Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,918,184 G→A A111A (GCC→GCT)  atpF ← membrane‑bound ATP synthase, F0 sector, subunit b

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,918,1840GA98.5% 1435.9 / ‑1.0 405A111A (GCC→GCT) atpFmembrane‑bound ATP synthase, F0 sector, subunit b
Reads supporting (aligned to +/- strand):  ref base G (5/1);  new base A (228/171);  total (233/172)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 416 total aligned reads displayed.

ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG  >  NC_000913/3918094‑3918273
                                                                                          |                                                                                         
 tCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCt                                                                                        <  2:7092370/93‑1 (MQ=255)
 tCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCt                                                                                        >  1:1634267/1‑93 (MQ=255)
 tCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCt                                                                                        >  2:6367738/1‑93 (MQ=255)
 tCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGAAGCTCTTCACGGGCACGTTTACGCTCAGCt                                                                                        >  1:386921/1‑93 (MQ=255)
 tCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTGTTTTACCCAGCTCTTCACGGGCACGTTTACGCTCAGCt                                                                                        <  2:242827/93‑1 (MQ=255)
   cACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTc                                                                                      <  2:904291/93‑1 (MQ=255)
   cACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTc                                                                                      >  1:23896/1‑93 (MQ=255)
   cACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTc                                                                                      >  1:2051000/1‑93 (MQ=255)
     cGGAACGTTCGATGATCTTCTCTGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCaa                                                                                    >  2:7272556/1‑93 (MQ=255)
     cGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCaa                                                                                    <  2:4949574/93‑1 (MQ=255)
      ggAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAt                                                                                   <  1:7903806/93‑1 (MQ=255)
      ggAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAt                                                                                   >  1:4423956/1‑93 (MQ=255)
        aaCGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAttt                                                                                 <  2:4184753/93‑1 (MQ=255)
        aaCGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAttt                                                                                 >  1:1323517/1‑93 (MQ=255)
          cGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTcc                                                                               <  1:275048/93‑1 (MQ=255)
          cGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTcc                                                                               <  2:4897838/93‑1 (MQ=255)
           gTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcg                                                                              >  2:5509427/1‑93 (MQ=255)
           gTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcg                                                                              >  1:3273869/1‑93 (MQ=255)
            ttCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgc                                                                             >  1:86643/1‑93 (MQ=255)
             tCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcc                                                                            <  2:6750301/93‑1 (MQ=255)
             tCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcc                                                                            <  2:578116/93‑1 (MQ=255)
             tCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcc                                                                            <  1:4004608/93‑1 (MQ=255)
              cGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcct                                                                           <  2:3240512/93‑1 (MQ=255)
                atgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgc                                                                         >  1:67919/1‑93 (MQ=255)
                atgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgc                                                                         >  2:2613619/1‑93 (MQ=255)
                 tgatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcg                                                                        >  1:6757784/1‑93 (MQ=255)
                  gatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgc                                                                       <  1:3479581/93‑1 (MQ=255)
                  gatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgc                                                                       <  2:2131244/93‑1 (MQ=255)
                  gatCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgc                                                                       <  2:6953890/93‑1 (MQ=255)
                   atCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgcc                                                                      <  1:1460079/93‑1 (MQ=255)
                    tcttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCcgcctgcgcct                                                                     >  1:4820170/1‑93 (MQ=255)
                      ttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTgg                                                                   <  2:5042722/93‑1 (MQ=255)
                      ttctCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTgg                                                                   <  2:3378261/93‑1 (MQ=255)
                       tctcGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTggg                                                                  >  1:3658755/1‑93 (MQ=255)
                        ctcGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGc                                                                 >  1:2559805/1‑93 (MQ=255)
                         tcGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACAGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGcc                                                                >  1:2609827/1‑93 (MQ=255)
                             cgcCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGa                                                            <  1:6375942/93‑1 (MQ=255)
                              gcCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAt                                                           >  1:1216956/1‑93 (MQ=255)
                                  gCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTa                                                       >  2:311279/1‑93 (MQ=255)
                                   cAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAg                                                      <  1:920598/93‑1 (MQ=255)
                                   cAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAg                                                      <  2:5916977/93‑1 (MQ=255)
                                      cAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAc                                                   >  1:5779705/1‑93 (MQ=255)
                                      cAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAc                                                   >  1:555187/1‑93 (MQ=255)
                                        gCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGt                                                 >  1:4342853/1‑93 (MQ=255)
                                        gCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGt                                                 >  2:6262421/1‑93 (MQ=255)
                                           aGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTcc                                              >  2:1370585/1‑93 (MQ=255)
                                            ggATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCt                                             >  1:3334457/1‑93 (MQ=255)
                                            ggATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCt                                             <  1:528052/93‑1 (MQ=255)
                                             gATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTg                                            >  2:3969281/1‑93 (MQ=255)
