Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,911,767 A→G R354R (CGT→CGC glmU ← N‑acetyl glucosamine‑1‑phosphate uridyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,911,7670AG99.7% 1083.8 / NA 349R354R (CGT→CGCglmUN‑acetyl glucosamine‑1‑phosphate uridyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (175/173);  minor base T (0/1);  total (175/174)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 364 total aligned reads displayed.

GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT  >  NC_000913/3911677‑3911856
                                                                                          |                                                                                         
ggTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGcg                                                                                         >  1:7631756/1‑93 (MQ=255)
 gTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGgcgc                                                                                        >  2:3872017/1‑93 (MQ=255)
    aTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCt                                                                                     >  2:5321524/1‑93 (MQ=255)
     tGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt                                                                                    >  2:4781617/1‑93 (MQ=255)
     tGGTTCCCGCGCCGATGTTAACGTGATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt                                                                                    >  2:7588152/1‑93 (MQ=255)
      ggTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttt                                                                                   <  2:3991416/93‑1 (MQ=255)
       gTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGCTGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtttt                                                                                  >  1:3953736/1‑93 (MQ=255)
           ccGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCa                                                                              <  1:5204/93‑1 (MQ=255)
            cgcgCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAt                                                                             <  1:3888209/93‑1 (MQ=255)
             gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc                                                                            <  2:7786690/93‑1 (MQ=255)
             gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc                                                                            >  2:7488565/1‑93 (MQ=255)
             gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc                                                                            <  1:554805/93‑1 (MQ=255)
               gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc                                                                          <  1:7272063/93‑1 (MQ=255)
               gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc                                                                          >  1:3740378/1‑93 (MQ=255)
                  gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc                                                                       >  1:6321660/1‑93 (MQ=255)
                  gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc                                                                       >  2:6323287/1‑93 (MQ=255)
                  gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc                                                                       >  2:2002711/1‑93 (MQ=255)
                   aTGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACg                                                                      >  1:7435567/1‑93 (MQ=255)
                   aTGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACg                                                                      >  1:1853327/1‑93 (MQ=255)
                     gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa                                                                    <  1:2813949/93‑1 (MQ=255)
                     gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa                                                                    <  2:4250756/93‑1 (MQ=255)
                     gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa                                                                    <  2:334182/93‑1 (MQ=255)
                      ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAg                                                                   >  2:3609695/1‑93 (MQ=255)
                      ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAg                                                                   <  2:880236/93‑1 (MQ=255)
                      ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAg                                                                   <  1:4957973/93‑1 (MQ=255)
                      ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAg                                                                   >  1:3617199/1‑93 (MQ=255)
                       tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGt                                                                  >  2:4610466/1‑93 (MQ=255)
                        aaCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGtt                                                                 <  1:5812124/93‑1 (MQ=255)
                        aaCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGtt                                                                 >  1:734981/1‑93 (MQ=255)
                        aaCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGAGGGCCAGCTTTCGAGCCTTTAGCCAGGCGCGCGTTTTTCATCTCAACGAAGtt                                                                 >  1:1345350/1‑93 (MQ=255)
                         aCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTa                                                                <  1:2065647/93‑1 (MQ=255)
                         aCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTa                                                                <  2:7170722/93‑1 (MQ=255)
                          cGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAc                                                               <  2:3685453/93‑1 (MQ=255)
                          cGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAc                                                               <  1:6859644/93‑1 (MQ=255)
                           gTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAcc                                                              >  2:682112/1‑93 (MQ=255)
                            ttATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCACGCTTTTTTCATCTCAACGAAGTTAcag                                                             >  2:6164324/1‑91 (MQ=255)
                             tATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGa                                                            <  2:1855829/93‑1 (MQ=255)
                              aTCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAc                                                           <  2:627588/93‑1 (MQ=255)
                                  ccAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGTCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGa                                                       >  1:7715106/1‑93 (MQ=255)
                                  ccAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGa                                                       <  2:1618003/93‑1 (MQ=255)
                                  ccAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGa                                                       <  1:105376/93‑1 (MQ=255)
                                    aaTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGc                                                     <  2:7887685/93‑1 (MQ=255)
