)

                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCCCCACGCa                                                    <  1:510888/93‑1 (MQ=255)

                                      aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa                                                    >  1:193397/1‑93 (MQ=255)

                                       aCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAc                                                   <  1:4615618/93‑1 (MQ=255)

                                         ctGAAATGCCGCTGGATCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                 >  2:5516163/2‑93 (MQ=255)

                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                 >  1:7642540/1‑93 (MQ=255)

                                         aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg                                                 <  1:7733734/93‑1 (MQ=255)

                                          tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg                                                >  1:4758302/1‑93 (MQ=255)

                                            aaaTGCCGCTGGGTCGTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCGGCCACCGACCACCACGCACTGGCa                                              <  1:6229861/93‑1 (MQ=255)

                                            aaaTGCCGCTGGCTCCTCCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCa                                              >  2:7350817/1‑93 (MQ=255)

                                             aaTGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCaa                                             <  1:6481144/93‑1 (MQ=255)

                                               tGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATc                                           <  1:1231887/93‑1 (MQ=255)

                                                gCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCa                                          >  1:1869674/1‑93 (MQ=255)

                                                gCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCa                                          <  1:1475021/93‑1 (MQ=255)

                                                gCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCa                                          <  2:7917780/93‑1 (MQ=255)

                                                   gCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGtt                                       >  1:5380473/1‑93 (MQ=255)

                                                    cTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtg                                      >  1:348549/1‑93 (MQ=255)

                                                    cTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtg                                      >  2:5120810/1‑93 (MQ=255)

                                                     tGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGgtgt                                     >  1:7102555/1‑93 (MQ=255)

                                                     tGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt                                     <  2:4094513/93‑1 (MQ=255)

                                                     tGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt                                     >  2:3774297/1‑93 (MQ=255)

                                                            tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa                              <  2:5757461/93‑1 (MQ=255)

                                                            tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa                              <  2:6928337/93‑1 (MQ=255)

                                                            tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa                              >  1:6530476/1‑93 (MQ=255)

                                                             gcgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTaa                             >  1:6814200/1‑93 (MQ=255)

                                                             gcgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTaa                             <  1:5590885/93‑1 (MQ=255)

                                                              cgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAat                            <  2:1351321/93‑1 (MQ=255)

                                                              cgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAat                            <  2:1611038/93‑1 (MQ=255)

                                                               gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata                           <  2:4683298/93‑1 (MQ=255)

                                                               gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata                           >  1:3214421/1‑93 (MQ=255)

                                                               gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata                           <  2:4238628/93‑1 (MQ=255)

                                                                ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat                          >  2:835682/1‑93 (MQ=255)

                                                                ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat                          >  1:3737353/1‑93 (MQ=255)

                                                                ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat                          >  1:3990452/1‑93 (MQ=255)

                                                                ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat                          <  2:1853736/93‑1 (MQ=255)

                                                                ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat                          <  2:700368/93‑1 (MQ=255)

                                                                ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat                          <  2:3644809/93‑1 (MQ=255)

                                                                  aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa                        >  2:349944/1‑93 (MQ=255)

                                                                  aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa                        <  2:7642141/93‑1 (MQ=255)

                                                                  aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa                        <  1:3449309/93‑1 (MQ=255)

                                                                  aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa                        <  1:747432/93‑1 (MQ=255)

                                                                   gATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAg                       <  2:2315578/93‑1 (MQ=255)

                                                                   gATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAg                       >  2:2936356/1‑93 (MQ=255)

                                                                   gATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAg                       >  1:2073514/1‑93 (MQ=255)

                                                                    aTACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGc                      >  2:761529/1‑93 (MQ=255)

                                                                      aCGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGa                    <  1:1007576/93‑1 (MQ=255)

                                                                       cGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGAt                   <  1:601666/93‑1 (MQ=255)

                                                                       cGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGAt                   >  2:537161/1‑93 (MQ=255)

                                                                        gTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATc                  >  2:4987189/1‑93 (MQ=255)

                                                                         tttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCa                 <  1:7138965/93‑1 (MQ=255)

                                                                         tttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCa                 >  2:3911900/1‑93 (MQ=255)

                                                                          ttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAg                >  1:925424/1‑93 (MQ=255)

                                                                           tCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGc               <  1:6701539/93‑1 (MQ=255)

                                                                           tCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGc               <  1:2818807/93‑1 (MQ=255)

                                                                           tCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGc               <  1:1696951/93‑1 (MQ=255)