                                             gATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTg                                            >  2:1887104/1‑93 (MQ=255)
                                             gATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTg                                            >  1:4748658/1‑93 (MQ=255)
                                              aTAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGt                                           >  1:5058537/1‑93 (MQ=255)
                                              aTAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGt                                           >  1:7101108/1‑93 (MQ=255)
                                               tAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGtt                                          >  2:5668784/1‑93 (MQ=255)
                                                aGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTc                                         <  1:2131608/93‑1 (MQ=255)
                                                   aaCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGc                                      >  1:1775727/1‑93 (MQ=255)
                                                   aaCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGc                                      >  1:62716/1‑93 (MQ=255)
                                                   aaCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATCTTAGTACGTTCCTGTTCTGc                                      >  2:1006219/1‑93 (MQ=255)
                                                    aCTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGcc                                     >  2:4832724/1‑93 (MQ=255)
                                                     cTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCt                                    >  2:3645529/1‑93 (MQ=255)
                                                       tGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCa                                  <  2:7172162/93‑1 (MQ=255)
                                                       tGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCa                                  <  1:6596056/93‑1 (MQ=255)
                                                        gCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAg                                 >  1:750601/1‑93 (MQ=255)
                                                         cTTACGCAGCTCTTCACGGGCCCGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGc                                <  2:2691319/93‑1 (MQ=255)
                                                           tACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCtt                              >  1:3158675/1‑93 (MQ=255)
                                                           tACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCtt                              >  2:6528537/1‑93 (MQ=255)
                                                             cGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTc                            >  2:7722862/1‑93 (MQ=255)
                                                             cGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTc                            >  2:1063441/1‑93 (MQ=255)
                                                             cGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTc                            <  1:622749/93‑1 (MQ=255)
                                                              gCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCg                           >  2:4019611/1‑93 (MQ=255)
                                                               cAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGc                          <  1:1002480/93‑1 (MQ=255)
                                                               cAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGc                          <  2:1609800/93‑1 (MQ=255)
                                                               cAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGc                          >  2:5992384/1‑93 (MQ=255)
                                                                 gCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCtt                        >  1:4247101/1‑93 (MQ=255)
                                                                  ctctTCACGGGCACGTTTACGCTCAGCTTCAATATCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTc                       <  1:7615170/93‑1 (MQ=255)
                                                                   tctTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCg                      <  2:3807117/93‑1 (MQ=255)
                                                                   tctTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCg                      >  1:4100198/1‑93 (MQ=255)
                                                                     ttCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTc                    >  2:2033029/1‑93 (MQ=255)
                                                                     ttCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTc                    >  1:520023/1‑93 (MQ=255)
                                                                     ttCACGGGCACGTTTACGCTCAGCTTCAATTTCCCCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTc                    <  2:6100275/93‑1 (MQ=255)
                                                                      tCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTcc                   >  2:4458570/1‑93 (MQ=255)
                                                                       cACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCa                  >  2:6487398/1‑93 (MQ=255)
                                                                       cACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCa                  <  1:5681234/93‑1 (MQ=255)
                                                                       cACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCa                  <  1:7377099/93‑1 (MQ=255)
                                                                          gggCACTGTTACTCTCAGCGTAAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGaa               <  1:1096297/93‑1 (MQ=255)
                                                                          gggCACGTTTACGCTCAGCTTCAGTTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGaa               <  2:4302485/93‑1 (MQ=255)
                                                                          gggCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGaa               <  2:5125753/93‑1 (MQ=255)
                                                                           ggCACGTTTACTCTCATCTCTAATTTCCGCCTGCGCCTGGGCCACGAATTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAt              <  1:2941643/93‑1 (MQ=255)
                                                                           ggCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAt              <  2:2379772/93‑1 (MQ=255)
                                                                            gCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATc             <  2:5381672/93‑1 (MQ=255)
                                                                            gCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATc             <  2:3483823/93‑1 (MQ=255)
                                                                             cACGATTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTGGTCCAGAATCt            <  2:5014928/93‑1 (MQ=255)
                                                                              aCGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTg           >  2:469927/1‑93 (MQ=255)
                                                                               cGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGc          >  2:4980813/1‑93 (MQ=255)
                                                                                 tttACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGa        >  2:1711738/1‑93 (MQ=255)
                                                                                 tttACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGa        >  1:4894378/1‑93 (MQ=255)
                                                                                   tACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTGGCTTCGTCCAGAATCTGCGAgg      >  2:2256119/1‑92 (MQ=255)
                                                                                   tACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAgc      <  2:293458/93‑1 (MQ=255)
                                                                                   tACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAgc      <  1:285512/93‑1 (MQ=255)
                                                                                      gCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAgcggc   >  1:6053124/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCG  >  NC_000913/3918094‑3918273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 219 total aligned reads displayed.
TTCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTG  >  NC_000913/3918091‑3918277
                                                                                             |                                                                                             
TTCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCA                                                                                               >  SRR4302543.1041714/1‑94 (MQ=60)
TTCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCA                                                                                               >  SRR4302543.6120952/1‑94 (MQ=60)
TTCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCA                                                                                               >  SRR4302543.7129874/1‑94 (MQ=60)
 TCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAG                                                                                              <  SRR4302543.6615290/94‑1 (MQ=60)
 TCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAG                                                                                              <  SRR4302543.4680076/94‑1 (MQ=60)
  CATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGC                                                                                             >  SRR4302543.3013508/1‑94 (MQ=60)
  CATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGC                                                                                             >  SRR4302543.2096087/1‑94 (MQ=60)
  CATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGC                                                                                             >  SRR4302543.2096088/1‑94 (MQ=60)
  CATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGC                                                                                             >  SRR4302543.4757901/1‑94 (MQ=60)
   ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT                                                                                            <  SRR4302543.6845085/94‑1 (MQ=60)
   ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT                                                                                            >  SRR4302543.955495/1‑94 (MQ=60)
   ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT                                                                                            >  SRR4302543.2217468/1‑94 (MQ=60)
   ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT                                                                                            >  SRR4302543.44128/1‑94 (MQ=60)
   ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT                                                                                            >  SRR4302543.1648841/1‑94 (MQ=60)
   ATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGAAGCTCTTCACGGGCACGTTTACGCTCAGCT                                                                                            >  SRR4302543.390499/1‑94 (MQ=60)
   ATCCACGCAACGTTCGATGATCTTCTCGCCGCCAGCAACAGCCAGGATAGCAACTTGCTGACGCAGCTCTTCACGGGCACGTTTACGCTCAGCT                                                                                            <  SRR4302543.6845086/94‑1 (MQ=60)
     CCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTC                                                                                          >  SRR4302543.3272558/1‑94 (MQ=60)
     CCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTC                                                                                          >  SRR4302543.2069364/1‑94 (MQ=60)
     CCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTC                                                                                          >  SRR4302543.24114/1‑94 (MQ=60)
      CACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCA                                                                                         <  SRR4302543.2329941/94‑1 (MQ=60)
      CACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCA                                                                                         >  SRR4302543.5996449/1‑94 (MQ=60)
      CACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCA                                                                                         >  SRR4302543.5996450/1‑94 (MQ=60)
      CACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCA                                                                                         <  SRR4302543.2541302/94‑1 (MQ=60)
        CGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCTGCTTGAAT                                                                                       >  SRR4302543.1517811/1‑94 (MQ=60)
        CGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAAT                                                                                       >  SRR4302543.4464046/1‑94 (MQ=60)
         GGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATT                                                                                      <  SRR4302543.7978086/94‑1 (MQ=60)
         GGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATT                                                                                      >  SRR4302543.3081322/1‑94 (MQ=60)
         GGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATT                                                                                      >  SRR4302543.349693/1‑94 (MQ=60)
          GAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTT                                                                                     >  SRR4302543.1335269/1‑94 (MQ=60)
           AACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTC                                                                                    >  SRR4302543.6737897/1‑94 (MQ=60)
            ACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC                                                                                   >  SRR4302543.6123501/1‑94 (MQ=60)
            ACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC                                                                                   <  SRR4302543.7731091/94‑1 (MQ=60)
            ACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC                                                                                   <  SRR4302543.2647352/94‑1 (MQ=60)
            ACGGTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCC                                                                                   <  SRR4302543.2647351/94‑1 (MQ=60)
             CGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCG                                                                                  <  SRR4302543.277478/94‑1 (MQ=60)
             CGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCG                                                                                  >  SRR4302543.4831945/1‑94 (MQ=60)
             CGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCG                                                                                  >  SRR4302543.3303442/1‑94 (MQ=60)
              GTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGC                                                                                 >  SRR4302543.1071725/1‑94 (MQ=60)
              GTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGC                                                                                 >  SRR4302543.87440/1‑94 (MQ=60)
                 CGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTG                                                                              >  SRR4302543.1456098/1‑94 (MQ=60)
                  GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC                                                                             >  SRR4302543.1005844/1‑94 (MQ=60)
                  GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC                                                                             >  SRR4302543.68525/1‑94 (MQ=60)
                  GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC                                                                             >  SRR4302543.4413984/1‑94 (MQ=60)
                  GATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGC                                                                             >  SRR4302543.4413985/1‑94 (MQ=60)
                   ATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCG                                                                            >  SRR4302543.5612182/1‑94 (MQ=60)
                   ATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCG                                                                            <  SRR4302543.3133565/94‑1 (MQ=60)
                   ATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCG                                                                            >  SRR4302543.6736737/1‑94 (MQ=60)
                   ATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCG                                                                            >  SRR4302543.6821610/1‑94 (MQ=60)
                    TGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGC                                                                           >  SRR4302543.7426360/1‑94 (MQ=60)
                     GATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCC                                                                          <  SRR4302543.3510746/94‑1 (MQ=60)
                     GATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCC                                                                          >  SRR4302543.804179/1‑94 (MQ=60)
                      ATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCT                                                                         >  SRR4302543.255449/1‑94 (MQ=60)
                      ATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCT                                                                         >  SRR4302543.4864175/1‑94 (MQ=60)
                      ATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCT                                                                         <  SRR4302543.1473244/94‑1 (MQ=60)
                        CTTCTCGGCGCCAGCAACAGCCAGGATGGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG                                                                       <  SRR4302543.6749079/94‑1 (MQ=60)
                        CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG                                                                       <  SRR4302543.6958111/94‑1 (MQ=60)
                        CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG                                                                       >  SRR4302543.1123518/1‑94 (MQ=60)
                        CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGG                                                                       <  SRR4302543.7489253/94‑1 (MQ=60)
                        CTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGATTACGCTCGGCTTCAATTTCCGCCTGCGCCTGG                                                                       >  SRR4302543.7682434/1‑94 (MQ=60)
                         TTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGG                                                                      >  SRR4302543.3690886/1‑94 (MQ=60)
                         TTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGG                                                                      >  SRR4302543.3690885/1‑94 (MQ=60)
                          TCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGC                                                                     >  SRR4302543.2583195/1‑94 (MQ=60)
                           CTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCC                                                                    <  SRR4302543.4919560/94‑1 (MQ=60)
                           CTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACAGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCC                                                                    >  SRR4302543.2633522/1‑94 (MQ=60)
                            TCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCA                                                                   <  SRR4302543.372542/94‑1 (MQ=60)
                            TCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCA                                                                   <  SRR4302543.5560478/94‑1 (MQ=60)
                            CCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCA                                                                   <  SRR4302543.5560479/94‑1 (MQ=60)
                             CGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCAC                                                                  >  SRR4302543.6931537/1‑94 (MQ=60)
                              GGCGCCAGGAACAGCCAGGAGAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACG                                                                 <  SRR4302543.5781241/94‑1 (MQ=60)
                              GGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACG                                                                 <  SRR4302543.6314267/94‑1 (MQ=60)
                              GGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACG                                                                 <  SRR4302543.6286425/94‑1 (MQ=60)
                              GGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACG                                                                 <  SRR4302543.6286424/94‑1 (MQ=60)
                              GGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACG                                                                 >  SRR4302543.5813484/1‑94 (MQ=60)
                              GGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACG                                                                 <  SRR4302543.2204716/94‑1 (MQ=60)
                              GGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACG                                                                 >  SRR4302543.3187193/1‑94 (MQ=60)
                                CGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAT                                                               <  SRR4302543.6435929/94‑1 (MQ=60)
                                CGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGAT                                                               >  SRR4302543.1227889/1‑94 (MQ=60)
                                CGCCAGAAACACCCAGGATAGCAACTTCCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGAGCCTGGGCCACGAT                                                               <  SRR4302543.3986920/94‑1 (MQ=60)
