Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,665,586 T→C A411A (GCA→GCG)  yhjA ← putative cytochrome C peroxidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,665,5860TC99.4% 1015.7 / ‑3.7 330A411A (GCA→GCG) yhjAputative cytochrome C peroxidase
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (175/153);  total (175/155)
Fisher's exact test for biased strand distribution p-value = 2.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.67e-01

Only 100 of 342 total aligned reads displayed.

CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC  >  NC_000913/3665496‑3665675
                                                                                          |                                                                                         
  cctGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCg                                                                                       >  1:1652625/1‑93 (MQ=255)
    tGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGtt                                                                                     >  2:316113/1‑93 (MQ=255)
    tGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGtt                                                                                     <  1:4837527/93‑1 (MQ=255)
      cGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTaa                                                                                   <  1:7709707/93‑1 (MQ=255)
       ggCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTaaa                                                                                  >  2:7294373/1‑93 (MQ=255)
        gCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAg                                                                                 >  2:5595902/1‑93 (MQ=255)
          cgCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCa                                                                               <  2:4814763/92‑1 (MQ=255)
           gCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTAACACAGATGGAAGTACAGCCCCGTTACAGCaa                                                                              >  1:345216/1‑93 (MQ=255)
            ctctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAc                                                                             <  2:3402932/93‑1 (MQ=255)
            ctctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAc                                                                             >  2:1573348/1‑93 (MQ=255)
            ctctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCATCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAc                                                                             >  1:1401777/1‑93 (MQ=255)
             tctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACg                                                                            >  2:5665189/1‑93 (MQ=255)
               tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGtt                                                                          >  2:879913/1‑93 (MQ=255)
               tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGtt                                                                          <  1:801912/93‑1 (MQ=255)
               tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGtt                                                                          >  1:4465756/1‑93 (MQ=255)
                 tGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTAc                                                                        <  2:3715364/93‑1 (MQ=255)
                     tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa                                                                    >  1:2985465/1‑93 (MQ=255)
                     tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa                                                                    >  2:7669152/1‑93 (MQ=255)
                     tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa                                                                    >  2:2498104/1‑93 (MQ=255)
                     tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa                                                                    >  2:6317225/1‑93 (MQ=255)
                     tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa                                                                    >  1:1369266/1‑93 (MQ=255)
                     tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGAGGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa                                                                    >  1:216606/1‑93 (MQ=255)
                      aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCATGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa                                                                   >  2:4671200/1‑93 (MQ=255)
                      aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa                                                                   >  2:225443/1‑93 (MQ=255)
                      aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa                                                                   >  1:6191282/1‑93 (MQ=255)
                      aCCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaaa                                                                   >  1:3869350/1‑93 (MQ=255)
                        cTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAcc                                                                 >  2:308934/1‑93 (MQ=255)
                        cTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAcc                                                                 >  2:4527847/1‑93 (MQ=255)
                        cTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAcc                                                                 <  1:5309353/93‑1 (MQ=255)
                           aTAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCggg                                                              >  2:1286951/1‑93 (MQ=255)
                            tAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGt                                                             >  2:2875630/1‑93 (MQ=255)
                            tAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGt                                                             >  2:6541745/1‑93 (MQ=255)
                             aGCGCAGCATCAGTTTCCCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTa                                                            <  1:1687500/93‑1 (MQ=255)
                              gcgcAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAc                                                           <  1:3961296/93‑1 (MQ=255)
                               cgcAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACt                                                          <  1:3576187/93‑1 (MQ=255)
                                  agcaTCAGTTTCACCGCCCCGTGCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTc                                                       >  2:3889193/1‑93 (MQ=255)
                                  agcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTc                                                       <  1:728260/93‑1 (MQ=255)
                                  agcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTc                                                       <  1:615783/93‑1 (MQ=255)
                                   gcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCt                                                      >  1:5215633/1‑93 (MQ=255)
                                   gcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCt                                                      <  2:4552700/93‑1 (MQ=255)
                                     aTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGa                                                    >  2:5698686/1‑93 (MQ=255)
