Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,992,894 A→G T175A (ACG→GCG)  dapF → diaminopimelate epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,992,8940AG99.7% 1044.8 / NA 333T175A (ACG→GCG) dapFdiaminopimelate epimerase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (145/186);  total (146/187)
Fisher's exact test for biased strand distribution p-value = 4.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 355 total aligned reads displayed.

CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT  >  NC_000913/3992805‑3992983
                                                                                         |                                                                                         
ccgAGCGGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAgcgc                                                                                        >  1:963400/1‑93 (MQ=255)
 cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt                                                                                       >  1:4802449/1‑93 (MQ=255)
 cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt                                                                                       >  2:3162827/1‑93 (MQ=255)
  gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt                                                                                      <  2:6959193/93‑1 (MQ=255)
   aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg                                                                                     >  1:745954/1‑93 (MQ=255)
   aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg                                                                                     <  2:2783735/93‑1 (MQ=255)
    gCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTgg                                                                                    >  2:4428623/1‑93 (MQ=255)
     cAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGt                                                                                   >  2:6936033/1‑93 (MQ=255)
      aGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTc                                                                                  >  1:1654814/1‑93 (MQ=255)
       gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 <  2:6842241/93‑1 (MQ=255)
       gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 >  2:5937040/1‑93 (MQ=255)
       gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 >  2:1885305/1‑93 (MQ=255)
       gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc                                                                                 >  1:3077174/1‑93 (MQ=255)
        aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt                                                                                >  1:5426453/1‑93 (MQ=255)
        aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt                                                                                >  1:2926604/1‑93 (MQ=255)
        aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt                                                                                <  1:556445/93‑1 (MQ=255)
         cAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTg                                                                               <  1:4024014/93‑1 (MQ=255)
         cAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTg                                                                               <  1:2770159/93‑1 (MQ=255)
         cAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGCCGATGATGTCGATACCGCGGCGGAAGAAGCGCTTGGTCCtt                                                                               >  1:5501476/1‑92 (MQ=255)
          aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt                                                                              >  2:3181231/1‑93 (MQ=255)
              ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                                                          >  1:5031846/1‑93 (MQ=255)
              ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                                                          <  1:7156551/93‑1 (MQ=255)
              ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                                                          <  2:4949147/93‑1 (MQ=255)
              ttATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTg                                                                          >  2:5698940/1‑93 (MQ=255)
                 tGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaa                                                                       >  2:2143451/1‑93 (MQ=255)
                     gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc                                                                   >  1:1526847/1‑93 (MQ=255)
                      cgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCa                                                                  >  1:3771614/1‑93 (MQ=255)
                       gtggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAc                                                                 >  2:7763394/1‑93 (MQ=255)
                         ggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGa                                                               <  1:6310355/93‑1 (MQ=255)
                         ggtgTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGa                                                               <  2:5116973/93‑1 (MQ=255)
                          gtgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg                                                              >  2:2831152/1‑93 (MQ=255)
                          gtgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg                                                              <  1:6634044/93‑1 (MQ=255)
                          gtgtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATAATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg                                                              <  1:5461214/93‑1 (MQ=255)
                            gtCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCg                                                            <  2:7259900/93‑1 (MQ=255)
                             tCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt                                                           <  2:4681940/93‑1 (MQ=255)
                              cGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt                                                          <  1:1011457/93‑1 (MQ=255)
                                 tGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc                                                       >  2:2313264/1‑93 (MQ=255)
                                 tGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc                                                       >  1:3667161/1‑93 (MQ=255)
                                 tGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc                                                       >  1:5800279/1‑93 (MQ=255)
                                 tGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTc                                                       >  1:6852403/1‑93 (MQ=255)
                                  gggAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTcc                                                      <  1:2214646/93‑1 (MQ=255)
                                   ggAAATCCGCATTTCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                                                     >  2:6258/1‑93 (MQ=255)
                                   ggAAAGCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg                                                     <  1:560895/93‑1 (MQ=255)