                                  CCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGACACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTT                                                             >  SRR4302543.1997632/1‑94 (MQ=60)
                                   CAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTT                                                            <  SRR4302543.7593822/94‑1 (MQ=60)
                                   CAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTT                                                            >  SRR4302543.4188168/1‑94 (MQ=60)
                                    cgcccccgccaggctcgcagCTTGCTTCCGCAGCTCTTCCCGGGCCCGTTTACGCTCAGCTTCCATTTCCGCCTGCGCCTGGGCCACGATTTTA                                                           <  SRR4302543.7111807/74‑1 (MQ=60)
                                      CAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGT                                                         <  SRR4302543.2673117/94‑1 (MQ=60)
                                      CAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGT                                                         <  SRR4302543.928655/94‑1 (MQ=60)
                                       AACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTA                                                        >  SRR4302543.1438841/1‑94 (MQ=60)
                                       AACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTA                                                        >  SRR4302543.4565145/1‑94 (MQ=60)
                                        ACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAC                                                       >  SRR4302543.560287/1‑94 (MQ=60)
                                        ACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTAC                                                       >  SRR4302543.5832308/1‑94 (MQ=60)
                                         CAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACG                                                      <  SRR4302543.1857997/94‑1 (MQ=60)
                                          AGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGT                                                     >  SRR4302543.4382241/1‑94 (MQ=60)
                                          AGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGT                                                     >  SRR4302543.438641/1‑94 (MQ=60)
                                          AGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGT                                                     >  SRR4302543.1779417/1‑94 (MQ=60)
                                          AGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGT                                                     >  SRR4302543.2782387/1‑94 (MQ=60)
                                           GCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTT                                                    >  SRR4302543.5231904/1‑94 (MQ=60)
                                           GCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTT                                                    >  SRR4302543.2605378/1‑94 (MQ=60)
                                             CAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCC                                                  >  SRR4302543.3410028/1‑94 (MQ=60)
                                             CAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCAGCCTGCGCCTGGGCCACGATTTTAGTACGTTCC                                                  >  SRR4302543.7677509/1‑94 (MQ=60)
                                              AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT                                                 >  SRR4302543.3364506/1‑94 (MQ=60)
                                              AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT                                                 <  SRR4302543.7265914/94‑1 (MQ=60)
                                              AGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCT                                                 <  SRR4302543.260736/94‑1 (MQ=60)
                                               GGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTG                                                >  SRR4302543.5228610/1‑94 (MQ=60)
                                               GGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTG                                                <  SRR4302543.532937/94‑1 (MQ=60)
                                               GGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTG                                                >  SRR4302543.4792062/1‑94 (MQ=60)
                                               GGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTG                                                >  SRR4302543.7548564/1‑94 (MQ=60)
                                               GGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTG                                                <  SRR4302543.4105892/94‑1 (MQ=60)
                                                GATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGT                                               >  SRR4302543.3649755/1‑94 (MQ=60)
                                                GATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGT                                               >  SRR4302543.7170075/1‑94 (MQ=60)
                                                GATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGT                                               >  SRR4302543.5104512/1‑94 (MQ=60)
                                                 ATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTT                                              >  SRR4302543.1308119/1‑94 (MQ=60)
                                                 ATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTT                                              >  SRR4302543.1588944/1‑94 (MQ=60)
                                                   AGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCT                                            <  SRR4302543.1263395/94‑1 (MQ=60)
                                                   AGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCT                                            <  SRR4302543.2150690/94‑1 (MQ=60)
                                                   AGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCT                                            <  SRR4302543.4832981/94‑1 (MQ=60)
                                                   AGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCT                                            >  SRR4302543.6341027/1‑94 (MQ=60)
                                                    GCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTG                                           <  SRR4302543.6114259/94‑1 (MQ=60)
                                                     CAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGC                                          >  SRR4302543.1791594/1‑94 (MQ=60)
                                                     CAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGC                                          >  SRR4302543.63267/1‑94 (MQ=60)