                                     aTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGa                                                    <  1:5659800/93‑1 (MQ=255)
                                      tCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAc                                                   >  2:7751370/1‑93 (MQ=255)
                                      tCAGTTTCACCGCCCCGTCCAGCGTCGGCACATCACCGCGATGGAAGTACGGCGCCGTTAAAGCGACGTTACGTAAACCGGGTACTTTCTGAc                                                   >  2:4384096/1‑93 (MQ=255)
                                        aGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGc                                                 >  2:5121225/1‑93 (MQ=255)
                                          tttCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCaa                                               >  1:3581104/1‑93 (MQ=255)
                                          tttCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCaa                                               <  2:2110507/93‑1 (MQ=255)
                                            tCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAAtt                                             <  1:2364721/93‑1 (MQ=255)
                                             cACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAAttt                                            >  1:5073076/1‑93 (MQ=255)
                                                cGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATc                                         <  1:6466974/93‑1 (MQ=255)
                                                 gCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCa                                        <  1:2189796/93‑1 (MQ=255)
                                                  ccccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAc                                       <  1:122772/93‑1 (MQ=255)
                                                  ccccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAc                                       <  2:4126917/93‑1 (MQ=255)
                                                    ccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGc                                     >  1:3237588/1‑93 (MQ=255)
                                                      gTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctc                                   >  1:1880735/1‑93 (MQ=255)
                                                      gTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctc                                   >  1:2795651/1‑93 (MQ=255)
                                                      gTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctc                                   >  1:6675976/1‑93 (MQ=255)
                                                       tCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctct                                  >  1:5551200/1‑93 (MQ=255)
                                                       tCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctct                                  >  2:236097/1‑93 (MQ=255)
                                                       tCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctct                                  <  1:751361/93‑1 (MQ=255)
                                                       tCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctct                                  >  1:6914554/1‑93 (MQ=255)
                                                        ccAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtctt                                 >  1:951167/1‑93 (MQ=255)
                                                         cAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttt                                >  1:6002917/1‑92 (MQ=255)
                                                         cAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttc                                <  2:6403040/93‑1 (MQ=255)
                                                             gTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTa                            <  1:7852642/93‑1 (MQ=255)
                                                              tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg                           >  1:4126786/1‑93 (MQ=255)
                                                              tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg                           >  1:2488199/1‑93 (MQ=255)
                                                              tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg                           <  2:6890420/93‑1 (MQ=255)
                                                              tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg                           >  2:1768188/1‑93 (MQ=255)
                                                               cGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGt                          <  1:1792483/93‑1 (MQ=255)
                                                                ggCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTc                         <  1:5642336/93‑1 (MQ=255)
                                                                ggCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTc                         >  2:64530/1‑93 (MQ=255)
                                                                  cACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGCGACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTcac                       >  2:819653/1‑93 (MQ=255)
                                                                    cggcACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAt                     <  1:3747192/90‑1 (MQ=255)
                                                                     gTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAtt                    <  1:2623984/93‑1 (MQ=255)
                                                                      tCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTc                   >  1:2015619/1‑93 (MQ=255)
                                                                       cACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCa                  <  1:5469042/93‑1 (MQ=255)
                                                                        aCCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAt                 >  2:7488792/1‑93 (MQ=255)
                                                                         ccGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATa                <  2:6691637/93‑1 (MQ=255)
                                                                         ccGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATa                <  1:5941850/93‑1 (MQ=255)
                                                                          cgcgATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAc               >  2:7613033/1‑93 (MQ=255)
                                                                          cgcgATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAc               <  2:1045153/93‑1 (MQ=255)
                                                                           gcgATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAca              >  1:7537835/1‑92 (MQ=255)
                                                                             gATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAc            >  2:6072331/1‑93 (MQ=255)
                                                                             gATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAc            >  1:1052980/1‑93 (MQ=255)
                                                                             gATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAc            >  2:2828670/1‑93 (MQ=255)
                                                                              aTGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAcc           <  1:4372895/93‑1 (MQ=255)
                                                                              aTGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAcc           >  2:4785255/1‑93 (MQ=255)