                                    gAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTGCgg                                                    <  2:5316674/93‑1 (MQ=255)
                                    gAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCgg                                                    >  1:4368724/1‑93 (MQ=255)
                                     aaaTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGGAAGCCACGAGCGTTTTCCggg                                                   >  2:1546802/1‑92 (MQ=255)
                                      aaTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAg                                                  <  2:3651087/93‑1 (MQ=255)
                                       aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc                                                 >  2:5475690/1‑93 (MQ=255)
                                       aTCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc                                                 <  1:5311730/93‑1 (MQ=255)
                                        tCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcg                                                >  2:4750992/1‑93 (MQ=255)
                                         gcgaaTTGCGTGATTCGGGTCGATGAGTTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc                                               <  1:780199/89‑1 (MQ=255)
                                         ccGCATTGCGTGATTCGGGTCGGTGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgc                                               <  1:2484867/93‑1 (MQ=255)
                                          cGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcgcg                                              >  2:2050972/1‑93 (MQ=255)
                                            cATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGcc                                            <  1:4680312/93‑1 (MQ=255)
                                             aTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa                                           >  2:3371208/1‑93 (MQ=255)
                                             aTTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa                                           >  1:213083/1‑93 (MQ=255)
                                              ttGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa                                          >  1:1425699/1‑93 (MQ=255)
                                              ttGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa                                          <  1:1918278/93‑1 (MQ=255)
                                              ttGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa                                          >  2:2276662/1‑93 (MQ=255)
                                              ttGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa                                          <  1:5216971/93‑1 (MQ=255)
                                               tGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAat                                         <  1:4881495/93‑1 (MQ=255)
                                                gCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAata                                        <  2:2499726/93‑1 (MQ=255)
                                                 cGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatat                                       >  2:1110657/1‑93 (MQ=255)
                                                  gTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc                                      >  2:4089355/1‑93 (MQ=255)
                                                  gTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc                                      <  1:1159215/93‑1 (MQ=255)
                                                   tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTGCGGAGCGCGCCAATATCg                                     >  1:4216829/1‑93 (MQ=255)
                                                   tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg                                     >  1:2392569/1‑93 (MQ=255)
                                                   tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg                                     <  2:1368256/93‑1 (MQ=255)
                                                   tGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg                                     >  1:3947031/1‑93 (MQ=255)
                                                    gATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCgg                                    >  1:6554427/1‑93 (MQ=255)
                                                    gATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCgg                                    >  1:4522139/1‑93 (MQ=255)
                                                    gATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCgg                                    >  1:6052021/1‑93 (MQ=255)
                                                      ttCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt                                  <  2:6505750/93‑1 (MQ=255)
                                                         gggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa                               <  1:109865/92‑1 (MQ=255)
                                                            tCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGc                            >  1:5282945/1‑93 (MQ=255)
                                                              gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa                          >  1:1828854/1‑93 (MQ=255)
                                                              gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa                          >  1:3481182/1‑93 (MQ=255)
                                                              gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa                          <  2:6425987/93‑1 (MQ=255)
                                                               atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg                         >  2:3806540/1‑93 (MQ=255)
                                                               atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg                         >  1:4383984/1‑93 (MQ=255)
                                                                tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt                        <  2:6655616/93‑1 (MQ=255)
                                                                tgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt                        >  2:2959009/1‑93 (MQ=255)
                                                                tgatgGCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGt                        <  1:4103394/93‑1 (MQ=255)
                                                                    gTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGtt                    <  1:5868560/93‑1 (MQ=255)
                                                                     tCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTa                   <  1:3011302/93‑1 (MQ=255)
                                                                      cGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTaa                  <  2:906303/93‑1 (MQ=255)
                                                                      cGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTaa                  <  2:4353212/93‑1 (MQ=255)
                                                                       gATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAg                 <  2:7605773/93‑1 (MQ=255)