                                                     CAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACCATTTTAGTACGTTCCTGTTCTGC                                          >  SRR4302543.1791593/1‑94 (MQ=60)
                                                      AACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCC                                         >  SRR4302543.1401341/1‑94 (MQ=60)
                                                       ACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCT                                        <  SRR4302543.4128777/94‑1 (MQ=60)
                                                       ACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCT                                        <  SRR4302543.4128779/94‑1 (MQ=60)
                                                         TTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCA                                      <  SRR4302543.7257946/94‑1 (MQ=60)
                                                          TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG                                     >  SRR4302543.3876311/1‑94 (MQ=60)
                                                          TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG                                     >  SRR4302543.757262/1‑94 (MQ=60)
                                                          TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG                                     <  SRR4302543.6658213/94‑1 (MQ=60)
                                                          TGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAG                                     <  SRR4302543.5322047/94‑1 (MQ=60)
                                                            CTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCT                                   <  SRR4302543.7743831/94‑1 (MQ=60)
                                                            CTTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGGTCCTGTTCTGCCTCAGCT                                   >  SRR4302543.4322153/1‑94 (MQ=60)
                                                             TTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTT                                  >  SRR4302543.3187114/1‑94 (MQ=60)
                                                             TTACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTT                                  <  SRR4302543.7477387/94‑1 (MQ=60)
                                                              TACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCGTGTTCTGCCTCAGCTTT                                 <  SRR4302543.249245/94‑1 (MQ=60)
                                                              TACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTT                                 <  SRR4302543.3341313/94‑1 (MQ=60)
                                                              TACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTT                                 >  SRR4302543.4883044/1‑94 (MQ=60)
                                                              TACGCAGCTCTTCACGGGCACGTCTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTT                                 <  SRR4302543.6367761/94‑1 (MQ=60)
                                                              TACGCAGCTCTTCACGGGCACATTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTT                                 <  SRR4302543.5147794/94‑1 (MQ=60)
                                                               ACGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTC                                <  SRR4302543.876723/94‑1 (MQ=60)
                                                                CGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCG                               <  SRR4302543.628453/94‑1 (MQ=60)
                                                                CGCAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCG                               >  SRR4302543.5057143/1‑94 (MQ=60)
                                                                 GCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGC                              >  SRR4302543.5247326/1‑94 (MQ=60)
                                                                  CAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCT                             <  SRR4302543.1011340/94‑1 (MQ=60)
                                                                  CAGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCT                             >  SRR4302543.3554710/1‑94 (MQ=60)
                                                                   AGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTT                            >  SRR4302543.6653294/1‑94 (MQ=60)
                                                                   AGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTT                            >  SRR4302543.4285640/1‑94 (MQ=60)
                                                                   AGCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTT                            >  SRR4302543.4285638/1‑94 (MQ=60)
                                                                    GCTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTC                           >  SRR4302543.1913310/1‑94 (MQ=60)
                                                                     CTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCG                          >  SRR4302543.2858012/1‑94 (MQ=60)
                                                                     CTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCG                          >  SRR4302543.4137051/1‑94 (MQ=60)
                                                                     CTCTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCG                          <  SRR4302543.4870941/94‑1 (MQ=60)
                                                                     CTCTTCACGGGCACGTTTACGCTCAGCTTCAATATCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCG                          <  SRR4302543.7687467/94‑1 (MQ=60)
                                                                       CTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTC                        >  SRR4302543.2810679/1‑94 (MQ=60)
                                                                       CTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTC                        >  SRR4302543.524847/1‑94 (MQ=60)
                                                                       CTTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTC                        >  SRR4302543.1078850/1‑94 (MQ=60)
                                                                        TTCACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCC                       <  SRR4302543.5612368/94‑1 (MQ=60)
                                                                          CACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAG                     <  SRR4302543.5100668/94‑1 (MQ=60)
                                                                          CACGGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAG                     <  SRR4302543.5733090/94‑1 (MQ=60)
                                                                             GGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAT                  <  SRR4302543.102993/94‑1 (MQ=60)
                                                                             GGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAT                  >  SRR4302543.2806816/1‑94 (MQ=60)
                                                                             GGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAT                  <  SRR4302543.3922986/94‑1 (MQ=60)
                                                                             GGGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAAT                  <  SRR4302543.1106167/94‑1 (MQ=60)
                                                                              GGCACGTTTACTCTCATCTCTAATTTCCGCCTGCGCCTGGGCCACGAATTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATC                 <  SRR4302543.2968352/94‑1 (MQ=60)
                                                                              GGCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATC                 <  SRR4302543.2968351/94‑1 (MQ=60)
                                                                               GCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCTCTTCGTCCAGAATCT                >  SRR4302543.2941885/1‑94 (MQ=60)
                                                                               GCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCT                <  SRR4302543.7467956/94‑1 (MQ=60)
                                                                               GCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCT                >  SRR4302543.3428782/1‑94 (MQ=60)
                                                                               GCACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCT                <  SRR4302543.1479645/94‑1 (MQ=60)
                                                                                CACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTG               >  SRR4302543.3962682/1‑94 (MQ=60)
                                                                                CACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTG               <  SRR4302543.1130732/94‑1 (MQ=60)
                                                                                CACGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTC               >  SRR4302543.5646972/1‑94 (MQ=60)
                                                                                  CGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCG             <  SRR4302543.1799668/94‑1 (MQ=60)
                                                                                  CGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCG             >  SRR4302543.6865787/1‑94 (MQ=60)
                                                                                  CGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCG             >  SRR4302543.5294629/1‑94 (MQ=60)
                                                                                  CGTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCG             >  SRR4302543.3547323/1‑94 (MQ=60)
                                                                                   GTTTACGTTCAGCTTAATTTTCCGCCTGCTCCTGGGCCAAGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            <  SRR4302543.6369104/94‑1 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.6500565/1‑94 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.5571011/1‑94 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.799975/1‑94 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            <  SRR4302543.822028/94‑1 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.874946/1‑94 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.4938992/1‑94 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.3870397/1‑94 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.4334730/1‑94 (MQ=60)
                                                                                   GTTTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGA            >  SRR4302543.6382057/1‑94 (MQ=60)
                                                                                     TTACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGC          <  SRR4302543.890083/94‑1 (MQ=60)
                                                                                      TACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCG         <  SRR4302543.4195193/94‑1 (MQ=60)
                                                                                      TACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCG         <  SRR4302543.288051/94‑1 (MQ=60)
                                                                                       ACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGG        >  SRR4302543.3343031/1‑94 (MQ=60)
                                                                                       ACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGG        >  SRR4302543.3210752/1‑94 (MQ=60)
                                                                                       ACGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGG        >  SRR4302543.4845542/1‑94 (MQ=60)
                                                                                        CGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGC       >  SRR4302543.5988073/1‑94 (MQ=60)
                                                                                        CGCTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGC       >  SRR4302543.6110425/1‑94 (MQ=60)
                                                                                          CTCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGC     >  SRR4302543.4690885/1‑94 (MQ=60)
                                                                                           TCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCT    >  SRR4302543.5628237/1‑94 (MQ=60)
                                                                                           TCAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCT    <  SRR4302543.6069020/94‑1 (MQ=60)
                                                                                            CAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTT   >  SRR4302543.1314387/1‑94 (MQ=60)
                                                                                            CAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTT   <  SRR4302543.467549/94‑1 (MQ=60)
                                                                                            CAGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTAGCTTCGTCCAGAATCTGCGAGCGGCGCTT   >  SRR4302543.3987212/1‑94 (MQ=60)
                                                                                             AGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTG  >  SRR4302543.6908720/1‑94 (MQ=60)
                                                                                             AGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTG  >  SRR4302543.4433300/1‑94 (MQ=60)
                                                                                             AGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTG  >  SRR4302543.5517798/1‑94 (MQ=60)
                                                                                             AGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGCTTG  >  SRR4302543.388310/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTCATCCACGGAACGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTG  >  NC_000913/3918091‑3918277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