                                                                            ccaccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGcc              >  2:3071725/1‑93 (MQ=255)

                                                                             caccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCt             <  2:4460234/93‑1 (MQ=255)

                                                                              cccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCtt            <  1:2713862/92‑1 (MQ=255)

                                                                                   cgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAg       <  2:5169738/93‑1 (MQ=255)

                                                                                   cgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAg       <  2:1207531/93‑1 (MQ=255)

                                                                                     ccAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCg     >  2:6412775/1‑93 (MQ=255)

                                                                                       aGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTa   >  1:6133271/1‑93 (MQ=255)

                                                                                       aGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTa   >  1:1153063/1‑93 (MQ=255)

                                                                                       aGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGAGATCAGCCTTGCAAGCGTa   >  2:1227549/1‑93 (MQ=255)

AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC  >  NC_000913/3367150‑3367330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG  >  NC_000913/3367147‑3367333

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGAC                                                                                               <  SRR4302543.5100234/94‑1 (MQ=60)

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGAC                                                                                               <  SRR4302543.2579715/94‑1 (MQ=60)

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGAC                                                                                               <  SRR4302543.1852143/94‑1 (MQ=60)

 GTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACA                                                                                              >  SRR4302543.2480095/1‑94 (MQ=60)

 GTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACA                                                                                              <  SRR4302543.6681363/94‑1 (MQ=60)

 GTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACA                                                                                              <  SRR4302543.6472461/94‑1 (MQ=60)

  TAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAC                                                                                             >  SRR4302543.6017921/1‑94 (MQ=60)

  TAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACAC                                                                                             >  SRR4302543.6017922/1‑94 (MQ=60)

   AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACC                                                                                            <  SRR4302543.341999/94‑1 (MQ=60)

     ACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCT                                                                                          <  SRR4302543.3503532/94‑1 (MQ=60)

     ACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCT                                                                                          <  SRR4302543.2833180/94‑1 (MQ=60)

     ACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCT                                                                                          <  SRR4302543.7367095/94‑1 (MQ=60)

      CCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTT                                                                                         <  SRR4302543.1804221/94‑1 (MQ=60)

       CTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTC                                                                                        >  SRR4302543.5718695/1‑94 (MQ=60)

       CTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTC                                                                                        >  SRR4302543.5884249/1‑94 (MQ=60)

        TGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCT                                                                                       <  SRR4302543.1496994/94‑1 (MQ=60)

        TGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCT                                                                                       <  SRR4302543.1124702/94‑1 (MQ=60)

         GCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTG                                                                                      <  SRR4302543.3032796/94‑1 (MQ=60)

         GCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTG                                                                                      <  SRR4302543.7475627/94‑1 (MQ=60)

          CATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGC                                                                                     >  SRR4302543.3115534/1‑94 (MQ=60)

           ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC                                                                                    >  SRR4302543.6058369/1‑94 (MQ=60)

           ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC                                                                                    <  SRR4302543.7203610/94‑1 (MQ=60)

           ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC                                                                                    >  SRR4302543.7210532/1‑94 (MQ=60)

             CATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAG                                                                                  <  SRR4302543.4962456/94‑1 (MQ=60)

              ATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGA                                                                                 <  SRR4302543.7181671/94‑1 (MQ=60)

              ATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGA                                                                                 >  SRR4302543.7977358/1‑94 (MQ=60)

              ATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGA                                                                                 <  SRR4302543.4300772/94‑1 (MQ=60)

               TGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGAC                                                                                >  SRR4302543.7710342/1‑94 (MQ=60)

                GGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACC                                                                               >  SRR4302543.7397127/1‑94 (MQ=60)

                GGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACC                                                                               >  SRR4302543.6460085/1‑94 (MQ=60)

                GGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACC                                                                               >  SRR4302543.4131650/1‑94 (MQ=60)

                  CGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAA                                                                             >  SRR4302543.835952/1‑94 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                            <  SRR4302543.6783701/94‑1 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                            <  SRR4302543.2972902/94‑1 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                            >  SRR4302543.1950834/1‑94 (MQ=60)

                   GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC                                                                            <  SRR4302543.1904589/94‑1 (MQ=60)

                    GTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACG                                                                           <  SRR4302543.7002755/94‑1 (MQ=60)

                    GTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACG                                                                           >  SRR4302543.1696410/1‑94 (MQ=60)

                    GTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACG                                                                           <  SRR4302543.4287148/94‑1 (MQ=60)

                     TAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACTAGCGCCAGACACCCTTCTGCCAGACCAACGC                                                                          >  SRR4302543.6137031/1‑94 (MQ=60)