                                                                        aTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc                <  2:5085294/93‑1 (MQ=255)
                                                                        aTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc                <  2:4489555/93‑1 (MQ=255)
                                                                        aTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc                <  2:3892225/93‑1 (MQ=255)
                                                                        aTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc                <  2:7393585/93‑1 (MQ=255)
                                                                          aCCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgcgc              <  2:4187858/93‑1 (MQ=255)
                                                                             gcggcgGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAg           <  1:3189778/93‑1 (MQ=255)
                                                                               ggcggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCa         <  1:6087143/93‑1 (MQ=255)
                                                                                 cggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCata       <  1:2847499/93‑1 (MQ=255)
                                                                                   gTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAtt     <  2:2561441/93‑1 (MQ=255)
                                                                                     aGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCg   <  2:4794017/93‑1 (MQ=255)
                                                                                      gAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGt  <  1:3901820/93‑1 (MQ=255)
                                                                                      gAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGt  <  1:2572933/93‑1 (MQ=255)
                                                                                         |                                                                                         
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT  >  NC_000913/3992805‑3992983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC  >  NC_000913/3992801‑3992987
                                                                                              |                                                                                             
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG                                                                                               <  SRR4302543.3599038/94‑1 (MQ=60)
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAG                                                                                               <  SRR4302543.3339188/94‑1 (MQ=60)
 CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGC                                                                                              <  SRR4302543.3789814/94‑1 (MQ=60)
  CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG                                                                                             <  SRR4302543.3473887/94‑1 (MQ=60)
  CGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCG                                                                                             <  SRR4302543.6842275/94‑1 (MQ=60)
   GCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGC                                                                                            >  SRR4302543.1067520/1‑94 (MQ=60)
    CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT                                                                                           >  SRR4302543.4846335/1‑94 (MQ=60)
     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                                                          >  SRR4302543.451361/1‑94 (MQ=60)
     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                                                          >  SRR4302543.6671408/1‑94 (MQ=60)
     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                                                          >  SRR4302543.5565496/1‑94 (MQ=60)
     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                                                          <  SRR4302543.4894320/94‑1 (MQ=60)
     CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT                                                                                          <  SRR4302543.7936244/94‑1 (MQ=60)
      GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG                                                                                         >  SRR4302543.752591/1‑94 (MQ=60)
      GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG                                                                                         >  SRR4302543.6121613/1‑94 (MQ=60)
       AGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGG                                                                                        >  SRR4302543.1589099/1‑94 (MQ=60)
         CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC                                                                                      >  SRR4302543.5328370/1‑94 (MQ=60)
         CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC                                                                                      >  SRR4302543.2928627/1‑94 (MQ=60)
         CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC                                                                                      >  SRR4302543.1669626/1‑94 (MQ=60)
          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                                                     <  SRR4302543.6678017/94‑1 (MQ=60)
          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                                                     >  SRR4302543.5204179/1‑94 (MQ=60)
          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                                                     >  SRR4302543.6847664/1‑94 (MQ=60)
          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                                                     <  SRR4302543.6678018/94‑1 (MQ=60)
          AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC                                                                                     >  SRR4302543.3104850/1‑94 (MQ=60)
           GACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCT                                                                                    <  SRR4302543.463807/94‑1 (MQ=60)
           GACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCT                                                                                    >  SRR4302543.2953188/1‑94 (MQ=60)
           GACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCT                                                                                    >  SRR4302543.5475769/1‑94 (MQ=60)
            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTT                                                                                   >  SRR4302543.2144981/1‑94 (MQ=60)
            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG                                                                                   <  SRR4302543.561551/94‑1 (MQ=60)
            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG                                                                                   <  SRR4302543.561550/94‑1 (MQ=60)
            ACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGCCGATGATGTCGATACCGCGGCGGAAGAAGCGCTTGGTCCTT                                                                                   >  SRR4302543.5551403/1‑94 (MQ=60)
            ACAATCTTATGCGGCGTGGCGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTG                                                                                   >  SRR4302543.432251/1‑94 (MQ=60)
             caagtTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                                                  <  SRR4302543.4059964/89‑1 (MQ=60)
             CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                                                  <  SRR4302543.2795371/94‑1 (MQ=60)
             CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                                                  <  SRR4302543.4059965/94‑1 (MQ=60)
             CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTAGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT                                                                                  <  SRR4302543.5455383/94‑1 (MQ=60)
              AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT                                                                                 >  SRR4302543.325294/1‑94 (MQ=60)
              AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT                                                                                 <  SRR4302543.2537350/94‑1 (MQ=60)
                 CTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTG                                                                              >  SRR4302543.7885211/1‑94 (MQ=60)
                 CTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTG                                                                              >  SRR4302543.5077620/1‑94 (MQ=60)
                  TTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGG                                                                             <  SRR4302543.7226104/94‑1 (MQ=60)
                   TATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGA                                                                            <  SRR4302543.1044889/94‑1 (MQ=60)
                    ATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAA                                                                           >  SRR4302543.6613771/1‑94 (MQ=60)
                    ATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAA                                                                           >  SRR4302543.5587452/1‑94 (MQ=60)
                      GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG                                                                         <  SRR4302543.2574564/94‑1 (MQ=60)
                      GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG                                                                         <  SRR4302543.2071158/94‑1 (MQ=60)
                        GGCGTGGTTTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCC                                                                       <  SRR4302543.381056/94‑1 (MQ=60)
                        GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCC                                                                       <  SRR4302543.381055/94‑1 (MQ=60)
                        GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCC                                                                       >  SRR4302543.1540550/1‑94 (MQ=60)
                        GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGGAGAAGCGCTTGGGCCTGTTCTGGAAAGGC                                                                       >  SRR4302543.5549364/1‑94 (MQ=60)
                         GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA                                                                      >  SRR4302543.3804819/1‑94 (MQ=60)
                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                                                     <  SRR4302543.7646702/94‑1 (MQ=60)
                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                                                     <  SRR4302543.1953251/94‑1 (MQ=60)
                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                                                     <  SRR4302543.7039349/94‑1 (MQ=60)
                          CGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAC                                                                     >  SRR4302543.5315400/1‑94 (MQ=60)
                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                                                    >  SRR4302543.413555/1‑94 (MQ=60)
                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                                                    <  SRR4302543.4382853/94‑1 (MQ=60)
                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                                                    <  SRR4302543.5998684/94‑1 (MQ=60)
                           GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG                                                                    >  SRR4302543.3912356/1‑94 (MQ=60)
                            TGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAACGCCACGA                                                                   >  SRR4302543.29223/1‑94 (MQ=60)
                            TGGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGA                                                                   >  SRR4302543.2975316/1‑94 (MQ=60)
                             GGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG                                                                  <  SRR4302543.6369701/94‑1 (MQ=60)
                             GGTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG                                                                  <  SRR4302543.4734647/94‑1 (MQ=60)
                              GTGTGGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC                                                                 <  SRR4302543.5267512/94‑1 (MQ=60)
                              GTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC                                                                 >  SRR4302543.369027/1‑94 (MQ=60)
                              GTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC                                                                 <  SRR4302543.6696638/94‑1 (MQ=60)
                              GTGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATAATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC                                                                 <  SRR4302543.5510711/94‑1 (MQ=60)
                               TGTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCG                                                                <  SRR4302543.2412426/94‑1 (MQ=60)
                                GTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGT                                                               >  SRR4302543.3069945/1‑94 (MQ=60)
                                GTCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGT                                                               <  SRR4302543.3116653/94‑1 (MQ=60)
                                 TCGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTT                                                              <  SRR4302543.496772/94‑1 (MQ=60)
                                  CGATGGTAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                                                             <  SRR4302543.1020405/94‑1 (MQ=60)
                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                                                             >  SRR4302543.5744528/1‑94 (MQ=60)