                                                                              aTGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAcc           >  1:3094786/1‑93 (MQ=255)
                                                                               tGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCa          <  2:1165605/93‑1 (MQ=255)
                                                                                ggAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCaa         <  1:4023699/93‑1 (MQ=255)
                                                                                ggAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCaa         <  1:2434242/93‑1 (MQ=255)
                                                                                 gAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAat        >  2:7212407/1‑93 (MQ=255)
                                                                                  aaGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAata       <  1:3402381/93‑1 (MQ=255)
                                                                                  aaGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAata       <  1:7173908/93‑1 (MQ=255)
                                                                                   aGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAatat      <  2:4267842/93‑1 (MQ=255)
                                                                                    gTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATc     >  2:3623514/1‑93 (MQ=255)
                                                                                    gTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATc     <  1:2262684/93‑1 (MQ=255)
                                                                                    gTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATc     >  2:777827/1‑93 (MQ=255)
                                                                                     tACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATcc    <  2:5191690/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC  >  NC_000913/3665496‑3665675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG  >  NC_000913/3665493‑3665677
                                                                                             |                                                                                           
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGC                                                                                             >  SRR4302543.7809837/1‑94 (MQ=60)
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGC                                                                                             >  SRR4302543.3722737/1‑94 (MQ=60)
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGC                                                                                             >  SRR4302543.7987411/1‑94 (MQ=60)
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGC                                                                                             >  SRR4302543.7987410/1‑94 (MQ=60)
  CCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGC                                                                                           <  SRR4302543.6732868/94‑1 (MQ=60)
   CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCC                                                                                          >  SRR4302543.6229847/1‑94 (MQ=60)
    TCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCG                                                                                         >  SRR4302543.1667407/1‑94 (MQ=60)
    CCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCG                                                                                         <  SRR4302543.7687860/94‑1 (MQ=60)
     CCTGCGGCAGCTCTTTGCCCACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGT                                                                                        <  SRR4302543.7552711/94‑1 (MQ=60)
      CTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTT                                                                                       >  SRR4302543.5666759/1‑94 (MQ=60)
       TGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTA                                                                                      <  SRR4302543.4881643/94‑1 (MQ=60)
       TGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTA                                                                                      <  SRR4302543.6039310/94‑1 (MQ=60)
         CGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAA                                                                                    <  SRR4302543.7782636/94‑1 (MQ=60)
          GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG                                                                                   >  SRR4302543.241463/1‑94 (MQ=60)
          GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG                                                                                   >  SRR4302543.1700316/1‑94 (MQ=60)
             AGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAA                                                                                >  SRR4302543.348406/1‑94 (MQ=60)
             AGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAA                                                                                >  SRR4302543.3973039/1‑94 (MQ=60)
              GCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAC                                                                               <  SRR4302543.27696/94‑1 (MQ=60)
              GCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCATCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAC                                                                               >  SRR4302543.1414429/1‑94 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACT                                                                              >  SRR4302543.1799908/1‑94 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACG                                                                              >  SRR4302543.5577259/1‑94 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACG                                                                              <  SRR4302543.2624601/94‑1 (MQ=60)
                 CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTT                                                                            >  SRR4302543.4506236/1‑94 (MQ=60)
                  TTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTA                                                                           <  SRR4302543.808966/94‑1 (MQ=60)
                   TTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTAC                                                                          <  SRR4302543.7401084/94‑1 (MQ=60)
                    TGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACG                                                                         >  SRR4302543.2288707/1‑94 (MQ=60)
                     GCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGT                                                                        <  SRR4302543.6770061/94‑1 (MQ=60)
                      CCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTA                                                                       >  SRR4302543.2870727/1‑94 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      >  SRR4302543.7054662/1‑94 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      <  SRR4302543.2543863/94‑1 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      >  SRR4302543.3012577/1‑94 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      >  SRR4302543.7606412/1‑94 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      >  SRR4302543.1381556/1‑94 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      >  SRR4302543.1790305/1‑94 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      <  SRR4302543.6019974/94‑1 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGAGGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                      >  SRR4302543.218472/1‑94 (MQ=60)
                        TACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAA                                                                     >  SRR4302543.5591293/1‑94 (MQ=60)
                        TACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAA                                                                     >  SRR4302543.3446398/1‑94 (MQ=60)
                        TACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAA                                                                     >  SRR4302543.3903519/1‑94 (MQ=60)
                        TACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAA                                                                     >  SRR4302543.6249783/1‑94 (MQ=60)
                        TACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAA                                                                     <  SRR4302543.5352630/94‑1 (MQ=60)
                           CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG                                                                  >  SRR4302543.3529402/1‑94 (MQ=60)
                           CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG                                                                  <  SRR4302543.5357307/94‑1 (MQ=60)
                           CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGCACGGCGCCGTTAAAGCAACGTTACGTAAACCG                                                                  >  SRR4302543.5527385/1‑94 (MQ=60)
                              ATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGT                                                               >  SRR4302543.4175934/1‑94 (MQ=60)
                              ATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGT                                                               >  SRR4302543.4503874/1‑94 (MQ=60)
                                AGCGCAGCATCAGTTTCCCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAC                                                             <  SRR4302543.1702652/94‑1 (MQ=60)
                                AGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAT                                                             >  SRR4302543.2514192/1‑94 (MQ=60)
                                 GCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACT                                                            <  SRR4302543.3996377/94‑1 (MQ=60)
                                  CGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTT                                                           >  SRR4302543.3653260/1‑94 (MQ=60)
                                  CGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTT                                                           <  SRR4302543.3607788/94‑1 (MQ=60)
                                    CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                         <  SRR4302543.199813/94‑1 (MQ=60)
                                    CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                         <  SRR4302543.5202892/94‑1 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                        <  SRR4302543.621414/94‑1 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                        <  SRR4302543.5853931/94‑1 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                        >  SRR4302543.3889179/1‑94 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                        <  SRR4302543.6077237/94‑1 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                        >  SRR4302543.5262621/1‑94 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                        <  SRR4302543.3163247/94‑1 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                        <  SRR4302543.734802/94‑1 (MQ=60)
                                      GCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAGCCGGGTACTTTCTG                                                       <  SRR4302543.913539/94‑1 (MQ=60)
                                       CATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGA                                                      >  SRR4302543.5337874/1‑94 (MQ=60)
                                       CATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGA                                                      >  SRR4302543.6443929/1‑94 (MQ=60)
                                       CATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGA                                                      >  SRR4302543.3022964/1‑94 (MQ=60)
                                        ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                     >  SRR4302543.6687057/1‑94 (MQ=60)
                                        ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                     <  SRR4302543.4043845/94‑1 (MQ=60)
                                        ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                     <  SRR4302543.5711422/94‑1 (MQ=60)
                                         TCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACG                                                    <  SRR4302543.4326827/94‑1 (MQ=60)
                                          CAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGC                                                   >  SRR4302543.944859/1‑94 (MQ=60)
                                           AGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCA                                                  >  SRR4302543.6261000/1‑94 (MQ=60)
                                           AGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCA                                                  >  SRR4302543.4862557/1‑94 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTGCTTTCTGACGGAA                                                 >  SRR4302543.3022508/1‑94 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                 <  SRR4302543.6133157/94‑1 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                 >  SRR4302543.3612739/1‑94 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                 >  SRR4302543.3609027/1‑94 (MQ=60)
                                              TTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATT                                               <  SRR4302543.4719539/94‑1 (MQ=60)
                                               TCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTT                                              <  SRR4302543.2386166/94‑1 (MQ=60)
                                               TCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTT                                              >  SRR4302543.5119112/1‑94 (MQ=60)
                                                CACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTA                                             >  SRR4302543.7247588/1‑94 (MQ=60)
                                                CACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTA                                             >  SRR4302543.2192332/1‑94 (MQ=60)
                                                   CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCA                                          <  SRR4302543.6527902/94‑1 (MQ=60)
                                                   CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCA                                          >  SRR4302543.4158317/1‑94 (MQ=60)
                                                   CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCA                                          >  SRR4302543.5415558/1‑94 (MQ=60)
                                                   CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGAAATTTATCA                                          >  SRR4302543.1384766/1‑94 (MQ=60)
                                                    ctCCCGTCCAGCGTCTGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         <  SRR4302543.2209453/92‑1 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         <  SRR4302543.7831710/94‑1 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         <  SRR4302543.7698769/94‑1 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         >  SRR4302543.205540/1‑94 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         <  SRR4302543.3533700/94‑1 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         <  SRR4302543.2209454/94‑1 (MQ=60)
                                                    CCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         <  SRR4302543.1393987/94‑1 (MQ=60)
                                                    CCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                         <  SRR4302543.4052669/94‑1 (MQ=60)
                                                     CCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACG                                        >  SRR4302543.844126/1‑94 (MQ=60)
                                                     CCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACG                                        >  SRR4302543.759694/1‑94 (MQ=60)
                                                     CCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACG                                        <  SRR4302543.123883/94‑1 (MQ=60)
                                                      CTCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGC                                       >  SRR4302543.5338960/1‑94 (MQ=60)
                                                      CCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGC                                       >  SRR4302543.2823436/1‑94 (MQ=60)
                                                      CCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGC                                       >  SRR4302543.3266874/1‑94 (MQ=60)
                                                      CCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGC                                       >  SRR4302543.249673/1‑94 (MQ=60)
                                                       CCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCT                                      <  SRR4302543.2351071/94‑1 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                     >  SRR4302543.1897634/1‑94 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                     >  SRR4302543.2821199/1‑94 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                     >  SRR4302543.6739007/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    >  SRR4302543.6979550/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    <  SRR4302543.1172909/94‑1 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    <  SRR4302543.1260463/94‑1 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    >  SRR4302543.1272034/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    >  SRR4302543.1969348/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    >  SRR4302543.2262264/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    >  SRR4302543.5601681/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    >  SRR4302543.6329004/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    <  SRR4302543.3609459/94‑1 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                    >  SRR4302543.3987983/1‑94 (MQ=60)
                                                          TCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTT                                   <  SRR4302543.758026/94‑1 (MQ=60)
                                                          TCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTT                                   >  SRR4302543.959477/1‑94 (MQ=60)
                                                          TCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTT                                   <  SRR4302543.4912318/94‑1 (MQ=60)
                                                           CCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTT                                  >  SRR4302543.6058114/1‑94 (MQ=60)
                                                           CCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTC                                  >  SRR4302543.7822531/1‑94 (MQ=60)
                                                            CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT                                 <  SRR4302543.7947154/94‑1 (MQ=60)
                                                               CGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTA                              >  SRR4302543.1839325/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             >  SRR4302543.2510745/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             >  SRR4302543.570427/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             <  SRR4302543.7926631/94‑1 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             <  SRR4302543.7926632/94‑1 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             >  SRR4302543.36529/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             >  SRR4302543.4163994/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             <  SRR4302543.7465030/94‑1 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                             >  SRR4302543.7224747/1‑94 (MQ=60)
                                                                  CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC                           <  SRR4302543.2770752/94‑1 (MQ=60)
                                                                  CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC                           <  SRR4302543.1808524/94‑1 (MQ=60)
                                                                   GGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCA                          <  SRR4302543.7319523/94‑1 (MQ=60)
                                                                   GGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCA                          <  SRR4302543.5693775/94‑1 (MQ=60)
                                                                    GCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCAC                         <  SRR4302543.6869207/94‑1 (MQ=60)
                                                                    GCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGGACTGTCTGCCGCAATTTATCACGCTCTTCTTTAGTCAC                         >  SRR4302543.2256396/1‑94 (MQ=60)
                                                                      CCGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT                       <  SRR4302543.1822993/94‑1 (MQ=60)
                                                                      ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT                       >  SRR4302543.5867953/1‑94 (MQ=60)
                                                                      ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT                       >  SRR4302543.4229120/1‑94 (MQ=60)
                                                                       CGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATT                      <  SRR4302543.3780378/94‑1 (MQ=60)
                                                                       CGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATT                      >  SRR4302543.4106591/1‑94 (MQ=60)
                                                                       CGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATT                      >  SRR4302543.1524072/1‑94 (MQ=60)
                                                                       CGGCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATT                      <  SRR4302543.3780160/94‑1 (MQ=60)
                                                                        GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTC                     <  SRR4302543.2647741/94‑1 (MQ=60)