                     TAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGC                                                                          >  SRR4302543.1957428/1‑94 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                         <  SRR4302543.2928410/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                         >  SRR4302543.6256613/1‑94 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                         >  SRR4302543.2475893/1‑94 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                         <  SRR4302543.2255917/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                         <  SRR4302543.2131575/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                         <  SRR4302543.5898756/94‑1 (MQ=60)

                      AATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCT                                                                         <  SRR4302543.6675505/94‑1 (MQ=60)

                       aacgagccccccgaaaacaacattaaacgcgcaacGCTCCTGCCCCAGATACGTTTCCGCCAGCGCCAGAAACCCTTCTGCCAGACCAACGCTG                                                                        <  SRR4302543.1922310/59‑1 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                        <  SRR4302543.1922311/94‑1 (MQ=60)

                       ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG                                                                        >  SRR4302543.1195897/1‑94 (MQ=60)

                        TGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGC                                                                       >  SRR4302543.1972415/1‑94 (MQ=60)

                          CGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCA                                                                     <  SRR4302543.7322114/94‑1 (MQ=60)

                            CCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACC                                                                   <  SRR4302543.1629107/94‑1 (MQ=60)

                            CCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACC                                                                   >  SRR4302543.3342996/1‑94 (MQ=60)

                             CGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCG                                                                  >  SRR4302543.2988746/1‑94 (MQ=60)

                             CGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCG                                                                  >  SRR4302543.355003/1‑94 (MQ=60)

                               CCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAC                                                                >  SRR4302543.5511757/1‑94 (MQ=60)

                                CAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACC                                                               >  SRR4302543.6003483/1‑94 (MQ=60)

                                  GTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCAC                                                             >  SRR4302543.5918910/1‑94 (MQ=60)

                                  GTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCAC                                                             >  SRR4302543.5918909/1‑94 (MQ=60)

                                  GTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCAC                                                             >  SRR4302543.7096946/1‑94 (MQ=60)

                                   TAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACC                                                            >  SRR4302543.7726711/1‑94 (MQ=60)

                                    AAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACGAACGCTGCCACCGACCACCA                                                           >  SRR4302543.6216253/1‑94 (MQ=60)

                                    AAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCA                                                           <  SRR4302543.455632/94‑1 (MQ=60)

                                    AAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCA                                                           >  SRR4302543.6514104/1‑94 (MQ=60)

                                    AAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCA                                                           >  SRR4302543.7001425/1‑94 (MQ=60)

                                    AAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCA                                                           >  SRR4302543.7213200/1‑94 (MQ=60)

                                     AATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC                                                          <  SRR4302543.4107097/94‑1 (MQ=60)

                                     AATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC                                                          <  SRR4302543.6808879/94‑1 (MQ=60)

                                     AATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC                                                          >  SRR4302543.1681394/1‑94 (MQ=60)

                                     AATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC                                                          <  SRR4302543.1579277/94‑1 (MQ=60)

                                     AATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC                                                          <  SRR4302543.3387105/94‑1 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACG                                                         <  SRR4302543.1643925/94‑1 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACG                                                         <  SRR4302543.525893/94‑1 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACG                                                         >  SRR4302543.1810578/1‑94 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACG                                                         >  SRR4302543.1583929/1‑94 (MQ=60)

                                      ATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACG                                                         <  SRR4302543.5144309/94‑1 (MQ=60)

                                        CAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCA                                                       >  SRR4302543.779682/1‑94 (MQ=60)

                                        CAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCA                                                       <  SRR4302543.4946673/94‑1 (MQ=60)

                                        CAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCA                                                       >  SRR4302543.195031/1‑94 (MQ=60)

                                        CAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCA                                                       >  SRR4302543.195032/1‑94 (MQ=60)

                                        CAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGCTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCA                                                       >  SRR4302543.4624802/1‑94 (MQ=60)

                                         AACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCCCCACGCAC                                                      <  SRR4302543.515639/94‑1 (MQ=60)

                                         AACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAC                                                      >  SRR4302543.6007706/1‑94 (MQ=60)

                                         AACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAC                                                      <  SRR4302543.674060/94‑1 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                     <  SRR4302543.3473394/94‑1 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                     <  SRR4302543.4657545/94‑1 (MQ=60)

                                          ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT                                                     >  SRR4302543.2971504/1‑94 (MQ=60)

