Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,992,862 |
A→G |
Q164R (CAG→CGG) |
dapF → |
diaminopimelate epimerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,992,862 | 0 | A | G | 100.0%
| 650.1
/ NA
| 209 | Q164R (CAG→CGG) | dapF | diaminopimelate epimerase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/105); total (104/105) |
Only 100 of 220 total aligned reads displayed.
AAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTT > NC_000913/3992774‑3992951
|
aaaGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTc > 1:4575049/1‑93 (MQ=255)
gCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgat > 2:1496326/1‑93 (MQ=255)
gCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgat > 1:1180412/1‑93 (MQ=255)
ggAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgatga > 1:2270269/1‑93 (MQ=255)
ggAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgatga > 2:1774658/1‑93 (MQ=255)
gAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCgatgat > 1:444033/1‑93 (MQ=255)
aaaaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGatgatg < 1:4144589/93‑1 (MQ=255)
aaaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGt < 2:2733204/93‑1 (MQ=255)
aaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCTTGATTCGGGTCGATGATGTc < 2:4513759/93‑1 (MQ=255)
aaGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTc > 2:4443853/1‑93 (MQ=255)
aGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGTATTGCGTGATTCGGGTCGATGATGTCg < 1:2661215/93‑1 (MQ=255)
gACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGa > 2:3269754/1‑93 (MQ=255)
gccTATATTATGCGCGTCGGCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGTAAATCCCCATTGCGGGATTCGGGTCGATGATGTCGAt < 2:651888/92‑1 (MQ=255)
aCCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGaa > 1:2237331/1‑92 (MQ=255)
ccTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCACTGCGTGATTCGGGTCGCTGATGTCGATa > 2:318164/1‑93 (MQ=255)
cTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAc > 2:838944/1‑93 (MQ=255)
tataTTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAcc > 2:2029943/1‑93 (MQ=255)
tattatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgc < 2:1120520/93‑1 (MQ=255)
attatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgcg > 1:2827271/1‑93 (MQ=255)
attatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACcgcg > 2:3592432/1‑93 (MQ=255)
tatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCgcggc > 1:3255463/1‑93 (MQ=255)
tatGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCgcggc > 1:2981370/1‑93 (MQ=255)
gcgcgcCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGt > 2:1956403/1‑93 (MQ=255)
cgccgcCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTata < 2:4086985/93‑3 (MQ=255)
gccgccGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGaa < 2:1907517/93‑1 (MQ=255)
ccgccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGaag < 1:3396985/93‑2 (MQ=255)
cgccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAgcagc > 1:318828/1‑89 (MQ=255)
cgccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGaagc < 1:1348420/93‑3 (MQ=255)
ccgAGCAGACAGTCTTATGCGGCGTGGTGTCGATAGAAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATCCCGCGGCGGTAGAAgcgc < 2:3319067/93‑1 (MQ=255)
cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt > 2:2566355/1‑93 (MQ=255)
gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt < 2:1311447/93‑1 (MQ=255)
gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt > 2:1519641/1‑93 (MQ=255)
cAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGt < 1:296783/93‑1 (MQ=255)
cAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGt < 2:2955804/93‑1 (MQ=255)
aGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTc < 2:2535665/93‑1 (MQ=255)
aGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTc < 1:1501045/93‑1 (MQ=255)
gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc > 1:539785/1‑93 (MQ=255)
gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc > 2:352609/1‑93 (MQ=255)
gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc > 2:3794960/1‑93 (MQ=255)
aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt < 1:2204575/93‑1 (MQ=255)
cAATCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTg < 1:655578/93‑1 (MQ=255)
aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt < 1:1782363/93‑1 (MQ=255)
aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt < 2:2192576/93‑1 (MQ=255)
aaTCTTAGGCGGCGTTGTGTCGATGGGAAATCCGCCTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt < 1:55036/93‑1 (MQ=255)
aTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGtt > 1:3335261/1‑93 (MQ=255)
tCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTc > 1:169841/1‑93 (MQ=255)
tCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTc > 2:238925/1‑93 (MQ=255)
tCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTc < 2:2406717/93‑1 (MQ=255)
tCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTc > 1:1054836/1‑93 (MQ=255)
cTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCt < 2:2931941/93‑1 (MQ=255)
ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg < 1:491688/93‑1 (MQ=255)
ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg > 2:2785593/1‑93 (MQ=255)
ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg < 1:2870309/93‑1 (MQ=255)
ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg < 1:4050459/93‑1 (MQ=255)
tGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaa < 2:1745152/93‑1 (MQ=255)
tGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGCCGGGAGAAGCGCTTGGTCCTGTTCTGGaa > 1:2080810/1‑93 (MQ=255)
gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa < 1:4282405/93‑1 (MQ=255)
ggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc > 2:2206543/1‑93 (MQ=255)
ggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGGAGAAGCGCTTGGTCCTGTTCTGGAAAGc > 1:37578/1‑93 (MQ=255)
gcgTGGTGTCGATGGGAAATCCGCACTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc > 2:3959961/1‑93 (MQ=255)
cgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCa > 1:954656/1‑93 (MQ=255)
gtggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAc < 2:781964/93‑1 (MQ=255)
gtggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAc < 2:3409869/93‑1 (MQ=255)
tgtgtCGATGGGAAATCCGCATTGCGTGATTCGGGGCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGa < 1:67660/92‑1 (MQ=255)
gtgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg < 2:3831249/93‑1 (MQ=255)
gtgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg > 1:3499459/1‑93 (MQ=255)
gtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCg < 2:230916/93‑1 (MQ=255)
gtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCAACGacct > 1:2584749/1‑90 (MQ=255)
gtCGATGCGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCg < 1:2314554/93‑1 (MQ=255)
tCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt < 1:1016340/93‑1 (MQ=255)
gcGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt < 2:1455295/92‑1 (MQ=255)
cGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt < 1:1667991/93‑1 (MQ=255)
gATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGttt < 1:2854782/93‑1 (MQ=255)
gATGGGAAATCCGCATTGCGTGATTCGGGGCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGttt < 2:643062/93‑1 (MQ=255)
tGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGTAAAGCCACGAGCGTTTTc < 1:1459610/93‑1 (MQ=255)
gggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc > 1:1586164/1‑93 (MQ=255)
gggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc < 1:1141635/93‑1 (MQ=255)
ggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg > 1:395359/1‑93 (MQ=255)
aaaTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGa < 2:2531624/93‑1 (MQ=255)
aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc < 1:4006534/93‑1 (MQ=255)
aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc < 2:1725919/93‑1 (MQ=255)
tCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgtg > 2:123181/1‑91 (MQ=255)
tCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcg > 2:2087631/1‑93 (MQ=255)
ccGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc < 1:1420926/93‑1 (MQ=255)
ccGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc < 1:4343613/93‑1 (MQ=255)
ccGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc < 2:715247/93‑1 (MQ=255)
gCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcgc > 2:494297/1‑93 (MQ=255)
aTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa > 1:723582/1‑93 (MQ=255)
atGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGGGTTTTCCGGAGCGCGCCaa < 2:4583257/92‑1 (MQ=255)
tGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAat < 1:249611/93‑1 (MQ=255)
cGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatat < 1:2597833/93‑1 (MQ=255)
gTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc < 1:3039460/93‑1 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg < 2:3776252/93‑1 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg > 2:537892/1‑93 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg < 1:364833/93‑1 (MQ=255)
tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg < 1:709157/93‑1 (MQ=255)
aTTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGt < 1:1983960/93‑1 (MQ=255)
aTTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGt < 2:140940/93‑1 (MQ=255)
ttCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt < 1:1860384/93‑1 (MQ=255)
ttCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt < 1:1100488/93‑1 (MQ=255)
|
AAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTT > NC_000913/3992774‑3992951
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT > NC_000913/3992769‑3992955
|
CTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCG > SRR4302535.1203089/1‑94 (MQ=60)
TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG > SRR4302535.3034837/1‑94 (MQ=60)
TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG > SRR4302535.4330088/1‑94 (MQ=60)
TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG > SRR4302535.3915898/1‑94 (MQ=60)
TAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGG > SRR4302535.797803/1‑94 (MQ=60)
CAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTC > SRR4302535.403374/1‑94 (MQ=60)
CAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTC > SRR4302535.4606229/1‑94 (MQ=60)
CAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTC > SRR4302535.2272409/1‑94 (MQ=60)
CAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTC > SRR4302535.3392162/1‑94 (MQ=60)
AAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCG > SRR4302535.2879894/1‑94 (MQ=60)
AAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGA > SRR4302535.1096112/1‑94 (MQ=60)
AAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGA > SRR4302535.4323091/1‑94 (MQ=60)
AGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGAT > SRR4302535.1188841/1‑94 (MQ=60)
GCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATG < SRR4302535.3567835/94‑1 (MQ=60)
ACGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATG < SRR4302535.2993135/94‑1 (MQ=60)
CGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGA > SRR4302535.2286458/1‑94 (MQ=60)
GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT > SRR4302535.719461/1‑94 (MQ=60)
GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT > SRR4302535.1746804/1‑94 (MQ=60)
GGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGAT > SRR4302535.447142/1‑94 (MQ=60)
GAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATG < SRR4302535.2667702/94‑1 (MQ=60)
AAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGT < SRR4302535.4172970/94‑1 (MQ=60)
AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC < SRR4302535.490567/94‑1 (MQ=60)
AAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTC > SRR4302535.545821/1‑94 (MQ=60)
AAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCG < SRR4302535.450541/94‑1 (MQ=60)
AGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGTATTGCGTGATTCGGGTCGATGATGTCGA < SRR4302535.2680276/94‑1 (MQ=60)
GACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAT > SRR4302535.3109320/1‑94 (MQ=60)
GACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGAA > SRR4302535.2253249/1‑94 (MQ=60)
ACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATA > SRR4302535.1272880/1‑94 (MQ=60)
ACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATA > SRR4302535.2945290/1‑94 (MQ=60)
CCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAC < SRR4302535.1486826/94‑1 (MQ=60)
CCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAC < SRR4302535.4470133/94‑1 (MQ=60)
CCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATAC > SRR4302535.2063846/1‑94 (MQ=60)
CTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACC > SRR4302535.3242767/1‑94 (MQ=60)
ATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGC > SRR4302535.913235/1‑94 (MQ=60)
ATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGC > SRR4302535.3449090/1‑94 (MQ=60)
TATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCG > SRR4302535.2847336/1‑94 (MQ=60)
TTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGC > SRR4302535.3278080/1‑94 (MQ=60)
TTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGC > SRR4302535.3002284/1‑94 (MQ=60)
CGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAG < SRR4302535.3022788/94‑1 (MQ=60)
CGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAG > SRR4302535.4188840/1‑94 (MQ=60)
CGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAG > SRR4302535.693392/1‑94 (MQ=60)
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG < SRR4302535.2609785/94‑1 (MQ=60)
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG < SRR4302535.1667642/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGcagc > SRR4302535.321035/1‑90 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302535.3420619/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302535.2300831/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302535.4155205/94‑1 (MQ=60)
CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG < SRR4302535.1358051/94‑1 (MQ=60)
CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG > SRR4302535.2858521/1‑94 (MQ=60)
CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG < SRR4302535.1709155/94‑1 (MQ=60)
GCCGAGCAGACAATCTTATGCGGCGTGGTGTTGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGC > SRR4302535.670552/1‑94 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT > SRR4302535.1244069/1‑94 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT > SRR4302535.2461955/1‑94 (MQ=60)
CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT > SRR4302535.3675976/1‑94 (MQ=60)
GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG < SRR4302535.1040918/94‑1 (MQ=60)
GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG < SRR4302535.1959399/94‑1 (MQ=60)
CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACNGCGGCGGTAGAAGCGNTNGNTC > SRR4302535.1973000/1‑94 (MQ=60)
CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC > SRR4302535.1841236/1‑94 (MQ=60)
CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC < SRR4302535.298851/94‑1 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGCTGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302535.2364354/1‑94 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC < SRR4302535.1511844/94‑1 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302535.543552/1‑94 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302535.1182616/1‑94 (MQ=60)
ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG < SRR4302535.2220279/94‑1 (MQ=60)
CAATCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT < SRR4302535.660156/94‑1 (MQ=60)
AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT < SRR4302535.1795262/94‑1 (MQ=60)
AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT > SRR4302535.3358487/1‑94 (MQ=60)
AATCTTAGGCGGCGTTGTGTCGATGGGAAATCCGCCTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT < SRR4302535.55440/94‑1 (MQ=60)
ATCTTATGCGGCGTGGTGTCGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTC > SRR4302535.171019/1‑94 (MQ=60)
ATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTC > SRR4302535.1062337/1‑94 (MQ=60)
CTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATCCCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTG < SRR4302535.1586450/94‑1 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG < SRR4302535.495136/94‑1 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG < SRR4302535.2890644/94‑1 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG > SRR4302535.1138126/1‑94 (MQ=60)
TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG < SRR4302535.4078189/94‑1 (MQ=60)
TATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGA > SRR4302535.697818/1‑94 (MQ=60)
ATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGCCGGGAGAAGCGCTTGGTCCTGTTCTGGAA > SRR4302535.2095802/1‑94 (MQ=60)
TGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAA < SRR4302535.3912347/94‑1 (MQ=60)
GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG < SRR4302535.4311703/94‑1 (MQ=60)
GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG < SRR4302535.3590288/94‑1 (MQ=60)
CGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGGAGAAGCGCTTGGTCCTGTTCTGGAAAGC > SRR4302535.37867/1‑94 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA < SRR4302535.3064831/94‑1 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA > SRR4302535.961422/1‑94 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA < SRR4302535.4102420/94‑1 (MQ=60)
CGTGGTGTCGATGGGAAATCCGCATTGGGTGATTCGGGTCGATGATGTCGATAACGCGGCGGTAGAAGCGCTTGGTCGTGTTCTGGAAAGCacc > SRR4302535.1253718/1‑91 (MQ=60)
CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC > SRR4302535.403766/1‑94 (MQ=60)
TGGTGTCGATGGGAAATCCGCAGTGCGTGATTCGGGGCGATGATGTCGATACCGCGGCGGTATAAGCGCTTGGTCCTGTTCTGGAAAGCaacag > SRR4302535.991046/1‑89 (MQ=60)
TGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGGCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG < SRR4302535.68164/94‑1 (MQ=60)
GGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG > SRR4302535.3523789/1‑94 (MQ=60)
TGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCaacgacct > SRR4302535.2603314/1‑86 (MQ=60)
TGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGAGGATGGCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGTAAGCCACGAGCT > SRR4302535.4179108/1‑94 (MQ=60)
GTCGATGCGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGT < SRR4302535.2331114/94‑1 (MQ=60)
TCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTT < SRR4302535.1023564/94‑1 (MQ=60)
CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT < SRR4302535.1680062/94‑1 (MQ=60)
GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTTGTCCTGTTCTGGAAAGCCACGAGCGTTTT < SRR4302535.2701148/94‑1 (MQ=60)
GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTT < SRR4302535.2875005/94‑1 (MQ=60)
ATGGGAAATCGGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGGGTTTTC > SRR4302535.2321075/1‑94 (MQ=60)
TGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGTAAAGCCACGAGCGTTTTCC < SRR4302535.1470068/94‑1 (MQ=60)
TGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCC > SRR4302535.1597610/1‑94 (MQ=60)
GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG > SRR4302535.398129/1‑94 (MQ=60)
GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG < SRR4302535.1149772/94‑1 (MQ=60)
GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG > SRR4302535.2073549/1‑94 (MQ=60)
GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG < SRR4302535.2588383/94‑1 (MQ=60)
AAGTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG < SRR4302535.1422851/94‑1 (MQ=60)
AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCTGAG > SRR4302535.1468684/1‑94 (MQ=60)
ATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG < SRR4302535.4033946/94‑1 (MQ=60)
CCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG < SRR4302535.1431070/94‑1 (MQ=60)
CCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG < SRR4302535.4373326/94‑1 (MQ=60)
CCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG > SRR4302535.1638495/1‑94 (MQ=60)
CGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGC > SRR4302535.4693559/1‑94 (MQ=60)
CGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGACACGAGCGTTTTCCGGAGCGCGC > SRR4302535.2859012/1‑94 (MQ=60)
CATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA > SRR4302535.728661/1‑94 (MQ=60)
ATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAA > SRR4302535.2224868/1‑94 (MQ=60)
TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT < SRR4302535.214446/94‑1 (MQ=60)
TGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATA < SRR4302535.251331/94‑1 (MQ=60)
TGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATA > SRR4302535.632262/1‑94 (MQ=60)
GCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT < SRR4302535.3354492/94‑1 (MQ=60)
gtgGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC < SRR4302535.499955/91‑1 (MQ=60)
CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC < SRR4302535.2616491/94‑1 (MQ=60)
GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG < SRR4302535.3060747/94‑1 (MQ=60)
TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG < SRR4302535.714135/94‑1 (MQ=60)
TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG < SRR4302535.367343/94‑1 (MQ=60)
ATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTT < SRR4302535.1998243/94‑1 (MQ=60)
TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT < SRR4302535.1108347/94‑1 (MQ=60)
TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT < SRR4302535.1873794/94‑1 (MQ=60)
CGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTA > SRR4302535.1598498/1‑94 (MQ=60)
GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT < SRR4302535.683992/94‑1 (MQ=60)
GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT < SRR4302535.1617675/94‑1 (MQ=60)
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CTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT > NC_000913/3992769‑3992955
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