                                                                        GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTC                     >  SRR4302543.2033734/1‑94 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                   <  SRR4302543.5518579/94‑1 (MQ=60)
                                                                           ACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATA                  >  SRR4302543.7631653/1‑94 (MQ=60)
                                                                           ACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATA                  >  SRR4302543.1671651/1‑94 (MQ=60)
                                                                           ACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATA                  >  SRR4302543.1671652/1‑94 (MQ=60)
                                                                            CCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC                 <  SRR4302543.5996223/94‑1 (MQ=60)
                                                                            CCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC                 <  SRR4302543.5255937/94‑1 (MQ=60)
                                                                             CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG                <  SRR4302543.1951185/94‑1 (MQ=60)
                                                                             CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG                <  SRR4302543.138780/94‑1 (MQ=60)
                                                                             CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG                <  SRR4302543.5696301/94‑1 (MQ=60)
                                                                             CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACA                >  SRR4302543.7609694/1‑94 (MQ=60)
                                                                             CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTCTAGTCACATTCATACG                <  SRR4302543.6235289/94‑1 (MQ=60)
                                                                              GCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGA               <  SRR4302543.1431173/94‑1 (MQ=60)
                                                                              GCGATGGAAGTACGGCACCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGA               <  SRR4302543.299619/94‑1 (MQ=60)
                                                                               CGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAC              >  SRR4302543.1062417/1‑94 (MQ=60)
                                                                               CGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAC              <  SRR4302543.5716190/94‑1 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC             >  SRR4302543.5046923/1‑94 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC             <  SRR4302543.248950/94‑1 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC             >  SRR4302543.5618385/1‑94 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC             <  SRR4302543.376329/94‑1 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC             <  SRR4302543.2065814/94‑1 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC             >  SRR4302543.3122622/1‑94 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC             >  SRR4302543.3217072/1‑94 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCA            <  SRR4302543.6701019/94‑1 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCA            <  SRR4302543.4412496/94‑1 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCA            >  SRR4302543.2390131/1‑94 (MQ=60)
                                                                                  TGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAA           <  SRR4302543.233868/94‑1 (MQ=60)
                                                                                   GGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAAT          <  SRR4302543.2456206/94‑1 (MQ=60)
                                                                                   GGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAAT          <  SRR4302543.4059649/94‑1 (MQ=60)
                                                                                   GGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAAT          <  SRR4302543.4059648/94‑1 (MQ=60)
                                                                                   GGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAAT          >  SRR4302543.1187605/1‑94 (MQ=60)
                                                                                    GAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATA         <  SRR4302543.3299764/94‑1 (MQ=60)
                                                                                    GAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATA         >  SRR4302543.6079800/1‑94 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT        >  SRR4302543.3304783/1‑94 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT        <  SRR4302543.3432858/94‑1 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT        <  SRR4302543.7243553/94‑1 (MQ=60)
                                                                                      AGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATC       >  SRR4302543.3455068/1‑94 (MQ=60)
                                                                                       GTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCC      <  SRR4302543.711187/94‑1 (MQ=60)
                                                                                       GTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCC      <  SRR4302543.4431392/94‑1 (MQ=60)
                                                                                       GTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCC      <  SRR4302543.2283330/94‑1 (MQ=60)
                                                                                         ACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC    <  SRR4302543.2193148/94‑1 (MQ=60)
                                                                                         ACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC    <  SRR4302543.5475070/94‑1 (MQ=60)
                                                                                          CGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCC   <  SRR4302543.3341325/94‑1 (MQ=60)
                                                                                           GGCGCCGTTAAAGCAACGTTACGTAAGCCGGGTACTTTCTGACGCAAGTTATCACGCTCTTCGTTAGTCACATTCATACGACCAATATCCGCTG  <  SRR4302543.6663219/94‑1 (MQ=60)
                                                                                           GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG  <  SRR4302543.5562019/94‑1 (MQ=60)
                                                                                           GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG  <  SRR4302543.4560280/94‑1 (MQ=60)
                                                                                           GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG  <  SRR4302543.4825224/94‑1 (MQ=60)
                                                                                           GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG  <  SRR4302543.2329908/94‑1 (MQ=60)
                                                                                           GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG  <  SRR4302543.2594898/94‑1 (MQ=60)
                                                                                             |                                                                                           
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG  >  NC_000913/3665493‑3665677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