                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                                                             >  SRR4302543.4254550/1‑94 (MQ=60)
                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                                                             <  SRR4302543.4591099/94‑1 (MQ=60)
                                  CGATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT                                                             >  SRR4302543.7939230/1‑94 (MQ=60)
                                   GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTT                                                            <  SRR4302543.7671409/94‑1 (MQ=60)
                                   GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTT                                                            >  SRR4302543.116228/1‑94 (MQ=60)
                                   GATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTT                                                            <  SRR4302543.421189/94‑1 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGCAGCGCTTGGTCCTGTTCTGGACAGCCACGAGCGTTTTC                                                           >  SRR4302543.5484333/1‑94 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                                                           >  SRR4302543.5853042/1‑94 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                                                           >  SRR4302543.3699360/1‑94 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                                                           >  SRR4302543.3801809/1‑94 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                                                           >  SRR4302543.6917033/1‑94 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                                                           <  SRR4302543.2600465/94‑1 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                                                           <  SRR4302543.4058430/94‑1 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTC                                                           >  SRR4302543.1495619/1‑94 (MQ=60)
                                    ATGGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGCTTTC                                                           >  SRR4302543.6007422/1‑94 (MQ=60)
                                     ggagaacccctgtttgcgtgttcggGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCC                                                          <  SRR4302543.4410027/69‑1 (MQ=60)
                                      GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG                                                         <  SRR4302543.5414081/94‑1 (MQ=60)
                                      GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG                                                         >  SRR4302543.4414306/1‑94 (MQ=60)
                                      GGGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG                                                         <  SRR4302543.2234606/94‑1 (MQ=60)
                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGCGAGTTTTCCGG                                                        >  SRR4302543.4408294/1‑94 (MQ=60)
                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                                                        <  SRR4302543.566032/94‑1 (MQ=60)
                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                                                        <  SRR4302543.2872508/94‑1 (MQ=60)
                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                                                        <  SRR4302543.2213450/94‑1 (MQ=60)
                                       GGAAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                                                        >  SRR4302543.4408293/1‑94 (MQ=60)
                                       GGAAAGCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGG                                                        <  SRR4302543.566033/94‑1 (MQ=60)
                                         AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGcgg                                                      >  SRR4302543.2437445/1‑91 (MQ=60)
                                         AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG                                                      <  SRR4302543.3062734/94‑1 (MQ=60)
                                         AAATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG                                                      >  SRR4302543.6361642/1‑94 (MQ=60)
                                          AATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGC                                                     >  SRR4302543.1463255/1‑94 (MQ=60)
                                          AATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGC                                                     >  SRR4302543.6462564/1‑94 (MQ=60)
                                           ATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG                                                    >  SRR4302543.4904629/1‑94 (MQ=60)
                                           ATCCGCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG                                                    <  SRR4302543.5359710/94‑1 (MQ=60)
                                             gcgaATTGCGTGATTCGGGTCGATGAGTTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG                                                  <  SRR4302543.787054/90‑1 (MQ=60)
                                             CCGCATTGCGTGATTCGGGTCGGTGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG                                                  <  SRR4302543.2507372/94‑1 (MQ=60)
                                               GCATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCC                                                <  SRR4302543.6933006/94‑1 (MQ=60)
                                                CATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA                                               <  SRR4302543.4722988/94‑1 (MQ=60)
                                                CATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA                                               <  SRR4302543.452751/94‑1 (MQ=60)
                                                CATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA                                               >  SRR4302543.214903/1‑94 (MQ=60)
                                                 ATTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAA                                              >  SRR4302543.1438600/1‑94 (MQ=60)
                                                  TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT                                             <  SRR4302543.1935572/94‑1 (MQ=60)
                                                  TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT                                             <  SRR4302543.1443166/94‑1 (MQ=60)
                                                  TTGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT                                             <  SRR4302543.5263967/94‑1 (MQ=60)
                                                   TGCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATA                                            <  SRR4302543.4925983/94‑1 (MQ=60)
                                                    GCGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT                                           <  SRR4302543.5732000/94‑1 (MQ=60)
                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATG                                          >  SRR4302543.4772782/1‑94 (MQ=60)
                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC                                          <  SRR4302543.4593146/94‑1 (MQ=60)
                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC                                          <  SRR4302543.2162211/94‑1 (MQ=60)
                                                     CGTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC                                          >  SRR4302543.4772783/1‑94 (MQ=60)
                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTGCGGAGCGCGCCAATATCG                                         >  SRR4302543.4255062/1‑94 (MQ=60)
                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG                                         >  SRR4302543.3981923/1‑94 (MQ=60)
                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG                                         <  SRR4302543.1300838/94‑1 (MQ=60)
                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG                                         >  SRR4302543.3284557/1‑94 (MQ=60)
                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG                                         <  SRR4302543.1169771/94‑1 (MQ=60)
                                                      GTGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG                                         >  SRR4302543.2414217/1‑94 (MQ=60)
                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG                                        >  SRR4302543.5624765/1‑94 (MQ=60)
                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG                                        >  SRR4302543.4563269/1‑94 (MQ=60)
                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG                                        >  SRR4302543.6616110/1‑94 (MQ=60)
                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG                                        <  SRR4302543.5801776/94‑1 (MQ=60)
                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG                                        >  SRR4302543.6109309/1‑94 (MQ=60)
                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG                                        >  SRR4302543.5517072/1‑94 (MQ=60)
                                                       TGATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCCCCAATATCGG                                        >  SRR4302543.6109310/1‑94 (MQ=60)
                                                         ATTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTT                                      >  SRR4302543.7400186/1‑94 (MQ=60)
                                                          TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT                                     <  SRR4302543.1915650/94‑1 (MQ=60)
                                                          TTCGGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTT                                     <  SRR4302543.6006248/94‑1 (MQ=60)
                                                             GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT                                  <  SRR4302543.110868/94‑1 (MQ=60)
                                                             GGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT                                  <  SRR4302543.3952006/94‑1 (MQ=60)
                                                              GGTGCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT                                  <  SRR4302543.110869/94‑1 (MQ=60)
                                                              GGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATG                                 <  SRR4302543.3038175/94‑1 (MQ=60)
                                                               GTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGC                                >  SRR4302543.5330623/1‑94 (MQ=60)
                                                               GTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGC                                >  SRR4302543.5330622/1‑94 (MQ=60)
                                                               GTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGC                                >  SRR4302543.5208042/1‑94 (MQ=60)
                                                               GTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCAACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGC                                >  SRR4302543.5456675/1‑94 (MQ=60)
                                                                  CGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAA                              >  SRR4302543.1845281/1‑94 (MQ=60)
                                                                  CGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAA                              >  SRR4302543.3512361/1‑94 (MQ=60)
                                                                  CGATGATGTAGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGCAAGCCACGCGCGTTTTCCGGAGCGCGACAATATCGGTTTTATGCAA                              <  SRR4302543.4050496/94‑1 (MQ=60)
                                                                   GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAG                             <  SRR4302543.5353034/94‑1 (MQ=60)
                                                                   GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAG                             >  SRR4302543.4079039/1‑94 (MQ=60)
                                                                   GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAG                             >  SRR4302543.4423729/1‑94 (MQ=60)
                                                                   GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAG                             <  SRR4302543.2393172/94‑1 (MQ=60)
                                                                    ATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGT                            <  SRR4302543.6953844/94‑1 (MQ=60)
                                                                    ATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGT                            <  SRR4302543.2435327/94‑1 (MQ=60)
                                                                    ATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGT                            >  SRR4302543.3088239/1‑94 (MQ=60)
                                                                    ATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGT                            <  SRR4302543.2644679/94‑1 (MQ=60)
                                                                     TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG                           <  SRR4302543.1151469/94‑1 (MQ=60)
                                                                     TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG                           <  SRR4302543.1710896/94‑1 (MQ=60)
                                                                     TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG                           <  SRR4302543.625197/94‑1 (MQ=60)
                                                                     TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG                           <  SRR4302543.6247643/94‑1 (MQ=60)
                                                                     TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG                           >  SRR4302543.3579234/1‑94 (MQ=60)
                                                                     TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG                           <  SRR4302543.2466571/94‑1 (MQ=60)
                                                                     TGATGGCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG                           <  SRR4302543.4140299/94‑1 (MQ=60)
                                                                      GATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCAAATATCGGTTTTATGCAAGTGG                          <  SRR4302543.4943640/94‑1 (MQ=60)
                                                                       ATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGT                         <  SRR4302543.3204787/94‑1 (MQ=60)
                                                                         GTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTA                       <  SRR4302543.5921993/94‑1 (MQ=60)
                                                                         GTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTA                       <  SRR4302543.7379050/94‑1 (MQ=60)
                                                                         GTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTA                       <  SRR4302543.2859523/94‑1 (MQ=60)
                                                                          TCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAA                      <  SRR4302543.5501738/94‑1 (MQ=60)
                                                                          TCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAA                      >  SRR4302543.1179505/1‑94 (MQ=60)
                                                                          TCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAA                      <  SRR4302543.3038570/94‑1 (MQ=60)
                                                                           CGATACCGCGGCGGTAGAATCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAG                     <  SRR4302543.2927940/94‑1 (MQ=60)
                                                                           CGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAG                     <  SRR4302543.172078/94‑1 (MQ=60)
                                                                            GATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGC                    <  SRR4302543.1812671/94‑1 (MQ=60)
                                                                            GATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGC                    <  SRR4302543.3981269/94‑1 (MQ=60)
                                                                             ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG                   >  SRR4302543.4950299/1‑94 (MQ=60)
                                                                             ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG                   <  SRR4302543.3398473/94‑1 (MQ=60)
                                                                             ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG                   >  SRR4302543.5897344/1‑94 (MQ=60)
                                                                                 CGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAG               >  SRR4302543.1855781/1‑94 (MQ=60)
                                                                                  GCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGC              <  SRR4302543.3218544/94‑1 (MQ=60)
                                                                                  GCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGC              <  SRR4302543.6778833/94‑1 (MQ=60)
                                                                                  GCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGC              >  SRR4302543.1557786/1‑94 (MQ=60)
                                                                                   CGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCA             <  SRR4302543.4044809/94‑1 (MQ=60)
                                                                                    GGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCAT            <  SRR4302543.6144837/94‑1 (MQ=60)
                                                                                      CGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAT          <  SRR4302543.278349/94‑1 (MQ=60)
                                                                                      CGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAT          >  SRR4302543.3653524/1‑94 (MQ=60)
                                                                                      CGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAT          <  SRR4302543.2873498/94‑1 (MQ=60)
                                                                                        GTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTC        <  SRR4302543.7272450/94‑1 (MQ=60)
                                                                                          AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATTCAAGTGGTTAAGCGCGAGCATATTCGT      <  SRR4302543.2243403/94‑1 (MQ=60)
                                                                                          AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT      >  SRR4302543.4422477/1‑94 (MQ=60)
                                                                                          AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT      <  SRR4302543.5518721/94‑1 (MQ=60)
                                                                                          AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT      >  SRR4302543.3741166/1‑94 (MQ=60)
                                                                                          AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT      >  SRR4302543.5881889/1‑94 (MQ=60)
                                                                                           GAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTT     <  SRR4302543.3936275/94‑1 (MQ=60)
                                                                                           GAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTT     <  SRR4302543.2596394/94‑1 (MQ=60)
                                                                                            AAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCTTTTTCCGAAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTT    <  SRR4302543.2493137/94‑1 (MQ=60)
                                                                                            AAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTT    >  SRR4302543.2449734/1‑94 (MQ=60)
                                                                                             AGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTA   >  SRR4302543.1561539/1‑94 (MQ=60)
                                                                                              GCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC  <  SRR4302543.6170521/94‑1 (MQ=60)
                                                                                              GCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC  <  SRR4302543.4175276/94‑1 (MQ=60)
                                                                                              GCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC  <  SRR4302543.3541601/94‑1 (MQ=60)
                                                                                              |                                                                                             
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTAC  >  NC_000913/3992801‑3992987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: