Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,665,586 |
T→C |
A411A (GCA→GCG) |
yhjA ← |
putative cytochrome C peroxidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,665,586 | 0 | T | C | 100.0%
| 538.0
/ NA
| 171 | A411A (GCA→GCG) | yhjA | putative cytochrome C peroxidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/80); total (91/80) |
Only 100 of 173 total aligned reads displayed.
TCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC > NC_000913/3665497‑3665675
|
tcctGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGcc > 1:3545573/1‑93 (MQ=255)
tcctGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGcc < 2:2039396/93‑1 (MQ=255)
ctGCGGCAGCTCTTTGCCTACCTGATAGCGAAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGt < 1:1763676/93‑1 (MQ=255)
gCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTa > 2:2708371/1‑93 (MQ=255)
gCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAg > 1:2825544/1‑93 (MQ=255)
cAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGc < 1:1093403/93‑1 (MQ=255)
aGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCa > 1:3987458/1‑93 (MQ=255)
gCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTCAAGCaa > 2:1288460/1‑93 (MQ=255)
gCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCaa < 1:46093/93‑1 (MQ=255)
gCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCaa > 2:3483643/1‑93 (MQ=255)
gCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCaa > 2:3111957/1‑93 (MQ=255)
ctctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAc > 1:2600611/1‑93 (MQ=255)
tctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACg > 2:1772785/1‑93 (MQ=255)
ctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGt < 1:125603/93‑1 (MQ=255)
ctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGt < 2:3272430/93‑1 (MQ=255)
ctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGt < 1:241324/93‑1 (MQ=255)
ctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGt > 1:1501911/1‑93 (MQ=255)
tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGtt > 1:4451781/1‑93 (MQ=255)
tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGtt < 2:45278/93‑1 (MQ=255)
tGCCTACCTGATAGCGCAGCATCAGTTTCCCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTAc < 2:2496786/93‑1 (MQ=255)
tGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTAc < 2:4396153/93‑1 (MQ=255)
cTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTa > 2:4310437/1‑93 (MQ=255)
tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa > 2:2114628/1‑93 (MQ=255)
aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa < 2:519406/93‑1 (MQ=255)
aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa > 1:3159776/1‑93 (MQ=255)
aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa > 2:1125398/1‑93 (MQ=255)
aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa < 1:357832/93‑1 (MQ=255)
ccTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAc < 2:3162058/93‑1 (MQ=255)
ccTGACAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGGCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAc < 2:1197152/93‑1 (MQ=255)
cTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAcc > 2:225728/1‑93 (MQ=255)
cTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAcc < 1:1022887/93‑1 (MQ=255)
tGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGTAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCg > 1:160877/1‑93 (MQ=255)
tAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGt > 1:1225297/1‑93 (MQ=255)
tAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGt > 2:4229085/1‑93 (MQ=255)
tAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGt > 1:2054099/1‑93 (MQ=255)
gcgcAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAc > 2:3376104/1‑93 (MQ=255)
gcagcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACtt > 1:3267957/1‑93 (MQ=255)
gcagcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACtt > 2:1971431/1‑93 (MQ=255)
gcagcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACtt > 1:4521840/1‑93 (MQ=255)
gcagcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACtt > 2:1005828/1‑93 (MQ=255)
gcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCt < 2:1654205/93‑1 (MQ=255)
aTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGa < 1:1563122/93‑1 (MQ=255)
tCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAc > 1:195474/1‑93 (MQ=255)
gTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCa > 2:3857483/1‑93 (MQ=255)
gTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCa > 2:4684835/1‑93 (MQ=255)
gTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCa > 2:767252/1‑93 (MQ=255)
tttCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCaa < 1:423679/93‑1 (MQ=255)
tttCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCaa < 1:511265/93‑1 (MQ=255)
tttCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCaa > 2:684665/1‑93 (MQ=255)
tCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAAtt > 1:3426097/1‑93 (MQ=255)
cACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAAttt < 2:1231250/93‑1 (MQ=255)
cccGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTa < 2:2632632/92‑1 (MQ=255)
aCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTa > 1:544315/1‑93 (MQ=255)
gCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCa < 1:3636964/93‑1 (MQ=255)
cccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACg < 2:2784192/93‑1 (MQ=255)
ccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGc < 2:2259684/93‑1 (MQ=255)
ccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGc > 2:84950/1‑93 (MQ=255)
gTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctc > 1:3755782/1‑93 (MQ=255)
tCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctct < 2:1732225/93‑1 (MQ=255)
cccAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctct < 2:244968/92‑1 (MQ=255)
cAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAGCGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttc < 1:758195/93‑1 (MQ=255)
cAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttc < 1:4379941/93‑1 (MQ=255)
aGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttct > 1:1978391/1‑93 (MQ=255)
aGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttct > 2:1518512/1‑93 (MQ=255)
gCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTcttctt < 1:2599354/93‑1 (MQ=255)
gCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTcttctt > 2:3258950/1‑93 (MQ=255)
tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg > 1:900675/1‑93 (MQ=255)
tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg > 1:3894095/1‑93 (MQ=255)
cGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGt > 1:4067812/1‑93 (MQ=255)
ggCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTc < 2:2053949/93‑1 (MQ=255)
ggCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTc > 1:255870/1‑93 (MQ=255)
ggCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTc > 1:43690/1‑93 (MQ=255)
ggCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTc > 2:4141221/1‑93 (MQ=255)
gCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTca > 1:3213759/1‑93 (MQ=255)
cACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTcac < 1:993129/93‑1 (MQ=255)
aCGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAGCCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTcaca < 1:1633924/93‑1 (MQ=255)
aCGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTcaca < 1:4023629/93‑1 (MQ=255)
aCGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTcaca > 2:4260762/1‑93 (MQ=255)
cGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAt < 1:2941974/93‑1 (MQ=255)
gTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAtt < 2:1371918/93‑1 (MQ=255)
gTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAtt > 1:2382655/1‑93 (MQ=255)
gTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAtt < 2:3726447/93‑1 (MQ=255)
tCACCGCGATGGAAGTAGGGCGCCGGTAAAGTAACGTTACGTAAACCGGGTACTTTCTGACGCAAGTTATGACGCTCTTCTTTAGGCACATTc > 2:2040590/1‑93 (MQ=255)
cACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCa < 2:3593043/93‑1 (MQ=255)
cACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCa > 2:3797410/1‑93 (MQ=255)
cACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCa < 1:2981427/93‑1 (MQ=255)
cACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCa < 1:2595492/93‑1 (MQ=255)
aCCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAt > 1:1715489/1‑93 (MQ=255)
ccGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATa < 1:2171732/93‑1 (MQ=255)
cgcgATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAc < 2:3021054/93‑1 (MQ=255)
gcgATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACg > 1:304735/1‑93 (MQ=255)
cgATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGa > 1:4335923/1‑93 (MQ=255)
gATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAc > 2:3661603/1‑93 (MQ=255)
aTGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAcc < 2:65762/93‑1 (MQ=255)
ggAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCaa < 1:4152602/93‑1 (MQ=255)
gTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATc < 1:62487/93‑1 (MQ=255)
atACGGCGCCGTGAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATc < 2:4468146/92‑1 (MQ=255)
tACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATcc < 2:3154442/93‑1 (MQ=255)
aCGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATccg > 1:306002/1‑93 (MQ=255)
cGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATccgc < 2:3513687/93‑1 (MQ=255)
|
TCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC > NC_000913/3665497‑3665675
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC > NC_000913/3665494‑3665679
|
TCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCG > SRR4302535.3979507/1‑94 (MQ=60)
CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCC > SRR4302535.3570191/1‑94 (MQ=60)
CCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGT > SRR4302535.19666/1‑94 (MQ=60)
CTGCGGCAGCTCTTTGCCTACCTGATAGCGAAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTT < SRR4302535.1776455/94‑1 (MQ=60)
TGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTA > SRR4302535.1165427/1‑94 (MQ=60)
GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG > SRR4302535.2845599/1‑94 (MQ=60)
CAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCA > SRR4302535.4014720/1‑94 (MQ=60)
CAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCA < SRR4302535.1101189/94‑1 (MQ=60)
GCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAC < SRR4302535.46443/94‑1 (MQ=60)
GCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAC > SRR4302535.2619279/1‑94 (MQ=60)
TCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGT > SRR4302535.1512717/1‑94 (MQ=60)
CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTT < SRR4302535.126486/94‑1 (MQ=60)
CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTT > SRR4302535.4482311/1‑94 (MQ=60)
CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTT < SRR4302535.242979/94‑1 (MQ=60)
CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTT > SRR4302535.40923/1‑94 (MQ=60)
TGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACG > SRR4302535.4576010/1‑94 (MQ=60)
CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTACAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA > SRR4302535.2615161/1‑94 (MQ=60)
TACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAA > SRR4302535.3181702/1‑94 (MQ=60)
ACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTCAAC > SRR4302535.3080938/1‑94 (MQ=60)
ACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAC < SRR4302535.360307/94‑1 (MQ=60)
CCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACC > SRR4302535.2254858/1‑94 (MQ=60)
CCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACC > SRR4302535.2474396/1‑94 (MQ=60)
CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGTAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG > SRR4302535.162004/1‑94 (MQ=60)
CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG < SRR4302535.1030152/94‑1 (MQ=60)
CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG > SRR4302535.1991460/1‑94 (MQ=60)
ATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGT > SRR4302535.1632988/1‑94 (MQ=60)
ATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGT > SRR4302535.1234059/1‑94 (MQ=60)
ATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGT > SRR4302535.2068897/1‑94 (MQ=60)
AGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGCAC > SRR4302535.669413/1‑94 (MQ=60)
GCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACT < SRR4302535.3130127/94‑1 (MQ=60)
CGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTT > SRR4302535.2596096/1‑94 (MQ=60)
CGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTT > SRR4302535.3290660/1‑94 (MQ=60)
CGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTT > SRR4302535.4552828/1‑94 (MQ=60)
CATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGA > SRR4302535.3261839/1‑94 (MQ=60)
ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC < SRR4302535.1574384/94‑1 (MQ=60)
ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC > SRR4302535.278918/1‑94 (MQ=60)
ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC > SRR4302535.196817/1‑94 (MQ=60)
AGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCA > SRR4302535.3661005/1‑94 (MQ=60)
TTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAAT < SRR4302535.514840/94‑1 (MQ=60)
TTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAAT < SRR4302535.426635/94‑1 (MQ=60)
TTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATT < SRR4302535.601859/94‑1 (MQ=60)
TTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATT > SRR4302535.3449921/1‑94 (MQ=60)
TCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTT > SRR4302535.2880548/1‑94 (MQ=60)
CACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTA > SRR4302535.548119/1‑94 (MQ=60)
CCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT < SRR4302535.4309819/94‑1 (MQ=60)
ACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT < SRR4302535.1238342/94‑1 (MQ=60)
CCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATC < SRR4302535.2118010/94‑1 (MQ=60)
CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCA > SRR4302535.4016783/1‑94 (MQ=60)
CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCA < SRR4302535.367407/94‑1 (MQ=60)
GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAACGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC < SRR4302535.3319496/94‑1 (MQ=60)
GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC < SRR4302535.3662167/94‑1 (MQ=60)
GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGAAATTTATCAC < SRR4302535.1592681/94‑1 (MQ=60)
CCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGC < SRR4302535.1532903/94‑1 (MQ=60)
CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC > SRR4302535.2969659/1‑94 (MQ=60)
CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC > SRR4302535.3781761/1‑94 (MQ=60)
CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAGCGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT < SRR4302535.763538/94‑1 (MQ=60)
CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT > SRR4302535.1992640/1‑94 (MQ=60)
CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT < SRR4302535.4409908/94‑1 (MQ=60)
GCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTT < SRR4302535.2618015/94‑1 (MQ=60)
CGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTA > SRR4302535.3543780/1‑94 (MQ=60)
GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG > SRR4302535.3920786/1‑94 (MQ=60)
GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG > SRR4302535.907051/1‑94 (MQ=60)
TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT > SRR4302535.3870226/1‑94 (MQ=60)
TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT > SRR4302535.4095646/1‑94 (MQ=60)
CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC > SRR4302535.44020/1‑94 (MQ=60)
CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC > SRR4302535.257631/1‑94 (MQ=60)
GGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCA > SRR4302535.3236015/1‑94 (MQ=60)
CACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACA < SRR4302535.4492560/94‑1 (MQ=60)
CACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACA < SRR4302535.1000181/94‑1 (MQ=60)
ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAGCCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT < SRR4302535.1645732/94‑1 (MQ=60)
ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT < SRR4302535.4051158/94‑1 (MQ=60)
CGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATT < SRR4302535.2962663/94‑1 (MQ=60)
CGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATT > SRR4302535.2399766/1‑94 (MQ=60)
CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT > SRR4302535.1002072/1‑94 (MQ=60)
CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT > SRR4302535.1727897/1‑94 (MQ=60)
CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT < SRR4302535.2614137/94‑1 (MQ=60)
CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT < SRR4302535.3002341/94‑1 (MQ=60)
CCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC < SRR4302535.1745156/94‑1 (MQ=60)
CCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC < SRR4302535.2187276/94‑1 (MQ=60)
CCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC < SRR4302535.535630/94‑1 (MQ=60)
CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG > SRR4302535.306850/1‑94 (MQ=60)
GCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGA > SRR4302535.4365579/1‑94 (MQ=60)
TGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAA > SRR4302535.4387721/1‑94 (MQ=60)
GGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAAT < SRR4302535.4181035/94‑1 (MQ=60)
AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT > SRR4302535.950658/1‑94 (MQ=60)
GTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCC < SRR4302535.4481905/94‑1 (MQ=60)
GTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCC < SRR4302535.62954/94‑1 (MQ=60)
TACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCG > SRR4302535.308120/1‑94 (MQ=60)
TACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCG < SRR4302535.4122205/94‑1 (MQ=60)
GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG > SRR4302535.4628989/1‑94 (MQ=60)
GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG < SRR4302535.2728245/94‑1 (MQ=60)
CGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTATTAACATTCATACGACAAATATCGCCCGCC > SRR4302535.1057186/1‑94 (MQ=60)
CGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC > SRR4302535.3985940/1‑94 (MQ=60)
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TCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC > NC_000913/3665494‑3665679
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