                                      tttCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAc                                                   >  1:3085767/1‑93 (MQ=255)
                                        tCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCt                                                 <  1:4165053/93‑1 (MQ=255)
                                         ccGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCtt                                                <  1:2288208/93‑1 (MQ=255)
                                           gCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc                                              >  2:7405575/1‑93 (MQ=255)
                                           ccATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc                                              <  1:6721342/92‑1 (MQ=255)
                                            cATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCa                                             <  2:1023752/93‑1 (MQ=255)
                                            cATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCa                                             <  1:4712380/93‑1 (MQ=255)
                                             aTCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAg                                            >  2:1712497/1‑93 (MQ=255)
                                             aTCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAg                                            <  2:5825845/93‑1 (MQ=255)
                                             aTCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAg                                            >  2:6083122/1‑93 (MQ=255)
                                             aTCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAg                                            <  1:4269736/93‑1 (MQ=255)
                                             aTCCCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAg                                            <  1:5976573/93‑1 (MQ=255)
                                              tCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGc                                           <  2:4359747/93‑1 (MQ=255)
                                              tCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGc                                           >  1:6416953/1‑93 (MQ=255)
                                                gCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCaa                                         >  1:534354/1‑93 (MQ=255)
                                                gCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCaa                                         >  2:5448435/1‑93 (MQ=255)
                                                  ccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACt                                       <  1:1252299/93‑1 (MQ=255)
                                                  ccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACt                                       >  2:6435280/1‑93 (MQ=255)
                                                  ccAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCACCGACGTTACCGACGTGTGCACCTTCCAGCAACt                                       >  1:3489271/1‑93 (MQ=255)
                                                   cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc                                      <  1:4442717/93‑1 (MQ=255)
                                                   cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc                                      <  2:2508440/93‑1 (MQ=255)
                                                   cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc                                      <  2:2318529/93‑1 (MQ=255)
                                                    aGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCa                                     >  1:5072879/1‑93 (MQ=255)
                                                       tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGcc                                  >  2:3782808/1‑92 (MQ=255)
                                                        aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAc                                 >  1:2526823/1‑93 (MQ=255)
                                                          gTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCa                               >  1:7854698/1‑93 (MQ=255)
                                                           tCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCCGCACCAg                              >  1:6960548/1‑93 (MQ=255)
                                                           tCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAg                              <  2:2968427/93‑1 (MQ=255)
                                                             aGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa                            <  1:3385968/93‑1 (MQ=255)
                                                             aGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa                            >  2:6688471/1‑93 (MQ=255)
                                                              gATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc                           <  1:1618506/93‑1 (MQ=255)
                                                              gATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc                           >  2:586645/1‑93 (MQ=255)
                                                              gATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGGGACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc                           >  2:7010276/1‑93 (MQ=255)
                                                                tGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgc                         >  2:4967289/1‑93 (MQ=255)
                                                                  aCCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaa                       <  2:2177211/93‑1 (MQ=255)
                                                                   ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa                      <  1:6209546/93‑1 (MQ=255)
                                                                   ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa                      <  2:4178512/93‑1 (MQ=255)
                                                                   ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa                      <  1:715265/93‑1 (MQ=255)
                                                                   ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa                      <  1:436349/93‑1 (MQ=255)
                                                                    cAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTGTCATCTCAACGACGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaac                     <  1:3277112/93‑1 (MQ=255)
                                                                     aGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacg                    >  1:5302399/1‑93 (MQ=255)
                                                                     aGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacg                    <  2:5061246/93‑1 (MQ=255)
                                                                      gCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgg                   >  2:1298209/1‑93 (MQ=255)
                                                                       cTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacggg                  <  2:304646/93‑1 (MQ=255)
                                                                        tttCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTGCCAGCAACTCAGCACCAGGACgcaaacgggc                 <  2:4763473/93‑1 (MQ=255)
                                                                         ttCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggca                >  2:266848/1‑93 (MQ=255)
