Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,367,240 |
T→C |
Y249C (TAT→TGT) |
yhcI ← |
putative NAGC‑like transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,367,240 | 0 | T | C | 99.5%
| 606.4
/ NA
| 195 | Y249C (TAT→TGT) | yhcI | putative NAGC‑like transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (82/112); minor base A (1/0); total (83/112) |
| Fisher's exact test for biased strand distribution p-value = 4.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 201 total aligned reads displayed.
AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA > NC_000913/3367150‑3367329
|
aaaCCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGacac < 1:4398560/93‑1 (MQ=255)
ccTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCt < 1:2535206/93‑1 (MQ=255)
cTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCtt > 2:1176463/1‑93 (MQ=255)
tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCGACCAGCGCCAGACACCCTTc > 2:2775989/1‑93 (MQ=255)
tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc > 1:3695524/1‑93 (MQ=255)
tGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc < 2:797178/93‑1 (MQ=255)
tGCATCAGGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTc < 2:1124222/93‑1 (MQ=255)
gCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCt > 2:4652459/1‑93 (MQ=255)
catcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTg < 1:3629829/93‑1 (MQ=255)
catcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTg > 1:2393523/1‑93 (MQ=255)
tcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGcc < 1:1019443/93‑1 (MQ=255)
tcatGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGcc < 2:1097983/93‑1 (MQ=255)
atGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAg > 2:1801469/1‑93 (MQ=255)
tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa < 1:2130111/93‑1 (MQ=255)
tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa > 2:2862386/1‑93 (MQ=255)
tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa < 2:4498637/93‑1 (MQ=255)
tGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGa > 1:4254938/1‑93 (MQ=255)
ggTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCaa < 1:2371731/93‑1 (MQ=255)
gTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAc > 2:1782568/1‑93 (MQ=255)
aaTGCGCAGCCAGTAAATCCACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACTAACGc > 2:4585984/1‑93 (MQ=255)
aTGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCt < 1:4146769/93‑1 (MQ=255)
tGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTg > 1:1186919/1‑93 (MQ=255)
ccgccAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCAc < 1:193603/93‑1 (MQ=255)
cAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGac < 2:85309/93‑1 (MQ=255)
cAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGac > 1:3541129/1‑93 (MQ=255)
cAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGac > 1:2074295/1‑93 (MQ=255)
aGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacc < 1:1496810/93‑1 (MQ=255)
gTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacca < 2:66324/93‑1 (MQ=255)
gTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGacca < 1:1940964/93‑1 (MQ=255)
tAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccac > 1:2900614/1‑93 (MQ=255)
tAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGaccac < 2:1375642/93‑1 (MQ=255)
aaTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAccacca > 2:4045925/1‑93 (MQ=255)
aaTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAccacca > 2:1868306/1‑93 (MQ=255)
aTCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACcaccac < 2:1698328/93‑1 (MQ=255)
tCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACg > 2:2642317/1‑93 (MQ=255)
tCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACg > 2:3639626/1‑93 (MQ=255)
aaCATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCa > 2:3136050/1‑93 (MQ=255)
cATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAcg > 1:2810070/1‑92 (MQ=255)
cATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACt > 1:847794/1‑93 (MQ=255)
aTGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTg < 1:4467896/93‑1 (MQ=255)
tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg > 2:3388219/1‑93 (MQ=255)
tGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTgg < 1:755664/93‑1 (MQ=255)
gAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGc < 1:2776741/93‑1 (MQ=255)
gAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGc < 2:1241188/93‑1 (MQ=255)
aaaTGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCa < 2:3203555/93‑1 (MQ=255)
aaaTGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCa > 2:4251139/1‑93 (MQ=255)
aaTGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCaa < 2:2171470/93‑1 (MQ=255)
aTGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGTGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAt < 2:1991804/93‑1 (MQ=255)
tGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATc < 2:2440535/93‑1 (MQ=255)
gCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCa < 1:146377/93‑1 (MQ=255)
cctcTGGCTCATGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAg < 2:3751281/90‑1 (MQ=255)
cGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGt < 1:497391/93‑1 (MQ=255)
cGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGt < 2:2076052/93‑1 (MQ=255)
cGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGt > 2:3833832/1‑93 (MQ=255)
cGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGt < 2:2590979/93‑1 (MQ=255)
gCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGtt > 1:1782064/1‑93 (MQ=255)
gCTGGCTCCTGCGCCAGATACGTTGCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGtt < 2:2287354/93‑1 (MQ=255)
cTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtg < 2:2788446/93‑1 (MQ=255)
cTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtg < 1:3977918/93‑1 (MQ=255)
tGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt < 2:536101/93‑1 (MQ=255)
tGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt < 1:3783630/93‑1 (MQ=255)
gggCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgt < 1:1639580/92‑1 (MQ=255)
ggCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgtg < 1:3064577/93‑1 (MQ=255)
ggCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgtg < 2:3576097/93‑1 (MQ=255)
ggCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTtgtg < 1:2757537/93‑1 (MQ=255)
cTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACGAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGc < 1:3306470/93‑1 (MQ=255)
cTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGc < 2:4159016/93‑1 (MQ=255)
cTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGc < 1:469907/93‑1 (MQ=255)
tCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCt > 1:3329318/1‑93 (MQ=255)
ccTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCtt < 2:3552476/93‑1 (MQ=255)
cTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCttt < 2:4390747/93‑1 (MQ=255)
cTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCttt > 2:2738855/1‑93 (MQ=255)
tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa > 1:873310/1‑93 (MQ=255)
tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa < 1:4575326/93‑1 (MQ=255)
tGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTa < 1:1831989/93‑1 (MQ=255)
gcgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTaa < 1:3737325/93‑1 (MQ=255)
cgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAat < 1:3443924/93‑1 (MQ=255)
cgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAat > 1:3452566/1‑93 (MQ=255)
cgcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAat < 1:3840227/93‑1 (MQ=255)
gcCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAata < 2:754572/93‑1 (MQ=255)
ccAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAatat < 1:3378246/93‑1 (MQ=255)
aGATACGTTTCCACCAGCGCCAGACCCCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa < 2:2520995/93‑1 (MQ=255)
aGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCa < 2:2190011/93‑1 (MQ=255)
gATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAg > 1:271003/1‑93 (MQ=255)
aTACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGc < 2:3002500/93‑1 (MQ=255)
aTACGTTTCCACCAGCGCCAAAAACCCTTCTGCCAGACCAACACTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGGTTTAATATCAGc > 2:3937594/1‑93 (MQ=255)
tACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCg > 1:102787/1‑93 (MQ=255)
tACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCg > 1:1298995/1‑93 (MQ=255)
tACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCg > 1:35838/1‑93 (MQ=255)
gTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGAta > 2:1549802/1‑92 (MQ=255)
gTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATc > 2:3817872/1‑93 (MQ=255)
ttCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAg < 2:3675072/93‑1 (MQ=255)
ccaccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGcc < 2:1748661/93‑1 (MQ=255)
caccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCt > 1:3234366/1‑93 (MQ=255)
caccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCt > 2:2441653/1‑93 (MQ=255)
cccaGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCtt < 1:2793971/92‑1 (MQ=255)
cgcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAg < 1:2467511/93‑1 (MQ=255)
gcCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGc < 1:2003055/93‑1 (MQ=255)
ccAGACCCCCTTCGTCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCg < 2:424771/93‑1 (MQ=255)
aGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTa < 1:3473812/93‑1 (MQ=255)
|
AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTA > NC_000913/3367150‑3367329
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG > NC_000913/3367147‑3367333
|
AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGAC < SRR4302535.4229165/94‑1 (MQ=60)
GTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACA > SRR4302535.2773584/1‑94 (MQ=60)
AAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACC < SRR4302535.4428666/94‑1 (MQ=60)
ACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATAAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCT < SRR4302535.3496768/94‑1 (MQ=60)
CCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTT < SRR4302535.2553466/94‑1 (MQ=60)
CTGCATCATGGCGGTAATGGGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTC < SRR4302535.1893644/94‑1 (MQ=60)
CTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTC > SRR4302535.3721103/1‑94 (MQ=60)
TGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCT > SRR4302535.4313279/1‑94 (MQ=60)
GCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTG < SRR4302535.2863024/94‑1 (MQ=60)
GCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTG > SRR4302535.2410728/1‑94 (MQ=60)
CATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGC < SRR4302535.3654988/94‑1 (MQ=60)
ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACCCCCTTCTGCC < SRR4302535.3581180/94‑1 (MQ=60)
ATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCC > SRR4302535.1188347/1‑94 (MQ=60)
TCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCA < SRR4302535.1026683/94‑1 (MQ=60)
ATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGA > SRR4302535.4284087/1‑94 (MQ=60)
TGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGAC < SRR4302535.2145467/94‑1 (MQ=60)
CGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAA > SRR4302535.305458/1‑94 (MQ=60)
GGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAAC < SRR4302535.2388762/94‑1 (MQ=60)
ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG > SRR4302535.1195401/1‑94 (MQ=60)
ATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTG < SRR4302535.4175164/94‑1 (MQ=60)
CCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACC < SRR4302535.194939/94‑1 (MQ=60)
CCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAC > SRR4302535.1837924/1‑94 (MQ=60)
CCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAC > SRR4302535.3565735/1‑94 (MQ=60)
CCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAC > SRR4302535.3475628/1‑94 (MQ=60)
CCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGAC > SRR4302535.2089236/1‑94 (MQ=60)
CAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACC > SRR4302535.3503788/1‑94 (MQ=60)
CAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACC > SRR4302535.3120461/1‑94 (MQ=60)
CAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACC > SRR4302535.4133844/1‑94 (MQ=60)
CAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACC > SRR4302535.1959111/1‑94 (MQ=60)
AGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCA < SRR4302535.1507574/94‑1 (MQ=60)
GTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCAC < SRR4302535.1954948/94‑1 (MQ=60)
GTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCAC > SRR4302535.2921117/1‑94 (MQ=60)
TAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACC > SRR4302535.84772/1‑94 (MQ=60)
AATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC < SRR4302535.1536277/94‑1 (MQ=60)
AATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC < SRR4302535.1954760/94‑1 (MQ=60)
AATAAACATGAAATGCCGCTGGCTCCGTCGCCAGATACGTTTCCACCAGCACCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCAC < SRR4302535.3329834/94‑1 (MQ=60)
AACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCAC > SRR4302535.482545/1‑94 (MQ=60)
ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT > SRR4302535.853755/1‑94 (MQ=60)
ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACT > SRR4302535.2133149/1‑94 (MQ=60)
ACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACG > SRR4302535.2830047/1‑94 (MQ=60)
ATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGG < SRR4302535.4498551/94‑1 (MQ=60)
TGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGC < SRR4302535.760986/94‑1 (MQ=60)
GAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCA < SRR4302535.2796509/94‑1 (MQ=60)
GAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCA < SRR4302535.3275539/94‑1 (MQ=60)
AAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAA > SRR4302535.446601/1‑94 (MQ=60)
AATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAT > SRR4302535.2804624/1‑94 (MQ=60)
AATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAAT < SRR4302535.457624/94‑1 (MQ=60)
TGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCA < SRR4302535.2503682/94‑1 (MQ=60)
GCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAG < SRR4302535.147396/94‑1 (MQ=60)
CCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGT > SRR4302535.3706871/1‑94 (MQ=60)
CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT > SRR4302535.1794960/1‑94 (MQ=60)
CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT < SRR4302535.500881/94‑1 (MQ=60)
CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT < SRR4302535.2767169/94‑1 (MQ=60)
CGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTT < SRR4302535.2817258/94‑1 (MQ=60)
GCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTG < SRR4302535.2084883/94‑1 (MQ=60)
CTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGT > SRR4302535.422290/1‑94 (MQ=60)
CTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGT < SRR4302535.3807087/94‑1 (MQ=60)
CTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGT < SRR4302535.4005098/94‑1 (MQ=60)
TGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTG < SRR4302535.3857909/94‑1 (MQ=60)
TGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTG < SRR4302535.3809737/94‑1 (MQ=60)
GGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTG < SRR4302535.1651433/94‑1 (MQ=60)
GGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGG < SRR4302535.3085997/94‑1 (MQ=60)
GGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGG < SRR4302535.2777186/94‑1 (MQ=60)
GCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACCCCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACGGGCAATCAGTTGTGGC < SRR4302535.510430/94‑1 (MQ=60)
CTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACGAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCT < SRR4302535.3329478/94‑1 (MQ=60)
CTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCT > SRR4302535.3352480/1‑94 (MQ=60)
CTCCTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCT < SRR4302535.473193/94‑1 (MQ=60)
CTGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTA > SRR4302535.879500/1‑94 (MQ=60)
TGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAA < SRR4302535.1845207/94‑1 (MQ=60)
TGCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAA < SRR4302535.4606506/94‑1 (MQ=60)
GCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAAT > SRR4302535.3476563/1‑94 (MQ=60)
GCGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAAT < SRR4302535.3763190/94‑1 (MQ=60)
CGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATA < SRR4302535.3467873/94‑1 (MQ=60)
CGCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATA < SRR4302535.3866691/94‑1 (MQ=60)
GCCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATAT < SRR4302535.1034956/94‑1 (MQ=60)
CCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATC < SRR4302535.3401735/94‑1 (MQ=60)
CCAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATC < SRR4302535.1476726/94‑1 (MQ=60)
CAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCA > SRR4302535.1412404/1‑94 (MQ=60)
CAGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCA < SRR4302535.2786754/94‑1 (MQ=60)
AGATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAG > SRR4302535.272890/1‑94 (MQ=60)
CATACGTTTCCACCAGCGCCAGACCCCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGC < SRR4302535.246982/94‑1 (MQ=60)
ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG > SRR4302535.36114/1‑94 (MQ=60)
ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG > SRR4302535.1308258/1‑94 (MQ=60)
ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG < SRR4302535.1210325/94‑1 (MQ=60)
ATACGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCG > SRR4302535.103515/1‑94 (MQ=60)
CGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATC > SRR4302535.3421834/1‑94 (MQ=60)
CGTTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATC > SRR4302535.2674884/1‑94 (MQ=60)
TTTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAG < SRR4302535.2394135/94‑1 (MQ=60)
TTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGC < SRR4302535.856133/94‑1 (MQ=60)
TTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGC < SRR4302535.3399358/94‑1 (MQ=60)
TTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGC < SRR4302535.4669821/94‑1 (MQ=60)
TTCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGC > SRR4302535.1661248/1‑94 (MQ=60)
TCCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCGCGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCC < SRR4302535.3740963/94‑1 (MQ=60)
CCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCT < SRR4302535.3921882/94‑1 (MQ=60)
CCACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCT > SRR4302535.3256809/1‑94 (MQ=60)
CCCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTG < SRR4302535.2813850/94‑1 (MQ=60)
ACCAGCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTG > SRR4302535.219778/1‑94 (MQ=60)
GCGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAG < SRR4302535.3616173/94‑1 (MQ=60)
CGCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGC < SRR4302535.2485299/94‑1 (MQ=60)
GCCAGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCG < SRR4302535.2017488/94‑1 (MQ=60)
AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC > SRR4302535.2187136/1‑94 (MQ=60)
AGACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTAC < SRR4302535.3497948/94‑1 (MQ=60)
ACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGT > SRR4302535.479103/1‑94 (MQ=60)
ACACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGT < SRR4302535.2492262/94‑1 (MQ=60)
CACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG < SRR4302535.3450298/94‑1 (MQ=60)
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AGTAAACCTGCATCATGGCGGTAATGCGCCGCCAGTAAATCAACATGAAATGCCGCTGGCTCCTGCGCCAGATACGTTTCCACCAGCGCCAGATACCCTTCTGCCAGACCAACGCTGCCACCGACCACCACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTG > NC_000913/3367147‑3367333
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