                                           CATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTG                                                    >  SRR4302543.7715024/1‑94 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                   <  SRR4302543.7806815/94‑1 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                   >  SRR4302543.459935/1‑94 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                   <  SRR4302543.7795448/94‑1 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                   <  SRR4302543.6188243/94‑1 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                   >  SRR4302543.4801781/1‑94 (MQ=60)

                                            ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG                                                   >  SRR4302543.1339887/1‑94 (MQ=60)

                                             TGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGC                                                  <  SRR4302543.1818623/94‑1 (MQ=60)

                                             TGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGC                                                  <  SRR4302543.2598308/94‑1 (MQ=60)

                                               AAATGCCGCTGGGTCGTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCGGCCACCGACCACCACGCACTGGCAA                                                <  SRR4302543.6288663/94‑1 (MQ=60)

                                               AAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAA                                                >  SRR4302543.1206496/1‑94 (MQ=60)

                                                AATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAT                                               <  SRR4302543.6542206/94‑1 (MQ=60)

                                                 ATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATC                                              >  SRR4302543.5143554/1‑94 (MQ=60)

                                                 ATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATC                                              >  SRR4302543.6583862/1‑94 (MQ=60)

                                                  TGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCA                                             <  SRR4302543.1242980/94‑1 (MQ=60)

                                                  TGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCA                                             >  SRR4302543.1886472/1‑94 (MQ=60)

                                                   GCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAG                                            <  SRR4302543.6576608/94‑1 (MQ=60)

                                                   GCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAG                                            <  SRR4302543.1488310/94‑1 (MQ=60)

                                                   GCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAG                                            >  SRR4302543.3028054/1‑94 (MQ=60)

                                                    CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT                                           >  SRR4302543.804233/1‑94 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                          <  SRR4302543.221860/94‑1 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                          >  SRR4302543.468294/1‑94 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                          >  SRR4302543.3486121/1‑94 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                          >  SRR4302543.377538/1‑94 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                          >  SRR4302543.5429275/1‑94 (MQ=60)

                                                     CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT                                          >  SRR4302543.321160/1‑94 (MQ=60)

                                                      GCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTG                                         >  SRR4302543.351771/1‑94 (MQ=60)

                                                      GCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTG                                         <  SRR4302543.4303436/94‑1 (MQ=60)

                                                       CTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGT                                        >  SRR4302543.7190908/1‑94 (MQ=60)

                                                       CTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGGTGT                                        >  SRR4302543.7171541/1‑94 (MQ=60)

                                                        TGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTG                                       <  SRR4302543.5617154/94‑1 (MQ=60)

                                                         GGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGG                                      <  SRR4302543.840091/94‑1 (MQ=60)

                                                         GGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGG                                      <  SRR4302543.163343/94‑1 (MQ=60)

                                                         GGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTACTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGG                                      <  SRR4302543.7817461/94‑1 (MQ=60)

                                                           CTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCT                                    <  SRR4302543.5196217/94‑1 (MQ=60)

                                                           CTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCT                                    >  SRR4302543.3904961/1‑94 (MQ=60)

                                                             CCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTT                                  <  SRR4302543.2040030/94‑1 (MQ=60)

                                                             CCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTT                                  >  SRR4302543.1638974/1‑94 (MQ=60)

                                                              CTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTA                                 >  SRR4302543.6660251/1‑94 (MQ=60)

                                                              CTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTA                                 >  SRR4302543.6398570/1‑94 (MQ=60)

                                                              CTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTA                                 >  SRR4302543.6881600/1‑94 (MQ=60)

                                                              CTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTA                                 >  SRR4302543.3372532/1‑94 (MQ=60)

                                                              CTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTA                                 >  SRR4302543.6591962/1‑94 (MQ=60)

                                                               TGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAA                                >  SRR4302543.6878531/1‑94 (MQ=60)

                                                                GCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAAT                               <  SRR4302543.5641815/94‑1 (MQ=60)

                                                                GCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAAT                               <  SRR4302543.5741486/94‑1 (MQ=60)

                                                                 CGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATA                              >  SRR4302543.3243453/1‑94 (MQ=60)

                                                                 CGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATA                              <  SRR4302543.2895717/94‑1 (MQ=60)

                                                                  GCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATAT                             <  SRR4302543.5880149/94‑1 (MQ=60)

                                                                  GCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATAT                             >  SRR4302543.3770228/1‑94 (MQ=60)

                                                                  GCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATAT                             >  SRR4302543.4025937/1‑94 (MQ=60)

                                                                  GCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATAT                             <  SRR4302543.1949248/94‑1 (MQ=60)