                                                                           cGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa              <  1:797976/93‑1 (MQ=255)
                                                                           cGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa              <  2:6635902/93‑1 (MQ=255)
                                                                           cGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa              <  2:2898720/93‑1 (MQ=255)
                                                                            gAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaac             >  1:3858408/1‑93 (MQ=255)
                                                                            gAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaac             <  2:5230168/93‑1 (MQ=255)
                                                                             aGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg            <  2:6949263/93‑1 (MQ=255)
                                                                             aGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg            <  2:5941899/93‑1 (MQ=255)
                                                                             aGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg            <  2:2036452/93‑1 (MQ=255)
                                                                                cTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCaaacgggcaaacgggc         <  2:1182672/93‑1 (MQ=255)
                                                                                     cccAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATg    <  1:4605109/93‑1 (MQ=255)
                                                                                       cAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGt  >  2:569541/1‑93 (MQ=255)
                                                                                       cAGGCGCGCTTTTTTCATCTCAACAAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGt  >  2:3099401/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT  >  NC_000913/3911677‑3911856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  >  NC_000913/3911674‑3911860
                                                                                             |                                                                                             
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG                                                                                               <  SRR4302543.3401293/94‑1 (MQ=60)
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG                                                                                               <  SRR4302543.3981010/94‑1 (MQ=60)
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCGTTCGAGCCTTTACCCAGG                                                                                               <  SRR4302543.3981009/94‑1 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             >  SRR4302543.5639259/1‑94 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             <  SRR4302543.4969936/94‑1 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             >  SRR4302543.5203291/1‑94 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             >  SRR4302543.7704171/1‑94 (MQ=60)
   GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGC                                                                                            >  SRR4302543.2940992/1‑94 (MQ=60)
    GTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCG                                                                                           >  SRR4302543.3924569/1‑94 (MQ=60)
      AATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCT                                                                                         >  SRR4302543.1807306/1‑94 (MQ=60)
       ATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTT                                                                                        >  SRR4302543.81601/1‑94 (MQ=60)
       ATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTT                                                                                        >  SRR4302543.7932034/1‑94 (MQ=60)
       ATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTT                                                                                        >  SRR4302543.3320115/1‑94 (MQ=60)
         GGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGCTGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTT                                                                                      >  SRR4302543.3988724/1‑94 (MQ=60)
         GGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTT                                                                                      <  SRR4302543.1928838/94‑1 (MQ=60)
         GGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTT                                                                                      <  SRR4302543.3519601/94‑1 (MQ=60)
            TCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTC                                                                                   >  SRR4302543.560487/1‑94 (MQ=60)
            TCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTC                                                                                   >  SRR4302543.7668858/1‑94 (MQ=60)
             CCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTCCCCAGGCGCGCTTTTTTCA                                                                                  <  SRR4302543.3486265/94‑1 (MQ=60)
             CCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCA                                                                                  >  SRR4302543.5386537/1‑94 (MQ=60)
              CCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAT                                                                                 <  SRR4302543.5251/94‑1 (MQ=60)
               CGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATC                                                                                <  SRR4302543.3922533/94‑1 (MQ=60)
               CGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATC                                                                                <  SRR4302543.6462346/94‑1 (MQ=60)
                GCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT                                                                               <  SRR4302543.3184675/94‑1 (MQ=60)
                GCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT                                                                               <  SRR4302543.559899/94‑1 (MQ=60)
                 CGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTC                                                                              >  SRR4302543.7742717/1‑94 (MQ=60)
                 CGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTC                                                                              >  SRR4302543.3773282/1‑94 (MQ=60)
                  GCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCA                                                                             <  SRR4302543.7342308/94‑1 (MQ=60)
                  GCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCA                                                                             <  SRR4302543.3390750/94‑1 (MQ=60)
                  GCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCA                                                                             <  SRR4302543.7427239/94‑1 (MQ=60)
                  GCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCA                                                                             <  SRR4302543.5011096/94‑1 (MQ=60)
                   CCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAA                                                                            >  SRR4302543.7064463/1‑94 (MQ=60)
