Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,911,767 |
A→G |
R354R (CGT→CGC) |
glmU ← |
N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,911,767 | 0 | A | G | 100.0%
| 703.5
/ NA
| 225 | R354R (CGT→CGC) | glmU | N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (132/93); total (132/93) |
Only 100 of 240 total aligned reads displayed.
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT > NC_000913/3911677‑3911856
|
aTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCt > 1:3280450/1‑93 (MQ=255)
tgtctCCCGCGCAGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt < 2:217827/89‑1 (MQ=255)
tGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt > 2:3101929/1‑93 (MQ=255)
ggTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttt > 1:2851865/1‑93 (MQ=255)
gTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtttt > 2:200357/1‑93 (MQ=255)
ttCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttttt < 2:134278/93‑1 (MQ=255)
ttCCCGCGCCGATGTTAACGTTATCGACAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttttt < 1:2145958/93‑1 (MQ=255)
gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc < 1:2186088/93‑1 (MQ=255)
gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCACGCGCGCTCTTTTCAtc > 1:831010/1‑93 (MQ=255)
cgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtct < 1:3204870/93‑1 (MQ=255)
cgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtct < 1:2998783/93‑1 (MQ=255)
gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc < 1:1492156/93‑1 (MQ=255)
gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc < 2:4200259/93‑1 (MQ=255)
gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTAAtctc > 1:2695213/1‑93 (MQ=255)
gcCGATGTGAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc < 2:1219999/93‑1 (MQ=255)
cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCaa < 1:1365080/93‑1 (MQ=255)
cGATGTTAACGTTATCGCCAATTTCCGCATAGACCAGGTAAGTCAGATGACCTGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCaa > 2:4492455/1‑93 (MQ=255)
gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc > 1:1597071/1‑93 (MQ=255)
gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc < 1:1933144/93‑1 (MQ=255)
gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc > 1:911702/1‑93 (MQ=255)
tGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGa > 1:587115/1‑93 (MQ=255)
gTTAACGTTATCGCCAATTTCCGCATCGCTCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa < 1:2723810/93‑1 (MQ=255)
gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa < 1:2198571/93‑1 (MQ=255)
gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa > 1:484431/1‑93 (MQ=255)
ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCCACGAAg > 2:4154495/1‑93 (MQ=255)
ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAg < 2:3175855/93‑1 (MQ=255)
ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAg > 2:4640383/1‑93 (MQ=255)
tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGt < 1:397060/93‑1 (MQ=255)
tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGt > 2:3840842/1‑93 (MQ=255)
aaCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGtt > 1:2328407/1‑93 (MQ=255)
gTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAcc > 1:2306979/1‑93 (MQ=255)
ttATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCg > 1:2988585/1‑93 (MQ=255)
ctATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCg > 2:1580727/2‑93 (MQ=255)
tATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGa < 2:2770768/93‑1 (MQ=255)
aTCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAc > 1:2556831/1‑93 (MQ=255)
tCGCCAATTTCCGCATCGGGCAGGTAAGTCAGATGACCAGCTTTCGAGTCTTTACCCAGGCGCGATCTTCTCATCTCAACGCAGTTACAGatc > 2:4447470/1‑91 (MQ=255)
tCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACg > 2:2071727/1‑93 (MQ=255)
tCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACg > 1:1924206/1‑93 (MQ=255)
cggcAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGt < 2:1419731/90‑1 (MQ=255)
cGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGt < 1:3723149/93‑1 (MQ=255)
ccAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGa > 1:4062575/1‑93 (MQ=255)
cAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAg > 1:3084915/1‑93 (MQ=255)
cAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAg > 1:2539202/1‑93 (MQ=255)
aaTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGc > 2:4107266/1‑93 (MQ=255)
aTTTCCGCATCGCCCAGGTAAGTCAGATGGCCCGGTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCa < 1:511499/93‑1 (MQ=255)
tCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCt > 2:1710477/1‑93 (MQ=255)
cGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCCCCTTc > 2:1917889/1‑93 (MQ=255)
gCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc < 1:4016428/93‑1 (MQ=255)
gCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc < 2:3797294/93‑1 (MQ=255)
cATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCa < 2:2604006/93‑1 (MQ=255)
aTCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAg < 1:1865650/93‑1 (MQ=255)
tCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCCACGAAGTTACCGACGTGAGCACCTTCCCGc > 2:4128168/1‑93 (MQ=255)
tCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGc > 1:1137095/1‑93 (MQ=255)
cGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCa < 1:2084559/93‑1 (MQ=255)
gCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCaa > 1:2819808/1‑93 (MQ=255)
cccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAc < 1:4484347/93‑1 (MQ=255)
ccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACt > 2:3140312/1‑93 (MQ=255)
cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc > 1:1845713/1‑93 (MQ=255)
cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc > 2:4331540/1‑93 (MQ=255)
aGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCa < 2:4177061/93‑1 (MQ=255)
ggTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAg < 2:1054204/93‑1 (MQ=255)
gTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGc < 1:4319092/93‑1 (MQ=255)
tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCa > 2:2498615/1‑93 (MQ=255)
aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAc > 2:1147158/1‑93 (MQ=255)
aGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAcc < 1:2065879/93‑1 (MQ=255)
gTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCa < 2:2647564/93‑1 (MQ=255)
tCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAg < 1:1025571/93‑1 (MQ=255)
cAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAgg > 2:1611461/1‑93 (MQ=255)
cAGATGACCAGCGTTCGAGCCTTTACCCAGGCGCTCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAgg < 1:2390035/93‑1 (MQ=255)
aGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa < 2:473811/93‑1 (MQ=255)
gATGACCAGCTTTCGAGCCTTTACCCAGGCGGGCCTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCATGAACTCAGCAACAGGAc > 2:4008878/1‑93 (MQ=255)
gATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc > 2:3772267/1‑93 (MQ=255)
gATGACCAGCTTTCGAGCCATTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc > 2:4554372/1‑93 (MQ=255)
tGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgc > 2:917224/1‑93 (MQ=255)
gACCAGTTTTCGAGCCTTTACCCAGGCTCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgca < 2:815218/93‑1 (MQ=255)
aCCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaa > 2:2302912/1‑93 (MQ=255)
ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa < 1:1394171/93‑1 (MQ=255)
cAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaac < 2:4518879/93‑1 (MQ=255)
cAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaac < 1:678026/93‑1 (MQ=255)
cAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaac > 1:4638416/1‑93 (MQ=255)
aGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacg > 1:1646714/1‑93 (MQ=255)
gCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCCTCTCAACGAAGTTACCGACGTGAGGACCTTCCAGCAACTCAGCCCCAGGACgcaaacgg > 2:3403319/1‑93 (MQ=255)
gCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgg > 2:1251746/1‑93 (MQ=255)
tttCGAGCCTTTACCCAGGCGTGCTTTTCTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggc < 2:357906/93‑1 (MQ=255)
ttCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggca < 1:4212524/93‑1 (MQ=255)
ttCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggca < 2:2268715/93‑1 (MQ=255)
tCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaa < 1:2647028/93‑1 (MQ=255)
gAGCCTTTACCCAGGCGCGCTTTTATCATCTCAACGAAGTTACCGACGAGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaac < 2:2704140/93‑1 (MQ=255)
cgCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg > 1:4423928/2‑93 (MQ=255)
aGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg < 1:1076936/93‑1 (MQ=255)
aGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacggacaaacg > 2:4424678/1‑93 (MQ=255)
gCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacgg > 1:3451271/1‑93 (MQ=255)
gCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacgg > 2:1938261/1‑93 (MQ=255)
ccTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGcaaacgggcaaacggg > 2:1524939/1‑93 (MQ=255)
cTTTACCCAGGCGCGCTTTTTTTATCTCAACGAAGGTAACGACGTGAGGACCTTTCAGCAACTCAGCACCAAGACGcaaacgggcaaacgggg > 2:4045735/1‑92 (MQ=255)
cTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCaaacgggcaaacgggc < 1:772042/93‑1 (MQ=255)
tACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCaa > 1:1703966/1‑93 (MQ=255)
tACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCaa > 1:1188737/1‑93 (MQ=255)
tcccAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAAt < 1:1008565/92‑1 (MQ=255)
cAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGt > 1:414243/1‑93 (MQ=255)
|
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT > NC_000913/3911677‑3911856
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA > NC_000913/3911674‑3911859
|
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG < SRR4302535.269962/94‑1 (MQ=60)
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG < SRR4302535.4141487/94‑1 (MQ=60)
CAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGACAGATGACCAGCTTTCGAGCCTTTACCCAGGC < SRR4302535.190604/94‑1 (MQ=60)
AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG < SRR4302535.94218/94‑1 (MQ=60)
AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG > SRR4302535.2097305/1‑94 (MQ=60)
AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG < SRR4302535.3714938/94‑1 (MQ=60)
AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG > SRR4302535.1493038/1‑94 (MQ=60)
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGC > SRR4302535.1297723/1‑94 (MQ=60)
GTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCG > SRR4302535.4345465/1‑94 (MQ=60)
AATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCT > SRR4302535.3303235/1‑94 (MQ=60)
ATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTT > SRR4302535.2831413/1‑94 (MQ=60)
TGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTT > SRR4302535.1150041/1‑94 (MQ=60)
TGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTT > SRR4302535.2872072/1‑94 (MQ=60)
TTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTT > SRR4302535.1526031/1‑94 (MQ=60)
TTCCCGCGCCGATGTTAACGTTATCGACAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTT < SRR4302535.2161396/94‑1 (MQ=60)
TCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTC < SRR4302535.2724521/94‑1 (MQ=60)
CCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACACAGGCGCGCTTTTTTCA > SRR4302535.1533779/1‑94 (MQ=60)
CGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCACGCGCGCTCTTTTCATC > SRR4302535.836834/1‑94 (MQ=60)
GCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT < SRR4302535.2201665/94‑1 (MQ=60)
GCGCCGATGTTAACGTTATCGCCAAGTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT < SRR4302535.4505965/94‑1 (MQ=60)
CGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTC < SRR4302535.3227064/94‑1 (MQ=60)
CGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTC < SRR4302535.3019809/94‑1 (MQ=60)
CGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTAATCTC > SRR4302535.2714478/1‑94 (MQ=60)
GCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCA < SRR4302535.1502873/94‑1 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC > SRR4302535.1608589/1‑94 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC > SRR4302535.918185/1‑94 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC > SRR4302535.2609076/1‑94 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC < SRR4302535.1374841/94‑1 (MQ=60)
GATTTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG < SRR4302535.1332304/94‑1 (MQ=60)
GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG > SRR4302535.1863882/1‑94 (MQ=60)
GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG < SRR4302535.1947068/94‑1 (MQ=60)
ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA > SRR4302535.802228/1‑94 (MQ=60)
ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA > SRR4302535.620091/1‑94 (MQ=60)
ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA > SRR4302535.591228/1‑94 (MQ=60)
TGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAA > SRR4302535.487824/1‑94 (MQ=60)
TGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAA > SRR4302535.2899633/1‑94 (MQ=60)
GTTAACGTTATCGCCAATTTCCGCATCGCTCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG < SRR4302535.2743264/94‑1 (MQ=60)
GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG < SRR4302535.4709136/94‑1 (MQ=60)
GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG < SRR4302535.2214235/94‑1 (MQ=60)
GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG < SRR4302535.2598291/94‑1 (MQ=60)
GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGCCAGATGACCAGCTTTCAAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAT > SRR4302535.1955083/1‑94 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTTATTTCAACGAAGTT > SRR4302535.4018971/1‑94 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT > SRR4302535.4062201/1‑94 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT < SRR4302535.399842/94‑1 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT > SRR4302535.3587191/1‑94 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT > SRR4302535.2183106/1‑94 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT < SRR4302535.2860557/94‑1 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT > SRR4302535.2345061/1‑94 (MQ=60)
TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACAAAGTT < SRR4302535.2490931/94‑1 (MQ=60)
CGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC > SRR4302535.2323481/1‑94 (MQ=60)
GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG < SRR4302535.1997800/94‑1 (MQ=60)
GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG > SRR4302535.3009539/1‑94 (MQ=60)
TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC > SRR4302535.2180844/1‑94 (MQ=60)
TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC > SRR4302535.2575240/1‑94 (MQ=60)
ATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACG > SRR4302535.436628/1‑94 (MQ=60)
ATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACG > SRR4302535.3014014/1‑94 (MQ=60)
ATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACG < SRR4302535.523619/94‑1 (MQ=60)
ATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACG > SRR4302535.1938075/1‑94 (MQ=60)
TCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGT < SRR4302535.2770807/94‑1 (MQ=60)
CGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTG < SRR4302535.3748939/94‑1 (MQ=60)
GCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGA > SRR4302535.4090380/1‑94 (MQ=60)
CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG > SRR4302535.2557493/1‑94 (MQ=60)
CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG > SRR4302535.696418/1‑94 (MQ=60)
CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG > SRR4302535.3106406/1‑94 (MQ=60)
CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGC < SRR4302535.2203766/94‑1 (MQ=60)
ATTTCCGCATCGCCCAGGTAAGTCAGATGGCCCGGTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAC < SRR4302535.515074/94‑1 (MQ=60)
CCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTC < SRR4302535.438545/94‑1 (MQ=60)
CGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCCACGAAGTTACCGACCTGAGCACCCTCC > SRR4302535.1814064/1‑94 (MQ=60)
CGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCC > SRR4302535.1892944/1‑94 (MQ=60)
GCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA < SRR4302535.2302806/94‑1 (MQ=60)
GCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA < SRR4302535.4043897/94‑1 (MQ=60)
ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC > SRR4302535.1145205/1‑94 (MQ=60)
ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC < SRR4302535.1879096/94‑1 (MQ=60)
CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA < SRR4302535.936493/94‑1 (MQ=60)
CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA > SRR4302535.2839835/1‑94 (MQ=60)
CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA < SRR4302535.3057316/94‑1 (MQ=60)
CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA < SRR4302535.2099573/94‑1 (MQ=60)
GCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAC > SRR4302535.2139944/1‑94 (MQ=60)
CCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACT < SRR4302535.4515132/94‑1 (MQ=60)
CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC > SRR4302535.4606100/1‑94 (MQ=60)
CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC > SRR4302535.1859014/1‑94 (MQ=60)
CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA > SRR4302535.705051/1‑94 (MQ=60)
AGGTAAGTCAGATGGCCAGCTTGCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGGCGTGAGCACCTTCCAGCAACTCAG < SRR4302535.558379/94‑1 (MQ=60)
AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG > SRR4302535.194374/1‑94 (MQ=60)
AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG < SRR4302535.4122781/94‑1 (MQ=60)
AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG > SRR4302535.166632/1‑94 (MQ=60)
GGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGC > SRR4302535.3416504/1‑94 (MQ=60)
GGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGC > SRR4302535.3811588/1‑94 (MQ=60)
GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA < SRR4302535.4348639/94‑1 (MQ=60)
AAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACC < SRR4302535.1045807/94‑1 (MQ=60)
AAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACC > SRR4302535.1896248/1‑94 (MQ=60)
AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTTAGCACCA > SRR4302535.3283545/1‑94 (MQ=60)
AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCA < SRR4302535.2080771/94‑1 (MQ=60)
TCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGG < SRR4302535.1032856/94‑1 (MQ=60)
CAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGC > SRR4302535.4030645/1‑94 (MQ=60)
CAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACAAAGTTACCGACGTGAGCTCCTTCCAGCAACTCAGCACCAGGA < SRR4302535.3381973/94‑1 (MQ=60)
CAGATGACCAGCGTTCGAGCCTTTACCCAGGCGCTCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGA < SRR4302535.2407220/94‑1 (MQ=60)
AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC > SRR4302535.3178451/1‑94 (MQ=60)
AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC < SRR4302535.1384469/94‑1 (MQ=60)
GATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACG < SRR4302535.4162521/94‑1 (MQ=60)
GATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACG < SRR4302535.2706276/94‑1 (MQ=60)
GACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAA > SRR4302535.2410776/1‑94 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAG > SRR4302535.4210306/1‑94 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC < SRR4302535.1109847/94‑1 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC > SRR4302535.4669875/1‑94 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC < SRR4302535.1404128/94‑1 (MQ=60)
CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG > SRR4302535.1658617/1‑94 (MQ=60)
CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG < SRR4302535.2951629/94‑1 (MQ=60)
CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG < SRR4302535.682765/94‑1 (MQ=60)
CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG > SRR4302535.499579/1‑94 (MQ=60)
AGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGG > SRR4302535.237662/1‑94 (MQ=60)
CTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGC > SRR4302535.1692404/1‑94 (MQ=60)
TTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCCGCAAATCAGCACCACGACGCAAACGGGCA > SRR4302535.857517/1‑94 (MQ=60)
TTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAA < SRR4302535.4241354/94‑1 (MQ=60)
TTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAA > SRR4302535.2328081/1‑94 (MQ=60)
TCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAA < SRR4302535.2665988/94‑1 (MQ=60)
CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC < SRR4302535.1020676/94‑1 (MQ=60)
GCGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACG > SRR4302535.4454226/1‑94 (MQ=60)
AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG < SRR4302535.1084596/94‑1 (MQ=60)
AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG > SRR4302535.1087393/1‑94 (MQ=60)
AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG > SRR4302535.3475260/1‑94 (MQ=60)
GCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGG > SRR4302535.256215/1‑94 (MQ=60)
GCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGG < SRR4302535.1623854/94‑1 (MQ=60)
CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC < SRR4302535.777474/94‑1 (MQ=60)
CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC > SRR4302535.2295861/1‑94 (MQ=60)
TTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAA > SRR4302535.1716285/1‑94 (MQ=60)
TTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAA > SRR4302535.1197250/1‑94 (MQ=60)
TCCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATG < SRR4302535.1015731/94‑1 (MQ=60)
CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT < SRR4302535.3166080/94‑1 (MQ=60)
CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT > SRR4302535.417150/1‑94 (MQ=60)
CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGA > SRR4302535.4544287/1‑94 (MQ=60)
GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA < SRR4302535.4184611/94‑1 (MQ=60)
|
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA > NC_000913/3911674‑3911859
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