                                                                   CCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATC                            <  SRR4302543.6990263/94‑1 (MQ=60)

                                                                    CAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCA                           <  SRR4302543.4584533/94‑1 (MQ=60)

                                                                     CGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                          <  SRR4302543.2007691/94‑1 (MQ=60)

                                                                     AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                          <  SRR4302543.3480200/94‑1 (MQ=60)

                                                                     AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                          >  SRR4302543.2092039/1‑94 (MQ=60)

                                                                     AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                          <  SRR4302543.7547358/94‑1 (MQ=60)

                                                                     AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG                          <  SRR4302543.754075/94‑1 (MQ=60)

                                                                      GATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGC                         >  SRR4302543.1985206/1‑94 (MQ=60)

                                                                       ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG                        <  SRR4302543.126656/94‑1 (MQ=60)

                                                                       ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG                        <  SRR4302543.5244858/94‑1 (MQ=60)

                                                                       ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG                        >  SRR4302543.5129465/1‑94 (MQ=60)

                                                                         ACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGAT                      >  SRR4302543.1094650/1‑94 (MQ=60)

                                                                         ACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGAT                      <  SRR4302543.1016489/94‑1 (MQ=60)

                                                                         ACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGAT                      <  SRR4302543.5422326/94‑1 (MQ=60)

                                                                          CGTTTCCCCCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATC                     <  SRR4302543.2325527/94‑1 (MQ=60)

                                                                          CGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATC                     <  SRR4302543.607175/94‑1 (MQ=60)

                                                                           GTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCA                    <  SRR4302543.5922449/94‑1 (MQ=60)

                                                                            TTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAG                   >  SRR4302543.933516/1‑94 (MQ=60)

                                                                            TTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAG                   <  SRR4302543.7208332/94‑1 (MQ=60)

                                                                            TTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAG                   <  SRR4302543.7827125/94‑1 (MQ=60)

                                                                             TTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGC                  <  SRR4302543.3445891/94‑1 (MQ=60)

                                                                              TCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCC                 <  SRR4302543.1954358/94‑1 (MQ=60)

                                                                              TCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCC                 <  SRR4302543.1712169/94‑1 (MQ=60)

                                                                              TCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCC                 <  SRR4302543.2844609/94‑1 (MQ=60)

                                                                              TCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCC                 <  SRR4302543.3190385/94‑1 (MQ=60)

                                                                              TCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCC                 <  SRR4302543.6764785/94‑1 (MQ=60)

                                                                               CCACCAGCGCCAGACACCCTTCTGCCAGAACAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCT                >  SRR4302543.4475056/1‑94 (MQ=60)

                                                                                CACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTT               <  SRR4302543.7058233/94‑1 (MQ=60)

                                                                                 CCCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTG              <  SRR4302543.2738522/94‑1 (MQ=60)

                                                                                 ACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTG              <  SRR4302543.4806311/94‑1 (MQ=60)

                                                                                     GCGCCAGACCCCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAG          <  SRR4302543.3600498/94‑1 (MQ=60)

                                                                                      CGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGC         <  SRR4302543.5407490/94‑1 (MQ=60)

                                                                                       GCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCG        <  SRR4302543.5423977/94‑1 (MQ=60)

                                                                                       GCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCG        <  SRR4302543.1265639/94‑1 (MQ=60)

                                                                                        CCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCGCTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGC       >  SRR4302543.188817/1‑94 (MQ=60)

                                                                                        CCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGT       >  SRR4302543.4796002/1‑94 (MQ=60)

                                                                                         CAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA      >  SRR4302543.1163566/1‑94 (MQ=60)

                                                                                         CAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA      >  SRR4302543.6191364/1‑94 (MQ=60)

                                                                                         CAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGC‑TTAATATCAGCGATCAGCCTTGCAAGCGTAC     >  SRR4302543.2828099/1‑94 (MQ=60)

                                                                                          AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC     <  SRR4302543.357848/94‑1 (MQ=60)

                                                                                          AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC     <  SRR4302543.6165995/94‑1 (MQ=60)

                                                                                          AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC     >  SRR4302543.6948170/1‑94 (MQ=60)

                                                                                            ACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGT   <  SRR4302543.3429601/94‑1 (MQ=60)

                                                                                             CACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG  >  SRR4302543.4654201/1‑94 (MQ=60)

                                                                                             CACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG  >  SRR4302543.4829644/1‑94 (MQ=60)

                                                                                             CACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG  <  SRR4302543.4849889/94‑1 (MQ=60)

AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG  >  NC_000913/3367147‑3367333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`