                   CCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAA                                                                            >  SRR4302543.7862019/1‑94 (MQ=60)
                    CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC                                                                           <  SRR4302543.3556037/94‑1 (MQ=60)
                    CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC                                                                           >  SRR4302543.6381103/1‑94 (MQ=60)
                    CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC                                                                           <  SRR4302543.1449372/94‑1 (MQ=60)
                    CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC                                                                           >  SRR4302543.5417584/1‑94 (MQ=60)
                     GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG                                                                          >  SRR4302543.2362378/1‑94 (MQ=60)
                     GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG                                                                          >  SRR4302543.1869990/1‑94 (MQ=60)
                     GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG                                                                          >  SRR4302543.7506848/1‑94 (MQ=60)
                      ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA                                                                         >  SRR4302543.3900054/1‑94 (MQ=60)
                      ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGA                                                                         >  SRR4302543.3810393/1‑94 (MQ=60)
                       TGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCCACGAA                                                                        >  SRR4302543.4258537/1‑94 (MQ=60)
                       TGTTAACGGTATCGCCAATTTCCTTAGCGCCCAGGTAAGTCAGATGACCAGCTTGCGAGCCTTTACCCAGGCGCGCCTTTTGCATCTCAACGAA                                                                        >  SRR4302543.7066017/1‑94 (MQ=60)
                        GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG                                                                       <  SRR4302543.2839723/94‑1 (MQ=60)
                        GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG                                                                       >  SRR4302543.3649082/1‑94 (MQ=60)
                         TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT                                                                      >  SRR4302543.443728/1‑94 (MQ=60)
                         TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT                                                                      >  SRR4302543.3054163/1‑94 (MQ=60)
                         TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT                                                                      >  SRR4302543.504173/1‑94 (MQ=60)
                         TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT                                                                      <  SRR4302543.5003110/94‑1 (MQ=60)
                          TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT                                                                     >  SRR4302543.4947885/1‑94 (MQ=60)
                          TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT                                                                     >  SRR4302543.741560/1‑94 (MQ=60)
                          TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGAGGGCCAGCTTTCGAGCCTTTAGCCAGGCGCGCGTTTTTCATCTCAACGAAGTT                                                                     >  SRR4302543.1357373/1‑94 (MQ=60)
                           AACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTA                                                                    <  SRR4302543.5864978/94‑1 (MQ=60)
                            ACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAC                                                                   <  SRR4302543.2084118/94‑1 (MQ=60)
                             CGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC                                                                  <  SRR4302543.6924301/94‑1 (MQ=60)
                              GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG                                                                 <  SRR4302543.2717247/94‑1 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               <  SRR4302543.6015216/94‑1 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               <  SRR4302543.2472858/94‑1 (MQ=60)
                                GATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               <  SRR4302543.4106456/94‑1 (MQ=60)
                                 ATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACG                                                              >  SRR4302543.1817856/1‑94 (MQ=60)
                                  TCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGT                                                             <  SRR4302543.1355562/94‑1 (MQ=60)
                                    GCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGTCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGA                                                           >  SRR4302543.7788073/1‑94 (MQ=60)
                                     CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG                                                          >  SRR4302543.4834410/1‑94 (MQ=60)
                                     CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG                                                          <  SRR4302543.106346/94‑1 (MQ=60)
                                     CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG                                                          >  SRR4302543.6907328/1‑94 (MQ=60)
                                      CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGC                                                         <  SRR4302543.1006254/94‑1 (MQ=60)
                                      CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGC                                                         <  SRR4302543.4488469/94‑1 (MQ=60)
                                      CAATTTCCGCATCGCCCAGGGAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGGTTTTTTCCTCTCAACGCATTTTCCGACGTGAGA                                                         >  SRR4302543.4273096/1‑94 (MQ=60)
                                       AATTTCCGCATCGCTCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCA                                                        >  SRR4302543.5272997/1‑94 (MQ=60)
                                        ATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCCACGAAGCTACCGACGTGAGCAC                                                       >  SRR4302543.5309521/1‑94 (MQ=60)
                                        ATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAC                                                       >  SRR4302543.3113521/1‑94 (MQ=60)
                                        ATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAC                                                       <  SRR4302543.5351851/94‑1 (MQ=60)
                                         TTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACC                                                      <  SRR4302543.6498497/94‑1 (MQ=60)
                                          TTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCT                                                     <  SRR4302543.5302292/94‑1 (MQ=60)
                                           TCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTT                                                    <  SRR4302543.4202767/94‑1 (MQ=60)
                                            CCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTC                                                   <  SRR4302543.2309101/94‑1 (MQ=60)
                                              GCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA                                                 >  SRR4302543.1113149/1‑94 (MQ=60)
                                              CCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA                                                 <  SRR4302543.6784865/94‑1 (MQ=60)
                                               CATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAG                                                >  SRR4302543.7255684/1‑94 (MQ=60)
                                               CATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAG                                                <  SRR4302543.4755442/94‑1 (MQ=60)
                                                CTCGCCCAGGTAAGGCAGAGGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACAAAGTTACCGACGTGAGCACCTTCCAGC                                               <  SRR4302543.905451/94‑1 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               >  SRR4302543.6477402/1‑94 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               >  SRR4302543.7461464/1‑94 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               <  SRR4302543.4308534/94‑1 (MQ=60)
                                                ATCCCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               <  SRR4302543.6031320/94‑1 (MQ=60)
                                                  CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA                                             >  SRR4302543.539301/1‑94 (MQ=60)
                                                  CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA                                             >  SRR4302543.1833372/1‑94 (MQ=60)
                                                    CCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACT                                           <  SRR4302543.625111/94‑1 (MQ=60)
                                                    CCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACT                                           <  SRR4302543.7012134/94‑1 (MQ=60)
                                                    CCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACT                                           <  SRR4302543.3302644/94‑1 (MQ=60)
                                                    CCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACT                                           >  SRR4302543.4390542/1‑94 (MQ=60)
                                                    CCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCACCGACGTTACCGACGTGTGCACCTTCCAGCAACT                                           >  SRR4302543.3520502/1‑94 (MQ=60)
                                                     CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGGACCCTCCAGCAACTC                                          >  SRR4302543.7007946/1‑94 (MQ=60)
                                                     CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC                                          <  SRR4302543.1263529/94‑1 (MQ=60)
                                                     CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC                                          >  SRR4302543.7238320/1‑94 (MQ=60)
                                                     CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC                                          <  SRR4302543.5098962/94‑1 (MQ=60)
                                                      CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA                                         <  SRR4302543.4525261/94‑1 (MQ=60)
                                                      CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA                                         <  SRR4302543.4482949/94‑1 (MQ=60)
                                                      CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA                                         >  SRR4302543.5118915/1‑94 (MQ=60)
                                                      CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA                                         <  SRR4302543.3914743/94‑1 (MQ=60)
                                                       AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG                                        <  SRR4302543.7960657/94‑1 (MQ=60)
                                                       AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG                                        >  SRR4302543.141372/1‑94 (MQ=60)
                                                       AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG                                        >  SRR4302543.6556597/1‑94 (MQ=60)
                                                       AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG                                        <  SRR4302543.7038455/94‑1 (MQ=60)
                                                       AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG                                        >  SRR4302543.4130214/1‑94 (MQ=60)
                                                        GGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGC                                       >  SRR4302543.2172671/1‑94 (MQ=60)
                                                         GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA                                      >  SRR4302543.4328505/1‑94 (MQ=60)
                                                          gaaagCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     <  SRR4302543.1622763/89‑1 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     >  SRR4302543.2549808/1‑94 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     >  SRR4302543.5228221/1‑94 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     <  SRR4302543.7921811/94‑1 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCACCAC                                     >  SRR4302543.5429329/1‑94 (MQ=60)
                                                           AAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACC                                    >  SRR4302543.396063/1‑94 (MQ=60)
                                                            AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCA                                   >  SRR4302543.7928701/1‑94 (MQ=60)
                                                             GTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCCGCACCAG                                  >  SRR4302543.7026045/1‑94 (MQ=60)
                                                             GTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAG                                  <  SRR4302543.4685776/94‑1 (MQ=60)
                                                              TCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGG                                 <  SRR4302543.4803496/94‑1 (MQ=60)
                                                               CAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGA                                >  SRR4302543.1274179/1‑94 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302543.3620401/94‑1 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302543.3416327/94‑1 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302543.3416326/94‑1 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               >  SRR4302543.3896674/1‑94 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302543.7794359/94‑1 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302543.6033265/94‑1 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               >  SRR4302543.4430198/1‑94 (MQ=60)
                                                                 GATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACG                              <  SRR4302543.1632931/94‑1 (MQ=60)
                                                                  ATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGC                             >  SRR4302543.3810587/1‑94 (MQ=60)
