Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,918,184 |
G→A |
A111A (GCC→GCT) |
atpF ← |
membrane‑bound ATP synthase, F0 sector, subunit b |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,918,184 | 0 | G | A | 100.0%
| 955.6
/ NA
| 264 | A111A (GCC→GCT) | atpF | membrane‑bound ATP synthase, F0 sector, subunit b |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (153/111); total (153/111) |
Only 100 of 269 total aligned reads displayed.
ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG > NC_000913/3918094‑3918273
|
cACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTc > 1:1678605/1‑93 (MQ=255)
cACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTc < 1:3890662/93‑1 (MQ=255)
ggAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAt > 2:3386827/1‑93 (MQ=255)
gAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAtt > 1:1109361/1‑93 (MQ=255)
aCGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTc > 1:4629576/1‑93 (MQ=255)
aCGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTc < 1:4500363/93‑1 (MQ=255)
aCGTTCGATGAGCTTCTCGGCGCCAGCAACAGCCAGGAGAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTc < 1:2280469/93‑1 (MQ=255)
cGTTCAATGATCTTCTCGGCTCCAGCAACAGCCAAGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTCCAATTTcc < 2:1036706/93‑1 (MQ=255)
gTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcg < 1:3524428/93‑1 (MQ=255)
gTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcg > 2:2434606/1‑93 (MQ=255)
gTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGAGCACGTTTACGCTCAGCTTCAATTTCcg > 2:2148218/1‑93 (MQ=255)
ttCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgc > 1:4190362/1‑93 (MQ=255)
tCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcc > 1:3329443/1‑93 (MQ=255)
gatgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctg > 1:4336765/1‑93 (MQ=255)
atgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgc > 1:3677358/1‑93 (MQ=255)
atgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgc < 2:3776545/93‑1 (MQ=255)
atgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgc < 2:4245887/93‑1 (MQ=255)
tgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcg > 2:1084368/1‑93 (MQ=255)
tgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcg > 1:1252777/1‑93 (MQ=255)
tgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcg > 1:4282862/1‑93 (MQ=255)
tgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcg > 2:1534136/1‑93 (MQ=255)
tgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcg > 2:1702234/1‑93 (MQ=255)
tatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACCCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgc < 2:1361014/92‑1 (MQ=255)
gatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgc > 1:2910779/1‑93 (MQ=255)
atCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgcc < 1:219971/93‑1 (MQ=255)
tcttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgcct < 1:1545699/93‑1 (MQ=255)
cttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgcctg < 1:4144368/93‑1 (MQ=255)
cttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgcctg < 2:2933685/93‑1 (MQ=255)
ttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTgg < 2:2657032/93‑1 (MQ=255)
ttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTgg < 1:3807829/93‑1 (MQ=255)
tctcGGCGCCAGCAACACCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTggg > 2:31073/1‑93 (MQ=255)
tcGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGcc < 1:3924627/93‑1 (MQ=255)
cGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGccc > 1:3563052/1‑92 (MQ=255)
gcgcCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACg < 1:1876343/93‑1 (MQ=255)
cgcCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGa < 2:2806114/93‑1 (MQ=255)
gcCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAt < 1:2427263/93‑1 (MQ=255)
ccAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAtt < 1:879135/93‑1 (MQ=255)
ccAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAtt > 1:2516331/1‑93 (MQ=255)
cAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAttt > 2:2373840/1‑93 (MQ=255)
cAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAttt > 1:2723210/1‑93 (MQ=255)
cAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAttt < 1:2545920/93‑1 (MQ=255)
aGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAtttt < 1:2961720/93‑1 (MQ=255)
gCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTa > 2:4635949/1‑93 (MQ=255)
cAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAg < 2:565913/93‑1 (MQ=255)
cAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAc < 1:4565794/93‑1 (MQ=255)
cAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAc < 2:3932721/93‑1 (MQ=255)
aGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACg < 1:2218632/93‑1 (MQ=255)
ccAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGtt > 1:4118470/1‑93 (MQ=255)
ccAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGtt > 1:403319/1‑93 (MQ=255)
ccAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGtt < 2:20753/93‑1 (MQ=255)
cAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTc > 2:3169403/1‑93 (MQ=255)
aGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTcc > 2:3487582/1‑93 (MQ=255)
ggATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCt > 2:1954957/1‑93 (MQ=255)
ggATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCt > 1:4398562/1‑93 (MQ=255)
ggATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCt > 2:1310440/1‑93 (MQ=255)
ggATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCt > 1:3015537/1‑93 (MQ=255)
ggATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCt > 2:4330630/1‑93 (MQ=255)
gATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTg < 1:1803377/93‑1 (MQ=255)
gATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTg > 2:2457975/1‑93 (MQ=255)
tAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGtt > 2:3642485/1‑93 (MQ=255)
tAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGtt > 2:1453751/1‑93 (MQ=255)
tAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGtt > 1:2085847/1‑93 (MQ=255)
aaCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTGGTACGTTCCTGTTCTGc > 1:2253148/1‑93 (MQ=255)
aaCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGATCCTGTTCTGc > 1:493575/1‑93 (MQ=255)
aCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTCCCTGTTCTGcc < 1:2048654/93‑1 (MQ=255)
aCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGCTCCTGTTCTGcc > 2:3575197/1‑93 (MQ=255)
cTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCt < 2:3618567/93‑1 (MQ=255)
ttGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTc > 2:4684231/1‑93 (MQ=255)
ttGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTc < 1:1740238/93‑1 (MQ=255)
tGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCa > 1:1531256/1‑93 (MQ=255)
gCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGACTCAg > 1:1992654/1‑93 (MQ=255)
cTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGc < 2:1574542/93‑1 (MQ=255)
cTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGc < 2:2845276/93‑1 (MQ=255)
ttACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCt < 1:1647462/93‑1 (MQ=255)
tACGCAGCTCTTCACGGGCATGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCtt > 1:1696128/1‑93 (MQ=255)
gCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCg > 1:3143702/1‑93 (MQ=255)
gCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTAAGCTTTCg > 2:812433/1‑93 (MQ=255)
cgCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTGCCTGTTCTGCCTCAGCTTTCGCt < 2:3017907/92‑1 (MQ=255)
aGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCt > 1:3047095/1‑93 (MQ=255)
gCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCtt > 2:2226292/1‑93 (MQ=255)
gCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCtt > 2:2543347/1‑93 (MQ=255)
gCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCtt > 1:2866331/1‑93 (MQ=255)
ctTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGt < 1:3432600/93‑1 (MQ=255)
ctTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGt > 1:3091772/1‑93 (MQ=255)
ttCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTc > 2:1775323/1‑93 (MQ=255)
ttCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTc < 2:3884879/93‑1 (MQ=255)
cACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCa < 1:1038953/93‑1 (MQ=255)
aCGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAg > 1:691406/1‑93 (MQ=255)
ggCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAt > 1:67038/1‑93 (MQ=255)
gCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATc < 2:184317/93‑1 (MQ=255)
gCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATc < 2:690933/93‑1 (MQ=255)
cACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCt > 2:2833640/1‑93 (MQ=255)
aCGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTg < 2:258742/93‑1 (MQ=255)
aCGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTg > 2:3340897/1‑93 (MQ=255)
gTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTTTTACGTTCCTGTTCTGCTTCAGCTTTCGCTTCGTCCAGAATCTGCg > 1:4686619/1‑93 (MQ=255)
ttACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAg < 1:3242956/93‑1 (MQ=255)
tACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAgc > 2:2028603/1‑93 (MQ=255)
cGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAgcgg > 2:19166/1‑93 (MQ=255)
gCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAgcggc < 2:382405/93‑1 (MQ=255)
cTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAgcggcg > 1:4445919/1‑93 (MQ=255)
|
ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG > NC_000913/3918094‑3918273
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTG > NC_000913/3918092‑3918277
|
TCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAG < SRR4302535.3399597/94‑1 (MQ=60)
TCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAG > SRR4302535.1196808/1‑94 (MQ=60)
CATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGC < SRR4302535.3531672/94‑1 (MQ=60)
CATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGC > SRR4302535.4384273/1‑94 (MQ=60)
ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT > SRR4302535.3690778/1‑94 (MQ=60)
ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT > SRR4302535.1377251/1‑94 (MQ=60)
CCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTC > SRR4302535.1690759/1‑94 (MQ=60)
CACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCA > SRR4302535.279353/1‑94 (MQ=60)
CACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCA < SRR4302535.3917340/94‑1 (MQ=60)
CGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAT < SRR4302535.2800718/94‑1 (MQ=60)
CGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAT < SRR4302535.310973/94‑1 (MQ=60)
CGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAT > SRR4302535.683283/1‑94 (MQ=60)
CGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAT < SRR4302535.490841/94‑1 (MQ=60)
GGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATT < SRR4302535.3105754/94‑1 (MQ=60)
GGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATT < SRR4302535.4449745/94‑1 (MQ=60)
GGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATT > SRR4302535.1117283/1‑94 (MQ=60)
AACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTC > SRR4302535.4660992/1‑94 (MQ=60)
ACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC < SRR4302535.2296862/94‑1 (MQ=60)
ACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC < SRR4302535.4531272/94‑1 (MQ=60)
ACGTTCGATGATCCTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC < SRR4302535.965721/94‑1 (MQ=60)
ACGTTCGATGAGCTTCTCGGCGCCAGCAACAGCCAGGAGAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC < SRR4302535.2296762/94‑1 (MQ=60)
CGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCG < SRR4302535.4007652/94‑1 (MQ=60)
CGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCG > SRR4302535.3567400/1‑94 (MQ=60)
GTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGC < SRR4302535.3548906/94‑1 (MQ=60)
GTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGC > SRR4302535.4219041/1‑94 (MQ=60)
TTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCC > SRR4302535.3352606/1‑94 (MQ=60)
TCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCT < SRR4302535.2274801/94‑1 (MQ=60)
CGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTG > SRR4302535.4366427/1‑94 (MQ=60)
GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC > SRR4302535.2560913/1‑94 (MQ=60)
GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC > SRR4302535.3702816/1‑94 (MQ=60)
GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC > SRR4302535.1167210/1‑94 (MQ=60)
GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC > SRR4302535.4046110/1‑94 (MQ=60)
ATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCG > SRR4302535.4312161/1‑94 (MQ=60)
ATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCG > SRR4302535.1261734/1‑94 (MQ=60)
TGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGC > SRR4302535.2931340/1‑94 (MQ=60)
GATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCC < SRR4302535.3488121/94‑1 (MQ=60)
ATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCT < SRR4302535.2225478/94‑1 (MQ=60)
ATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCT < SRR4302535.221485/94‑1 (MQ=60)
TCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTG < SRR4302535.1561959/94‑1 (MQ=60)
TCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTG < SRR4302535.1556830/94‑1 (MQ=60)
CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG < SRR4302535.4172748/94‑1 (MQ=60)
CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG < SRR4302535.2220750/94‑1 (MQ=60)
CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG > SRR4302535.4574041/1‑94 (MQ=60)
CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG > SRR4302535.2974280/1‑94 (MQ=60)
TTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGG < SRR4302535.3834093/94‑1 (MQ=60)
TTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGG < SRR4302535.380941/94‑1 (MQ=60)
TTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGG < SRR4302535.4151637/94‑1 (MQ=60)
TCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGC > SRR4302535.17388/1‑94 (MQ=60)
CTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCC > SRR4302535.1745608/1‑94 (MQ=60)
TCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCC > SRR4302535.3587755/1‑94 (MQ=60)
TCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCA < SRR4302535.2897784/94‑1 (MQ=60)
TCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCA < SRR4302535.3951444/94‑1 (MQ=60)
GCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGA < SRR4302535.1889855/94‑1 (MQ=60)
GCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGA > SRR4302535.3183711/1‑94 (MQ=60)
CGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAT > SRR4302535.3785444/1‑94 (MQ=60)
GCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATT < SRR4302535.2444754/94‑1 (MQ=60)
GCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATT > SRR4302535.2534469/1‑94 (MQ=60)
GCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATT < SRR4302535.3295106/94‑1 (MQ=60)
CCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTT < SRR4302535.885361/94‑1 (MQ=60)
CCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTT > SRR4302535.2742662/1‑94 (MQ=60)
CCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTT > SRR4302535.4355693/1‑94 (MQ=60)
CAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTT < SRR4302535.2564245/94‑1 (MQ=60)
AGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTA < SRR4302535.1484877/94‑1 (MQ=60)
AGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTA > SRR4302535.586847/1‑94 (MQ=60)
AGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTA < SRR4302535.2982509/94‑1 (MQ=60)
GCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAG > SRR4302535.1883436/1‑94 (MQ=60)
CAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGT > SRR4302535.484950/1‑94 (MQ=60)
AACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTA < SRR4302535.1802312/94‑1 (MQ=60)
ACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAC < SRR4302535.225311/94‑1 (MQ=60)
ACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAC < SRR4302535.2304684/94‑1 (MQ=60)
CAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACG < SRR4302535.2702810/94‑1 (MQ=60)
CAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACG < SRR4302535.4596943/94‑1 (MQ=60)
AGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGT > SRR4302535.78676/1‑94 (MQ=60)
AGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGT < SRR4302535.2234421/94‑1 (MQ=60)
GCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTT > SRR4302535.406145/1‑94 (MQ=60)
GCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTT > SRR4302535.3043741/1‑94 (MQ=60)
GCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTT > SRR4302535.4146657/1‑94 (MQ=60)
CCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTC > SRR4302535.1662767/1‑94 (MQ=60)
CCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTC > SRR4302535.1902568/1‑94 (MQ=60)
CCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTC > SRR4302535.336461/1‑94 (MQ=60)
AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT > SRR4302535.4488061/1‑94 (MQ=60)
AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT > SRR4302535.1694227/1‑94 (MQ=60)
AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT > SRR4302535.3926575/1‑94 (MQ=60)
AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT > SRR4302535.4428668/1‑94 (MQ=60)
AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT > SRR4302535.3036669/1‑94 (MQ=60)
AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT > SRR4302535.2069227/1‑94 (MQ=60)
AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT < SRR4302535.4397508/94‑1 (MQ=60)
GATCGCAATTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGT < SRR4302535.2041860/94‑1 (MQ=60)
GATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGT < SRR4302535.726347/94‑1 (MQ=60)
GATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGT < SRR4302535.1816411/94‑1 (MQ=60)
ATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTT > SRR4302535.3924843/1‑94 (MQ=60)
ATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTT > SRR4302535.2100868/1‑94 (MQ=60)
AGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCT > SRR4302535.1978121/1‑94 (MQ=60)
GCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCTGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTG < SRR4302535.3410904/94‑1 (MQ=60)
CAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTGGTACGTTCCTGTTCTGC > SRR4302535.2269196/1‑94 (MQ=60)
CAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGC > SRR4302535.2260114/1‑94 (MQ=60)
CAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGC < SRR4302535.3240616/94‑1 (MQ=60)
CAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGATCCTGTTCTGC > SRR4302535.497036/1‑94 (MQ=60)
AACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCC > SRR4302535.1619365/1‑94 (MQ=60)
ACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGGCACGATTTTAGTACGTTCCTGTTCTGCCT > SRR4302535.2127766/1‑94 (MQ=60)
ACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTCCCTGTTCTGCCT < SRR4302535.2063403/94‑1 (MQ=60)
CTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCTCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTC < SRR4302535.2527093/94‑1 (MQ=60)
CTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTCCAATTTCCGCCTGCGCCTGGGCCACGATTTTGGTACGTTCCTGTTCTGCCTC > SRR4302535.3138868/1‑94 (MQ=60)
TTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCA > SRR4302535.1542287/1‑94 (MQ=60)
TTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCA < SRR4302535.1752815/94‑1 (MQ=60)
TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG < SRR4302535.4146717/94‑1 (MQ=60)
TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG > SRR4302535.1077337/1‑94 (MQ=60)
TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG > SRR4302535.2465979/1‑94 (MQ=60)
TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG < SRR4302535.3157841/94‑1 (MQ=60)
TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGACTCAG > SRR4302535.2007000/1‑94 (MQ=60)
GCTTACGCAGCTCTTCACGGGCCCGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGC < SRR4302535.180849/94‑1 (MQ=60)
CTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCT > SRR4302535.2999924/1‑94 (MQ=60)
TTACGCAGCTCTTCACGGGCATGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTT > SRR4302535.1708386/1‑94 (MQ=60)
TTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTT < SRR4302535.1659372/94‑1 (MQ=60)
TACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTT < SRR4302535.4181654/94‑1 (MQ=60)
ACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTC < SRR4302535.3011738/94‑1 (MQ=60)
CGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCG < SRR4302535.4630781/94‑1 (MQ=60)
CGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCG > SRR4302535.3165571/1‑94 (MQ=60)
CAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCT > SRR4302535.4077650/1‑94 (MQ=60)
CAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCT > SRR4302535.3068442/1‑94 (MQ=60)
AGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTT < SRR4302535.271511/94‑1 (MQ=60)
AGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTT > SRR4302535.2886635/1‑94 (MQ=60)
TCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGT > SRR4302535.3113302/1‑94 (MQ=60)
CTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTC > SRR4302535.4670839/1‑94 (MQ=60)
CTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTC < SRR4302535.3456454/94‑1 (MQ=60)
TTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCC > SRR4302535.4624709/1‑94 (MQ=60)
cccCGGGCTCGTTTACCCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTCCCTGTTCTGCCTCAGCTTTCGCTTCGTCCA < SRR4302535.458789/91‑1 (MQ=60)
TCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCA < SRR4302535.1215503/94‑1 (MQ=60)
CACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAG < SRR4302535.1046326/94‑1 (MQ=60)
CACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAG > SRR4302535.1664531/1‑94 (MQ=60)
CACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAG > SRR4302535.696250/1‑94 (MQ=60)
CGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAA > SRR4302535.3878761/1‑94 (MQ=60)
GGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAT > SRR4302535.2187292/1‑94 (MQ=60)
GGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAT > SRR4302535.67538/1‑94 (MQ=60)
GGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAT > SRR4302535.4362231/1‑94 (MQ=60)
GGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATC < SRR4302535.4219423/94‑1 (MQ=60)
GCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCT > SRR4302535.3477483/1‑94 (MQ=60)
GCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCT > SRR4302535.2007309/1‑94 (MQ=60)
CTCGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTG < SRR4302535.4217461/94‑1 (MQ=60)
CACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTG > SRR4302535.4431896/1‑94 (MQ=60)
CGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTTTTACGTTCCTGTTCTGCTTCAGCTTTCGCTTCGTCCAGAATCTGCG > SRR4302535.4718399/1‑94 (MQ=60)
CGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCG < SRR4302535.528039/94‑1 (MQ=60)
GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA > SRR4302535.3637249/1‑94 (MQ=60)
TTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGC < SRR4302535.3265483/94‑1 (MQ=60)
ACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGG > SRR4302535.154289/1‑94 (MQ=60)
CGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGC < SRR4302535.2954377/94‑1 (MQ=60)
GCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG > SRR4302535.4476410/1‑94 (MQ=60)
CTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGC > SRR4302535.55658/1‑94 (MQ=60)
TCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCT < SRR4302535.782459/94‑1 (MQ=60)
TCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCT < SRR4302535.2690509/94‑1 (MQ=60)
TCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGCTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCT < SRR4302535.3317368/94‑1 (MQ=60)
AGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTG > SRR4302535.1614993/1‑94 (MQ=60)
AGCTTCAATTCCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTG < SRR4302535.2207722/94‑1 (MQ=60)
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TCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTG > NC_000913/3918092‑3918277
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