                                                                  ATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGGTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGA                             >  SRR4302543.638403/1‑94 (MQ=60)
                                                                   TGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCA                            <  SRR4302543.5928106/94‑1 (MQ=60)
                                                                     gcctcgtttccacCCTTTACCCAGGCCCGCTTTTTTCATCTCAACCAAGTTACCGACGTAAGCACCTTCCAGCAACTCAGCACCAGGACGCAAA                          <  SRR4302543.6794105/81‑1 (MQ=60)
                                                                     ACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAA                          >  SRR4302543.6128899/1‑94 (MQ=60)
                                                                     ACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAA                          >  SRR4302543.7355252/1‑94 (MQ=60)
                                                                     ACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAA                          >  SRR4302543.1336111/1‑94 (MQ=60)
                                                                     ACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAA                          <  SRR4302543.4294741/94‑1 (MQ=60)
                                                                     ACCAGCTTCCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAA                          <  SRR4302543.6794106/94‑1 (MQ=60)
                                                                      NCNGCTTNCGAGCCTTTACCNNGNCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         <  SRR4302543.2204360/94‑1 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         <  SRR4302543.6268177/94‑1 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         <  SRR4302543.440439/94‑1 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         >  SRR4302543.1943856/1‑94 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         <  SRR4302543.721741/94‑1 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         >  SRR4302543.4012436/1‑94 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         >  SRR4302543.6668074/1‑94 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        >  SRR4302543.5350272/1‑94 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        <  SRR4302543.3142907/94‑1 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        >  SRR4302543.5443517/1‑94 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTGTCATCTCAACGACGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        <  SRR4302543.3306708/94‑1 (MQ=60)
                                                                        AGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCCCCAGGACGCAAAAGG                       >  SRR4302543.6796081/1‑94 (MQ=60)
                                                                         GCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGG                      <  SRR4302543.2024244/94‑1 (MQ=60)
                                                                          CTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGC                     <  SRR4302543.7077045/94‑1 (MQ=60)
                                                                             TCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAA                  <  SRR4302543.7679054/94‑1 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 <  SRR4302543.7752558/94‑1 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 <  SRR4302543.804991/94‑1 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 >  SRR4302543.5603103/1‑94 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 <  SRR4302543.2253242/94‑1 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 >  SRR4302543.2654254/1‑94 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 >  SRR4302543.3892494/1‑94 (MQ=60)
                                                                               GAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACG                >  SRR4302543.7360531/1‑94 (MQ=60)
                                                                               GAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACG                <  SRR4302543.3783763/94‑1 (MQ=60)
                                                                                AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG               <  SRR4302543.1145586/94‑1 (MQ=60)
                                                                                AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG               <  SRR4302543.4617853/94‑1 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            >  SRR4302543.6288469/1‑94 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            >  SRR4302543.365323/1‑94 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            >  SRR4302543.7453660/1‑94 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            <  SRR4302543.2386889/94‑1 (MQ=60)
                                                                                    TTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCA           >  SRR4302543.4473981/1‑94 (MQ=60)
                                                                                    TTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCA           <  SRR4302543.6323606/94‑1 (MQ=60)
                                                                                      TACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAAT         >  SRR4302543.7356924/1‑94 (MQ=60)
                                                                                      TACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAAT         <  SRR4302543.3741857/94‑1 (MQ=60)
                                                                                      TACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAAT         <  SRR4302543.4724488/94‑1 (MQ=60)
                                                                                        CCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGG       <  SRR4302543.4646941/94‑1 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCActgga      >  SRR4302543.7716625/1‑89 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT      >  SRR4302543.2636112/1‑94 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT      >  SRR4302543.361310/1‑94 (MQ=60)
                                                                                           AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC    <  SRR4302543.2811943/94‑1 (MQ=60)
                                                                                           AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC    >  SRR4302543.7849167/1‑94 (MQ=60)
                                                                                           AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC    >  SRR4302543.6263199/1‑94 (MQ=60)
                                                                                           AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC    <  SRR4302543.6218526/94‑1 (MQ=60)
                                                                                            GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCCCCAGGACGCAAACGGGCAAACGGGCCAATGGTACA   <  SRR4302543.7396331/94‑1 (MQ=60)
                                                                                            GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA   <  SRR4302543.6802178/94‑1 (MQ=60)
                                                                                            GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA   >  SRR4302543.1021376/1‑94 (MQ=60)
                                                                                             GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  <  SRR4302543.587217/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  >  NC_000913/3911674‑3911860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: